label
class label
2 classes
source_code
stringlengths
398
72.9k
00
Code Sample 1: @Override public void login() { loginsuccessful = false; try { HttpParams params = new BasicHttpParams(); params.setParameter("http.useragent", "Mozilla/5.0 (Windows; U; Windows NT 6.1; en-GB; rv:1.9.2) Gecko/20100115 Firefox/3.6"); DefaultHttpClient httpclient = new DefaultHttpClient(params); NULogger.getLogger().info("Trying to log in to HotFile"); HttpPost httppost = new HttpPost("http://www.hotfile.com/login.php"); httppost.setHeader("Referer", "http://www.hotfile.com/"); httppost.setHeader("Cache-Control", "max-age=0"); httppost.setHeader("Origin", "http://www.hotfile.com/"); httppost.setHeader("Accept", "application/xml,application/xhtml+xml,text/html;q=0.9,text/plain;q=0.8,image/png,*/*;q=0.5"); List<NameValuePair> formparams = new ArrayList<NameValuePair>(); formparams.add(new BasicNameValuePair("returnto", "%2F")); formparams.add(new BasicNameValuePair("user", getUsername())); formparams.add(new BasicNameValuePair("pass", getPassword())); UrlEncodedFormEntity entity = new UrlEncodedFormEntity(formparams, "UTF-8"); httppost.setEntity(entity); HttpResponse httpresponse = httpclient.execute(httppost); if (httpresponse.getFirstHeader("Set-Cookie") == null) { NULogger.getLogger().info("HotFile Login not successful"); loginsuccessful = false; username = ""; password = ""; JOptionPane.showMessageDialog(NeembuuUploader.getInstance(), "<html><b>" + HOSTNAME + "</b> " + TranslationProvider.get("neembuuuploader.accounts.loginerror") + "</html>", HOSTNAME, JOptionPane.WARNING_MESSAGE); AccountsManager.getInstance().setVisible(true); } else { Iterator<Cookie> it = httpclient.getCookieStore().getCookies().iterator(); while (it.hasNext()) { hfcookie = it.next(); if (hfcookie.getName().equals("auth")) { NULogger.getLogger().log(Level.INFO, "hotfile login successful auth:{0}", hfcookie.getValue()); loginsuccessful = true; HostsPanel.getInstance().hotFileCheckBox.setEnabled(true); username = getUsername(); password = getPassword(); break; } } } } catch (Exception ex) { NULogger.getLogger().log(Level.SEVERE, "{0}: Error in Hotfile Login", getClass().getName()); } } Code Sample 2: @Test public void testStandardTee() throws Exception { final byte[] test = "test".getBytes(); final InputStream source = new ByteArrayInputStream(test); final ByteArrayOutputStream destination1 = new ByteArrayOutputStream(); final ByteArrayOutputStream destination2 = new ByteArrayOutputStream(); final TeeOutputStream tee = new TeeOutputStream(destination1, destination2); org.apache.commons.io.IOUtils.copy(source, tee); tee.close(); assertArrayEquals("the two arrays are equals", test, destination1.toByteArray()); assertArrayEquals("the two arrays are equals", test, destination2.toByteArray()); assertEquals("byte count", test.length, tee.getSize()); }
00
Code Sample 1: public void addUser(String name, String unit, String organizeName, int userId, int orgId, String email) { Connection connection = null; PreparedStatement ps = null; DBOperation dbo = factory.createDBOperation(POOL_NAME); try { connection = dbo.getConnection(); ps = connection.prepareStatement(INSERT_USER); ps.setInt(1, AddrslistMainDao.getNewID()); ps.setInt(2, -100); ps.setString(3, name.substring(0, 1)); ps.setString(4, name.substring(1)); ps.setString(5, unit); ps.setString(6, organizeName); ps.setString(7, ""); ps.setString(8, email); ps.setString(9, ""); ps.setString(10, ""); ps.setString(11, ""); ps.setString(12, ""); ps.setString(13, ""); ps.setString(14, ""); ps.setString(15, ""); ps.setString(16, ""); ps.setString(17, ""); ps.setString(18, ""); ps.setInt(19, userId); ps.setInt(20, orgId); ps.executeUpdate(); connection.commit(); } catch (Exception e) { e.printStackTrace(); try { connection.rollback(); } catch (SQLException e1) { } } finally { try { ps.close(); connection.close(); dbo.close(); } catch (Exception e) { } } } Code Sample 2: public static byte[] loadFile(File file) throws IOException { BufferedInputStream in = null; ByteArrayOutputStream sink = null; try { in = new BufferedInputStream(new FileInputStream(file)); sink = new ByteArrayOutputStream(); IOUtils.copy(in, sink); return sink.toByteArray(); } finally { IOUtils.closeQuietly(in); IOUtils.closeQuietly(sink); } }
00
Code Sample 1: public void retrieveFiles() throws DataSyncException { try { ftp.connect(hostname, port); boolean success = ftp.login(username, password); log.info("FTP Login:" + success); if (success) { System.out.println(directory); ftp.changeWorkingDirectory(directory); ftp.setFileType(FTP.ASCII_FILE_TYPE); ftp.enterLocalPassiveMode(); ftp.setRemoteVerificationEnabled(false); FTPFile[] files = ftp.listFiles(); for (FTPFile file : files) { ftp.setFileType(file.getType()); log.debug(file.getName() + "," + file.getSize()); FileOutputStream output = new FileOutputStream(localDirectory + file.getName()); try { ftp.retrieveFile(file.getName(), output); } finally { IOUtils.closeQuietly(output); } } } } catch (Exception e) { throw new DataSyncException(e); } finally { try { ftp.disconnect(); } catch (IOException e) { } } } Code Sample 2: private String encryptPassword(String password) throws NoSuchAlgorithmException { MessageDigest encript = MessageDigest.getInstance("MD5"); encript.update(password.getBytes()); byte[] b = encript.digest(); int size = b.length; StringBuffer h = new StringBuffer(size); for (int i = 0; i < size; i++) { h.append(b[i]); } return h.toString(); }
00
Code Sample 1: public List<String> getFtpFileList(String serverIp, int port, String user, String password, String synchrnPath) throws Exception { List<String> list = new ArrayList<String>(); FTPClient ftpClient = new FTPClient(); ftpClient.setControlEncoding("euc-kr"); if (!EgovWebUtil.isIPAddress(serverIp)) { throw new RuntimeException("IP is needed. (" + serverIp + ")"); } InetAddress host = InetAddress.getByName(serverIp); ftpClient.connect(host, port); ftpClient.login(user, password); ftpClient.changeWorkingDirectory(synchrnPath); FTPFile[] fTPFile = ftpClient.listFiles(synchrnPath); for (int i = 0; i < fTPFile.length; i++) { list.add(fTPFile[i].getName()); } return list; } Code Sample 2: private long getRecordedSessionLength() { long lRet = -1; String strLength = this.applet.getParameter(Constants.PLAYBACK_MEETING_LENGTH_PARAM); if (null != strLength) { lRet = (new Long(strLength)).longValue(); } else { Properties recProps = new Properties(); try { URL urlProps = new URL(applet.getDocumentBase(), Constants.RECORDED_SESSION_INFO_PROPERTIES); recProps.load(urlProps.openStream()); lRet = (new Long(recProps.getProperty(Constants.PLAYBACK_MEETING_LENGTH_PARAM))).longValue(); } catch (Exception e) { e.printStackTrace(); } } return lRet; }
11
Code Sample 1: public static void copyFile(File sourceFile, File destFile) throws IOException { if (!destFile.exists()) { destFile.createNewFile(); } FileChannel source = null; FileChannel destination = null; try { source = new FileInputStream(sourceFile).getChannel(); destination = new FileOutputStream(destFile).getChannel(); destination.transferFrom(source, 0, source.size()); } finally { if (source != null) { source.close(); } if (destination != null) { destination.close(); } } } Code Sample 2: public static File getClassLoaderFile(String filename) throws IOException { Resource resource = new ClassPathResource(filename); try { return resource.getFile(); } catch (IOException e) { } InputStream is = null; FileOutputStream os = null; try { String tempFilename = RandomStringUtils.randomAlphanumeric(20); File file = File.createTempFile(tempFilename, null); is = resource.getInputStream(); os = new FileOutputStream(file); IOUtils.copy(is, os); return file; } finally { IOUtils.closeQuietly(is); IOUtils.closeQuietly(os); } }
00
Code Sample 1: private IMolecule readMolecule() throws Exception { String xpath = ""; if (index.equals("ichi")) { xpath = URLEncoder.encode("//molecule[./identifier/basic='" + query + "']", UTF8); } else if (index.equals("kegg")) { xpath = URLEncoder.encode("//molecule[./@name='" + query + "' and ./@dictRef='KEGG']", UTF8); } else if (index.equals("nist")) { xpath = URLEncoder.encode("//molecule[../@id='" + query + "']", UTF8); } else { logger.error("Did not recognize index type: " + index); return null; } String colname = URLEncoder.encode("/" + this.collection, UTF8); logger.info("Doing query: " + xpath + " in collection " + colname); URL url = new URL("http://" + server + "/Bob/QueryXindice"); logger.info("Connection to server: " + url.toString()); URLConnection connection = url.openConnection(); connection.setDoOutput(true); PrintWriter out = new PrintWriter(connection.getOutputStream()); out.print("detailed=on"); out.print("&"); out.print("xmlOnly=on"); out.print("&"); out.print("colName=" + colname); out.print("&"); out.print("xpathString=" + xpath); out.print("&"); out.println("query=Query"); out.close(); InputStream stream = connection.getInputStream(); BufferedReader in = new BufferedReader(new InputStreamReader(stream)); in.mark(1000000); in.readLine(); String comment = in.readLine(); logger.debug("The comment is: " + comment); Pattern p = Pattern.compile("<!-- There are (\\d{1,6}) results! -->"); Matcher match = p.matcher(comment); if (match.find()) { resultNum = match.group(1); } else { resultNum = "0"; } logger.debug("The number of result is " + resultNum); in.reset(); CMLReader reader = new CMLReader(stream); ChemFile cf = (ChemFile) reader.read((ChemObject) new ChemFile()); logger.debug("#sequences: " + cf.getChemSequenceCount()); IMolecule m = null; if (cf.getChemSequenceCount() > 0) { org.openscience.cdk.interfaces.IChemSequence chemSequence = cf.getChemSequence(0); logger.debug("#models in sequence: " + chemSequence.getChemModelCount()); if (chemSequence.getChemModelCount() > 0) { org.openscience.cdk.interfaces.IChemModel chemModel = chemSequence.getChemModel(0); org.openscience.cdk.interfaces.IMoleculeSet setOfMolecules = chemModel.getMoleculeSet(); logger.debug("#mols in model: " + setOfMolecules.getMoleculeCount()); if (setOfMolecules.getMoleculeCount() > 0) { m = setOfMolecules.getMolecule(0); } else { logger.warn("No molecules in the model"); } } else { logger.warn("No models in the sequence"); } } else { logger.warn("No sequences in the file"); } in.close(); return m; } Code Sample 2: public String postData(String url, List<NameValuePair> nameValuePairs) { HttpClient httpclient = new DefaultHttpClient(); HttpPost httppost = new HttpPost(url); StringBuilder sb = new StringBuilder(); try { httppost.setEntity(new UrlEncodedFormEntity(nameValuePairs)); HttpResponse response = httpclient.execute(httppost); Header[] headers = response.getAllHeaders(); for (int i = 0; i < headers.length; i++) { Log.i(TAG, "HEADER: " + headers[i].getName() + " - " + headers[i].getValue()); } InputStream is = response.getEntity().getContent(); BufferedReader reader = new BufferedReader(new InputStreamReader(is)); String line = ""; while ((line = reader.readLine()) != null) { System.out.println("Parsing line... " + line); sb.append(line); if (line.contains("<html xmlns:fn")) { String gtinCode = line.substring(line.indexOf("GLN:") + 165, line.indexOf("GLN:") + 176); Log.i(TAG, "OUT: " + gtinCode); break; } } Log.i(TAG, "Post Communication OK"); } catch (ClientProtocolException e) { Log.e(TAG, "ClientProtocolException ", e); } catch (IOException e) { Log.e(TAG, "HTTP Not Available", e); } return sb.toString(); }
11
Code Sample 1: public static void copy(String sourceName, String destName, StatusWindow status) throws IOException { File src = new File(sourceName); File dest = new File(destName); BufferedInputStream source = null; BufferedOutputStream destination = null; byte[] buffer; int bytes_read; long byteCount = 0; if (!src.exists()) throw new IOException("Source not found: " + src); if (!src.canRead()) throw new IOException("Source is unreadable: " + src); if (src.isFile()) { if (!dest.exists()) { File parentdir = Utils.parent(dest); if (!parentdir.exists()) parentdir.mkdir(); } else if (dest.isDirectory()) { if (src.isDirectory()) dest = new File(dest + File.separator + src); else dest = new File(dest + File.separator + src.getName()); } } else if (src.isDirectory()) { if (dest.isFile()) throw new IOException("Cannot copy directory " + src + " to file " + dest); if (!dest.exists()) dest.mkdir(); } if ((!dest.canWrite()) && (dest.exists())) throw new IOException("Destination is unwriteable: " + dest); if (src.isFile()) { try { if (status != null) { status.setMaximum(100); status.setMessage(Utils.trimFileName(src.toString(), 40), 50); } source = new BufferedInputStream(new FileInputStream(src)); destination = new BufferedOutputStream(new FileOutputStream(dest)); buffer = new byte[4096]; byteCount = 0; while (true) { bytes_read = source.read(buffer); if (bytes_read == -1) break; destination.write(buffer, 0, bytes_read); byteCount = byteCount + bytes_read; } } finally { if (status != null) { status.setMessage(Utils.trimFileName(src.toString(), 40), 100); } if (source != null) source.close(); if (destination != null) destination.close(); } } else if (src.isDirectory()) { String targetfile, target, targetdest; String[] files = src.list(); if (status != null) { status.setMaximum(files.length); } for (int i = 0; i < files.length; i++) { if (status != null) { status.setMessage(Utils.trimFileName(src.toString(), 40), i); } targetfile = files[i]; target = src + File.separator + targetfile; targetdest = dest + File.separator + targetfile; if ((new File(target)).isDirectory()) { copy(new File(target).getCanonicalPath(), new File(targetdest).getCanonicalPath(), status); } else { try { byteCount = 0; source = new BufferedInputStream(new FileInputStream(target)); destination = new BufferedOutputStream(new FileOutputStream(targetdest)); buffer = new byte[4096]; while (true) { bytes_read = source.read(buffer); if (bytes_read == -1) break; destination.write(buffer, 0, bytes_read); byteCount = byteCount + bytes_read; } } finally { if (source != null) source.close(); if (destination != null) destination.close(); } } } } } Code Sample 2: private static void zip(ZipArchiveOutputStream zos, File efile, String base) throws IOException { if (efile.isDirectory()) { File[] lf = efile.listFiles(); base = base + File.separator + efile.getName(); for (File file : lf) { zip(zos, file, base); } } else { ZipArchiveEntry entry = new ZipArchiveEntry(efile, base + File.separator + efile.getName()); zos.setEncoding("utf-8"); zos.putArchiveEntry(entry); InputStream is = new FileInputStream(efile); IOUtils.copy(is, zos); is.close(); zos.closeArchiveEntry(); } }
11
Code Sample 1: @Test public void testCopy_readerToOutputStream_Encoding_nullEncoding() throws Exception { InputStream in = new ByteArrayInputStream(inData); in = new YellOnCloseInputStreamTest(in); Reader reader = new InputStreamReader(in, "US-ASCII"); ByteArrayOutputStream baout = new ByteArrayOutputStream(); OutputStream out = new YellOnFlushAndCloseOutputStreamTest(baout, false, true); IOUtils.copy(reader, out, null); assertEquals("Sizes differ", inData.length, baout.size()); assertTrue("Content differs", Arrays.equals(inData, baout.toByteArray())); } Code Sample 2: public static boolean encodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.ENCODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; }
11
Code Sample 1: public User createUser(Map userData) throws HamboFatalException { DBConnection con = null; try { con = DBServiceManager.allocateConnection(); con.setAutoCommit(false); String userId = (String) userData.get(HamboUser.USER_ID); String sql = "insert into user_UserAccount " + "(userid,firstname,lastname,street,zipcode,city," + "province,country,email,cellph,gender,password," + "language,timezn,birthday,datecreated,lastlogin," + "disabled,wapsigned,ldapInSync,offerings,firstcb) " + "values (?,?,?,?,?,?,?,?,?,?,?,?,?,?,?,?,?,?,?,?,?,?)"; PreparedStatement ps = con.prepareStatement(sql); ps.setString(1, userId); ps.setString(2, (String) userData.get(HamboUser.FIRST_NAME)); ps.setString(3, (String) userData.get(HamboUser.LAST_NAME)); ps.setString(4, (String) userData.get(HamboUser.STREET_ADDRESS)); ps.setString(5, (String) userData.get(HamboUser.ZIP_CODE)); ps.setString(6, (String) userData.get(HamboUser.CITY)); ps.setString(7, (String) userData.get(HamboUser.STATE)); ps.setString(8, (String) userData.get(HamboUser.COUNTRY)); ps.setString(9, (String) userData.get(HamboUser.EXTERNAL_EMAIL_ADDRESS)); ps.setString(10, (String) userData.get(HamboUser.MOBILE_NUMBER)); ps.setString(11, (String) userData.get(HamboUser.GENDER)); ps.setString(12, (String) userData.get(HamboUser.PASSWORD)); ps.setString(13, (String) userData.get(HamboUser.LANGUAGE)); ps.setString(14, (String) userData.get(HamboUser.TIME_ZONE)); java.sql.Date date = (java.sql.Date) userData.get(HamboUser.BIRTHDAY); if (date != null) ps.setDate(15, date); else ps.setNull(15, Types.DATE); date = (java.sql.Date) userData.get(HamboUser.CREATED); if (date != null) ps.setDate(16, date); else ps.setNull(16, Types.DATE); date = (java.sql.Date) userData.get(HamboUser.LAST_LOGIN); if (date != null) ps.setDate(17, date); else ps.setNull(17, Types.DATE); Boolean bool = (Boolean) userData.get(HamboUser.DISABLED); if (bool != null) ps.setBoolean(18, bool.booleanValue()); else ps.setBoolean(18, UserAccountInfo.DEFAULT_DISABLED); bool = (Boolean) userData.get(HamboUser.WAP_ACCOUNT); if (bool != null) ps.setBoolean(19, bool.booleanValue()); else ps.setBoolean(19, UserAccountInfo.DEFAULT_WAP_ACCOUNT); bool = (Boolean) userData.get(HamboUser.LDAP_IN_SYNC); if (bool != null) ps.setBoolean(20, bool.booleanValue()); else ps.setBoolean(20, UserAccountInfo.DEFAULT_LDAP_IN_SYNC); bool = (Boolean) userData.get(HamboUser.OFFERINGS); if (bool != null) ps.setBoolean(21, bool.booleanValue()); else ps.setBoolean(21, UserAccountInfo.DEFAULT_OFFERINGS); ps.setString(22, (String) userData.get(HamboUser.COBRANDING_ID)); con.executeUpdate(ps, null); ps = con.prepareStatement(DBUtil.getQueryCurrentOID(con, "user_UserAccount", "newoid")); ResultSet rs = con.executeQuery(ps, null); if (rs.next()) { OID newOID = new OID(rs.getBigDecimal("newoid").doubleValue()); userData.put(HamboUser.OID, newOID); } con.commit(); } catch (Exception ex) { if (con != null) try { con.rollback(); } catch (SQLException sqlex) { } throw new HamboFatalException(MSG_INSERT_FAILED, ex); } finally { if (con != null) try { con.reset(); } catch (SQLException ex) { } if (con != null) con.release(); } return buildUser(userData); } Code Sample 2: public synchronized void insertMessage(FrostUnsentMessageObject mo) throws SQLException { AttachmentList files = mo.getAttachmentsOfType(Attachment.FILE); AttachmentList boards = mo.getAttachmentsOfType(Attachment.BOARD); Connection conn = AppLayerDatabase.getInstance().getPooledConnection(); try { conn.setAutoCommit(false); PreparedStatement ps = conn.prepareStatement("INSERT INTO UNSENDMESSAGES (" + "primkey,messageid,inreplyto,board,sendafter,idlinepos,idlinelen,fromname,subject,recipient,msgcontent," + "hasfileattachment,hasboardattachment,timeAdded" + ") VALUES (?,?,?,?,?,?,?,?,?,?,?,?,?,?)"); Long identity = null; Statement stmt = AppLayerDatabase.getInstance().createStatement(); ResultSet rs = stmt.executeQuery("select UNIQUEKEY('UNSENDMESSAGES')"); if (rs.next()) { identity = new Long(rs.getLong(1)); } else { logger.log(Level.SEVERE, "Could not retrieve a new unique key!"); } rs.close(); stmt.close(); mo.setMsgIdentity(identity.longValue()); int i = 1; ps.setLong(i++, mo.getMsgIdentity()); ps.setString(i++, mo.getMessageId()); ps.setString(i++, mo.getInReplyTo()); ps.setInt(i++, mo.getBoard().getPrimaryKey().intValue()); ps.setLong(i++, 0); ps.setInt(i++, mo.getIdLinePos()); ps.setInt(i++, mo.getIdLineLen()); ps.setString(i++, mo.getFromName()); ps.setString(i++, mo.getSubject()); ps.setString(i++, mo.getRecipientName()); ps.setString(i++, mo.getContent()); ps.setBoolean(i++, (files.size() > 0)); ps.setBoolean(i++, (boards.size() > 0)); ps.setLong(i++, mo.getTimeAdded()); int inserted = 0; try { inserted = ps.executeUpdate(); } finally { ps.close(); } if (inserted == 0) { logger.log(Level.SEVERE, "message insert returned 0 !!!"); return; } mo.setMsgIdentity(identity.longValue()); if (files.size() > 0) { PreparedStatement p = conn.prepareStatement("INSERT INTO UNSENDFILEATTACHMENTS" + " (msgref,filename,filesize,filekey)" + " VALUES (?,?,?,?)"); for (Iterator it = files.iterator(); it.hasNext(); ) { FileAttachment fa = (FileAttachment) it.next(); int ix = 1; p.setLong(ix++, mo.getMsgIdentity()); p.setString(ix++, fa.getInternalFile().getPath()); p.setLong(ix++, fa.getFileSize()); p.setString(ix++, fa.getKey()); int ins = p.executeUpdate(); if (ins == 0) { logger.log(Level.SEVERE, "fileattachment insert returned 0 !!!"); } } p.close(); } if (boards.size() > 0) { PreparedStatement p = conn.prepareStatement("INSERT INTO UNSENDBOARDATTACHMENTS" + " (msgref,boardname,boardpublickey,boardprivatekey,boarddescription)" + " VALUES (?,?,?,?,?)"); for (Iterator it = boards.iterator(); it.hasNext(); ) { BoardAttachment ba = (BoardAttachment) it.next(); Board b = ba.getBoardObj(); int ix = 1; p.setLong(ix++, mo.getMsgIdentity()); p.setString(ix++, b.getNameLowerCase()); p.setString(ix++, b.getPublicKey()); p.setString(ix++, b.getPrivateKey()); p.setString(ix++, b.getDescription()); int ins = p.executeUpdate(); if (ins == 0) { logger.log(Level.SEVERE, "boardattachment insert returned 0 !!!"); } } p.close(); } conn.commit(); conn.setAutoCommit(true); } catch (Throwable t) { logger.log(Level.SEVERE, "Exception during insert of unsent message", t); try { conn.rollback(); } catch (Throwable t1) { logger.log(Level.SEVERE, "Exception during rollback", t1); } try { conn.setAutoCommit(true); } catch (Throwable t1) { } } finally { AppLayerDatabase.getInstance().givePooledConnection(conn); } }
11
Code Sample 1: public static void copyAFile(final String entree, final String sortie) { FileChannel in = null; FileChannel out = null; try { in = new FileInputStream(entree).getChannel(); out = new FileOutputStream(sortie).getChannel(); in.transferTo(0, in.size(), out); } catch (Exception e) { e.printStackTrace(); } finally { if (in != null) { try { in.close(); } catch (IOException e) { e.printStackTrace(); } } if (out != null) { try { out.close(); } catch (IOException e) { e.printStackTrace(); } } } } Code Sample 2: public static File insertFileInto(File zipFile, File toInsert, String targetPath) { Zip64File zip64File = null; try { boolean compress = false; zip64File = new Zip64File(zipFile); FileEntry testEntry = getFileEntry(zip64File, targetPath); if (testEntry != null && testEntry.getMethod() == FileEntry.iMETHOD_DEFLATED) { compress = true; } processAndCreateFolderEntries(zip64File, parseTargetPath(targetPath, toInsert), compress); if (testEntry != null) { log.info("[insertFileInto] Entry exists: " + testEntry.getName()); log.info("[insertFileInto] Will delete this entry before inserting: " + toInsert.getName()); if (!testEntry.isDirectory()) { zip64File.delete(testEntry.getName()); } else { log.info("[insertFileInto] Entry is a directory. " + "Will delete all files contained in this entry and insert " + toInsert.getName() + "and all nested files."); if (!targetPath.contains("/")) { targetPath = targetPath + "/"; } deleteFileEntry(zip64File, testEntry); log.info("[insertFileInto] Entry successfully deleted."); } log.info("[insertFileInto] Writing new Entry: " + targetPath); EntryOutputStream out = null; if (!compress) { out = zip64File.openEntryOutputStream(targetPath, FileEntry.iMETHOD_STORED, new Date(toInsert.lastModified())); } else { out = zip64File.openEntryOutputStream(targetPath, FileEntry.iMETHOD_DEFLATED, new Date(toInsert.lastModified())); } if (toInsert.isDirectory()) { out.flush(); out.close(); log.info("[insertFileInto] Finished writing entry: " + targetPath); List<String> containedPaths = normalizePaths(toInsert); List<File> containedFiles = listAllFilesAndFolders(toInsert, new ArrayList<File>()); log.info("[insertFileInto] Added entry is a folder."); log.info("[insertFileInto] Adding all nested files: "); for (int i = 0; i < containedPaths.size(); i++) { File currentFile = containedFiles.get(i); String currentPath = targetPath.replace("/", "") + File.separator + containedPaths.get(i); EntryOutputStream loop_out = null; if (!compress) { loop_out = zip64File.openEntryOutputStream(currentPath, FileEntry.iMETHOD_STORED, new Date(currentFile.lastModified())); } else { loop_out = zip64File.openEntryOutputStream(currentPath, FileEntry.iMETHOD_DEFLATED, new Date(currentFile.lastModified())); } if (currentFile.isFile()) { InputStream loop_in = new FileInputStream(currentFile); IOUtils.copyLarge(loop_in, loop_out); loop_in.close(); } log.info("[insertFileInto] Added: " + currentPath); loop_out.flush(); loop_out.close(); } } else { InputStream in = new FileInputStream(toInsert); IOUtils.copyLarge(in, out); in.close(); out.flush(); out.close(); } } else { EntryOutputStream out = null; if (!compress) { out = zip64File.openEntryOutputStream(targetPath, FileEntry.iMETHOD_STORED, new Date(toInsert.lastModified())); } else { out = zip64File.openEntryOutputStream(targetPath, FileEntry.iMETHOD_DEFLATED, new Date(toInsert.lastModified())); } if (toInsert.isDirectory()) { out.flush(); out.close(); log.info("[insertFileInto] Finished writing entry: " + targetPath); List<String> containedPaths = normalizePaths(toInsert); List<File> containedFiles = listAllFilesAndFolders(toInsert, new ArrayList<File>()); log.info("[insertFileInto] Added entry is a folder."); log.info("[insertFileInto] Adding all nested files: "); for (int i = 0; i < containedPaths.size(); i++) { File currentFile = containedFiles.get(i); String currentPath = targetPath.replace("/", "") + File.separator + containedPaths.get(i); EntryOutputStream loop_out = null; if (!compress) { loop_out = zip64File.openEntryOutputStream(currentPath, FileEntry.iMETHOD_STORED, new Date(currentFile.lastModified())); } else { loop_out = zip64File.openEntryOutputStream(currentPath, FileEntry.iMETHOD_DEFLATED, new Date(currentFile.lastModified())); } if (currentFile.isFile()) { InputStream loop_in = new FileInputStream(currentFile); IOUtils.copyLarge(loop_in, loop_out); loop_in.close(); } log.info("[insertFileInto] Added: " + currentPath); loop_out.flush(); loop_out.close(); } } else { InputStream in = new FileInputStream(toInsert); IOUtils.copyLarge(in, out); in.close(); out.flush(); out.close(); } } log.info("[insertFileInto] Done! Added " + toInsert.getName() + " to zip."); zip64File.close(); } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } return new File(zip64File.getDiskFile().getFileName()); }
11
Code Sample 1: public static void copyFile1(File srcFile, File destFile) throws IOException { if(!destFile.exists()) { destFile.createNewFile(); } FileInputStream fis = new FileInputStream(srcFile); FileOutputStream fos = new FileOutputStream(destFile); FileChannel source = fis.getChannel(); FileChannel destination = fos.getChannel(); destination.transferFrom(source, 0, source.size()); source.close(); destination.close(); fis.close(); fos.close(); } Code Sample 2: private void compress(File target, Set<File> files) throws CacheOperationException, ConfigurationException { ZipOutputStream zipOutput = null; try { zipOutput = new ZipOutputStream(new BufferedOutputStream(new FileOutputStream(target))); for (File file : files) { BufferedInputStream fileInput = null; File cachePathName = new File(cacheFolder, file.getPath()); try { if (!cachePathName.exists()) { throw new CacheOperationException("Expected to add file ''{0}'' to export archive ''{1}'' (Account : {2}) but it " + "has gone missing (cause unknown). This can indicate implementation or deployment " + "error. Aborting export operation as a safety precaution.", cachePathName.getPath(), target.getAbsolutePath(), account.getOid()); } fileInput = new BufferedInputStream(new FileInputStream(cachePathName)); ZipEntry entry = new ZipEntry(file.getPath()); entry.setSize(cachePathName.length()); entry.setTime(cachePathName.lastModified()); zipOutput.putNextEntry(entry); cacheLog.debug("Added new export zip entry ''{0}''.", file.getPath()); int count, total = 0; int buffer = 2048; byte[] data = new byte[buffer]; while ((count = fileInput.read(data, 0, buffer)) != -1) { zipOutput.write(data, 0, count); total += count; } zipOutput.flush(); if (total != cachePathName.length()) { throw new CacheOperationException("Only wrote {0} out of {1} bytes when archiving file ''{2}'' (Account : {3}). " + "This could have occured either due implementation error or file I/O error. " + "Aborting archive operation to prevent a potentially corrupt export archive to " + "be created.", total, cachePathName.length(), cachePathName.getPath(), account.getOid()); } else { cacheLog.debug("Wrote {0} out of {1} bytes to zip entry ''{2}''", total, cachePathName.length(), file.getPath()); } } catch (SecurityException e) { throw new ConfigurationException("Security manager has denied r/w access when attempting to read file ''{0}'' and " + "write it to archive ''{1}'' (Account : {2}) : {3}", e, cachePathName.getPath(), target, account.getOid(), e.getMessage()); } catch (IllegalArgumentException e) { throw new CacheOperationException("Error creating ZIP archive for account ID = {0} : {1}", e, account.getOid(), e.getMessage()); } catch (FileNotFoundException e) { throw new CacheOperationException("Attempted to include file ''{0}'' in export archive but it has gone missing " + "(Account : {1}). Possible implementation error in local file cache. Aborting " + "export operation as a precaution ({2})", e, cachePathName.getPath(), account.getOid(), e.getMessage()); } catch (ZipException e) { throw new CacheOperationException("Error writing export archive for account ID = {0} : {1}", e, account.getOid(), e.getMessage()); } catch (IOException e) { throw new CacheOperationException("I/O error while creating export archive for account ID = {0}. " + "Operation aborted ({1})", e, account.getOid(), e.getMessage()); } finally { if (zipOutput != null) { try { zipOutput.closeEntry(); } catch (Throwable t) { cacheLog.warn("Unable to close zip entry for file ''{0}'' in export archive ''{1}'' " + "(Account : {2}) : {3}.", t, file.getPath(), target.getAbsolutePath(), account.getOid(), t.getMessage()); } } if (fileInput != null) { try { fileInput.close(); } catch (Throwable t) { cacheLog.warn("Failed to close input stream from file ''{0}'' being added " + "to export archive (Account : {1}) : {2}", t, cachePathName.getPath(), account.getOid(), t.getMessage()); } } } } } catch (FileNotFoundException e) { throw new CacheOperationException("Unable to create target export archive ''{0}'' for account {1) : {2}", e, target, account.getOid(), e.getMessage()); } finally { try { if (zipOutput != null) { zipOutput.close(); } } catch (Throwable t) { cacheLog.warn("Failed to close the stream to export archive ''{0}'' : {1}.", t, target, t.getMessage()); } } }
11
Code Sample 1: private boolean copyFile(File inFile, File outFile) { BufferedReader reader = null; BufferedWriter writer = null; try { reader = new BufferedReader(new FileReader(inFile)); writer = new BufferedWriter(new FileWriter(outFile)); while (reader.ready()) { writer.write(reader.read()); } writer.flush(); } catch (IOException ex) { ex.printStackTrace(); } finally { if (reader != null) { try { reader.close(); } catch (IOException ex) { ex.printStackTrace(); return false; } } if (writer != null) { try { writer.close(); } catch (IOException ex) { return false; } } } return true; } Code Sample 2: @NotNull private Properties loadProperties() { File file = new File(homeLocator.getHomeDir(), configFilename); if (!file.exists()) { try { file.createNewFile(); } catch (IOException e) { throw new RuntimeException("IOException while creating \"" + file.getAbsolutePath() + "\".", e); } } if (!file.canRead() || !file.canWrite()) { throw new RuntimeException("Cannot read and write from file: " + file.getAbsolutePath()); } if (lastModifiedByUs < file.lastModified()) { if (logger.isLoggable(Level.FINE)) { logger.fine("File \"" + file + "\" is newer on disk. Read it ..."); } Properties properties = new Properties(); try { FileInputStream in = new FileInputStream(file); try { properties.loadFromXML(in); } catch (InvalidPropertiesFormatException e) { FileOutputStream out = new FileOutputStream(file); try { properties.storeToXML(out, comment); } finally { out.close(); } } finally { in.close(); } } catch (IOException e) { throw new RuntimeException("IOException while reading from \"" + file.getAbsolutePath() + "\".", e); } this.lastModifiedByUs = file.lastModified(); this.properties = properties; if (logger.isLoggable(Level.FINE)) { logger.fine("... read done."); } } assert this.properties != null; return this.properties; }
11
Code Sample 1: public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFormat.ACRNEMA_STREAM) { System.out.println("\n" + src + ": not an ACRNEMA stream!"); return; } p.parseDcmFile(format, Tags.PixelData); if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) { System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert"); return; } boolean hasPixelData = p.getReadTag() == Tags.PixelData; boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12; int pxlen = p.getReadLength(); if (hasPixelData) { if (inflate) { ds.putUS(Tags.BitsAllocated, 16); pxlen = pxlen * 4 / 3; } if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) { System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert"); return; } } ds.putUI(Tags.StudyInstanceUID, uid(studyUID)); ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID)); ds.putUI(Tags.SOPInstanceUID, uid(instUID)); ds.putUI(Tags.SOPClassUID, classUID); if (!ds.contains(Tags.NumberOfSamples)) { ds.putUS(Tags.NumberOfSamples, 1); } if (!ds.contains(Tags.PhotometricInterpretation)) { ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2"); } if (fmi) { ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian)); } OutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); try { } finally { ds.writeFile(out, encodeParam()); if (hasPixelData) { if (!skipGroupLen) { out.write(PXDATA_GROUPLEN); int grlen = pxlen + 8; out.write((byte) grlen); out.write((byte) (grlen >> 8)); out.write((byte) (grlen >> 16)); out.write((byte) (grlen >> 24)); } out.write(PXDATA_TAG); out.write((byte) pxlen); out.write((byte) (pxlen >> 8)); out.write((byte) (pxlen >> 16)); out.write((byte) (pxlen >> 24)); } if (inflate) { int b2, b3; for (; pxlen > 0; pxlen -= 3) { out.write(in.read()); b2 = in.read(); b3 = in.read(); out.write(b2 & 0x0f); out.write(b2 >> 4 | ((b3 & 0x0f) << 4)); out.write(b3 >> 4); } } else { for (; pxlen > 0; --pxlen) { out.write(in.read()); } } out.close(); } System.out.print('.'); } finally { in.close(); } } Code Sample 2: private void update() throws IOException { FileOutputStream out = new FileOutputStream(combined); try { File[] _files = listJavascript(); List<File> files = new ArrayList<File>(Arrays.asList(_files)); files.add(0, new File(jsdir.getAbsolutePath() + "/leemba.js")); files.add(0, new File(jsdir.getAbsolutePath() + "/jquery.min.js")); for (File js : files) { FileInputStream fin = null; try { int count = 0; byte buf[] = new byte[16384]; fin = new FileInputStream(js); while ((count = fin.read(buf)) > 0) out.write(buf, 0, count); } catch (Throwable t) { log.error("Failed to read file: " + js.getAbsolutePath(), t); } finally { if (fin != null) fin.close(); } } } finally { out.close(); } }
00
Code Sample 1: protected String loadPage(String url_string) { try { URL url = new URL(url_string); HttpURLConnection connection = null; InputStream is = null; try { connection = (HttpURLConnection) url.openConnection(); int response = connection.getResponseCode(); if (response == HttpURLConnection.HTTP_ACCEPTED || response == HttpURLConnection.HTTP_OK) { is = connection.getInputStream(); String page = ""; while (page.length() < MAX_PAGE_SIZE) { byte[] buffer = new byte[2048]; int len = is.read(buffer); if (len < 0) { break; } page += new String(buffer, 0, len); } return (page); } else { informFailure("httpinvalidresponse", "" + response); return (null); } } finally { try { if (is != null) { is.close(); } if (connection != null) { connection.disconnect(); } } catch (Throwable e) { Debug.printStackTrace(e); } } } catch (Throwable e) { informFailure("httploadfail", e.toString()); return (null); } } Code Sample 2: public static String post(String actionUrl, Map<String, String> params) { HttpPost httpPost = new HttpPost(actionUrl); List<NameValuePair> list = new ArrayList<NameValuePair>(); for (Map.Entry<String, String> entry : params.entrySet()) { list.add(new BasicNameValuePair(entry.getKey(), entry.getValue())); } try { httpPost.setEntity(new UrlEncodedFormEntity(list, HTTP.UTF_8)); HttpResponse httpResponse = new DefaultHttpClient().execute(httpPost); if (httpResponse.getStatusLine().getStatusCode() == 200) { return EntityUtils.toString(httpResponse.getEntity()); } } catch (Exception e) { throw new RuntimeException(e); } return null; }
00
Code Sample 1: public static void main(String[] argz) { int X, Y, Z; X = 256; Y = 256; Z = 256; try { String work_folder = "C:\\Documents and Settings\\Entheogen\\My Documents\\school\\jung\\vol_data\\CT_HEAD3"; FileOutputStream out_stream = new FileOutputStream(new File(work_folder + "\\converted.dat")); FileChannel out = out_stream.getChannel(); String f_name = "head256.raw"; File file = new File(work_folder + "\\" + f_name); FileChannel in = new FileInputStream(file).getChannel(); ByteBuffer buffa = BufferUtil.newByteBuffer((int) file.length()); in.read(buffa); in.close(); int N = 256; FloatBuffer output_data = BufferUtil.newFloatBuffer(N * N * N); float min = Float.MAX_VALUE; for (int i = 0, j = 0; i < buffa.capacity(); i++, j++) { byte c = buffa.get(i); min = Math.min(min, (float) (c)); output_data.put((float) (c)); } for (int i = 0; i < Y - X; ++i) { for (int j = 0; j < Y; ++j) { for (int k = 0; k < Z; ++k) { output_data.put(min); } } } output_data.rewind(); System.out.println("size of output_data = " + Integer.toString(output_data.capacity())); out.write(BufferUtil.copyFloatBufferAsByteBuffer(output_data)); ByteBuffer buffa2 = BufferUtil.newByteBuffer(2); buffa2.put((byte) '.'); out.close(); } catch (Exception exc) { exc.printStackTrace(); } } Code Sample 2: public static boolean reportException(Throwable ex, HashMap<String, String> suppl) { if (Activator.getDefault().getPreferenceStore().getBoolean(PreferenceConstants.P_CRASH_REPORTING)) { logger.debug("Report exception to devs..."); String data = "reportType=exception&" + "message=" + ex.getMessage(); data += "&build=" + Platform.getBundle("de.uni_mannheim.swt.codeconjurer").getHeaders().get("Bundle-Version"); int ln = 0; for (StackTraceElement el : ex.getStackTrace()) { data += "&st_line_" + ++ln + "=" + el.getClassName() + "#" + el.getMethodName() + "<" + el.getLineNumber() + ">"; } data += "&lines=" + ln; data += "&Suppl-Description=" + ex.toString(); data += "&Suppl-Server=" + Activator.getDefault().getPreferenceStore().getString(PreferenceConstants.P_SERVER); data += "&Suppl-User=" + Activator.getDefault().getPreferenceStore().getString(PreferenceConstants.P_USERNAME); if (suppl != null) { for (String key : suppl.keySet()) { data += "&Suppl-" + key + "=" + suppl.get(key); } } try { URL url = new URL("http://www.merobase.com:7777/org.code_conjurer.udc/CrashReport"); URLConnection conn = url.openConnection(); conn.setDoOutput(true); OutputStreamWriter writer = new OutputStreamWriter(conn.getOutputStream()); writer.write(data); writer.flush(); StringBuffer answer = new StringBuffer(); BufferedReader reader = new BufferedReader(new InputStreamReader(conn.getInputStream())); String line; while ((line = reader.readLine()) != null) { answer.append(line + "\r\n"); } writer.close(); reader.close(); logger.debug(answer.toString()); } catch (Exception e) { logger.debug("Could not report exception"); return false; } return true; } else { logger.debug("Reporting not wished!"); return false; } }
11
Code Sample 1: public static void copyFile(File src, File dst) throws ResourceNotFoundException, ParseErrorException, Exception { if (src.getAbsolutePath().endsWith(".vm")) { copyVMFile(src, dst.getAbsolutePath().substring(0, dst.getAbsolutePath().lastIndexOf(".vm"))); } else { FileInputStream fIn; FileOutputStream fOut; FileChannel fIChan, fOChan; long fSize; MappedByteBuffer mBuf; fIn = new FileInputStream(src); fOut = new FileOutputStream(dst); fIChan = fIn.getChannel(); fOChan = fOut.getChannel(); fSize = fIChan.size(); mBuf = fIChan.map(FileChannel.MapMode.READ_ONLY, 0, fSize); fOChan.write(mBuf); fIChan.close(); fIn.close(); fOChan.close(); fOut.close(); } } Code Sample 2: public static boolean decodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.DECODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; }
00
Code Sample 1: private String readJsonString() { StringBuilder builder = new StringBuilder(); HttpClient client = new DefaultHttpClient(); HttpGet httpGet = new HttpGet(SERVER_URL); try { HttpResponse response = client.execute(httpGet); StatusLine statusLine = response.getStatusLine(); int statusCode = statusLine.getStatusCode(); if (statusCode == 200) { HttpEntity entity = response.getEntity(); InputStream content = entity.getContent(); BufferedReader reader = new BufferedReader(new InputStreamReader(content)); String line; while ((line = reader.readLine()) != null) { builder.append(line); } } else { Log.e(TAG, "Failed to download file"); } } catch (ClientProtocolException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } return builder.toString(); } Code Sample 2: public void run() { saveWLHome(); for (final TabControl control : tabControls) { control.performOk(WLPropertyPage.this.getProject(), WLPropertyPage.this); } if (isEnabledJCLCopy()) { final File url = new File(WLPropertyPage.this.domainDirectory.getText()); File lib = new File(url, "lib"); File log4jLibrary = new File(lib, "log4j-1.2.13.jar"); if (!log4jLibrary.exists()) { InputStream srcFile = null; FileOutputStream fos = null; try { srcFile = toInputStream(new Path("jcl/log4j-1.2.13.jar")); fos = new FileOutputStream(log4jLibrary); IOUtils.copy(srcFile, fos); srcFile.close(); fos.flush(); fos.close(); srcFile = toInputStream(new Path("/jcl/commons-logging-1.0.4.jar")); File jcl = new File(lib, "commons-logging-1.0.4.jar"); fos = new FileOutputStream(jcl); IOUtils.copy(srcFile, fos); } catch (IOException e) { Logger.log(Logger.ERROR, "Could not copy JCL jars file to Bea WL", e); } finally { try { if (srcFile != null) { srcFile.close(); srcFile = null; } if (fos != null) { fos.flush(); fos.close(); fos = null; } } catch (IOException e) { } } } } if (isEnabledJSTLCopy()) { File url = new File(WLPropertyPage.this.domainDirectory.getText()); File lib = new File(url, "lib"); File jstlLibrary = new File(lib, "jstl.jar"); if (!jstlLibrary.exists()) { InputStream srcFile = null; FileOutputStream fos = null; try { srcFile = toInputStream(new Path("jstl/jstl.jar")); fos = new FileOutputStream(jstlLibrary); IOUtils.copy(srcFile, fos); } catch (IOException e) { Logger.log(Logger.ERROR, "Could not copy the JSTL 1.1 jar file to Bea WL", e); } finally { try { if (srcFile != null) { srcFile.close(); srcFile = null; } if (fos != null) { fos.flush(); fos.close(); fos = null; } } catch (final IOException e) { Logger.getLog().debug("I/O exception closing resources", e); } } } } }
11
Code Sample 1: protected void setupService(MessageContext msgContext) throws Exception { String realpath = msgContext.getStrProp(Constants.MC_REALPATH); String extension = (String) getOption(OPTION_JWS_FILE_EXTENSION); if (extension == null) extension = DEFAULT_JWS_FILE_EXTENSION; if ((realpath != null) && (realpath.endsWith(extension))) { String jwsFile = realpath; String rel = msgContext.getStrProp(Constants.MC_RELATIVE_PATH); File f2 = new File(jwsFile); if (!f2.exists()) { throw new FileNotFoundException(rel); } if (rel.charAt(0) == '/') { rel = rel.substring(1); } int lastSlash = rel.lastIndexOf('/'); String dir = null; if (lastSlash > 0) { dir = rel.substring(0, lastSlash); } String file = rel.substring(lastSlash + 1); String outdir = msgContext.getStrProp(Constants.MC_JWS_CLASSDIR); if (outdir == null) outdir = "."; if (dir != null) { outdir = outdir + File.separator + dir; } File outDirectory = new File(outdir); if (!outDirectory.exists()) { outDirectory.mkdirs(); } if (log.isDebugEnabled()) log.debug("jwsFile: " + jwsFile); String jFile = outdir + File.separator + file.substring(0, file.length() - extension.length() + 1) + "java"; String cFile = outdir + File.separator + file.substring(0, file.length() - extension.length() + 1) + "class"; if (log.isDebugEnabled()) { log.debug("jFile: " + jFile); log.debug("cFile: " + cFile); log.debug("outdir: " + outdir); } File f1 = new File(cFile); String clsName = null; if (clsName == null) clsName = f2.getName(); if (clsName != null && clsName.charAt(0) == '/') clsName = clsName.substring(1); clsName = clsName.substring(0, clsName.length() - extension.length()); clsName = clsName.replace('/', '.'); if (log.isDebugEnabled()) log.debug("ClsName: " + clsName); if (!f1.exists() || f2.lastModified() > f1.lastModified()) { log.debug(Messages.getMessage("compiling00", jwsFile)); log.debug(Messages.getMessage("copy00", jwsFile, jFile)); FileReader fr = new FileReader(jwsFile); FileWriter fw = new FileWriter(jFile); char[] buf = new char[4096]; int rc; while ((rc = fr.read(buf, 0, 4095)) >= 0) fw.write(buf, 0, rc); fw.close(); fr.close(); log.debug("javac " + jFile); Compiler compiler = CompilerFactory.getCompiler(); compiler.setClasspath(ClasspathUtils.getDefaultClasspath(msgContext)); compiler.setDestination(outdir); compiler.addFile(jFile); boolean result = compiler.compile(); (new File(jFile)).delete(); if (!result) { (new File(cFile)).delete(); Document doc = XMLUtils.newDocument(); Element root = doc.createElementNS("", "Errors"); StringBuffer message = new StringBuffer("Error compiling "); message.append(jFile); message.append(":\n"); List errors = compiler.getErrors(); int count = errors.size(); for (int i = 0; i < count; i++) { CompilerError error = (CompilerError) errors.get(i); if (i > 0) message.append("\n"); message.append("Line "); message.append(error.getStartLine()); message.append(", column "); message.append(error.getStartColumn()); message.append(": "); message.append(error.getMessage()); } root.appendChild(doc.createTextNode(message.toString())); throw new AxisFault("Server.compileError", Messages.getMessage("badCompile00", jFile), null, new Element[] { root }); } ClassUtils.removeClassLoader(clsName); soapServices.remove(clsName); } ClassLoader cl = ClassUtils.getClassLoader(clsName); if (cl == null) { cl = new JWSClassLoader(clsName, msgContext.getClassLoader(), cFile); } msgContext.setClassLoader(cl); SOAPService rpc = (SOAPService) soapServices.get(clsName); if (rpc == null) { rpc = new SOAPService(new RPCProvider()); rpc.setName(clsName); rpc.setOption(RPCProvider.OPTION_CLASSNAME, clsName); rpc.setEngine(msgContext.getAxisEngine()); String allowed = (String) getOption(RPCProvider.OPTION_ALLOWEDMETHODS); if (allowed == null) allowed = "*"; rpc.setOption(RPCProvider.OPTION_ALLOWEDMETHODS, allowed); String scope = (String) getOption(RPCProvider.OPTION_SCOPE); if (scope == null) scope = Scope.DEFAULT.getName(); rpc.setOption(RPCProvider.OPTION_SCOPE, scope); rpc.getInitializedServiceDesc(msgContext); soapServices.put(clsName, rpc); } rpc.setEngine(msgContext.getAxisEngine()); rpc.init(); msgContext.setService(rpc); } if (log.isDebugEnabled()) { log.debug("Exit: JWSHandler::invoke"); } } Code Sample 2: private static String fetchImageViaHttp(URL imgUrl) throws IOException { String sURL = imgUrl.toString(); String imgFile = imgUrl.getPath(); HttpURLConnection cnx = (HttpURLConnection) imgUrl.openConnection(); String uri = null; try { cnx.setAllowUserInteraction(false); cnx.setDoOutput(true); cnx.addRequestProperty("Cache-Control", "no-cache"); RequestContext ctx = RequestContext.get(); if (ctx != null) cnx.addRequestProperty("User-Agent", ctx.header("user-agent")); else cnx.addRequestProperty("User-Agent", user_agent); cnx.addRequestProperty("Referer", sURL.substring(0, sURL.indexOf('/', sURL.indexOf('.')) + 1)); cnx.connect(); if (cnx.getResponseCode() != HttpURLConnection.HTTP_OK) return null; InputStream imgData = cnx.getInputStream(); String ext = FilenameUtils.getExtension(imgFile).toLowerCase(); if (!Multimedia.isImageFile("aa." + ext)) ext = "jpg"; uri = FMT_FN.format(new Date()) + RandomStringUtils.randomAlphanumeric(4) + '.' + ext; File fileDest = new File(img_path + uri); if (!fileDest.getParentFile().exists()) fileDest.getParentFile().mkdirs(); FileOutputStream fos = new FileOutputStream(fileDest); try { IOUtils.copy(imgData, fos); } finally { IOUtils.closeQuietly(imgData); IOUtils.closeQuietly(fos); } } finally { cnx.disconnect(); } return RequestContext.get().contextPath() + "/uploads/img/" + uri; }
00
Code Sample 1: public int unindexRecord(String uuid) throws SQLException, CatalogIndexException { Connection con = null; boolean autoCommit = true; PreparedStatement st = null; int nRows = 0; StringSet fids = new StringSet(); if (cswRemoteRepository.isActive()) { StringSet uuids = new StringSet(); uuids.add(uuid); fids = queryFileIdentifiers(uuids); } try { con = returnConnection().getJdbcConnection(); autoCommit = con.getAutoCommit(); con.setAutoCommit(false); String sSql = "DELETE FROM " + getResourceDataTableName() + " WHERE DOCUUID=?"; logExpression(sSql); st = con.prepareStatement(sSql); st.setString(1, uuid); nRows = st.executeUpdate(); con.commit(); } catch (SQLException ex) { if (con != null) { con.rollback(); } throw ex; } finally { closeStatement(st); if (con != null) { con.setAutoCommit(autoCommit); } } CatalogIndexAdapter indexAdapter = getCatalogIndexAdapter(); if (indexAdapter != null) { indexAdapter.deleteDocument(uuid); if (cswRemoteRepository.isActive()) { if (fids.size() > 0) cswRemoteRepository.onRecordsDeleted(fids); } } return nRows; } Code Sample 2: private static void copyFile(File f) { try { String baseName = baseDir.getCanonicalPath(); String fullPath = f.getCanonicalPath(); String nameSufix = fullPath.substring(baseName.length() + 1); File destFile = new File(FileDestDir, nameSufix); destFile.getParentFile().mkdirs(); destFile.createNewFile(); FileChannel fromChannel = new FileInputStream(f).getChannel(); FileChannel toChannel = new FileOutputStream(destFile).getChannel(); fromChannel.transferTo(0, fromChannel.size(), toChannel); fromChannel.close(); toChannel.close(); destFile.setLastModified(f.lastModified()); } catch (Exception e) { System.err.println(e.getMessage()); } }
00
Code Sample 1: private InputStream loadFromUrl(URL url, String contentType) throws IOException { Proxy proxy = null; if (isUseProxy) { Authenticator.setDefault(new Authenticator() { protected PasswordAuthentication getPasswordAuthentication() { return new PasswordAuthentication(proxyUser, proxyPassword.toCharArray()); } }); proxy = new Proxy(Proxy.Type.HTTP, new InetSocketAddress(proxyHost, proxyPort)); } else { proxy = Proxy.NO_PROXY; } URLConnection connection = url.openConnection(proxy); connection.setRequestProperty("Accept-Charset", DEFAULT_CHARSET); connection.setRequestProperty("Content-Type", contentType); connection.setRequestProperty("User-Agent", USER_AGENT); InputStream response = connection.getInputStream(); return response; } Code Sample 2: public void open(String server, String user, String pass, int port, String option) throws Exception { log.info("Login to FTP: " + server); this.port = port; ftp = new FTPClient(); ftp.connect(server, port); ftp.login(user, pass); checkReply("FTP server refused connection." + server); modeBINARY(); this.me = this; }
00
Code Sample 1: public String getResponse(URL url) throws OAuthException { try { HttpURLConnection connection = (HttpURLConnection) url.openConnection(); connection.connect(); BufferedReader in = new BufferedReader(new InputStreamReader(connection.getInputStream())); String inputLine; StringBuilder response = new StringBuilder(); while ((inputLine = in.readLine()) != null) { response.append(inputLine); } in.close(); return response.toString(); } catch (IOException e) { throw new OAuthException("Error getting HTTP response", e); } } Code Sample 2: public static List<String> retrieveLanguages() throws Exception { List<String> result = new ArrayList<String>(); URL url = new URL("http://translatewiki.net/w/i.php?title=Special:MessageGroupStats&group=out-osm-site"); String str = StreamUtil.toString(url.openStream()); Pattern pattern = Pattern.compile(".*language=([^;\"]+).*"); Matcher m = pattern.matcher(str); while (m.find()) { String lang = m.group(1); if (!result.contains(lang)) { result.add(lang); } } return result; }
00
Code Sample 1: public AssessmentItemType getAssessmentItemType(String filename) { if (filename.contains(" ") && (System.getProperty("os.name").contains("Windows"))) { File source = new File(filename); String tempDir = System.getenv("TEMP"); File dest = new File(tempDir + "/temp.xml"); MQMain.logger.info("Importing from " + dest.getAbsolutePath()); FileChannel in = null, out = null; try { in = new FileInputStream(source).getChannel(); out = new FileOutputStream(dest).getChannel(); long size = in.size(); MappedByteBuffer buf = in.map(FileChannel.MapMode.READ_ONLY, 0, size); out.write(buf); } catch (Exception e) { e.printStackTrace(); } finally { if (in != null) try { in.close(); } catch (IOException e) { e.printStackTrace(); } if (out != null) try { out.close(); } catch (IOException e) { e.printStackTrace(); } filename = tempDir + "/temp.xml"; } } AssessmentItemType assessmentItemType = null; JAXBElement<?> jaxbe = null; try { XMLReader reader = XMLReaderFactory.createXMLReader(); ChangeNamespace convertfromv2p0tov2p1 = new ChangeNamespace(reader, "http://www.imsglobal.org/xsd/imsqti_v2p0", "http://www.imsglobal.org/xsd/imsqti_v2p1"); SAXSource source = null; try { FileInputStream fis = new FileInputStream(filename); InputStreamReader isr = null; try { isr = new InputStreamReader(fis, "UTF-8"); } catch (UnsupportedEncodingException e) { } InputSource is = new InputSource(isr); source = new SAXSource(convertfromv2p0tov2p1, is); } catch (FileNotFoundException e) { MQMain.logger.error("SAX/getAssessmentItemType/file not found"); } jaxbe = (JAXBElement<?>) MQModel.qtiCf.unmarshal(MQModel.imsqtiUnmarshaller, source); assessmentItemType = (AssessmentItemType) jaxbe.getValue(); } catch (JAXBException e) { MQMain.logger.error("JAX/getAssessmentItemType", e); } catch (SAXException e) { MQMain.logger.error("SAX/getAssessmentItemType", e); } return assessmentItemType; } Code Sample 2: public void start(OutputStream bytes, Target target) throws IOException { URLConnection conn = url.openConnection(); InputStream fis = conn.getInputStream(); byte[] buf = new byte[4096]; while (true) { int bytesRead = fis.read(buf); if (bytesRead < 1) break; bytes.write(buf, 0, bytesRead); } fis.close(); }
00
Code Sample 1: public void login() { if (email.isEmpty() || pass.isEmpty()) { NotifyUtil.warn("Acount Data", "You need to specify and account e-mail and password.", false); return; } final ProgressHandle handle = ProgressHandleFactory.createHandle("Connecting to Facebook ..."); final Runnable task = new Runnable() { @Override public void run() { handle.start(); handle.switchToIndeterminate(); FacebookJsonRestClient client = new FacebookJsonRestClient(API_KEY, SECRET); client.setIsDesktop(true); HttpURLConnection connection; List<String> cookies; try { String token = client.auth_createToken(); String post_url = "http://www.facebook.com/login.php"; String get_url = "http://www.facebook.com/login.php" + "?api_key=" + API_KEY + "&v=1.0" + "&auth_token=" + token; HttpURLConnection.setFollowRedirects(true); connection = (HttpURLConnection) new URL(get_url).openConnection(); connection.setRequestMethod("GET"); connection.setRequestProperty("User-Agent", "Mozilla/5.0 (Windows; U; Windows NT 5.1; en-US; rv:1.9.2.3) Gecko/20100401"); connection.setRequestProperty("Host", "www.facebook.com"); connection.setRequestProperty("Accept-Charset", "UFT-8"); connection.connect(); cookies = connection.getHeaderFields().get("Set-Cookie"); connection = (HttpURLConnection) new URL(post_url).openConnection(); connection.setRequestMethod("POST"); connection.setRequestProperty("User-Agent", "Mozilla/5.0 (Windows; U; Windows NT 5.1; en-US; rv:1.9.2.3) Gecko/20100401"); connection.setRequestProperty("Host", "www.facebook.com"); connection.setRequestProperty("Accept-Charset", "UFT-8"); if (cookies != null) { for (String cookie : cookies) { connection.addRequestProperty("Cookie", cookie.split(";", 2)[0]); } } String params = "api_key=" + API_KEY + "&auth_token=" + token + "&email=" + URLEncoder.encode(email, "UTF-8") + "&pass=" + URLEncoder.encode(pass, "UTF-8") + "&v=1.0"; connection.setRequestProperty("Content-Length", Integer.toString(params.length())); connection.setRequestProperty("Content-Type", "application/x-www-form-urlencoded"); connection.setDoOutput(true); connection.connect(); connection.getOutputStream().write(params.toString().getBytes("UTF-8")); connection.getOutputStream().close(); cookies = connection.getHeaderFields().get("Set-Cookie"); if (cookies == null) { ActionListener listener = new ActionListener() { @Override public void actionPerformed(ActionEvent e) { String url = "http://www.chartsy.org/facebook/"; DesktopUtil.browseAndWarn(url, null); } }; NotifyUtil.show("Application Permission", "You need to grant permission first.", MessageType.WARNING, listener, false); connection.disconnect(); loggedIn = false; } else { sessionKey = client.auth_getSession(token); sessionSecret = client.getSessionSecret(); loggedIn = true; } connection.disconnect(); handle.finish(); } catch (FacebookException fex) { handle.finish(); NotifyUtil.error("Login Error", fex.getMessage(), fex, false); } catch (IOException ioex) { handle.finish(); NotifyUtil.error("Login Error", ioex.getMessage(), ioex, false); } } }; WindowManager.getDefault().invokeWhenUIReady(task); } Code Sample 2: @Override public Result sendSMS(String number, String text, Proxy proxy) { try { DefaultHttpClient client = new DefaultHttpClient(); if (proxy != null) { HttpHost prox = new HttpHost(proxy.host, proxy.port); client.getParams().setParameter(ConnRoutePNames.DEFAULT_PROXY, prox); } String target = "http://www.smsbilliger.de/free-sms.html"; HttpGet get = new HttpGet(target); HttpResponse response = client.execute(get); HttpEntity e = response.getEntity(); Document doc = ref.getDocumentFromInputStream(e.getContent()); List<Element> forms = ref.selectByXPathOnDocument(doc, "//<ns>FORM", doc.getRootElement().getNamespaceURI()); if (forms.size() == 0) return new Result(Result.SMS_LIMIT_REACHED); Element form = forms.get(0); List<NameValuePair> formparas = new ArrayList<NameValuePair>(); List<Element> inputs = ref.selectByXPathOnElement(form, "//<ns>INPUT|//<ns>TEXTAREA|//<ns>SELECT", form.getNamespaceURI()); Iterator<Element> it = inputs.iterator(); while (it.hasNext()) { Element input = it.next(); String type = input.getAttributeValue("type"); String name = input.getAttributeValue("name"); String value = input.getAttributeValue("value"); if (type != null && type.equals("hidden")) { formparas.add(new BasicNameValuePair(name, value)); } else if (name != null && name.equals(FORM_NUMBER)) { formparas.add(new BasicNameValuePair(name, this.getNumberPart(number))); } else if (name != null && name.equals(FORM_TEXT)) { formparas.add(new BasicNameValuePair(name, text)); } else if (name != null && name.equals(FORM_AGB)) { formparas.add(new BasicNameValuePair(name, "true")); } } formparas.add(new BasicNameValuePair("dialing_code", this.getPrefixPart(number))); formparas.add(new BasicNameValuePair("no_schedule", "yes")); List<Element> captchas = ref.selectByXPathOnDocument(doc, "//<ns>IMG[@id='code_img']", doc.getRootElement().getNamespaceURI()); Element captcha = captchas.get(0); String url = "http://www.smsbilliger.de/" + captcha.getAttributeValue("src"); HttpGet imgcall = new HttpGet(url); HttpResponse imgres = client.execute(imgcall); HttpEntity imge = imgres.getEntity(); BufferedImage img = ImageIO.read(imge.getContent()); imge.getContent().close(); Icon icon = new ImageIcon(img); String result = (String) JOptionPane.showInputDialog(null, "Bitte Captcha eingeben:", "Captcha", JOptionPane.INFORMATION_MESSAGE, icon, null, ""); formparas.add(new BasicNameValuePair(FORM_CAPTCHA, result)); UrlEncodedFormEntity entity = new UrlEncodedFormEntity(formparas, "UTF-8"); HttpPost post = new HttpPost(target); post.setEntity(entity); response = client.execute(post); e = response.getEntity(); doc = ref.getDocumentFromInputStream(e.getContent()); List<Element> fonts = ref.selectByXPathOnDocument(doc, "//<ns>H3", doc.getRootElement().getNamespaceURI()); Iterator<Element> it2 = fonts.iterator(); while (it2.hasNext()) { Element font = it2.next(); String txt = font.getText(); if (txt.contains("Die SMS wurde erfolgreich versendet.")) { return new Result(Result.SMS_SEND); } } } catch (ClientProtocolException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } catch (IllegalStateException e) { e.printStackTrace(); } catch (SAXException e) { e.printStackTrace(); } catch (JDOMException e) { e.printStackTrace(); } return new Result(Result.UNKNOWN_ERROR); }
11
Code Sample 1: private void copyFile(File src_file, File dest_file) { InputStream src_stream = null; OutputStream dest_stream = null; try { int b; src_stream = new BufferedInputStream(new FileInputStream(src_file)); dest_stream = new BufferedOutputStream(new FileOutputStream(dest_file)); while ((b = src_stream.read()) != -1) dest_stream.write(b); } catch (Exception e) { XRepository.getLogger().warning(this, "Error on copying the plugin file!"); XRepository.getLogger().warning(this, e); } finally { try { src_stream.close(); dest_stream.close(); } catch (Exception ex2) { } } } Code Sample 2: public static void copy(File source, File dest) throws IOException { FileChannel in = null, out = null; try { in = new FileInputStream(source).getChannel(); out = new FileOutputStream(dest).getChannel(); long size = in.size(); MappedByteBuffer buf = in.map(FileChannel.MapMode.READ_ONLY, 0, size); out.write(buf); } finally { if (in != null) in.close(); if (out != null) out.close(); } }
00
Code Sample 1: public void SetRoles(Connection conn, User user, String[] roles) throws NpsException { if (!IsSysAdmin() && !IsLocalAdmin()) throw new NpsException(ErrorHelper.ACCESS_NOPRIVILEGE); PreparedStatement pstmt = null; ResultSet rs = null; try { String sql = "delete from userrole where userid=?"; pstmt = conn.prepareStatement(sql); pstmt.setString(1, user.id); pstmt.executeUpdate(); if (roles != null && roles.length > 0) { try { pstmt.close(); } catch (Exception e1) { } sql = "insert into userrole(userid,roleid) values(?,?)"; pstmt = conn.prepareStatement(sql); for (int i = 0; i < roles.length; i++) { if (roles[i] != null && roles[i].length() > 0) { pstmt.setString(1, user.GetId()); pstmt.setString(2, roles[i]); pstmt.executeUpdate(); } } } try { pstmt.close(); } catch (Exception e1) { } if (user.roles_by_name != null) user.roles_by_name.clear(); if (user.roles_by_id != null) user.roles_by_id.clear(); if (roles != null && roles.length > 0) { sql = "select b.* from UserRole a,Role b where a.roleid = b.id and a.userid=?"; pstmt = conn.prepareStatement(sql); pstmt.setString(1, user.id); rs = pstmt.executeQuery(); while (rs.next()) { if (user.roles_by_name == null) user.roles_by_name = new Hashtable(); if (user.roles_by_id == null) user.roles_by_id = new Hashtable(); user.roles_by_name.put(rs.getString("name"), rs.getString("id")); user.roles_by_id.put(rs.getString("id"), rs.getString("name")); } } } catch (Exception e) { try { conn.rollback(); } catch (Exception e1) { } com.microfly.util.DefaultLog.error(e); } finally { if (rs != null) try { rs.close(); } catch (Exception e) { } if (pstmt != null) try { pstmt.close(); } catch (Exception e1) { } } } Code Sample 2: private BinaryDocument documentFor(String code, String type, int diagramIndex) { code = code.replaceAll("\n", "").replaceAll("\t", "").trim().replaceAll(" ", "%20"); StringBuilder builder = new StringBuilder("http://yuml.me/diagram/"); builder.append(type).append("/"); builder.append(code); URL url; try { url = new URL(builder.toString()); String name = "uml" + diagramIndex + ".png"; diagramIndex++; BinaryDocument pic = new BinaryDocument(name, "image/png"); IOUtils.copy(url.openStream(), pic.getContent().getOutputStream()); return pic; } catch (MalformedURLException e) { throw ManagedIOException.manage(e); } catch (IOException e) { throw ManagedIOException.manage(e); } }
00
Code Sample 1: public void actionPerformed(ActionEvent ae) { String actionCommand = ae.getActionCommand(); if (actionCommand == null) { return; } if (DataManager.SHOW_DEBUG) { System.out.println("Action command : " + actionCommand); } DataManager dataManager = ClientDirector.getDataManager(); PlayerImpl myPlayer = dataManager.getMyPlayer(); if (!myPlayer.getLocation().isRoom() && actionCommand.equals("createChatRoom")) { JOptionPane.showMessageDialog(null, "Sorry, but you can not create/leave chat channels\n" + "on World/Town Maps.", "INFORMATION", JOptionPane.INFORMATION_MESSAGE); return; } if (actionCommand.equals("createChatRoom")) { WotlasLocation chatRoomLocation = myPlayer.getLocation(); String chatRoomName = JOptionPane.showInputDialog("Please enter a Name:"); if (chatRoomName == null || chatRoomName.length() == 0) { return; } if (this.tabbedPane.getTabCount() >= ChatRoom.MAXIMUM_CHATROOMS_PER_ROOM - 1) { this.b_createChatRoom.setEnabled(false); } else { this.b_createChatRoom.setEnabled(true); } myPlayer.sendMessage(new ChatRoomCreationMessage(chatRoomName, myPlayer.getPrimaryKey())); } else if (actionCommand.equals("leaveChatRoom")) { if (!this.currentPrimaryKey.equals(ChatRoom.DEFAULT_CHAT)) { myPlayer.sendMessage(new RemPlayerFromChatRoomMessage(myPlayer.getPrimaryKey(), this.currentPrimaryKey)); } } else if (actionCommand.equals("helpChat")) { DataManager dManager = ClientDirector.getDataManager(); dManager.sendMessage(new SendTextMessage(dManager.getMyPlayer().getPrimaryKey(), dManager.getMyPlayer().getPlayerName(), getMyCurrentChatPrimaryKey(), "/help", ChatRoom.NORMAL_VOICE_LEVEL)); } else if (actionCommand.equals("imageChat")) { String imageURL = JOptionPane.showInputDialog("Please enter your image's URL:\nExample: http://wotlas.sf.net/images/wotlas.gif"); if (imageURL == null || imageURL.length() == 0) { return; } try { URL url = new URL(imageURL); URLConnection urlC = url.openConnection(); urlC.connect(); String ctype = urlC.getContentType(); if (!ctype.startsWith("image/")) { JOptionPane.showMessageDialog(null, "The specified URL does not refer to an image !", "Information", JOptionPane.INFORMATION_MESSAGE); return; } if (urlC.getContentLength() > 50 * 1024) { JOptionPane.showMessageDialog(null, "The specified image is too big (above 50kB).", "Information", JOptionPane.INFORMATION_MESSAGE); return; } } catch (Exception ex) { Debug.signal(Debug.ERROR, this, "Failed to get image: " + ex); JOptionPane.showMessageDialog(null, "Failed to get the specified image...\nCheck your URL.", "Error", JOptionPane.ERROR_MESSAGE); return; } DataManager dManager = ClientDirector.getDataManager(); dManager.sendMessage(new SendTextMessage(dManager.getMyPlayer().getPrimaryKey(), dManager.getMyPlayer().getPlayerName(), getMyCurrentChatPrimaryKey(), "<img src='" + imageURL + "'>", ChatRoom.NORMAL_VOICE_LEVEL)); } else { if (DataManager.SHOW_DEBUG) { System.out.println("Err : unknown actionCommand"); System.out.println("No action command found!"); } } } Code Sample 2: private void harvest() throws IOException, XMLStreamException { String api_url = "http://search.twitter.com/search.atom?q=+%23" + hashtag + "+to%3A" + account; System.err.println(api_url); URL url = new URL(api_url); URLConnection con = url.openConnection(); String basic = this.login + ":" + new String(this.password); con.setRequestProperty("Authorization", "Basic " + Base64.encode(basic)); XMLInputFactory factory = XMLInputFactory.newInstance(); factory.setProperty(XMLInputFactory.IS_NAMESPACE_AWARE, true); factory.setProperty(XMLInputFactory.IS_VALIDATING, false); factory.setProperty(XMLInputFactory.IS_SUPPORTING_EXTERNAL_ENTITIES, false); XMLEventReader reader = factory.createXMLEventReader(con.getInputStream()); boolean inEntry = false; boolean inAuthor = false; String published = null; String title = null; String foafName = null; String foafURI = null; String link = null; while (reader.hasNext()) { XMLEvent evt = reader.nextEvent(); if (evt.isStartElement()) { StartElement e = evt.asStartElement(); QName qName = e.getName(); if (!inEntry && Atom.NS.equals(qName.getNamespaceURI()) && qName.getLocalPart().equals("entry")) { inEntry = true; } else if (inEntry) { String local = qName.getLocalPart(); if (local.equals("published")) { published = reader.getElementText(); } else if (local.equals("title")) { title = reader.getElementText(); } else if (link == null && local.equals("link")) { Attribute att = e.getAttributeByName(new QName("type")); if (att != null && att.getValue().equals("text/html")) { att = e.getAttributeByName(new QName("href")); if (att != null) { link = att.getValue(); } } } else if (local.equals("author")) { inAuthor = true; } else if (inAuthor && local.equals("name")) { foafName = reader.getElementText(); } else if (inAuthor && local.equals("uri")) { foafURI = reader.getElementText(); } } } else if (evt.isEndElement()) { EndElement e = evt.asEndElement(); QName qName = e.getName(); if (inEntry && Atom.NS.equals(qName.getNamespaceURI())) { String local = qName.getLocalPart(); if (local.equals("entry")) { Protein p1 = null; Protein p2 = null; PubmedEntry pubmed = null; boolean valid = title != null && published != null; String tokens[] = title == null ? new String[0] : title.trim().split("[ \t\n\r]+"); if (valid && tokens.length != 5) { System.err.println("Ignoring " + title); valid = false; } if (valid && !tokens[0].equals("@" + account)) { System.err.println("Ignoring " + title + " doesn't start with @" + account); valid = false; } if (valid && !(tokens[1].startsWith("gi:") && Cast.Integer.isA(tokens[1].substring(3)))) { System.err.println("Ignoring " + title + " not a gi:###"); valid = false; } if (valid && (p1 = fetchProtein(Integer.parseInt(tokens[1].substring(3)))) == null) { valid = false; } if (valid && !(tokens[2].startsWith("gi:") && Cast.Integer.isA(tokens[2].substring(3)))) { System.err.println("Ignoring " + title + " not a gi:###"); valid = false; } if (valid && (p2 = fetchProtein(Integer.parseInt(tokens[2].substring(3)))) == null) { valid = false; } if (valid && !(tokens[3].startsWith("pmid:") && Cast.Integer.isA(tokens[3].substring(5)))) { System.err.println("Ignoring " + title + " not a pmid:###"); valid = false; } if (valid && (pubmed = fetchPubmedEntry(Integer.parseInt(tokens[3].substring(5)))) == null) { valid = false; } if (valid && !tokens[4].equals("#" + hashtag)) { System.err.println("Ignoring " + title + " doesn't end with #" + hashtag); valid = false; } if (valid && p1 != null && p2 != null && pubmed != null && foafName != null && foafURI != null) { exportFoaf(foafName, foafURI); exportGi(p1); exportGi(p2); exportPubmed(pubmed); System.out.println("<Interaction rdf:about=\"" + link + "\">"); System.out.println(" <interactor rdf:resource=\"lsid:ncbi.nlm.nih.gov:protein:" + p1.gi + "\"/>"); System.out.println(" <interactor rdf:resource=\"lsid:ncbi.nlm.nih.gov:protein:" + p2.gi + "\"/>"); System.out.println(" <reference rdf:resource=\"http://www.ncbi.nlm.nih.gov/pubmed/" + pubmed.pmid + "\"/>"); System.out.println(" <dc:creator rdf:resource=\"" + foafURI + "\"/>"); System.out.println(" <dc:date>" + escape(published) + "</dc:date>"); System.out.println("</Interaction>"); } inEntry = false; title = null; foafName = null; foafURI = null; inAuthor = false; published = null; link = null; } else if (inAuthor && local.equals("author")) { inAuthor = false; } } } } reader.close(); }
00
Code Sample 1: protected String getLibJSCode() throws IOException { if (cachedLibJSCode == null) { InputStream is = getClass().getResourceAsStream(JS_LIB_FILE); StringWriter output = new StringWriter(); IOUtils.copy(is, output); cachedLibJSCode = output.toString(); } return cachedLibJSCode; } Code Sample 2: public void fetchDataByID(String id) throws IOException, SAXException { URL url = new URL(urlHistoryStockPrice + id); URLConnection con = url.openConnection(); con.setConnectTimeout(20000); InputStream is = con.getInputStream(); byte[] bs = new byte[1024]; int len; OutputStream os = new FileOutputStream(dataPath + id + ".csv"); while ((len = is.read(bs)) != -1) { os.write(bs, 0, len); } os.flush(); os.close(); is.close(); con = null; url = null; }
00
Code Sample 1: private void sendMessages() { Configuration conf = Configuration.getInstance(); for (int i = 0; i < errors.size(); i++) { String msg = null; synchronized (this) { msg = errors.get(i); if (DEBUG) System.out.println(msg); errors.remove(i); } if (!conf.getCustomerFeedback()) continue; if (conf.getApproveCustomerFeedback()) { ConfirmCustomerFeedback dialog = new ConfirmCustomerFeedback(JOptionPane.getFrameForComponent(SqlTablet.getInstance()), msg); if (dialog.getResult() == ConfirmCustomerFeedback.Result.NO) continue; } try { URL url = new URL("http://www.sqltablet.com/beta/bug.php"); URLConnection urlc = url.openConnection(); urlc.setDoOutput(true); urlc.setDoOutput(true); urlc.setRequestProperty("Content-Type", "application/x-www-form-urlencoded"); DataOutputStream out = new DataOutputStream(urlc.getOutputStream()); String lines[] = msg.split("\n"); for (int l = 0; l < lines.length; l++) { String line = (l > 0 ? "&line" : "line") + l + "="; line += URLEncoder.encode(lines[l], "UTF-8"); out.write(line.getBytes()); } out.flush(); out.close(); BufferedReader in = new BufferedReader(new InputStreamReader(urlc.getInputStream())); String line; while ((line = in.readLine()) != null) { if (DEBUG) System.out.println("RemoteLogger : " + line + "\n"); } in.close(); } catch (MalformedURLException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } } } Code Sample 2: public CountModel(URL url) throws IOException { BufferedReader in = new BufferedReader(new InputStreamReader(url.openStream())); String line; list = new ArrayList<CountModelItem>(); map = new HashMap<String, CountModelItem>(); line = in.readLine(); int n = 1; String[] rowAttrib; CountModelItem item; while ((line = in.readLine()) != null) { rowAttrib = line.split(";"); item = new CountModelItem(n, Integer.valueOf(rowAttrib[1]).intValue(), Integer.valueOf(rowAttrib[2]).intValue(), Integer.valueOf(rowAttrib[3]).intValue(), rowAttrib[0]); list.add(item); map.put(item.getHash(), item); n++; } in.close(); }
11
Code Sample 1: public synchronized String getSerialNumber() { if (serialNum != null) return serialNum; final StringBuffer buf = new StringBuffer(); Iterator it = classpath.iterator(); while (it.hasNext()) { ClassPathEntry entry = (ClassPathEntry) it.next(); buf.append(entry.getResourceURL().toString()); buf.append(":"); } serialNum = (String) AccessController.doPrivileged(new PrivilegedAction() { public Object run() { try { MessageDigest digest = MessageDigest.getInstance("SHA"); digest.update(buf.toString().getBytes()); byte[] data = digest.digest(); serialNum = new BASE64Encoder().encode(data); return serialNum; } catch (NoSuchAlgorithmException exp) { BootSecurityManager.securityLogger.log(Level.SEVERE, exp.getMessage(), exp); return buf.toString(); } } }); return serialNum; } Code Sample 2: private void getRandomGUID(boolean secure) { MessageDigest md5 = null; StringBuffer sbValueBeforeMD5 = new StringBuffer(); try { md5 = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException e) { System.out.println("Error: " + e); } try { long time = System.currentTimeMillis(); long rand = 0; if (secure) { rand = mySecureRand.nextLong(); } else { rand = myRand.nextLong(); } sbValueBeforeMD5.append(s_id); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(time)); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(rand)); valueBeforeMD5 = sbValueBeforeMD5.toString(); md5.update(valueBeforeMD5.getBytes()); byte[] array = md5.digest(); StringBuffer sb = new StringBuffer(); for (int j = 0; j < array.length; ++j) { int b = array[j] & 0xFF; if (b < 0x10) sb.append('0'); sb.append(Integer.toHexString(b)); } valueAfterMD5 = sb.toString(); } catch (Exception e) { System.out.println("Error:" + e); } }
00
Code Sample 1: private void createIDocPluginProject(IProgressMonitor monitor, String sourceFileName, String pluginName, String pluginNameJCo) throws CoreException, IOException { monitor.subTask(MessageFormat.format(Messages.ProjectGenerator_CreatePluginTaskDescription, pluginName)); final Map<String, byte[]> files = readArchiveFile(sourceFileName); monitor.worked(10); IProject project = workspaceRoot.getProject(pluginName); if (project.exists()) { project.delete(true, true, new SubProgressMonitor(monitor, 5)); } else { monitor.worked(5); } project.create(new SubProgressMonitor(monitor, 5)); project.open(new SubProgressMonitor(monitor, 5)); IProjectDescription description = project.getDescription(); description.setNatureIds(new String[] { JavaCore.NATURE_ID, PLUGIN_NATURE_ID }); project.setDescription(description, new SubProgressMonitor(monitor, 5)); IJavaProject javaProject = JavaCore.create(project); IFolder binDir = project.getFolder("bin"); IPath binPath = binDir.getFullPath(); javaProject.setOutputLocation(binPath, new SubProgressMonitor(monitor, 5)); project.getFile("sapidoc3.jar").create(new ByteArrayInputStream(files.get("sapidoc3.jar")), true, new SubProgressMonitor(monitor, 15)); IFolder metaInfFolder = project.getFolder("META-INF"); metaInfFolder.create(true, true, new SubProgressMonitor(monitor, 5)); StringBuilder manifest = new StringBuilder(); manifest.append("Manifest-Version: 1.0\n"); manifest.append("Bundle-ManifestVersion: 2\n"); manifest.append("Bundle-Name: SAP IDoc Library v3\n"); manifest.append(MessageFormat.format("Bundle-SymbolicName: {0}\n", pluginName)); manifest.append("Bundle-Version: 7.11.0\n"); manifest.append("Bundle-ClassPath: bin/,\n"); manifest.append(" sapidoc3.jar\n"); manifest.append("Bundle-Vendor: SAP AG, Walldorf (packaged using RCER)\n"); manifest.append("Bundle-RequiredExecutionEnvironment: J2SE-1.5\n"); manifest.append("Export-Package: com.sap.conn.idoc,\n"); manifest.append(" com.sap.conn.idoc.jco,\n"); manifest.append(" com.sap.conn.idoc.rt.cp,\n"); manifest.append(" com.sap.conn.idoc.rt.record,\n"); manifest.append(" com.sap.conn.idoc.rt.record.impl,\n"); manifest.append(" com.sap.conn.idoc.rt.trace,\n"); manifest.append(" com.sap.conn.idoc.rt.util,\n"); manifest.append(" com.sap.conn.idoc.rt.xml\n"); manifest.append("Bundle-ActivationPolicy: lazy\n"); manifest.append(MessageFormat.format("Require-Bundle: {0}\n", pluginNameJCo)); writeTextFile(monitor, manifest, metaInfFolder.getFile("MANIFEST.MF")); final IPath jcoPath = new Path(MessageFormat.format("/{0}/sapidoc3.jar", pluginName)); IClasspathEntry jcoEntry = JavaCore.newLibraryEntry(jcoPath, Path.EMPTY, Path.EMPTY, true); javaProject.setRawClasspath(new IClasspathEntry[] { jcoEntry }, new SubProgressMonitor(monitor, 5)); StringBuilder buildProperties = new StringBuilder(); buildProperties.append("bin.includes = META-INF/,\\\n"); buildProperties.append(" sapidoc3.jar,\\\n"); buildProperties.append(" .\n"); writeTextFile(monitor, buildProperties, project.getFile("build.properties")); exportableBundles.add(modelManager.findModel(project)); } Code Sample 2: public void initialize(AtomPropsMenu menu) { propertiesMenu = menu; if (shieldings == null) { try { URL url = this.getClass().getClassLoader().getResource(RF); InputStreamReader isr = new InputStreamReader(url.openStream()); BufferedReader br = new BufferedReader(isr); SharcReader sr1 = new SharcReader(br); shieldings = new Hashtable(); while (sr1.hasNext()) { SharcShielding ss1 = sr1.next(); shieldings.put(ss1.getMethod(), ss1); } String[] shieldingNames = new String[shieldings.size()]; int i = 0; Enumeration k = shieldings.keys(); while (k.hasMoreElements()) { shieldingNames[i] = (String) k.nextElement(); i++; } dialog = new SelectSharcReference(null, shieldingNames, true); } catch (Exception ex) { shieldings = null; } } }
00
Code Sample 1: public void setFlag(Flags.Flag oFlg, boolean bFlg) throws MessagingException { String sColunm; super.setFlag(oFlg, bFlg); if (oFlg.equals(Flags.Flag.ANSWERED)) sColunm = DB.bo_answered; else if (oFlg.equals(Flags.Flag.DELETED)) sColunm = DB.bo_deleted; else if (oFlg.equals(Flags.Flag.DRAFT)) sColunm = DB.bo_draft; else if (oFlg.equals(Flags.Flag.FLAGGED)) sColunm = DB.bo_flagged; else if (oFlg.equals(Flags.Flag.RECENT)) sColunm = DB.bo_recent; else if (oFlg.equals(Flags.Flag.SEEN)) sColunm = DB.bo_seen; else sColunm = null; if (null != sColunm && oFolder instanceof DBFolder) { JDCConnection oConn = null; PreparedStatement oUpdt = null; try { oConn = ((DBFolder) oFolder).getConnection(); String sSQL = "UPDATE " + DB.k_mime_msgs + " SET " + sColunm + "=" + (bFlg ? "1" : "0") + " WHERE " + DB.gu_mimemsg + "='" + getMessageGuid() + "'"; if (DebugFile.trace) DebugFile.writeln("Connection.prepareStatement(" + sSQL + ")"); oUpdt = oConn.prepareStatement(sSQL); oUpdt.executeUpdate(); oUpdt.close(); oUpdt = null; oConn.commit(); oConn = null; } catch (SQLException e) { if (null != oConn) { try { oConn.rollback(); } catch (Exception ignore) { } } if (null != oUpdt) { try { oUpdt.close(); } catch (Exception ignore) { } } if (DebugFile.trace) DebugFile.decIdent(); throw new MessagingException(e.getMessage(), e); } } } Code Sample 2: private static void readAndRewrite(File inFile, File outFile) throws IOException { ImageInputStream iis = ImageIO.createImageInputStream(new BufferedInputStream(new FileInputStream(inFile))); DcmParser dcmParser = DcmParserFactory.getInstance().newDcmParser(iis); Dataset ds = DcmObjectFactory.getInstance().newDataset(); dcmParser.setDcmHandler(ds.getDcmHandler()); dcmParser.parseDcmFile(null, Tags.PixelData); PixelDataReader pdReader = pdFact.newReader(ds, iis, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR()); System.out.println("reading " + inFile + "..."); pdReader.readPixelData(false); ImageOutputStream out = ImageIO.createImageOutputStream(new BufferedOutputStream(new FileOutputStream(outFile))); DcmEncodeParam dcmEncParam = DcmEncodeParam.IVR_LE; ds.writeDataset(out, dcmEncParam); ds.writeHeader(out, dcmEncParam, Tags.PixelData, dcmParser.getReadVR(), dcmParser.getReadLength()); System.out.println("writing " + outFile + "..."); PixelDataWriter pdWriter = pdFact.newWriter(pdReader.getPixelDataArray(), false, ds, out, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR()); pdWriter.writePixelData(); out.flush(); out.close(); System.out.println("done!"); }
11
Code Sample 1: public static List importSymbols(List symbols) throws ImportExportException { List quotes = new ArrayList(); String URLString = constructURL(symbols); IDQuoteFilter filter = new YahooIDQuoteFilter(); PreferencesManager.ProxyPreferences proxyPreferences = PreferencesManager.loadProxySettings(); try { URL url = new URL(URLString); InputStreamReader input = new InputStreamReader(url.openStream()); BufferedReader bufferedInput = new BufferedReader(input); String line; do { line = bufferedInput.readLine(); if (line != null) { try { IDQuote quote = filter.toIDQuote(line); quote.verify(); quotes.add(quote); } catch (QuoteFormatException e) { } } } while (line != null); bufferedInput.close(); } catch (BindException e) { throw new ImportExportException(Locale.getString("UNABLE_TO_CONNECT_ERROR", e.getMessage())); } catch (ConnectException e) { throw new ImportExportException(Locale.getString("UNABLE_TO_CONNECT_ERROR", e.getMessage())); } catch (UnknownHostException e) { throw new ImportExportException(Locale.getString("UNKNOWN_HOST_ERROR", e.getMessage())); } catch (NoRouteToHostException e) { throw new ImportExportException(Locale.getString("DESTINATION_UNREACHABLE_ERROR", e.getMessage())); } catch (MalformedURLException e) { throw new ImportExportException(Locale.getString("INVALID_PROXY_ERROR", proxyPreferences.host, proxyPreferences.port)); } catch (FileNotFoundException e) { throw new ImportExportException(Locale.getString("ERROR_DOWNLOADING_QUOTES")); } catch (IOException e) { throw new ImportExportException(Locale.getString("ERROR_DOWNLOADING_QUOTES")); } return quotes; } Code Sample 2: @Override public void doHandler(HttpServletRequest request, HttpServletResponse response) throws IOException, ServletException { if (request.getRequestURI().indexOf(".swf") != -1) { String fullUrl = (String) request.getAttribute("fullUrl"); fullUrl = urlTools.urlFilter(fullUrl, true); response.setCharacterEncoding("gbk"); response.setContentType("application/x-shockwave-flash"); PrintWriter out = response.getWriter(); try { URL url = new URL(fullUrl); BufferedReader in = new BufferedReader(new InputStreamReader(url.openStream(), "gbk")); fileEditor.pushStream(out, in, null, true); } catch (Exception e) { } out.flush(); } else if (request.getRequestURI().indexOf(".xml") != -1) { response.setContentType("text/xml"); PrintWriter out = response.getWriter(); try { URL url = new URL("http://" + configCenter.getUcoolOnlineIp() + request.getRequestURI()); BufferedReader in = new BufferedReader(new InputStreamReader(url.openStream())); fileEditor.pushStream(out, in, null, true); } catch (Exception e) { } out.flush(); } }
00
Code Sample 1: public static Document send(final String urlAddress) { Document responseMessage = null; try { URL url = new URL(urlAddress); HttpURLConnection connection = (HttpURLConnection) url.openConnection(); connection.setAllowUserInteraction(false); int response = connection.getResponseCode(); if (response == HttpURLConnection.HTTP_OK) { String contentType = connection.getContentType(); if (contentType != null && contentType.startsWith("text/html")) { InputStream inputStream = connection.getInputStream(); responseMessage = XmlUtils.fromStream(inputStream); } else { responseMessage = XmlUtils.newDocument(); Element responseElement = XmlUtils.createElement(responseMessage, "rsp"); Element messageElement = XmlUtils.createElement(responseElement, "message"); messageElement.setTextContent(String.valueOf(connection.getResponseCode())); Element commentElement = XmlUtils.createElement(responseElement, "comment"); commentElement.setTextContent(contentType); } } else { responseMessage = XmlUtils.newDocument(); Element responseElement = XmlUtils.createElement(responseMessage, "rsp"); Element messageElement = XmlUtils.createElement(responseElement, "message"); messageElement.setTextContent(String.valueOf(connection.getResponseCode())); Element commentElement = XmlUtils.createElement(responseElement, "comment"); commentElement.setTextContent(connection.getResponseMessage()); } } catch (Exception e) { e.printStackTrace(); } return responseMessage; } Code Sample 2: public void testEmptyBlock_01() throws Exception { EXISchema corpus = EXISchemaFactoryTestUtil.getEXISchema("/compression/emptyBlock_01.xsd", getClass(), m_compilerErrors); Assert.assertEquals(0, m_compilerErrors.getTotalCount()); GrammarCache grammarCache = new GrammarCache(corpus, GrammarOptions.STRICT_OPTIONS); Transmogrifier encoder = new Transmogrifier(); EXIDecoder decoder = new EXIDecoder(31); Scanner scanner; InputSource inputSource; encoder.setOutputOptions(HeaderOptionsOutputType.lessSchemaId); encoder.setAlignmentType(AlignmentType.compress); encoder.setBlockSize(1); encoder.setEXISchema(grammarCache); ByteArrayOutputStream baos = new ByteArrayOutputStream(); encoder.setOutputStream(baos); URL url = resolveSystemIdAsURL("/compression/emptyBlock_01.xml"); inputSource = new InputSource(url.toString()); inputSource.setByteStream(url.openStream()); byte[] bts; int n_events; encoder.encode(inputSource); bts = baos.toByteArray(); decoder.setEXISchema(grammarCache); decoder.setInputStream(new ByteArrayInputStream(bts)); scanner = decoder.processHeader(); ArrayList<EXIEvent> exiEventList = new ArrayList<EXIEvent>(); EXIEvent exiEvent; n_events = 0; while ((exiEvent = scanner.nextEvent()) != null) { ++n_events; exiEventList.add(exiEvent); } Assert.assertEquals(11, n_events); Assert.assertEquals(1, ((ChannellingScanner) scanner).getBlockCount()); EventType eventType; EventTypeList eventTypeList; int pos = 0; exiEvent = exiEventList.get(pos++); Assert.assertEquals(EXIEvent.EVENT_SD, exiEvent.getEventVariety()); eventType = exiEvent.getEventType(); Assert.assertSame(exiEvent, eventType); Assert.assertEquals(0, eventType.getIndex()); eventTypeList = eventType.getEventTypeList(); Assert.assertNull(eventTypeList.getEE()); exiEvent = exiEventList.get(pos++); Assert.assertEquals(EXIEvent.EVENT_SE, exiEvent.getEventVariety()); Assert.assertEquals("root", exiEvent.getName()); Assert.assertEquals("", eventType.getURI()); exiEvent = exiEventList.get(pos++); Assert.assertEquals(EXIEvent.EVENT_SE, exiEvent.getEventVariety()); Assert.assertEquals("parent", exiEvent.getName()); Assert.assertEquals("", eventType.getURI()); exiEvent = exiEventList.get(pos++); Assert.assertEquals(EXIEvent.EVENT_SE, exiEvent.getEventVariety()); Assert.assertEquals("child", exiEvent.getName()); Assert.assertEquals("", eventType.getURI()); exiEvent = exiEventList.get(pos++); Assert.assertEquals(EXIEvent.EVENT_CH, exiEvent.getEventVariety()); Assert.assertEquals("42", exiEvent.getCharacters().makeString()); int tp = ((EventTypeSchema) exiEvent.getEventType()).getSchemaSubstance(); Assert.assertEquals(EXISchemaConst.UNSIGNED_BYTE_TYPE, corpus.getSerialOfType(tp)); exiEvent = exiEventList.get(pos++); Assert.assertEquals(EXIEvent.EVENT_EE, exiEvent.getEventVariety()); exiEvent = exiEventList.get(pos++); Assert.assertEquals(EXIEvent.EVENT_EE, exiEvent.getEventVariety()); exiEvent = exiEventList.get(pos++); Assert.assertEquals(EXIEvent.EVENT_SE, exiEvent.getEventVariety()); Assert.assertEquals("adjunct", exiEvent.getName()); Assert.assertEquals("", exiEvent.getURI()); exiEvent = exiEventList.get(pos++); Assert.assertEquals(EXIEvent.EVENT_EE, exiEvent.getEventVariety()); exiEvent = exiEventList.get(pos++); Assert.assertEquals(EXIEvent.EVENT_EE, exiEvent.getEventVariety()); exiEvent = exiEventList.get(pos++); Assert.assertEquals(EXIEvent.EVENT_ED, exiEvent.getEventVariety()); }
00
Code Sample 1: public File copyFile(File f) throws IOException { File t = createNewFile("fm", "cpy"); FileOutputStream fos = new FileOutputStream(t); FileChannel foc = fos.getChannel(); FileInputStream fis = new FileInputStream(f); FileChannel fic = fis.getChannel(); foc.transferFrom(fic, 0, fic.size()); foc.close(); fic.close(); return t; } Code Sample 2: public void logout(String cookieString) throws NetworkException { HttpClient client = HttpConfig.newInstance(); HttpGet get = new HttpGet(HttpConfig.bbsURL() + HttpConfig.BBS_LOGOUT); if (cookieString != null && cookieString.length() != 0) get.setHeader("Cookie", cookieString); try { HttpResponse response = client.execute(get); if (response != null && response.getEntity() != null) { HTTPUtil.consume(response.getEntity()); } } catch (Exception e) { e.printStackTrace(); throw new NetworkException(e); } }
11
Code Sample 1: public void copyDependancyFiles() { for (String[] depStrings : getDependancyFiles()) { String source = depStrings[0]; String target = depStrings[1]; try { File sourceFile = PluginManager.getFile(source); IOUtils.copyEverything(sourceFile, new File(WEB_ROOT + target)); } catch (URISyntaxException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } } } Code Sample 2: public void execute() throws MojoExecutionException, MojoFailureException { try { this.getLog().info("copy source web.xml - " + this.getWebXml() + " to build dir (source web.xml required if mergewebxml execution is enabled)"); File destination = new File(this.getBuildDir(), "web.xml"); if (!destination.exists()) { destination.getParentFile().mkdirs(); destination.createNewFile(); } FileIOUtils.copyFile(this.getWebXml(), destination); for (int i = 0; i < this.getCompileTarget().length; i++) { File moduleFile = null; for (Iterator it = this.getProject().getCompileSourceRoots().iterator(); it.hasNext() && moduleFile == null; ) { File check = new File(it.next().toString() + "/" + this.getCompileTarget()[i].replace('.', '/') + ".gwt.xml"); getLog().debug("Looking for file: " + check.getAbsolutePath()); if (check.exists()) { moduleFile = check; } } for (Iterator it = this.getProject().getResources().iterator(); it.hasNext(); ) { Resource r = (Resource) it.next(); File check = new File(r.getDirectory() + "/" + this.getCompileTarget()[i].replace('.', '/') + ".gwt.xml"); getLog().debug("Looking for file: " + check.getAbsolutePath()); if (check.exists()) { moduleFile = check; } } ClassLoader loader = this.fixThreadClasspath(); if (moduleFile == null) { try { String classpath = "/" + this.getCompileTarget()[i].replace('.', '/') + ".gwt.xml"; InputStream is = loader.getResourceAsStream(classpath); System.out.println("Looking for classpath: " + classpath + "(" + (is != null) + ")"); if (is != null) { File temp = new File(this.getBuildDir(), this.getCompileTarget()[i].concat(".gwt.xml")); FileOutputStream fos = new FileOutputStream(temp); FileIOUtils.copyStream(is, fos); moduleFile = temp; } } catch (IOException e) { this.getLog().info(e); } } GwtWebInfProcessor processor = null; try { if (moduleFile != null) { getLog().info("Module file: " + moduleFile.getAbsolutePath()); processor = new GwtWebInfProcessor(this.getCompileTarget()[i], moduleFile, destination.getAbsolutePath(), destination.getAbsolutePath(), this.isWebXmlServletPathAsIs()); processor.process(); } else { throw new MojoExecutionException("module file null"); } } catch (ExitException e) { this.getLog().info(e.getMessage()); } } } catch (Exception e) { throw new MojoExecutionException("Unable to merge web.xml", e); } }
11
Code Sample 1: public static String md5(String text) { MessageDigest msgDigest = null; try { msgDigest = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException e) { throw new IllegalStateException("System doesn't support MD5 algorithm."); } try { msgDigest.update(text.getBytes("utf-8")); } catch (UnsupportedEncodingException e) { throw new IllegalStateException("System doesn't support your EncodingException."); } byte[] bytes = msgDigest.digest(); String md5Str = new String(encodeHex(bytes)); return md5Str; } Code Sample 2: private void getRandomGUID(boolean secure) { MessageDigest md5 = null; StringBuffer sbValueBeforeMD5 = new StringBuffer(); try { md5 = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException e) { } try { long time = System.currentTimeMillis(); long rand = 0; if (secure) { rand = mySecureRand.nextLong(); } else { rand = random.nextLong(); } sbValueBeforeMD5.append(sid); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(time)); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(rand)); valueBeforeMD5 = sbValueBeforeMD5.toString(); md5.update(valueBeforeMD5.getBytes()); byte[] array = md5.digest(); StringBuffer sb = new StringBuffer(); for (int j = 0; j < array.length; ++j) { int b = array[j] & 0xFF; if (b < 0x10) sb.append('0'); sb.append(Integer.toHexString(b)); } valueAfterMD5 = sb.toString(); } catch (Exception e) { } }
00
Code Sample 1: private void initialize() { StringBuffer license = new StringBuffer(); URL url; InputStreamReader in; BufferedReader reader; String str; JTextArea textArea; JButton button; GridBagConstraints c; setTitle("Mibble License"); setSize(600, 600); setDefaultCloseOperation(DISPOSE_ON_CLOSE); getContentPane().setLayout(new GridBagLayout()); url = getClass().getClassLoader().getResource("LICENSE.txt"); if (url == null) { license.append("Couldn't locate license file (LICENSE.txt)."); } else { try { in = new InputStreamReader(url.openStream()); reader = new BufferedReader(in); while ((str = reader.readLine()) != null) { if (!str.equals(" ")) { license.append(str); } license.append("\n"); } reader.close(); } catch (IOException e) { license.append("Error reading license file "); license.append("(LICENSE.txt):\n\n"); license.append(e.getMessage()); } } textArea = new JTextArea(license.toString()); textArea.setEditable(false); c = new GridBagConstraints(); c.fill = GridBagConstraints.BOTH; c.weightx = 1.0d; c.weighty = 1.0d; c.insets = new Insets(4, 5, 4, 5); getContentPane().add(new JScrollPane(textArea), c); button = new JButton("Close"); button.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent e) { dispose(); } }); c = new GridBagConstraints(); c.gridy = 1; c.anchor = GridBagConstraints.CENTER; c.insets = new Insets(10, 10, 10, 10); getContentPane().add(button, c); } Code Sample 2: public void transform(File inputMatrixFile, MatrixIO.Format inputFormat, File outputMatrixFile) throws IOException { FileChannel original = new FileInputStream(inputMatrixFile).getChannel(); FileChannel copy = new FileOutputStream(outputMatrixFile).getChannel(); copy.transferFrom(original, 0, original.size()); original.close(); copy.close(); }
11
Code Sample 1: private void fileMaker() { try { long allData = 0; double a = 10; int range = 0; int blockLength = 0; File newFile = new File(mfr.getFilename() + ".part"); if (newFile.exists()) { newFile.delete(); } ArrayList<DataRange> rangeList = null; byte[] data = null; newFile.createNewFile(); ByteBuffer buffer = ByteBuffer.allocate(mfr.getBlocksize()); FileChannel rChannel = new FileInputStream(inputFileName).getChannel(); FileChannel wChannel = new FileOutputStream(newFile, true).getChannel(); System.out.println(); System.out.print("File completion: "); System.out.print("|----------|"); openConnection(); http.getResponseHeader(); for (int i = 0; i < fileMap.length; i++) { fileOffset = fileMap[i]; if (fileOffset != -1) { rChannel.read(buffer, fileOffset); buffer.flip(); wChannel.write(buffer); buffer.clear(); } else { if (!rangeQueue) { rangeList = rangeLookUp(i); range = rangeList.size(); openConnection(); http.setRangesRequest(rangeList); http.sendRequest(); http.getResponseHeader(); data = http.getResponseBody(mfr.getBlocksize()); allData += http.getAllTransferedDataLength(); } if ((i * mfr.getBlocksize() + mfr.getBlocksize()) < mfr.getLength()) { blockLength = mfr.getBlocksize(); } else { blockLength = (int) ((int) (mfr.getBlocksize()) + (mfr.getLength() - (i * mfr.getBlocksize() + mfr.getBlocksize()))); } buffer.put(data, (range - rangeList.size()) * mfr.getBlocksize(), blockLength); buffer.flip(); wChannel.write(buffer); buffer.clear(); rangeList.remove(0); if (rangeList.isEmpty()) { rangeQueue = false; } } if ((((double) i / ((double) fileMap.length - 1)) * 100) >= a) { progressBar(((double) i / ((double) fileMap.length - 1)) * 100); a += 10; } } newFile.setLastModified(getMTime()); sha = new SHA1(newFile); if (sha.SHA1sum().equals(mfr.getSha1())) { System.out.println("\nverifying download...checksum matches OK"); System.out.println("used " + (mfr.getLength() - (mfr.getBlocksize() * missing)) + " " + "local, fetched " + (mfr.getBlocksize() * missing)); new File(mfr.getFilename()).renameTo(new File(mfr.getFilename() + ".zs-old")); newFile.renameTo(new File(mfr.getFilename())); allData += mfr.getLengthOfMetafile(); System.out.println("really downloaded " + allData); double overhead = ((double) (allData - (mfr.getBlocksize() * missing)) / ((double) (mfr.getBlocksize() * missing))) * 100; System.out.println("overhead: " + df.format(overhead) + "%"); } else { System.out.println("\nverifying download...checksum don't match"); System.out.println("Deleting temporary file"); newFile.delete(); System.exit(1); } } catch (IOException ex) { System.out.println("Can't read or write, check your permissions."); System.exit(1); } } Code Sample 2: private void unzipEntry(ZipFile zipfile, ZipEntry entry, File outputDir, BackUpInfoFileGroup fileGroup, LinkedList<String> restoreList) { LinkedList<BackUpInfoFile> fileList = fileGroup.getFileList(); if (entry.isDirectory()) { createDir(new File(outputDir, entry.getName())); return; } for (int i = 0; i < fileList.size(); i++) { if (fileList.get(i).getId().equals(entry.getName())) { for (int j = 0; j < restoreList.size(); j++) { if ((fileList.get(i).getName() + "." + fileList.get(i).getType()).equals(restoreList.get(j))) { counter += 1; File outputFile = new File(outputDir, fileList.get(i).getName() + "." + fileList.get(i).getType()); if (!outputFile.getParentFile().exists()) { createDir(outputFile.getParentFile()); } BufferedInputStream inputStream; BufferedOutputStream outputStream; try { inputStream = new BufferedInputStream(zipfile.getInputStream(entry)); outputStream = new BufferedOutputStream(new FileOutputStream(outputFile)); IOUtils.copy(inputStream, outputStream); outputStream.close(); inputStream.close(); } catch (IOException ex) { throw new BackupException(ex.getMessage()); } } } } } }
00
Code Sample 1: public static void copyFile(File source, File dest) throws IOException { FileChannel in = null, out = null; try { in = new FileInputStream(source).getChannel(); out = new FileOutputStream(dest).getChannel(); long size = in.size(); MappedByteBuffer buf = in.map(FileChannel.MapMode.READ_ONLY, 0, size); out.write(buf); } finally { if (in != null) in.close(); if (out != null) out.close(); } } Code Sample 2: private void initBanner() { for (int k = 0; k < 3; k++) { if (bannerImg == null) { int i = getRandomId(); imageURL = NbBundle.getMessage(BottomContent.class, "URL_BannerImageLink", Integer.toString(i)); bannerURL = NbBundle.getMessage(BottomContent.class, "URL_BannerLink", Integer.toString(i)); HttpContext context = new BasicHttpContext(); context.setAttribute(ClientContext.COOKIE_STORE, cookieStore); HttpGet method = new HttpGet(imageURL); try { HttpResponse response = ProxyManager.httpClient.execute(method, context); HttpEntity entity = response.getEntity(); if (entity != null) { bannerImg = new ImageIcon(ImageIO.read(entity.getContent())); EntityUtils.consume(entity); } } catch (IOException ex) { bannerImg = null; } finally { method.abort(); } } else { break; } } if (bannerImg == null) { NotifyUtil.error("Banner Error", "Application could not get banner image. Please check your internet connection.", false); } }
00
Code Sample 1: private PrecomputedAnimatedModel loadPrecomputedModel_(URL url) { if (precompCache.containsKey(url.toExternalForm())) { return (precompCache.get(url.toExternalForm()).copy()); } TextureLoader.getInstance().getTexture(""); List<SharedGroup> frames = new ArrayList<SharedGroup>(); Map<String, Animation> animations = new Hashtable<String, Animation>(); if (url.toExternalForm().endsWith(".amo")) { try { BufferedReader reader = new BufferedReader(new InputStreamReader(url.openStream())); String objFileName = reader.readLine(); objFileName = url.toExternalForm().substring(0, url.toExternalForm().lastIndexOf("/")) + "/" + objFileName; frames = loadOBJFrames(objFileName); String line; while ((line = reader.readLine()) != null) { StringTokenizer tokenizer = new StringTokenizer(line); String animName = tokenizer.nextToken(); int from = Integer.valueOf(tokenizer.nextToken()); int to = Integer.valueOf(tokenizer.nextToken()); tokenizer.nextToken(); animations.put(animName, new Animation(animName, from, to)); } } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } } else { frames = loadOBJFrames(url.toExternalForm()); } PrecomputedAnimatedModel precompModel = new PrecomputedAnimatedModel(frames, animations); precompCache.put(url.toExternalForm(), precompModel); return (precompModel); } Code Sample 2: public byte[] computeMD5(String plainText) throws VHException { MessageDigest md = null; try { md = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException ex) { throw new VHException("The MD5 hash algorithm is not available.", ex); } try { md.update(plainText.getBytes("UTF-8")); } catch (UnsupportedEncodingException ex) { throw new VHException("The UTF-8 encoding is not supported.", ex); } return md.digest(); }
11
Code Sample 1: public String uploadZtree(ArrayList c) { try { String id = generateRandomId(); Iterator iter = c.iterator(); URL url = new URL(ZorobotSystem.props.getProperty("zoro.url") + "auplo1.jsp"); URLConnection connection = url.openConnection(); connection.setDoOutput(true); PrintWriter out = new PrintWriter(connection.getOutputStream()); out.print("id=" + id + "&"); StringBuffer sb = new StringBuffer(); int gg = 0; while (iter.hasNext()) { if (gg++ >= 500) break; String st = (String) iter.next(); sb.append("a="); sb.append(URLEncoder.encode(st, "UTF-8")); if (iter.hasNext() && gg < 500) sb.append("&"); } out.println(sb.toString()); out.close(); BufferedReader in = new BufferedReader(new InputStreamReader(connection.getInputStream())); String inputLine; if ((inputLine = in.readLine()) != null) { if (!inputLine.equals("OK!") && inputLine.length() > 3) { System.out.println("Not OK: " + inputLine); return "xxxxxxxxxx"; } } in.close(); return id; } catch (Exception e) { e.printStackTrace(); } return null; } Code Sample 2: public Constructor run() throws Exception { String path = "META-INF/services/" + BeanletApplicationContext.class.getName(); ClassLoader loader = Thread.currentThread().getContextClassLoader(); final Enumeration<URL> urls; if (loader == null) { urls = BeanletApplicationContext.class.getClassLoader().getResources(path); } else { urls = loader.getResources(path); } while (urls.hasMoreElements()) { URL url = urls.nextElement(); BufferedReader reader = new BufferedReader(new InputStreamReader(url.openStream())); try { String className = null; while ((className = reader.readLine()) != null) { final String name = className.trim(); if (!name.startsWith("#") && !name.startsWith(";") && !name.startsWith("//")) { final Class<?> cls; if (loader == null) { cls = Class.forName(name); } else { cls = Class.forName(name, true, loader); } int m = cls.getModifiers(); if (BeanletApplicationContext.class.isAssignableFrom(cls) && !Modifier.isAbstract(m) && !Modifier.isInterface(m)) { Constructor constructor = cls.getDeclaredConstructor(); if (!Modifier.isPublic(constructor.getModifiers())) { constructor.setAccessible(true); } return constructor; } else { throw new ClassCastException(cls.getName()); } } } } finally { reader.close(); } } throw new BeanletApplicationException("No " + "BeanletApplicationContext implementation " + "found."); }
11
Code Sample 1: public static void transfer(FileInputStream fileInStream, FileOutputStream fileOutStream) throws IOException { FileChannel fileInChannel = fileInStream.getChannel(); FileChannel fileOutChannel = fileOutStream.getChannel(); long fileInSize = fileInChannel.size(); try { long transferred = fileInChannel.transferTo(0, fileInSize, fileOutChannel); if (transferred != fileInSize) { throw new IOException("transfer() did not complete"); } } finally { ensureClose(fileInChannel, fileOutChannel); } } Code Sample 2: public static void copyFile(String sIn, String sOut) throws IOException { File fIn = new File(sIn); File fOut = new File(sOut); FileChannel fcIn = new FileInputStream(fIn).getChannel(); FileChannel fcOut = new FileOutputStream(fOut).getChannel(); try { fcIn.transferTo(0, fcIn.size(), fcOut); } catch (IOException e) { throw e; } finally { if (fcIn != null) fcIn.close(); if (fcOut != null) fcOut.close(); } fOut.setReadable(fIn.canRead()); fOut.setWritable(fIn.canWrite()); fOut.setExecutable(fIn.canExecute()); }
00
Code Sample 1: public static float medianElement(float[] array, int size) { float[] tmpArray = new float[size]; System.arraycopy(array, 0, tmpArray, 0, size); boolean changed = true; while (changed) { changed = false; for (int i = 0; i < size - 1; i++) { if (tmpArray[i] > tmpArray[i + 1]) { changed = true; float tmp = tmpArray[i]; tmpArray[i] = tmpArray[i + 1]; tmpArray[i + 1] = tmp; } } } return tmpArray[size / 2]; } Code Sample 2: private void copy(File src, File dest, String name) { File srcFile = new File(src, name); File destFile = new File(dest, name); if (destFile.exists()) { if (destFile.lastModified() == srcFile.lastModified()) return; destFile.delete(); } FileChannel in = null; FileChannel out = null; try { in = new FileInputStream(srcFile).getChannel(); out = new FileOutputStream(destFile).getChannel(); in.transferTo(0, in.size(), out); } catch (IOException e) { e.printStackTrace(); } finally { try { if (in != null) in.close(); } catch (IOException e) { } try { if (out != null) out.close(); } catch (IOException e) { } } destFile.setLastModified(srcFile.lastModified()); }
11
Code Sample 1: public File takeFile(File f, String prefix, String suffix) throws IOException { File nf = createNewFile(prefix, suffix); FileInputStream fis = new FileInputStream(f); FileChannel fic = fis.getChannel(); FileOutputStream fos = new FileOutputStream(nf); FileChannel foc = fos.getChannel(); foc.transferFrom(fic, 0, fic.size()); foc.close(); fic.close(); f.delete(); return nf; } Code Sample 2: public void insertStringInFile(String file, String textToInsert, long fromByte, long toByte) throws Exception { String tmpFile = file + ".tmp"; BufferedInputStream in = null; BufferedOutputStream out = null; long byteCount = 0; try { in = new BufferedInputStream(new FileInputStream(new File(file))); out = new BufferedOutputStream(new FileOutputStream(tmpFile)); long size = fromByte; byte[] buf = null; if (size == 0) { } else { buf = new byte[(int) size]; int length = -1; if ((length = in.read(buf)) != -1) { out.write(buf, 0, length); byteCount = byteCount + length; } else { String msg = "Failed to read the first '" + size + "' bytes of file '" + file + "'. This might be a programming error."; logger.warning(msg); throw new Exception(msg); } } buf = textToInsert.getBytes(); int length = buf.length; out.write(buf, 0, length); byteCount = byteCount + length; long skipLength = toByte - fromByte; long skippedBytes = in.skip(skipLength); if (skippedBytes == -1) { } else { buf = new byte[4096]; length = -1; while ((length = in.read(buf)) != -1) { out.write(buf, 0, length); byteCount = byteCount + length; } } in.close(); in = null; out.close(); out = null; File fileToDelete = new File(file); boolean wasDeleted = fileToDelete.delete(); if (!wasDeleted) { String msg = "Failed to delete the original file '" + file + "' to replace it with the modified file after text insertion."; logger.warning(msg); throw new Exception(msg); } File fileToRename = new File(tmpFile); boolean wasRenamed = fileToRename.renameTo(fileToDelete); if (!wasRenamed) { String msg = "Failed to rename tmp file '" + tmpFile + "' to the name of the original file '" + file + "'"; logger.warning(msg); throw new Exception(msg); } } catch (Exception e) { logger.log(Level.WARNING, "Failed to read/write file '" + file + "'.", e); throw e; } finally { if (in != null) { try { in.close(); } catch (IOException e) { logger.log(Level.FINEST, "Ignoring error closing input file '" + file + "'.", e); } } if (out != null) { try { out.close(); } catch (IOException e) { logger.log(Level.FINEST, "Ignoring error closing output file '" + tmpFile + "'.", e); } } } }
00
Code Sample 1: static String fetchURLComposeExternPackageList(String urlpath, String pkglisturlpath) { String link = pkglisturlpath + "package-list"; try { boolean relative = isRelativePath(urlpath); readPackageList((new URL(link)).openStream(), urlpath, relative); } catch (MalformedURLException exc) { return getText("doclet.MalformedURL", link); } catch (IOException exc) { return getText("doclet.URL_error", link); } return null; } Code Sample 2: @Override public KeySelectorResult select(KeyInfo keyInfo, Purpose purpose, AlgorithmMethod method, XMLCryptoContext context) throws KeySelectorException { try { return super.select(keyInfo, purpose, method, context); } catch (KeySelectorException e) { LOG.debug("no key found via ds:KeyInfo key selector"); } LOG.debug("signature resource name: " + this.signatureResourceName); String signatureSegment = this.signatureResourceName.substring(0, this.signatureResourceName.lastIndexOf("/")); LOG.debug("signature segment: " + signatureSegment); String signatureBase = this.signatureResourceName.substring(this.signatureResourceName.lastIndexOf("/") + 1); LOG.debug("signature base: " + signatureBase); String signatureRelationshipResourceName = signatureSegment + "/_rels/" + signatureBase + ".rels"; LOG.debug("signature relationship resource name: " + signatureRelationshipResourceName); ZipArchiveInputStream zipInputStream; try { zipInputStream = new ZipArchiveInputStream(this.opcUrl.openStream(), "UTF8", true, true); } catch (IOException e) { throw new KeySelectorException(e); } ZipArchiveEntry zipEntry; try { while (null != (zipEntry = zipInputStream.getNextZipEntry())) { if (signatureRelationshipResourceName.equals(zipEntry.getName())) { break; } } } catch (IOException e) { throw new KeySelectorException(e); } if (null == zipEntry) { LOG.warn("relationship part not present: " + signatureRelationshipResourceName); throw new KeySelectorException("no key found"); } LOG.debug("signature relationship part found"); JAXBElement<CTRelationships> signatureRelationshipsElement; try { signatureRelationshipsElement = (JAXBElement<CTRelationships>) this.relationshipsUnmarshaller.unmarshal(zipInputStream); } catch (JAXBException e) { throw new KeySelectorException(e); } CTRelationships signatureRelationships = signatureRelationshipsElement.getValue(); List<CTRelationship> signatureRelationshipList = signatureRelationships.getRelationship(); List<String> certificateResourceNames = new LinkedList<String>(); for (CTRelationship signatureRelationship : signatureRelationshipList) { if (DIGITAL_SIGNATURE_CERTIFICATE_REL_TYPE.equals(signatureRelationship.getType())) { String certificateResourceName = signatureRelationship.getTarget().substring(1); certificateResourceNames.add(certificateResourceName); } } X509Certificate endEntityCertificate = null; for (String certificateResourceName : certificateResourceNames) { try { zipInputStream = new ZipArchiveInputStream(this.opcUrl.openStream(), "UTF8", true, true); } catch (IOException e) { throw new KeySelectorException(e); } try { while (null != (zipEntry = zipInputStream.getNextZipEntry())) { if (certificateResourceName.equals(zipEntry.getName())) { break; } } } catch (IOException e) { throw new KeySelectorException(e); } if (null == zipEntry) { LOG.warn("certificate part not present: " + certificateResourceName); continue; } X509Certificate certificate; try { certificate = (X509Certificate) this.certificateFactory.generateCertificate(zipInputStream); } catch (CertificateException e) { throw new KeySelectorException(e); } LOG.debug("certificate subject: " + certificate.getSubjectX500Principal()); if (-1 != certificate.getBasicConstraints()) { LOG.debug("skipping CA certificate"); continue; } if (null != endEntityCertificate) { throw new KeySelectorException("two possible end entity certificates"); } endEntityCertificate = certificate; } if (null == endEntityCertificate) { throw new KeySelectorException("no key found"); } this.certificate = endEntityCertificate; return this; }
11
Code Sample 1: public static boolean decodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.DECODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { closeQuietly(in); closeQuietly(out); } return success; } Code Sample 2: private void addAuditDatastream() throws ObjectIntegrityException, StreamIOException { if (m_obj.getAuditRecords().size() == 0) { return; } String dsId = m_pid.toURI() + "/AUDIT"; String dsvId = dsId + "/" + DateUtility.convertDateToString(m_obj.getCreateDate()); Entry dsEntry = m_feed.addEntry(); dsEntry.setId(dsId); dsEntry.setTitle("AUDIT"); dsEntry.setUpdated(m_obj.getCreateDate()); dsEntry.addCategory(MODEL.STATE.uri, "A", null); dsEntry.addCategory(MODEL.CONTROL_GROUP.uri, "X", null); dsEntry.addCategory(MODEL.VERSIONABLE.uri, "false", null); dsEntry.addLink(dsvId, Link.REL_ALTERNATE); Entry dsvEntry = m_feed.addEntry(); dsvEntry.setId(dsvId); dsvEntry.setTitle("AUDIT.0"); dsvEntry.setUpdated(m_obj.getCreateDate()); ThreadHelper.addInReplyTo(dsvEntry, m_pid.toURI() + "/AUDIT"); dsvEntry.addCategory(MODEL.FORMAT_URI.uri, AUDIT1_0.uri, null); dsvEntry.addCategory(MODEL.LABEL.uri, "Audit Trail for this object", null); if (m_format.equals(ATOM_ZIP1_1)) { String name = "AUDIT.0.xml"; try { m_zout.putNextEntry(new ZipEntry(name)); Reader r = new StringReader(DOTranslationUtility.getAuditTrail(m_obj)); IOUtils.copy(r, m_zout, m_encoding); m_zout.closeEntry(); r.close(); } catch (IOException e) { throw new StreamIOException(e.getMessage(), e); } IRI iri = new IRI(name); dsvEntry.setSummary("AUDIT.0"); dsvEntry.setContent(iri, "text/xml"); } else { dsvEntry.setContent(DOTranslationUtility.getAuditTrail(m_obj), "text/xml"); } }
00
Code Sample 1: public void retrieveFiles() throws DataSyncException { try { ftp.connect(hostname, port); boolean success = ftp.login(username, password); log.info("FTP Login:" + success); if (success) { System.out.println(directory); ftp.changeWorkingDirectory(directory); ftp.setFileType(FTP.ASCII_FILE_TYPE); ftp.enterLocalPassiveMode(); ftp.setRemoteVerificationEnabled(false); FTPFile[] files = ftp.listFiles(); for (FTPFile file : files) { ftp.setFileType(file.getType()); log.debug(file.getName() + "," + file.getSize()); FileOutputStream output = new FileOutputStream(localDirectory + file.getName()); try { ftp.retrieveFile(file.getName(), output); } finally { IOUtils.closeQuietly(output); } } } } catch (Exception e) { throw new DataSyncException(e); } finally { try { ftp.disconnect(); } catch (IOException e) { } } } Code Sample 2: public String md5(String string) throws GeneralSecurityException { MessageDigest algorithm = MessageDigest.getInstance("MD5"); algorithm.reset(); algorithm.update(string.getBytes()); byte messageDigest[] = algorithm.digest(); StringBuffer hexString = new StringBuffer(); for (int i = 0; i < messageDigest.length; i++) { hexString.append(Integer.toHexString(0xFF & messageDigest[i])); } return hexString.toString(); }
11
Code Sample 1: public static void copyFile(File in, File out) throws IOException { FileChannel inChannel = new FileInputStream(in).getChannel(); FileChannel outChannel = new FileOutputStream(out).getChannel(); try { inChannel.transferTo(0, inChannel.size(), outChannel); } catch (IOException e) { throw e; } finally { if (inChannel != null) inChannel.close(); if (outChannel != null) outChannel.close(); } } Code Sample 2: public static void copyFile(File from, File to) throws Exception { if (!from.exists()) return; FileInputStream in = new FileInputStream(from); FileOutputStream out = new FileOutputStream(to); byte[] buffer = new byte[BUFFER_SIZE]; int bytes_read; while (true) { bytes_read = in.read(buffer); if (bytes_read == -1) break; out.write(buffer, 0, bytes_read); } out.flush(); out.close(); in.close(); }
00
Code Sample 1: public SearchHandler(String criteria, int langId) { try { URL url = new URL("http://eiffel.itba.edu.ar/hci/service/Catalog.groovy?method=GetProductListByName&criteria=" + criteria + "&language_id=" + langId); URLConnection urlc = url.openConnection(); urlc.setDoOutput(false); urlc.setAllowUserInteraction(false); BufferedReader br = new BufferedReader(new InputStreamReader(urlc.getInputStream())); String str; StringBuffer sb = new StringBuffer(); while ((str = br.readLine()) != null) { sb.append(str); sb.append("\n"); } br.close(); String response = sb.toString(); if (response == null) { return; } DocumentBuilderFactory dbf = DocumentBuilderFactory.newInstance(); DocumentBuilder db = dbf.newDocumentBuilder(); InputSource is = new InputSource(); is.setCharacterStream(new StringReader(response)); Document dom = db.parse(is); NodeList nl = dom.getElementsByTagName("product"); for (int i = 0; i < nl.getLength(); i++) { Element nodes = (Element) nl.item(i); String id = nodes.getAttribute("id").toString(); NodeList name = nodes.getElementsByTagName("name"); NodeList rank2 = nodes.getElementsByTagName("sales_rank"); NodeList price = nodes.getElementsByTagName("price"); NodeList url2 = nodes.getElementsByTagName("image_url"); String nameS = getCharacterDataFromElement((Element) name.item(0)); String rank2S = getCharacterDataFromElement((Element) rank2.item(0)); String priceS = getCharacterDataFromElement((Element) price.item(0)); String url2S = getCharacterDataFromElement((Element) url2.item(0)); list.add(new ProductShort(id, nameS, rank2S, priceS, url2S)); } } catch (Exception e) { e.printStackTrace(); } } Code Sample 2: void loadPlaylist() { if (running_as_applet) { String s = null; for (int i = 0; i < 10; i++) { s = getParameter("jorbis.player.play." + i); if (s == null) break; playlist.addElement(s); } } if (playlistfile == null) { return; } try { InputStream is = null; try { URL url = null; if (running_as_applet) url = new URL(getCodeBase(), playlistfile); else url = new URL(playlistfile); URLConnection urlc = url.openConnection(); is = urlc.getInputStream(); } catch (Exception ee) { } if (is == null && !running_as_applet) { try { is = new FileInputStream(System.getProperty("user.dir") + System.getProperty("file.separator") + playlistfile); } catch (Exception ee) { } } if (is == null) return; while (true) { String line = readline(is); if (line == null) break; byte[] foo = line.getBytes(); for (int i = 0; i < foo.length; i++) { if (foo[i] == 0x0d) { line = new String(foo, 0, i); break; } } playlist.addElement(line); } } catch (Exception e) { System.out.println(e); } }
00
Code Sample 1: public byte[] download(URL url, OutputStream out) throws IOException { boolean returnByByteArray = (out == null); ByteArrayOutputStream helper = null; if (returnByByteArray) { helper = new ByteArrayOutputStream(); } String s = url.toExternalForm(); URLConnection conn = url.openConnection(); String name = Launcher.getFileName(s); InputStream in = conn.getInputStream(); total = url.openConnection().getContentLength(); setStatusText(String.format("Downloading %s (%.2fMB)...", name, ((float) total / 1024 / 1024))); long justNow = System.currentTimeMillis(); int numRead = -1; byte[] buffer = new byte[2048]; while ((numRead = in.read(buffer)) != -1) { size += numRead; if (returnByByteArray) { helper.write(buffer, 0, numRead); } else { out.write(buffer, 0, numRead); } long now = System.currentTimeMillis(); if ((now - justNow) > 250) { setProgress((int) (((float) size / (float) total) * 100)); justNow = now; } } hideProgress(); if (returnByByteArray) { return helper.toByteArray(); } else { return null; } } Code Sample 2: @Test public void testTrainingQuickprop() throws IOException { File temp = File.createTempFile("fannj_", ".tmp"); temp.deleteOnExit(); IOUtils.copy(this.getClass().getResourceAsStream("xor.data"), new FileOutputStream(temp)); List<Layer> layers = new ArrayList<Layer>(); layers.add(Layer.create(2)); layers.add(Layer.create(3, ActivationFunction.FANN_SIGMOID_SYMMETRIC)); layers.add(Layer.create(1, ActivationFunction.FANN_SIGMOID_SYMMETRIC)); Fann fann = new Fann(layers); Trainer trainer = new Trainer(fann); trainer.setTrainingAlgorithm(TrainingAlgorithm.FANN_TRAIN_QUICKPROP); float desiredError = .001f; float mse = trainer.train(temp.getPath(), 500000, 1000, desiredError); assertTrue("" + mse, mse <= desiredError); }
11
Code Sample 1: public static void main(String[] args) { try { FileReader reader = new FileReader(args[0]); FileWriter writer = new FileWriter(args[1]); html2xhtml(reader, writer); writer.close(); reader.close(); } catch (Exception e) { freemind.main.Resources.getInstance().logException(e); } } Code Sample 2: void copyFile(File src, File dst) throws IOException { InputStream in = new FileInputStream(src); OutputStream out = new FileOutputStream(dst); byte[] buf = new byte[1024]; int len; while ((len = in.read(buf)) > 0) out.write(buf, 0, len); in.close(); out.close(); }
00
Code Sample 1: private void saveAttachment(long messageId, Part attachment, boolean saveAsNew) throws IOException, MessagingException { long attachmentId = -1; Uri contentUri = null; int size = -1; File tempAttachmentFile = null; if ((!saveAsNew) && (attachment instanceof LocalAttachmentBodyPart)) { attachmentId = ((LocalAttachmentBodyPart) attachment).getAttachmentId(); } if (attachment.getBody() != null) { Body body = attachment.getBody(); if (body instanceof LocalAttachmentBody) { contentUri = ((LocalAttachmentBody) body).getContentUri(); } else { InputStream in = attachment.getBody().getInputStream(); tempAttachmentFile = File.createTempFile("att", null, mAttachmentsDir); FileOutputStream out = new FileOutputStream(tempAttachmentFile); size = IOUtils.copy(in, out); in.close(); out.close(); } } if (size == -1) { String disposition = attachment.getDisposition(); if (disposition != null) { String s = MimeUtility.getHeaderParameter(disposition, "size"); if (s != null) { size = Integer.parseInt(s); } } } if (size == -1) { size = 0; } String storeData = Utility.combine(attachment.getHeader(MimeHeader.HEADER_ANDROID_ATTACHMENT_STORE_DATA), ','); String name = MimeUtility.getHeaderParameter(attachment.getContentType(), "name"); String contentId = attachment.getContentId(); if (attachmentId == -1) { ContentValues cv = new ContentValues(); cv.put("message_id", messageId); cv.put("content_uri", contentUri != null ? contentUri.toString() : null); cv.put("store_data", storeData); cv.put("size", size); cv.put("name", name); cv.put("mime_type", attachment.getMimeType()); cv.put("content_id", contentId); attachmentId = mDb.insert("attachments", "message_id", cv); } else { ContentValues cv = new ContentValues(); cv.put("content_uri", contentUri != null ? contentUri.toString() : null); cv.put("size", size); cv.put("content_id", contentId); cv.put("message_id", messageId); mDb.update("attachments", cv, "id = ?", new String[] { Long.toString(attachmentId) }); } if (tempAttachmentFile != null) { File attachmentFile = new File(mAttachmentsDir, Long.toString(attachmentId)); tempAttachmentFile.renameTo(attachmentFile); attachment.setBody(new LocalAttachmentBody(contentUri, mContext)); ContentValues cv = new ContentValues(); cv.put("content_uri", contentUri != null ? contentUri.toString() : null); mDb.update("attachments", cv, "id = ?", new String[] { Long.toString(attachmentId) }); } if (attachment instanceof LocalAttachmentBodyPart) { ((LocalAttachmentBodyPart) attachment).setAttachmentId(attachmentId); } } Code Sample 2: public static String calcCRC(String phrase) { StringBuffer crcCalc = new StringBuffer(); try { MessageDigest md = MessageDigest.getInstance("MD5"); md.update(phrase.getBytes()); byte[] tabDigest = md.digest(); for (int i = 0; i < tabDigest.length; i++) { String octet = "0" + Integer.toHexString(tabDigest[i]); crcCalc.append(octet.substring(octet.length() - 2)); } } catch (NoSuchAlgorithmException e) { e.printStackTrace(); } return crcCalc.toString(); }
00
Code Sample 1: public static byte[] readUrl(URL url) { BufferedInputStream in = null; try { class Part { byte[] partData; int len; } in = new BufferedInputStream(url.openStream()); LinkedList<Part> parts = new LinkedList<Part>(); int len = 1; while (len > 0) { byte[] data = new byte[1024]; len = in.read(data); if (len > 0) { Part part = new Part(); part.partData = data; part.len = len; parts.add(part); } } int length = 0; for (Part part : parts) length += part.len; byte[] result = new byte[length]; int pos = 0; for (Part part : parts) { System.arraycopy(part.partData, 0, result, pos, part.len); pos += part.len; } return result; } catch (IOException e) { return null; } finally { if (in != null) { try { in.close(); } catch (IOException e) { } } } } Code Sample 2: public static void unZip(String unZipfileName, String outputDirectory) throws IOException, FileNotFoundException { FileOutputStream fileOut; File file; ZipEntry zipEntry; ZipInputStream zipIn = new ZipInputStream(new BufferedInputStream(new FileInputStream(unZipfileName)), encoder); while ((zipEntry = zipIn.getNextEntry()) != null) { file = new File(outputDirectory + File.separator + zipEntry.getName()); if (zipEntry.isDirectory()) { createDirectory(file.getPath(), ""); } else { File parent = file.getParentFile(); if (!parent.exists()) { createDirectory(parent.getPath(), ""); } fileOut = new FileOutputStream(file); int readedBytes; while ((readedBytes = zipIn.read(buf)) > 0) { fileOut.write(buf, 0, readedBytes); } fileOut.close(); } zipIn.closeEntry(); } }
00
Code Sample 1: public IntactOntology parseOboFile(URL url, boolean keepTemporaryFile) throws PsiLoaderException { if (url == null) { throw new IllegalArgumentException("Please give a non null URL."); } StringBuffer buffer = new StringBuffer(1024 * 8); try { System.out.println("Loading URL: " + url); BufferedReader in = new BufferedReader(new InputStreamReader(url.openStream()), 1024); String line; int lineCount = 0; while ((line = in.readLine()) != null) { lineCount++; buffer.append(line).append(NEW_LINE); if ((lineCount % 20) == 0) { System.out.print("."); System.out.flush(); if ((lineCount % 500) == 0) { System.out.println(" " + lineCount); } } } in.close(); File tempDirectory = new File(System.getProperty("java.io.tmpdir", "tmp")); if (!tempDirectory.exists()) { if (!tempDirectory.mkdirs()) { throw new IOException("Cannot create temp directory: " + tempDirectory.getAbsolutePath()); } } System.out.println("Using temp directory: " + tempDirectory.getAbsolutePath()); File tempFile = File.createTempFile("psimi.v25.", ".obo", tempDirectory); tempFile.deleteOnExit(); tempFile.deleteOnExit(); System.out.println("The OBO file is temporary store as: " + tempFile.getAbsolutePath()); BufferedWriter out = new BufferedWriter(new FileWriter(tempFile), 1024); out.write(buffer.toString()); out.flush(); out.close(); return parseOboFile(tempFile); } catch (IOException e) { throw new PsiLoaderException("Error while loading URL (" + url + ")", e); } } Code Sample 2: public void copyFile(File in, File out) throws Exception { FileChannel ic = new FileInputStream(in).getChannel(); FileChannel oc = new FileOutputStream(out).getChannel(); ic.transferTo(0, ic.size(), oc); ic.close(); oc.close(); }
11
Code Sample 1: private void saveAttachment(long messageId, Part attachment, boolean saveAsNew) throws IOException, MessagingException { long attachmentId = -1; Uri contentUri = null; int size = -1; File tempAttachmentFile = null; if ((!saveAsNew) && (attachment instanceof LocalAttachmentBodyPart)) { attachmentId = ((LocalAttachmentBodyPart) attachment).getAttachmentId(); } if (attachment.getBody() != null) { Body body = attachment.getBody(); if (body instanceof LocalAttachmentBody) { contentUri = ((LocalAttachmentBody) body).getContentUri(); } else { InputStream in = attachment.getBody().getInputStream(); tempAttachmentFile = File.createTempFile("att", null, mAttachmentsDir); FileOutputStream out = new FileOutputStream(tempAttachmentFile); size = IOUtils.copy(in, out); in.close(); out.close(); } } if (size == -1) { String disposition = attachment.getDisposition(); if (disposition != null) { String s = MimeUtility.getHeaderParameter(disposition, "size"); if (s != null) { size = Integer.parseInt(s); } } } if (size == -1) { size = 0; } String storeData = Utility.combine(attachment.getHeader(MimeHeader.HEADER_ANDROID_ATTACHMENT_STORE_DATA), ','); String name = MimeUtility.getHeaderParameter(attachment.getContentType(), "name"); String contentId = attachment.getContentId(); if (attachmentId == -1) { ContentValues cv = new ContentValues(); cv.put("message_id", messageId); cv.put("content_uri", contentUri != null ? contentUri.toString() : null); cv.put("store_data", storeData); cv.put("size", size); cv.put("name", name); cv.put("mime_type", attachment.getMimeType()); cv.put("content_id", contentId); attachmentId = mDb.insert("attachments", "message_id", cv); } else { ContentValues cv = new ContentValues(); cv.put("content_uri", contentUri != null ? contentUri.toString() : null); cv.put("size", size); cv.put("content_id", contentId); cv.put("message_id", messageId); mDb.update("attachments", cv, "id = ?", new String[] { Long.toString(attachmentId) }); } if (tempAttachmentFile != null) { File attachmentFile = new File(mAttachmentsDir, Long.toString(attachmentId)); tempAttachmentFile.renameTo(attachmentFile); attachment.setBody(new LocalAttachmentBody(contentUri, mContext)); ContentValues cv = new ContentValues(); cv.put("content_uri", contentUri != null ? contentUri.toString() : null); mDb.update("attachments", cv, "id = ?", new String[] { Long.toString(attachmentId) }); } if (attachment instanceof LocalAttachmentBodyPart) { ((LocalAttachmentBodyPart) attachment).setAttachmentId(attachmentId); } } Code Sample 2: private static byte[] tryLoadFile(String path) throws IOException { InputStream in = new FileInputStream(path); ByteArrayOutputStream out = new ByteArrayOutputStream(); IOUtils.copy(in, out); in.close(); out.close(); return out.toByteArray(); }
00
Code Sample 1: @Override public MapInfo getMap(int mapId) { MapInfo info = mapCache.get(mapId); if (info != null && info.getContent() == null) { if (info.getInfo().get("fileName") == null) { if (mapId != lastRequestedMap) { lastRequestedMap = mapId; System.out.println("MapLoaderClient::getMap:requesting map from server " + mapId); serverConnection.sendMessage(new MessageFetch(FetchType.map.name(), mapId)); } } else { try { System.out.println("MapLoaderClient::getMap:loading map from file " + info.getInfo().get("fileName")); BufferedReader bufferedreader; URL fetchUrl = new URL(localMapContextUrl, info.getInfo().get("fileName")); URLConnection urlconnection = fetchUrl.openConnection(); if (urlconnection.getContentEncoding() != null) { bufferedreader = new BufferedReader(new InputStreamReader(urlconnection.getInputStream(), urlconnection.getContentEncoding())); } else { bufferedreader = new BufferedReader(new InputStreamReader(urlconnection.getInputStream(), "utf-8")); } String line; StringBuilder mapContent = new StringBuilder(); while ((line = bufferedreader.readLine()) != null) { mapContent.append(line); mapContent.append("\n"); } info.setContent(mapContent.toString()); fireMapChanged(info); } catch (IOException _ex) { System.err.println("MapLoaderClient::getMap:: Can't read from " + info.getInfo().get("fileName")); } } } return info; } Code Sample 2: public static Properties addAttributes(Node node, String[] names, Properties props, LogEvent evt) throws ConfigurationException { if (props == null) props = new Properties(); try { MessageDigest md = MessageDigest.getInstance("MD5"); for (int i = 0; i < names.length; i++) { String value = addProperty(names[i], props, node, evt); if (value != null) { md.update(names[i].getBytes()); md.update(value.getBytes()); } } byte[] digest = md.digest(); evt.addMessage("digest " + ISOUtil.hexString(digest)); props.put(DIGEST_PROPERTY, digest); } catch (NoSuchAlgorithmException e) { throw new ConfigurationException(e); } return props; }
00
Code Sample 1: private InputStream getConnection() throws BaseException { OutputStreamWriter wr = null; try { StringBuilder sb = new StringBuilder(); sb.append(getBaseString()); sb.append(AND); sb.append(encode(ACTION, ENCODING)); sb.append(EQUAL); sb.append(encode(ACTION_GET_ALL, ENCODING)); URL url = new URL(SERVER_URL); URLConnection conn = url.openConnection(); conn.setDoOutput(true); wr = new OutputStreamWriter(conn.getOutputStream()); wr.write(sb.toString()); wr.flush(); return conn.getInputStream(); } catch (Exception e) { throw getException(e, context); } finally { closeSafely(wr); } } Code Sample 2: public static InputStream getResourceAsStream(final String fileName) { if ((fileName.indexOf("file:") >= 0) || (fileName.indexOf(":/") > 0)) { try { URL url = new URL(fileName); return new BufferedInputStream(url.openStream()); } catch (Exception e) { return null; } } return new ByteArrayInputStream(getResource(fileName).getData()); }
00
Code Sample 1: private ScrollingGraphicalViewer createGraphicalViewer(final Composite parent) { final ScrollingGraphicalViewer viewer = new ScrollingGraphicalViewer(); viewer.createControl(parent); _root = new EditRootEditPart(); viewer.setRootEditPart(_root); getEditDomain().addViewer(viewer); getSite().setSelectionProvider(viewer); viewer.setEditPartFactory(getEditPartFactory()); final KeyHandler keyHandler = new GraphicalViewerKeyHandler(viewer) { @SuppressWarnings("unchecked") @Override public boolean keyPressed(final KeyEvent event) { if (event.stateMask == SWT.MOD1 && event.keyCode == SWT.DEL) { final List<? extends EditorPart> objects = viewer.getSelectedEditParts(); if (objects == null || objects.isEmpty()) return true; final GroupRequest deleteReq = new GroupRequest(RequestConstants.REQ_DELETE); final CompoundCommand compoundCmd = new CompoundCommand("Delete"); for (int i = 0; i < objects.size(); i++) { final EditPart object = (EditPart) objects.get(i); deleteReq.setEditParts(object); final Command cmd = object.getCommand(deleteReq); if (cmd != null) compoundCmd.add(cmd); } getCommandStack().execute(compoundCmd); return true; } if (event.stateMask == SWT.MOD3 && (event.keyCode == SWT.ARROW_DOWN || event.keyCode == SWT.ARROW_LEFT || event.keyCode == SWT.ARROW_RIGHT || event.keyCode == SWT.ARROW_UP)) { final List<? extends EditorPart> objects = viewer.getSelectedEditParts(); if (objects == null || objects.isEmpty()) return true; final GroupRequest moveReq = new ChangeBoundsRequest(RequestConstants.REQ_MOVE); final CompoundCommand compoundCmd = new CompoundCommand("Move"); for (int i = 0; i < objects.size(); i++) { final EditPart object = (EditPart) objects.get(i); moveReq.setEditParts(object); final LocationCommand cmd = (LocationCommand) object.getCommand(moveReq); if (cmd != null) { cmd.setLocation(new Point(event.keyCode == SWT.ARROW_LEFT ? -1 : event.keyCode == SWT.ARROW_RIGHT ? 1 : 0, event.keyCode == SWT.ARROW_DOWN ? 1 : event.keyCode == SWT.ARROW_UP ? -1 : 0)); cmd.setRelative(true); compoundCmd.add(cmd); } } getCommandStack().execute(compoundCmd); return true; } return super.keyPressed(event); } }; keyHandler.put(KeyStroke.getPressed(SWT.F2, 0), getActionRegistry().getAction(GEFActionConstants.DIRECT_EDIT)); viewer.setKeyHandler(keyHandler); viewer.setContents(getEditorInput().getAdapter(NamedUuidEntity.class)); viewer.addDropTargetListener(createTransferDropTargetListener(viewer)); return viewer; } Code Sample 2: public boolean uploadFromServlet(InputStream is, String serverFileName, String serverPath, String serverUrl, int serverPort, String userName, String passWord) throws IOException { FTPClient ftp = new FTPClient(); FTPClientConfig conf = new FTPClientConfig(); conf.setServerLanguageCode("zh_CN"); conf.setServerTimeZoneId("Asia/Chongqing"); try { ftp.configure(conf); int reply; ftp.setDefaultPort(serverPort); ftp.connect(serverUrl); reply = ftp.getReplyCode(); if (!FTPReply.isPositiveCompletion(reply)) { ftp.disconnect(); throw new IOException("FTP server refused connection."); } } catch (IOException e) { disconnectFtp(ftp); } try { if (!ftp.login(userName, passWord)) { throw new IOException("Can not log in with given username and password."); } if (!ftp.changeWorkingDirectory(serverPath)) { throw new IOException("Can not change to working directory."); } ftp.setFileType(FTP.BINARY_FILE_TYPE); if (!ftp.storeFile(serverFileName, is)) { throw new IOException("Can not store file to FTP server."); } is.close(); } catch (SocketException e) { e.printStackTrace(); return false; } catch (IOException e) { e.printStackTrace(); return false; } finally { if (ftp != null && ftp.isConnected()) { try { ftp.logout(); ftp.disconnect(); } catch (IOException e) { e.printStackTrace(); return false; } } } return true; }
11
Code Sample 1: private void processBasicContent() { String[] packageNames = sourceCollector.getPackageNames(); for (int i = 0; i < packageNames.length; i++) { XdcSource[] sources = sourceCollector.getXdcSources(packageNames[i]); File dir = new File(outputDir, packageNames[i]); dir.mkdirs(); Set pkgDirs = new HashSet(); for (int j = 0; j < sources.length; j++) { XdcSource source = sources[j]; Properties patterns = source.getPatterns(); if (patterns != null) { tables.put("patterns", patterns); } pkgDirs.add(source.getFile().getParentFile()); DialectHandler dialectHandler = source.getDialectHandler(); Writer out = null; try { String sourceFilePath = source.getFile().getAbsolutePath(); source.setProcessingProperties(baseProperties, j > 0 ? sources[j - 1].getFileName() : null, j < sources.length - 1 ? sources[j + 1].getFileName() : null); String rootComment = XslUtils.transformToString(sourceFilePath, XSL_PKG + "/source-header.xsl", tables); source.setRootComment(rootComment); Document htmlDoc = XslUtils.transform(sourceFilePath, encoding, dialectHandler.getXslResourcePath(), tables); if (LOG.isInfoEnabled()) { LOG.info("Processing source file " + sourceFilePath); } out = IOUtils.getWriter(new File(dir, source.getFile().getName() + ".html"), docencoding); XmlUtils.printHtml(out, htmlDoc); if (sourceProcessor != null) { sourceProcessor.processSource(source, encoding, docencoding); } XdcSource.clearProcessingProperties(baseProperties); } catch (XmlException e) { LOG.error(e.getMessage(), e); } catch (IOException e) { LOG.error(e.getMessage(), e); } finally { if (out != null) { try { out.close(); } catch (IOException e) { LOG.error(e.getMessage(), e); } } } } for (Iterator iter = pkgDirs.iterator(); iter.hasNext(); ) { File docFilesDir = new File((File) iter.next(), "xdc-doc-files"); if (docFilesDir.exists() && docFilesDir.isDirectory()) { File targetDir = new File(dir, "xdc-doc-files"); targetDir.mkdirs(); try { IOUtils.copyTree(docFilesDir, targetDir); } catch (IOException e) { LOG.error(e.getMessage(), e); } } } } } Code Sample 2: public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFormat.ACRNEMA_STREAM) { System.out.println("\n" + src + ": not an ACRNEMA stream!"); return; } p.parseDcmFile(format, Tags.PixelData); if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) { System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert"); return; } boolean hasPixelData = p.getReadTag() == Tags.PixelData; boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12; int pxlen = p.getReadLength(); if (hasPixelData) { if (inflate) { ds.putUS(Tags.BitsAllocated, 16); pxlen = pxlen * 4 / 3; } if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) { System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert"); return; } } ds.putUI(Tags.StudyInstanceUID, uid(studyUID)); ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID)); ds.putUI(Tags.SOPInstanceUID, uid(instUID)); ds.putUI(Tags.SOPClassUID, classUID); if (!ds.contains(Tags.NumberOfSamples)) { ds.putUS(Tags.NumberOfSamples, 1); } if (!ds.contains(Tags.PhotometricInterpretation)) { ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2"); } if (fmi) { ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian)); } OutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); try { } finally { ds.writeFile(out, encodeParam()); if (hasPixelData) { if (!skipGroupLen) { out.write(PXDATA_GROUPLEN); int grlen = pxlen + 8; out.write((byte) grlen); out.write((byte) (grlen >> 8)); out.write((byte) (grlen >> 16)); out.write((byte) (grlen >> 24)); } out.write(PXDATA_TAG); out.write((byte) pxlen); out.write((byte) (pxlen >> 8)); out.write((byte) (pxlen >> 16)); out.write((byte) (pxlen >> 24)); } if (inflate) { int b2, b3; for (; pxlen > 0; pxlen -= 3) { out.write(in.read()); b2 = in.read(); b3 = in.read(); out.write(b2 & 0x0f); out.write(b2 >> 4 | ((b3 & 0x0f) << 4)); out.write(b3 >> 4); } } else { for (; pxlen > 0; --pxlen) { out.write(in.read()); } } out.close(); } System.out.print('.'); } finally { in.close(); } }
11
Code Sample 1: public static void main(String[] args) throws Exception { MessageDigest md = MessageDigest.getInstance("MD5"); String text = "YUMyfj"; md.update(text.getBytes(), 0, text.length()); System.out.println(new BigInteger(1, md.digest()).toString(16).toString()); } Code Sample 2: public boolean WriteFile(java.io.Serializable inObj, String fileName) throws Exception { FileOutputStream out; try { SecretKey skey = null; AlgorithmParameterSpec aps; out = new FileOutputStream(fileName); cipher = Cipher.getInstance(algorithm); KeySpec kspec = new PBEKeySpec(filePasswd.toCharArray()); SecretKeyFactory skf = SecretKeyFactory.getInstance(algorithm); skey = skf.generateSecret(kspec); MessageDigest md = MessageDigest.getInstance(res.getString("MD5")); md.update(filePasswd.getBytes()); byte[] digest = md.digest(); System.arraycopy(digest, 0, salt, 0, 8); aps = new PBEParameterSpec(salt, iterations); out.write(salt); ObjectOutputStream s = new ObjectOutputStream(out); cipher.init(Cipher.ENCRYPT_MODE, skey, aps); SealedObject so = new SealedObject(inObj, cipher); s.writeObject(so); s.flush(); out.close(); } catch (Exception e) { Log.out("fileName=" + fileName); Log.out("algorithm=" + algorithm); Log.out(e); throw e; } return true; }
00
Code Sample 1: public static String getMD5Hash(String data) { MessageDigest digest; try { digest = java.security.MessageDigest.getInstance("MD5"); digest.update(data.getBytes()); byte[] hash = digest.digest(); StringBuffer hexString = new StringBuffer(); String hexChar = ""; for (int i = 0; i < hash.length; i++) { hexChar = Integer.toHexString(0xFF & hash[i]); if (hexChar.length() < 2) { hexChar = "0" + hexChar; } hexString.append(hexChar); } return hexString.toString(); } catch (NoSuchAlgorithmException ex) { return null; } } Code Sample 2: protected void zipFile(File from, File to) throws IOException { FileInputStream in = new FileInputStream(from); ZipOutputStream out = new ZipOutputStream(new FileOutputStream(to)); byte[] buffer = new byte[4096]; int bytes_read; while ((bytes_read = in.read(buffer)) != -1) out.write(buffer, 0, bytes_read); in.close(); out.close(); }
00
Code Sample 1: public void startImport(ActionEvent evt) { final PsiExchange psiExchange = PsiExchangeFactory.createPsiExchange(IntactContext.getCurrentInstance().getSpringContext()); for (final URL url : urlsToImport) { try { if (log.isInfoEnabled()) log.info("Importing: " + url); psiExchange.importIntoIntact(url.openStream()); } catch (IOException e) { handleException(e); return; } } addInfoMessage("File successfully imported", Arrays.asList(urlsToImport).toString()); } Code Sample 2: public void run() { synchronized (stateLock) { if (started) { return; } else { started = true; running = true; } } BufferedInputStream bis = null; BufferedOutputStream bos = null; BufferedReader br = null; try { checkState(); progressString = "Opening connection to remote resource"; progressUpdated = true; final URLConnection link; try { link = url.openConnection(); link.connect(); } catch (Exception e) { progressString = "Failed to open connection to remote resource"; progressUpdated = true; throw e; } checkState(); progressString = "Getting length of remote resource"; progressUpdated = true; final int length = link.getContentLength(); synchronized (lengthLock) { totalLength = length; } progressUpdated = true; checkState(); progressString = "Opening input stream to remote resource"; progressUpdated = true; try { final InputStream input = link.getInputStream(); if (target instanceof File) { bis = new BufferedInputStream(input); } else if (target instanceof StringBuilder) { final String contentType = link.getContentType().toLowerCase(Locale.ENGLISH); String charset = null; final Matcher m = Pattern.compile(".*charset[\\s]*=([^;]++).*").matcher(contentType); if (m.find()) { charset = m.group(1).trim(); } if ((charset != null) && !charset.isEmpty()) { try { br = new BufferedReader(new InputStreamReader(input, charset)); } catch (Exception e) { br = null; } } if (br == null) { br = new BufferedReader(new InputStreamReader(input)); } } } catch (Exception e) { progressString = "Failed to open input stream to remote resource"; progressUpdated = true; throw e; } if (target instanceof File) { checkState(); progressString = "Opening output stream to local file"; progressUpdated = true; try { final File f = (File) target; final File parent = f.getParentFile(); if ((parent != null) && !parent.exists()) { parent.mkdirs(); } bos = new BufferedOutputStream(new FileOutputStream(f)); } catch (Exception e) { progressString = "Failed to open output stream to local file"; progressUpdated = true; throw e; } } progressString = "Downloading"; progressUpdated = true; try { if (target instanceof File) { final byte[] byteBuffer = new byte[BUFFER_SIZE]; while (true) { checkState(); final int byteCount = bis.read(byteBuffer, 0, BUFFER_SIZE); if (byteCount == -1) { break; } bos.write(byteBuffer, 0, byteCount); synchronized (lengthLock) { downloadedLength += byteCount; } progressUpdated = true; } } else if (target instanceof StringBuilder) { final char[] charBuffer = new char[BUFFER_SIZE]; final StringBuilder sb = (StringBuilder) target; while (true) { checkState(); final int charCount = br.read(charBuffer, 0, BUFFER_SIZE); if (charCount == -1) { break; } sb.append(charBuffer, 0, charCount); synchronized (lengthLock) { downloadedLength += charCount; } progressUpdated = true; } } } catch (Exception e) { progressString = "Failed to download remote resource"; progressUpdated = true; throw e; } progressString = "Download completed"; progressUpdated = true; } catch (Exception e) { error = e; } finally { for (Closeable c : new Closeable[] { bis, br, bos }) { if (c != null) { try { c.close(); } catch (Exception e) { } } } synchronized (stateLock) { running = false; completed = true; } } }
00
Code Sample 1: public static String encryption(String oldPass) { MessageDigest md = null; try { md = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException ex) { ex.printStackTrace(); } md.update(oldPass.getBytes()); byte b[] = md.digest(); int i; StringBuffer buf = new StringBuffer(); for (int offset = 0; offset < b.length; offset++) { i = b[offset]; if (i < 0) { i += 256; } if (i < 16) { buf.append("0"); } buf.append(Integer.toHexString(i)); } String pass32 = buf.toString(); return pass32; } Code Sample 2: private Bitmap fetchImage(String urlstr) throws Exception { URL url; url = new URL(urlstr); HttpURLConnection c = (HttpURLConnection) url.openConnection(); c.setDoInput(true); c.setRequestProperty("User-Agent", "Agent"); c.connect(); InputStream is = c.getInputStream(); Bitmap img; img = BitmapFactory.decodeStream(is); return img; }
00
Code Sample 1: public boolean download(String url) { HttpGet httpGet = new HttpGet(url); String filename = FileUtils.replaceNonAlphanumericCharacters(url); String completePath = directory + File.separatorChar + filename; int retriesLeft = MAX_RETRIES; while (retriesLeft > 0) { try { HttpResponse response = httpClient.execute(httpGet); HttpEntity resEntity = response.getEntity(); if (resEntity != null) { logger.info("Downloading file from " + url + " -> " + completePath); IOUtils.copy(resEntity.getContent(), new FileOutputStream(completePath)); logger.info("File " + filename + " was downloaded successfully."); setFileSize(new File(completePath).length()); setFilename(filename); return true; } else { logger.warn("Trouble downloading file from " + url + ". Status was: " + response.getStatusLine()); } } catch (ClientProtocolException e) { logger.error("Protocol error. This is probably serious, and there's no need " + "to continue trying to download this file.", e); return false; } catch (IOException e) { logger.warn("IO trouble: " + e.getMessage() + ". Retries left: " + retriesLeft); } retriesLeft--; } return false; } Code Sample 2: private static void getFileFtp(String user, String password, String host, int port, String fileName, String location) throws Exception { Log.info("\nretrieve " + fileName + NEW_LINE); FTPClient client = new FTPClient(); client.connect(host, port); int reply = client.getReplyCode(); if (!FTPReply.isPositiveCompletion(reply)) { throw new Exception("FTP fail to connect"); } if (!client.login(user, password)) { throw new Exception("FTP fail to login"); } try { File locationFile = new File(location); File dest = new File(locationFile, fileName); if (dest.exists()) { dest.delete(); } else { locationFile.mkdirs(); } boolean status = client.changeWorkingDirectory("/"); Log.info("chdir-status:" + status + NEW_LINE); client.setFileTransferMode(FTPClient.BINARY_FILE_TYPE); client.setFileType(FTPClient.BINARY_FILE_TYPE); client.enterLocalActiveMode(); InputStream in = client.retrieveFileStream(fileName); if (in == null) { Log.error("Input stream is null\n"); throw new Exception("Fail to retrieve file " + fileName); } Thread.sleep(3000); saveInputStreamToFile(in, new File(location, fileName)); } finally { client.disconnect(); } }
00
Code Sample 1: public boolean refresh() { try { synchronized (text) { stream = (new URL(url)).openStream(); BufferedReader reader = new BufferedReader(new InputStreamReader(stream)); String line; StringBuilder sb = new StringBuilder(); while ((line = reader.readLine()) != null) { sb.append(line); sb.append("\n"); } text = sb.toString(); } price = 0; date = null; } catch (MalformedURLException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); return false; } finally { if (stream != null) try { stream.close(); } catch (IOException e) { e.printStackTrace(); } } return true; } Code Sample 2: private WikiSiteContentInfo createInfoIndexSite(Long domainId) { final UserInfo user = getSecurityService().getCurrentUser(); final Locale locale = new Locale(user.getLocale()); final String country = locale.getLanguage(); InputStream inStream = Thread.currentThread().getContextClassLoader().getResourceAsStream("wiki_index_" + country + ".xhtml"); if (inStream == null) { inStream = Thread.currentThread().getContextClassLoader().getResourceAsStream("wiki_index.xhtml"); } if (inStream == null) { inStream = new ByteArrayInputStream(DEFAULT_WIKI_INDEX_SITE_TEXT.getBytes()); } if (inStream != null) { ByteArrayOutputStream out = new ByteArrayOutputStream(); try { IOUtils.copyLarge(inStream, out); return createIndexVersion(domainId, out.toString(), user); } catch (IOException exception) { LOGGER.error("Error creating info page.", exception); } finally { try { inStream.close(); out.close(); } catch (IOException exception) { LOGGER.error("Error reading wiki_index.xhtml", exception); } } } return null; }
00
Code Sample 1: public static void nuovoAcquisto(int quantita, Date d, double price, int id) throws SQLException { MyDBConnection c = new MyDBConnection(); c.init(); Connection conn = c.getMyConnection(); PreparedStatement ps = conn.prepareStatement(insertAcquisto); ps.setInt(1, quantita); ps.setDate(2, d); ps.setDouble(3, price); ps.setInt(4, id); ps.executeUpdate(); double newPrice = price; int newQ = quantita; ResultSet rs = MyDBConnection.executeQuery(queryPrezzo.replace("?", "" + id), conn); if (rs.next()) { int oldQ = rs.getInt(1); double oldPrice = rs.getDouble(2); newQ = quantita + oldQ; newPrice = (oldPrice * oldQ + price * quantita) / newQ; updatePortafoglio(conn, newPrice, newQ, id); } else insertPortafoglio(conn, id, newPrice, newQ); try { conn.commit(); } catch (SQLException e) { conn.rollback(); throw new SQLException("Effettuato rollback dopo " + e.getMessage()); } finally { c.close(); } } Code Sample 2: public Object mapRow(ResultSet rs, int i) throws SQLException { try { BLOB blob = (BLOB) rs.getBlob(1); OutputStream outputStream = blob.setBinaryStream(0L); IOUtils.copy(inputStream, outputStream); outputStream.close(); inputStream.close(); } catch (Exception e) { throw new SQLException(e.getMessage()); } return null; }
00
Code Sample 1: private static List retrieveQuotes(Report report, Symbol symbol, String suffix, TradingDate startDate, TradingDate endDate) throws ImportExportException { List quotes = new ArrayList(); String URLString = constructURL(symbol, suffix, startDate, endDate); EODQuoteFilter filter = new YahooEODQuoteFilter(symbol); PreferencesManager.ProxyPreferences proxyPreferences = PreferencesManager.getProxySettings(); try { URL url = new URL(URLString); InputStreamReader input = new InputStreamReader(url.openStream()); BufferedReader bufferedInput = new BufferedReader(input); String line = bufferedInput.readLine(); while (line != null) { line = bufferedInput.readLine(); if (line != null) { try { EODQuote quote = filter.toEODQuote(line); quotes.add(quote); verify(report, quote); } catch (QuoteFormatException e) { report.addError(Locale.getString("YAHOO_DISPLAY_URL") + ":" + symbol + ":" + Locale.getString("ERROR") + ": " + e.getMessage()); } } } bufferedInput.close(); } catch (BindException e) { throw new ImportExportException(Locale.getString("UNABLE_TO_CONNECT_ERROR", e.getMessage())); } catch (ConnectException e) { throw new ImportExportException(Locale.getString("UNABLE_TO_CONNECT_ERROR", e.getMessage())); } catch (UnknownHostException e) { throw new ImportExportException(Locale.getString("UNKNOWN_HOST_ERROR", e.getMessage())); } catch (NoRouteToHostException e) { throw new ImportExportException(Locale.getString("DESTINATION_UNREACHABLE_ERROR", e.getMessage())); } catch (MalformedURLException e) { throw new ImportExportException(Locale.getString("INVALID_PROXY_ERROR", proxyPreferences.host, proxyPreferences.port)); } catch (FileNotFoundException e) { } catch (IOException e) { throw new ImportExportException(Locale.getString("ERROR_DOWNLOADING_QUOTES")); } return quotes; } Code Sample 2: @Test public void testMark() throws IllegalArgumentException, IOException { Assert.assertNotNull(this.m_detector); File f = new File("testdocuments/voiddocument/Voiderror.htm"); Assert.assertTrue("Test file " + f.getAbsolutePath() + " does not exist. ", f.exists()); URL url = f.toURL(); this.m_detector.detectCodepage(url.openStream(), 200); }
00
Code Sample 1: public void run() { String masterUrl = "http://localhost:" + masterJetty.getLocalPort() + "/solr/replication?command=" + ReplicationHandler.CMD_DETAILS; URL url; InputStream stream = null; try { url = new URL(masterUrl); stream = url.openStream(); response = IOUtils.toString(stream); if (response.contains("<str name=\"status\">success</str>")) { success = true; } stream.close(); } catch (Exception e) { fail = e.getMessage(); } finally { IOUtils.closeQuietly(stream); } } Code Sample 2: private static InputStream openStream(final URL url) throws IOException { try { return (InputStream) AccessController.doPrivileged(new PrivilegedExceptionAction() { public Object run() throws IOException { return url.openStream(); } }); } catch (PrivilegedActionException e) { throw (IOException) e.getException(); } }
11
Code Sample 1: protected void setUp() throws Exception { testOutputDirectory = new File(getClass().getResource("/").getPath()); zipFile = new File(this.testOutputDirectory, "/plugin.zip"); zipOutputDirectory = new File(this.testOutputDirectory, "zip"); zipOutputDirectory.mkdir(); logger.fine("zip dir created"); ZipOutputStream zos = new ZipOutputStream(new FileOutputStream(zipFile)); zos.putNextEntry(new ZipEntry("css/")); zos.putNextEntry(new ZipEntry("css/system.properties")); System.getProperties().store(zos, null); zos.closeEntry(); zos.putNextEntry(new ZipEntry("js/")); zos.putNextEntry(new ZipEntry("js/system.properties")); System.getProperties().store(zos, null); zos.closeEntry(); zos.putNextEntry(new ZipEntry("WEB-INF/")); zos.putNextEntry(new ZipEntry("WEB-INF/classes/")); zos.putNextEntry(new ZipEntry("WEB-INF/classes/system.properties")); System.getProperties().store(zos, null); zos.closeEntry(); zos.putNextEntry(new ZipEntry("WEB-INF/lib/")); zos.putNextEntry(new ZipEntry("WEB-INF/lib/mylib.jar")); File jarFile = new File(this.testOutputDirectory.getPath() + "/mylib.jar"); JarOutputStream jos = new JarOutputStream(new FileOutputStream(jarFile)); jos.putNextEntry(new ZipEntry("vqwiki/")); jos.putNextEntry(new ZipEntry("vqwiki/plugins/")); jos.putNextEntry(new ZipEntry("vqwiki/plugins/system.properties")); System.getProperties().store(jos, null); jos.closeEntry(); jos.close(); IOUtils.copy(new FileInputStream(jarFile), zos); zos.closeEntry(); zos.close(); jarFile.delete(); } Code Sample 2: public boolean backupFile(File oldFile, File newFile) { boolean isBkupFileOK = false; FileChannel sourceChannel = null; FileChannel targetChannel = null; try { sourceChannel = new FileInputStream(oldFile).getChannel(); targetChannel = new FileOutputStream(newFile).getChannel(); targetChannel.transferFrom(sourceChannel, 0, sourceChannel.size()); } catch (IOException e) { logger.log(Level.SEVERE, "IO exception occurred while copying config file", e); } finally { if ((newFile != null) && (newFile.exists()) && (newFile.length() > 0)) { isBkupFileOK = true; } try { if (sourceChannel != null) { sourceChannel.close(); } if (targetChannel != null) { targetChannel.close(); } } catch (IOException e) { logger.log(Level.INFO, "closing channels failed"); } } return isBkupFileOK; }
00
Code Sample 1: private void upgradeSchema() throws IOException { Statement stmt = null; try { int i = getSchema(); if (i < SCHEMA_VERSION) { conn.setAutoCommit(false); stmt = conn.createStatement(); while (i < SCHEMA_VERSION) { String qry; switch(i) { case 1: qry = "CREATE TABLE log (id INTEGER PRIMARY KEY, context VARCHAR(16) NOT NULL, level VARCHAR(16) NOT NULL, time LONG INT NOT NULL, msg LONG VARCHAR NOT NULL, parent INT)"; stmt.executeUpdate(qry); qry = "UPDATE settings SET val = '2' WHERE var = 'schema'"; stmt.executeUpdate(qry); break; case 2: qry = "CREATE TABLE monitor (id INTEGER PRIMARY KEY NOT NULL, status INTEGER NOT NULL)"; stmt.executeUpdate(qry); qry = "UPDATE settings SET val = '3' WHERE var = 'schema'"; stmt.executeUpdate(qry); break; case 3: qry = "CREATE TABLE favs (id INTEGER PRIMARY KEY NOT NULL)"; stmt.executeUpdate(qry); qry = "UPDATE settings SET val = '4' WHERE var = 'schema'"; stmt.executeUpdate(qry); break; case 4: qry = "DROP TABLE log"; stmt.executeUpdate(qry); qry = "UPDATE settings SET val = '5' WHERE var = 'schema'"; stmt.executeUpdate(qry); break; case 5: qry = "UPDATE settings SET val = '120000' WHERE var = 'SleepTime'"; stmt.executeUpdate(qry); qry = "UPDATE settings set val = '6' WHERE var = 'schema'"; stmt.executeUpdate(qry); break; } i++; } conn.commit(); } } catch (SQLException e) { try { conn.rollback(); } catch (SQLException e2) { LOG.trace(SQL_ERROR, e2); LOG.error(e2); } LOG.trace(SQL_ERROR, e); LOG.fatal(e); throw new IOException("Error upgrading data store", e); } finally { try { if (stmt != null) { stmt.close(); } conn.setAutoCommit(true); } catch (SQLException e) { LOG.trace(SQL_ERROR, e); throw new IOException("Unable to cleanup SQL resources", e); } } } Code Sample 2: public static void writeInputStreamToFile(final InputStream stream, final File target) { long size = 0; FileOutputStream fileOut; try { fileOut = new FileOutputStream(target); size = IOUtils.copyLarge(stream, fileOut); } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } if (log.isInfoEnabled()) { log.info("Wrote " + size + " bytes to " + target.getAbsolutePath()); } else { System.out.println("Wrote " + size + " bytes to " + target.getAbsolutePath()); } }
00
Code Sample 1: public static void copyFile(File source, File destination) throws IOException { FileChannel srcChannel = new FileInputStream(source).getChannel(); FileChannel destChannel = new FileOutputStream(destination).getChannel(); try { int maxCount = (64 * 1024 * 1024) - (32 * 1024); long size = srcChannel.size(); long position = 0; while (position < size) { position += srcChannel.transferTo(position, maxCount, destChannel); } } finally { if (srcChannel != null) srcChannel.close(); if (destChannel != null) destChannel.close(); } } Code Sample 2: public int executeBatch(String[] commands, String applicationid) throws Exception { Statement statement = null; int errors = 0; int commandCount = 0; Connection conn = null; try { conn = getConnection(applicationid); conn.setAutoCommit(false); statement = conn.createStatement(); for (int i = 0; i < commands.length; i++) { String command = commands[i]; if (command.trim().length() == 0) { continue; } commandCount++; try { log.info("executing SQL: " + command); int results = statement.executeUpdate(command); log.info("After execution, " + results + " row(s) have been changed"); } catch (SQLException ex) { throw ex; } } conn.commit(); log.info("Executed " + commandCount + " SQL command(s) with " + errors + " error(s)"); } catch (SQLException ex) { if (conn != null) { conn.rollback(); } throw ex; } catch (Exception e) { if (conn != null) { conn.rollback(); } throw e; } finally { statement.close(); } return errors; }
00
Code Sample 1: public static void main(String[] args) { if (args.length != 2) { System.out.println("Usage: HashCalculator <Algorithm> <Input>"); System.out.println("The preferred algorithm is SHA."); } else { MessageDigest md; try { md = MessageDigest.getInstance(args[0]); md.update(args[1].getBytes()); System.out.print("Hashed value of " + args[1] + " is: "); System.out.println((new BASE64Encoder()).encode(md.digest())); } catch (NoSuchAlgorithmException e) { e.printStackTrace(); } } } Code Sample 2: @Test public void unacceptableMimeTypeTest() throws IOException { HttpClient httpclient = new DefaultHttpClient(); HttpPost httppost = new HttpPost("http://localhost:8080/alfresco/sword/deposit/company_home"); File file = new File("/Library/Application Support/Apple/iChat Icons/Planets/Mars.gif"); FileEntity entity = new FileEntity(file, "text/xml"); entity.setChunked(true); httppost.setEntity(entity); Date date = new Date(); Long time = date.getTime(); httppost.addHeader("content-disposition", "filename=x" + time + "x.gif"); System.out.println("Executing request...." + httppost.getRequestLine()); HttpResponse response = httpclient.execute(httppost); HttpEntity resEntity = response.getEntity(); if (resEntity != null) { InputStream is = resEntity.getContent(); BufferedReader br = new BufferedReader(new InputStreamReader(is)); String line = ""; while ((line = br.readLine()) != null) { if (!line.isEmpty()) System.out.println(line); } } if (resEntity != null) { resEntity.consumeContent(); } httpclient.getConnectionManager().shutdown(); }
00
Code Sample 1: public static boolean decodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.DECODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; } Code Sample 2: @Override public void actionPerformed(ActionEvent e) { if (e.getSource() == btnClear) { passwordField.setText(""); } for (int i = 0; i < 10; i++) { if (e.getSource() == btnNumber[i]) { String password = new String((passwordField.getPassword())); passwordField.setText(password + i); } } if (e.getSource() == btnOK) { String password = new String((passwordField.getPassword())); ResultSet rs; Statement stmt; String sql; String result = ""; boolean checkPassword = false; sql = "select password from Senhas_De_Unica_Vez where login='" + login + "'" + " and key=" + key + " "; try { theConn = DatabaseConnection.getConnection(); stmt = theConn.createStatement(); rs = stmt.executeQuery(sql); while (rs.next()) { result = rs.getString("password"); } rs.close(); stmt.close(); try { MessageDigest messageDigest = MessageDigest.getInstance("SHA1"); messageDigest.update(password.getBytes()); BigInteger bigInt = new BigInteger(1, messageDigest.digest()); String output = bigInt.toString(16); if (output.compareTo(result) == 0) checkPassword = true; else checkPassword = false; } catch (NoSuchAlgorithmException exception) { exception.printStackTrace(); } } catch (Exception exception) { exception.printStackTrace(); } finally { try { if (theConn != null) theConn.close(); } catch (Exception exception) { } } if (checkPassword == true) { JOptionPane.showMessageDialog(null, "senha correta!"); sql = "delete from Senhas_De_Unica_Vez where login='" + login + "'" + " and key=" + key + " "; try { theConn = DatabaseConnection.getConnection(); stmt = theConn.createStatement(); stmt.executeUpdate(sql); stmt.close(); } catch (Exception exception) { exception.printStackTrace(); } finally { try { if (theConn != null) theConn.close(); } catch (Exception exception) { } } setVisible(false); setTries(0); Error.log(4003, "Senha de uso �nico verificada positivamente."); Error.log(4002, "Autentica��o etapa 3 encerrada."); ManagerWindow mw = new ManagerWindow(login); mw.setDefaultCloseOperation(JFrame.EXIT_ON_CLOSE); } else { JOptionPane.showMessageDialog(null, "senha incorreta!"); int tries = getTries(); if (tries == 0) { Error.log(4004, "Primeiro erro da senha de uso �nico contabilizado."); } else if (tries == 1) { Error.log(4005, "Segundo erro da senha de uso �nico contabilizado."); } else if (tries == 2) { Error.log(4006, "Terceiro erro da senha de uso �nico contabilizado."); Error.log(4007, "Acesso do usuario " + login + " bloqueado pela autentica��o etapa 3."); Error.log(4002, "Autentica��o etapa 3 encerrada."); Error.log(1002, "Sistema encerrado."); setTries(++tries); System.exit(1); } setTries(++tries); } } }
00
Code Sample 1: @Override public DataTable generateDataTable(Query query, HttpServletRequest request) throws DataSourceException { String url = request.getParameter(URL_PARAM_NAME); if (StringUtils.isEmpty(url)) { log.error("url parameter not provided."); throw new DataSourceException(ReasonType.INVALID_REQUEST, "url parameter not provided"); } Reader reader; try { reader = new BufferedReader(new InputStreamReader(new URL(url).openStream())); } catch (MalformedURLException e) { log.error("url is malformed: " + url); throw new DataSourceException(ReasonType.INVALID_REQUEST, "url is malformed: " + url); } catch (IOException e) { log.error("Couldn't read from url: " + url, e); throw new DataSourceException(ReasonType.INVALID_REQUEST, "Couldn't read from url: " + url); } DataTable dataTable = null; ULocale requestLocale = DataSourceHelper.getLocaleFromRequest(request); try { dataTable = CsvDataSourceHelper.read(reader, null, true, requestLocale); } catch (IOException e) { log.error("Couldn't read from url: " + url, e); throw new DataSourceException(ReasonType.INVALID_REQUEST, "Couldn't read from url: " + url); } return dataTable; } Code Sample 2: public APIResponse delete(String id) throws Exception { APIResponse response = new APIResponse(); connection = (HttpURLConnection) new URL(url + "/api/transaction/delete/" + id).openConnection(); connection.setRequestMethod("DELETE"); connection.setConnectTimeout(TIMEOUT); connection.connect(); if (connection.getResponseCode() == HttpURLConnection.HTTP_OK) { response.setDone(true); response.setMessage("Transaction Deleted!"); } else { response.setDone(false); response.setMessage("Delete Transaction Error Code: Http (" + connection.getResponseCode() + ")"); } connection.disconnect(); return response; }
00
Code Sample 1: private static void copy(String from_name, String to_name) throws IOException { File from_file = new File(from_name); File to_file = new File(to_name); if (!from_file.exists()) abort("�������� ���� �� ���������" + from_file); if (!from_file.isFile()) abort("���������� ����������� ��������" + from_file); if (!from_file.canRead()) abort("�������� ���� ���������� ��� ������" + from_file); if (from_file.isDirectory()) to_file = new File(to_file, from_file.getName()); if (to_file.exists()) { if (!to_file.canWrite()) abort("�������� ���� ���������� ��� ������" + to_file); System.out.println("������������ ������� ����?" + to_file.getName() + "?(Y/N):"); System.out.flush(); BufferedReader in = new BufferedReader(new InputStreamReader(System.in)); String response = in.readLine(); if (!response.equals("Y") && !response.equals("y")) abort("������������ ���� �� ��� �����������"); } else { String parent = to_file.getParent(); if (parent == null) parent = System.getProperty("user.dir"); File dir = new File(parent); if (!dir.exists()) abort("������� ���������� �� ���������" + parent); if (!dir.isFile()) abort("�� �������� ���������" + parent); if (!dir.canWrite()) abort("������ �� ������" + parent); } FileInputStream from = null; FileOutputStream to = null; try { from = new FileInputStream(from_file); to = new FileOutputStream(to_file); byte[] buffer = new byte[4096]; int bytes_read; while ((bytes_read = from.read(buffer)) != -1) to.write(buffer, 0, bytes_read); } finally { if (from != null) try { from.close(); } catch (IOException e) { ; } if (to != null) try { to.close(); } catch (IOException e) { ; } } } Code Sample 2: public RawCandidate getRawCandidate(long candId) throws BookKeeprCommunicationException { try { synchronized (httpClient) { HttpGet req = new HttpGet(remoteHost.getUrl() + "/cand/" + Long.toHexString(candId)); req.setHeader("Accept-Encoding", "gzip"); HttpResponse resp = httpClient.execute(req); if (resp.getStatusLine().getStatusCode() == HttpStatus.SC_OK) { try { InputStream in = resp.getEntity().getContent(); Header hdr = resp.getFirstHeader("Content-Encoding"); String enc = ""; if (hdr != null) { enc = resp.getFirstHeader("Content-Encoding").getValue(); } if (enc.equals("gzip")) { in = new GZIPInputStream(in); } XMLAble xmlable = XMLReader.read(in); in.close(); if (xmlable instanceof RawCandidate) { RawCandidate p = (RawCandidate) xmlable; return p; } else { throw new BookKeeprCommunicationException("BookKeepr returned the wrong thing for candId"); } } catch (SAXException ex) { Logger.getLogger(BookKeeprConnection.class.getName()).log(Level.WARNING, "Got a malformed message from the bookkeepr", ex); throw new BookKeeprCommunicationException(ex); } } else { resp.getEntity().consumeContent(); throw new BookKeeprCommunicationException("Got a " + resp.getStatusLine().getStatusCode() + " from the BookKeepr"); } } } catch (HttpException ex) { throw new BookKeeprCommunicationException(ex); } catch (IOException ex) { throw new BookKeeprCommunicationException(ex); } catch (URISyntaxException ex) { throw new BookKeeprCommunicationException(ex); } }
11
Code Sample 1: private boolean copyAvecProgressNIO(File sRC2, File dEST2, JProgressBar progressEnCours) throws IOException { boolean resultat = false; FileInputStream fis = new FileInputStream(sRC2); FileOutputStream fos = new FileOutputStream(dEST2); java.nio.channels.FileChannel channelSrc = fis.getChannel(); java.nio.channels.FileChannel channelDest = fos.getChannel(); progressEnCours.setValue(0); progressEnCours.setString(sRC2 + " : 0 %"); channelSrc.transferTo(0, channelSrc.size(), channelDest); progressEnCours.setValue(100); progressEnCours.setString(sRC2 + " : 100 %"); if (channelSrc.size() == channelDest.size()) { resultat = true; } else { resultat = false; } fis.close(); fos.close(); return (resultat); } Code Sample 2: private FileLog(LOG_LEVEL displayLogLevel, LOG_LEVEL logLevel, String logPath) { this.logLevel = logLevel; this.displayLogLevel = displayLogLevel; if (null != logPath) { logFile = new File(logPath, "current.log"); log(LOG_LEVEL.DEBUG, "FileLog", "Initialising logfile " + logFile.getAbsolutePath() + " ."); try { if (logFile.exists()) { if (!logFile.renameTo(new File(logPath, System.currentTimeMillis() + ".log"))) { File newFile = new File(logPath, System.currentTimeMillis() + ".log"); if (newFile.exists()) { log(LOG_LEVEL.WARN, "FileLog", "The file (" + newFile.getAbsolutePath() + newFile.getName() + ") already exists, will overwrite it."); newFile.delete(); } newFile.createNewFile(); FileInputStream inStream = new FileInputStream(logFile); FileOutputStream outStream = new FileOutputStream(newFile); byte buffer[] = null; int offSet = 0; while (inStream.read(buffer, offSet, 2048) != -1) { outStream.write(buffer); offSet += 2048; } inStream.close(); outStream.close(); logFile.delete(); logFile = new File(logPath, "current.log"); } } logFile.createNewFile(); } catch (IOException e) { logFile = null; } } else { logFile = null; } }
00
Code Sample 1: private static long copy(InputStream source, OutputStream sink) { try { return IOUtils.copyLarge(source, sink); } catch (IOException e) { throw new FaultException("System error copying stream", e); } finally { IOUtils.closeQuietly(source); IOUtils.closeQuietly(sink); } } Code Sample 2: private static Map<String, File> loadServiceCache() { ArrayList<String> preferredOrder = new ArrayList<String>(); HashMap<String, File> serviceFileMapping = new HashMap<String, File>(); File file = new File(IsqlToolkit.getBaseDirectory(), CACHE_FILE); if (!file.exists()) { return serviceFileMapping; } if (file.canRead()) { FileReader fileReader = null; try { fileReader = new FileReader(file); BufferedReader lineReader = new BufferedReader(fileReader); while (lineReader.ready()) { String data = lineReader.readLine(); if (data.charAt(0) == '#') { continue; } int idx0 = 0; int idx1 = data.indexOf(SERVICE_FIELD_SEPERATOR); String name = StringUtilities.decodeASCII(data.substring(idx0, idx1)); String uri = StringUtilities.decodeASCII(data.substring(idx1 + 1)); if (name.equalsIgnoreCase(KEY_SERVICE_LIST)) { StringTokenizer st = new StringTokenizer(uri, SERVICE_SEPERATOR); while (st.hasMoreTokens()) { String serviceName = st.nextToken(); preferredOrder.add(serviceName.toLowerCase().trim()); } continue; } try { URL url = new URL(uri); File serviceFile = new File(url.getFile()); if (serviceFile.isDirectory()) { logger.warn(messages.format("compatability_kit.service_mapped_to_directory", name, uri)); continue; } else if (!serviceFile.canRead()) { logger.warn(messages.format("compatability_kit.service_not_readable", name, uri)); continue; } else if (!serviceFile.exists()) { logger.warn(messages.format("compatability_kit.service_does_not_exist", name, uri)); continue; } String bindName = name.toLowerCase().trim(); InputStream inputStream = null; try { inputStream = url.openStream(); InputSource inputSource = new InputSource(inputStream); bindName = ServiceDigester.parseService(inputSource, IsqlToolkit.getSharedEntityResolver()).getName(); } catch (Exception error) { continue; } if (serviceFileMapping.put(bindName, serviceFile) != null) { logger.warn(messages.format("compatability_kit.service_duplicate_name_error", name, uri)); } } catch (MalformedURLException e) { logger.error(messages.format("compatability_kit.service_uri_error", name, uri), e); } } } catch (IOException ioe) { logger.error("compatability_kit.service_generic_error", ioe); } finally { if (fileReader != null) { try { fileReader.close(); } catch (Throwable ignored) { } } } } return serviceFileMapping; }
00
Code Sample 1: private void copy(File from, File to) throws IOException { InputStream in = new FileInputStream(from); OutputStream out = new FileOutputStream(to); byte[] line = new byte[16384]; int bytes = -1; while ((bytes = in.read(line)) != -1) out.write(line, 0, bytes); in.close(); out.close(); } Code Sample 2: private String md5(String value) { String md5Value = "1"; try { MessageDigest digest = MessageDigest.getInstance("MD5"); digest.update(value.getBytes()); md5Value = getHex(digest.digest()); } catch (Exception e) { e.printStackTrace(); } return md5Value; }
00
Code Sample 1: public byte[] md5(String clearText) { MessageDigest md; byte[] digest; try { md = MessageDigest.getInstance("MD5"); md.update(clearText.getBytes()); digest = md.digest(); } catch (NoSuchAlgorithmException e) { throw new UnsupportedOperationException(e.toString()); } return digest; } Code Sample 2: public static boolean decodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.DECODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; }
00
Code Sample 1: protected File compress(File orig, IWrapCompression wrapper) throws IOException { File compressed = File.createTempFile("test.", ".gz"); FileOutputStream fos = new FileOutputStream(compressed); OutputStream wos = wrapper.wrap(fos); FileInputStream fis = new FileInputStream(orig); IOUtils.copy(fis, wos); IOUtils.closeQuietly(fis); IOUtils.closeQuietly(wos); return compressed; } Code Sample 2: protected Class findClass(String name) throws ClassNotFoundException { String classFile = name.replace('.', '/') + ".class"; InputStream classInputStream = null; if (this.extensionJars != null) { for (int i = 0; i < this.extensionJars.length; i++) { JarFile extensionJar = this.extensionJars[i]; JarEntry jarEntry = extensionJar.getJarEntry(classFile); if (jarEntry != null) { try { classInputStream = extensionJar.getInputStream(jarEntry); } catch (IOException ex) { throw new ClassNotFoundException("Couldn't read class " + name, ex); } } } } if (classInputStream == null) { URL url = getResource(classFile); if (url == null) { throw new ClassNotFoundException("Class " + name); } try { classInputStream = url.openStream(); } catch (IOException ex) { throw new ClassNotFoundException("Couldn't read class " + name, ex); } } try { ByteArrayOutputStream out = new ByteArrayOutputStream(); BufferedInputStream in = new BufferedInputStream(classInputStream); byte[] buffer = new byte[8096]; int size; while ((size = in.read(buffer)) != -1) { out.write(buffer, 0, size); } in.close(); return defineClass(name, out.toByteArray(), 0, out.size(), this.protectionDomain); } catch (IOException ex) { throw new ClassNotFoundException("Class " + name, ex); } }
00
Code Sample 1: public int executeUpdate(String query, QueryParameter params) throws DAOException { PreparedStatement ps = null; Query queryObj = getModel().getQuery(query); if (conditionalQueries != null && conditionalQueries.containsKey(query)) { queryObj = (Query) conditionalQueries.get(query); } String sql = queryObj.getStatement(params.getVariables()); logger.debug(sql); try { if (con == null || con.isClosed()) { con = DataSource.getInstance().getConnection(getModel().getDataSource()); } ps = con.prepareStatement(sql); setParameters(ps, queryObj, params); return ps.executeUpdate(); } catch (SQLException e) { logger.error("DataBase Error :", e); if (transactionMode) rollback(); transactionMode = false; throw new DAOException("Unexpected Error Query (" + query + ")", "error.DAO.database", e.getMessage()); } catch (Exception ex) { logger.error("Error :", ex); if (transactionMode) rollback(); transactionMode = false; throw new DAOException("Unexpected Error Query (" + query + ")", "error.DAO.database", ex.getMessage()); } finally { try { if (!transactionMode) con.commit(); if (ps != null) ps.close(); if (!transactionMode && con != null) con.close(); } catch (SQLException e) { throw new DAOException("Unexpected Error Query (" + query + ")", "error.DAO.database", e.getMessage()); } } } Code Sample 2: void getAddress(String lat, String lag) { try { URL url = new URL("http://maps.google.cn/maps/geo?key=abcdefg&q=" + lat + "," + lag); InputStream inputStream = url.openConnection().getInputStream(); InputStreamReader inputReader = new InputStreamReader(inputStream, "utf-8"); BufferedReader bufReader = new BufferedReader(inputReader); String line = "", lines = ""; while ((line = bufReader.readLine()) != null) { lines += line; } if (!lines.equals("")) { JSONObject jsonobject = new JSONObject(lines); JSONArray jsonArray = new JSONArray(jsonobject.get("Placemark").toString()); for (int i = 0; i < jsonArray.length(); i++) { mTextView.setText(mTextView.getText() + "\n" + jsonArray.getJSONObject(i).getString("address")); } } } catch (Exception e) { ; } }
11
Code Sample 1: public static String SHA256(String source) { logger.info(source); String result = null; try { MessageDigest digest = MessageDigest.getInstance("SHA-256"); digest.update(source.getBytes()); byte[] bytes = digest.digest(); result = EncodeUtils.hexEncode(bytes); } catch (NoSuchAlgorithmException e) { e.printStackTrace(); } logger.info(result); return result; } Code Sample 2: public static String MD5(String text) throws NoSuchAlgorithmException, UnsupportedEncodingException { MessageDigest md; md = MessageDigest.getInstance("MD5"); byte[] md5hash = new byte[32]; md.update(text.getBytes("iso-8859-1"), 0, text.length()); md5hash = md.digest(); return convertToHex(md5hash); }
11
Code Sample 1: private static void insertModuleInEar(File fromEar, File toEar, String moduleType, String moduleName, String contextRoot) throws Exception { ZipInputStream earFile = new ZipInputStream(new FileInputStream(fromEar)); FileOutputStream fos = new FileOutputStream(toEar); ZipOutputStream tempZip = new ZipOutputStream(fos); ZipEntry next = earFile.getNextEntry(); while (next != null) { ByteArrayOutputStream content = new ByteArrayOutputStream(); byte[] data = new byte[30000]; int numberread; while ((numberread = earFile.read(data)) != -1) { content.write(data, 0, numberread); } if (next.getName().equals("META-INF/application.xml")) { content = insertModule(earFile, next, content, moduleType, moduleName, contextRoot); next = new ZipEntry("META-INF/application.xml"); } tempZip.putNextEntry(next); tempZip.write(content.toByteArray()); next = earFile.getNextEntry(); } earFile.close(); tempZip.close(); fos.close(); } Code Sample 2: static void copy(String src, String dest) throws IOException { File ifp = new File(src); File ofp = new File(dest); if (ifp.exists() == false) { throw new IOException("file '" + src + "' does not exist"); } FileInputStream fis = new FileInputStream(ifp); FileOutputStream fos = new FileOutputStream(ofp); byte[] b = new byte[1024]; while (fis.read(b) > 0) fos.write(b); fis.close(); fos.close(); }
11
Code Sample 1: public static void concatenateToDestFile(File sourceFile, File destFile) throws IOException { if (!destFile.exists()) { if (!destFile.createNewFile()) { throw new IllegalArgumentException("Could not create destination file:" + destFile.getName()); } } BufferedOutputStream bufferedOutputStream = null; BufferedInputStream bufferedInputStream = null; byte[] buffer = new byte[1024]; try { bufferedOutputStream = new BufferedOutputStream(new FileOutputStream(destFile, true)); bufferedInputStream = new BufferedInputStream(new FileInputStream(sourceFile)); while (true) { int readByte = bufferedInputStream.read(buffer, 0, buffer.length); if (readByte == -1) { break; } bufferedOutputStream.write(buffer, 0, readByte); } } finally { if (bufferedOutputStream != null) { bufferedOutputStream.close(); } if (bufferedInputStream != null) { bufferedInputStream.close(); } } } Code Sample 2: public static void main(String[] args) throws Exception { if (args.length != 2) { PrintUtil.prt("arguments: sourcefile, destfile"); System.exit(1); } FileChannel in = new FileInputStream(args[0]).getChannel(), out = new FileOutputStream(args[1]).getChannel(); ByteBuffer buff = ByteBuffer.allocate(BSIZE); while (in.read(buff) != -1) { PrintUtil.prt("%%%"); buff.flip(); out.write(buff); buff.clear(); } }
11
Code Sample 1: @Override public byte[] read(String path) throws PersistenceException { path = fmtPath(path); try { S3Object fileObj = s3Service.getObject(bucketObj, path); ByteArrayOutputStream out = new ByteArrayOutputStream(); IOUtils.copy(fileObj.getDataInputStream(), out); return out.toByteArray(); } catch (Exception e) { throw new PersistenceException("fail to read s3 file - " + path, e); } } Code Sample 2: public static String stringOfUrl(String addr) throws IOException { ByteArrayOutputStream output = new ByteArrayOutputStream(); URL url = new URL(addr); IOUtils.copy(url.openStream(), output); return output.toString(); }
00
Code Sample 1: public InputStream getDaoConfig(String connectionType) throws IOException { URL url = null; InputStream inStream = null; if (connectionType.equals(SQL.ORACLE)) { url = com.apelon.selext.db.config.MatchLoadConfig.class.getResource("oracle.xml"); } else if (connectionType.equals(SQL.SQL2K)) { url = com.apelon.selext.db.config.MatchLoadConfig.class.getResource("sql2k.xml"); } else if (connectionType.equals(SQL.CACHE)) { url = com.apelon.selext.db.config.MatchLoadConfig.class.getResource("cache.xml"); } else if (connectionType.equals(SQL.DB2)) { url = com.apelon.selext.db.config.MatchLoadConfig.class.getResource("db2.xml"); } else { Categories.dataXml().error("* Problem: Unknown connection type: " + connectionType); } try { inStream = url.openStream(); } catch (NullPointerException npe) { Categories.dataXml().error("* Problem: Undefined resource URL: " + npe.getMessage()); throw npe; } return inStream; } Code Sample 2: public void process(String dir) { String[] list = new File(dir).list(); if (list == null) return; int n = list.length; long[] bubblesort = new long[list.length + 1]; if (!statustext) { IJ.log("Current Directory is: " + dir); IJ.log(" "); IJ.log("DICOM File Name / " + prefix1 + " / " + prefix2 + " / " + prefix3 + " / " + pick); IJ.log(" "); } for (int i = 0; i < n; i++) { IJ.showStatus(i + "/" + n); File f = new File(dir + list[i]); if (!f.isDirectory()) { ImagePlus img = new Opener().openImage(dir, list[i]); if (img != null && img.getStackSize() == 1) { if (!scoutengine(img)) return; if (!statustext) { IJ.log(list[i] + "/" + whichprefix1 + "/" + whichprefix2 + "/" + whichprefix3 + "/" + whichcase); } int lastDigit = whichcase.length() - 1; while (lastDigit > 0) { if (!Character.isDigit(whichcase.charAt(lastDigit))) lastDigit -= 1; else break; } if (lastDigit < whichcase.length() - 1) whichcase = whichcase.substring(0, lastDigit + 1); bubblesort[i] = Long.parseLong(whichcase); } } } if (statussorta || statussortd || statustext) { boolean sorted = false; while (!sorted) { sorted = true; for (int i = 0; i < n - 1; i++) { if (statussorta) { if (bubblesort[i] > bubblesort[i + 1]) { long temp = bubblesort[i]; tempp = list[i]; bubblesort[i] = bubblesort[i + 1]; list[i] = list[i + 1]; bubblesort[i + 1] = temp; list[i + 1] = tempp; sorted = false; } } else { if (bubblesort[i] < bubblesort[i + 1]) { long temp = bubblesort[i]; tempp = list[i]; bubblesort[i] = bubblesort[i + 1]; list[i] = list[i + 1]; bubblesort[i + 1] = temp; list[i + 1] = tempp; sorted = false; } } } } IJ.log(" "); for (int i = 0; i < n; i++) { if (!statustext) { IJ.log(list[i] + " / " + bubblesort[i]); } else { IJ.log(dir + list[i]); } } } if (open_as_stack || only_images) { boolean sorted = false; while (!sorted) { sorted = true; for (int i = 0; i < n - 1; i++) { if (bubblesort[i] > bubblesort[i + 1]) { long temp = bubblesort[i]; tempp = list[i]; bubblesort[i] = bubblesort[i + 1]; list[i] = list[i + 1]; bubblesort[i + 1] = temp; list[i + 1] = tempp; sorted = false; } } } if (only_images) { Opener o = new Opener(); int counter = 0; IJ.log(" "); for (int i = 0; i < n; i++) { String path = (dir + list[i]); if (path == null) break; else { ImagePlus imp = o.openImage(path); counter++; if (imp != null) { IJ.log(counter + " + " + path); imp.show(); } else IJ.log(counter + " - " + path); } } return; } int width = 0, height = 0, type = 0; ImageStack stack = null; double min = Double.MAX_VALUE; double max = -Double.MAX_VALUE; int k = 0; try { for (int i = 0; i < n; i++) { String path = (dir + list[i]); if (path == null) break; if (list[i].endsWith(".txt")) continue; ImagePlus imp = new Opener().openImage(path); if (imp != null && stack == null) { width = imp.getWidth(); height = imp.getHeight(); type = imp.getType(); ColorModel cm = imp.getProcessor().getColorModel(); if (halfSize) stack = new ImageStack(width / 2, height / 2, cm); else stack = new ImageStack(width, height, cm); } if (stack != null) k = stack.getSize() + 1; IJ.showStatus(k + "/" + n); IJ.showProgress((double) k / n); if (imp == null) IJ.log(list[i] + ": unable to open"); else if (imp.getWidth() != width || imp.getHeight() != height) IJ.log(list[i] + ": wrong dimensions"); else if (imp.getType() != type) IJ.log(list[i] + ": wrong type"); else { ImageProcessor ip = imp.getProcessor(); if (grayscale) ip = ip.convertToByte(true); if (halfSize) ip = ip.resize(width / 2, height / 2); if (ip.getMin() < min) min = ip.getMin(); if (ip.getMax() > max) max = ip.getMax(); String label = imp.getTitle(); String info = (String) imp.getProperty("Info"); if (info != null) label += "\n" + info; stack.addSlice(label, ip); } System.gc(); } } catch (OutOfMemoryError e) { IJ.outOfMemory("FolderOpener"); stack.trim(); } if (stack != null && stack.getSize() > 0) { ImagePlus imp2 = new ImagePlus("Stack", stack); if (imp2.getType() == ImagePlus.GRAY16 || imp2.getType() == ImagePlus.GRAY32) imp2.getProcessor().setMinAndMax(min, max); imp2.show(); } IJ.showProgress(1.0); } }
00
Code Sample 1: @SuppressWarnings("unchecked") @Override public synchronized void drop(DropTargetDropEvent arg0) { Helper.log().debug("Dropped"); Transferable t = arg0.getTransferable(); try { arg0.acceptDrop(arg0.getDropAction()); List<File> filelist = (List<File>) t.getTransferData(t.getTransferDataFlavors()[0]); for (File file : filelist) { Helper.log().debug(file.getAbsolutePath()); if (file.getName().toLowerCase().contains(".lnk")) { Helper.log().debug(file.getName() + " is a link"); File target = new File(rp.getRoot().getFullPath() + "/" + file.getName()); Helper.log().debug("I have opened the mayor at " + target.getAbsolutePath()); FileOutputStream fo = new FileOutputStream(target); FileInputStream fi = new FileInputStream(file); int i = 0; while (fi.available() > 0) { fo.write(fi.read()); System.out.print("."); i++; } Helper.log().debug(i + " bytes have been written to " + target.getAbsolutePath()); fo.close(); fi.close(); } } rp.redraw(); } catch (Throwable tr) { tr.printStackTrace(); } Helper.log().debug(arg0.getSource().toString()); } Code Sample 2: public Object[] bubblesort(Object[] tosort) { Boolean sorting; int upperlimit = tosort.length - 1; do { sorting = false; for (int s0 = 0; s0 < upperlimit; s0++) { if (tosort[s0].toString().compareTo(tosort[s0 + 1].toString()) < 0) { } else if (tosort[s0].toString().compareTo(tosort[s0 + 1].toString()) == 0) { Object[] tosortnew = new Object[tosort.length - 1]; for (int tmp = 0; tmp < s0; tmp++) { tosortnew[tmp] = tosort[tmp]; } for (int tmp = s0; tmp < tosortnew.length; tmp++) { tosortnew[tmp] = tosort[tmp + 1]; } tosort = tosortnew; upperlimit = upperlimit - 1; s0 = s0 - 1; } else if (tosort[s0].toString().compareTo(tosort[s0 + 1].toString()) > 0) { String swap = (String) tosort[s0]; tosort[s0] = tosort[s0 + 1]; tosort[s0 + 1] = swap; sorting = true; } } upperlimit = upperlimit - 1; } while (sorting); return tosort; }
00
Code Sample 1: public static void copy(File file, File dir, boolean overwrite) throws IOException { BufferedInputStream bis = new BufferedInputStream(new FileInputStream(file)); File out = new File(dir, file.getName()); if (out.exists() && !overwrite) { throw new IOException("File: " + out + " already exists."); } FileOutputStream fos = new FileOutputStream(out, false); byte[] block = new byte[4096]; int read = bis.read(block); while (read != -1) { fos.write(block, 0, read); read = bis.read(block); } } Code Sample 2: public void actualizar() throws SQLException, ClassNotFoundException, Exception { Connection conn = null; PreparedStatement ms = null; registroActualizado = false; try { conn = ToolsBD.getConn(); conn.setAutoCommit(false); Date fechaSystem = new Date(); DateFormat aaaammdd = new SimpleDateFormat("yyyyMMdd"); int fzafsis = Integer.parseInt(aaaammdd.format(fechaSystem)); DateFormat hhmmss = new SimpleDateFormat("HHmmss"); DateFormat sss = new SimpleDateFormat("S"); String ss = sss.format(fechaSystem); if (ss.length() > 2) { ss = ss.substring(0, 2); } int fzahsis = Integer.parseInt(hhmmss.format(fechaSystem) + ss); ms = conn.prepareStatement(SENTENCIA_UPDATE); if (fechaOficio != null && !fechaOficio.equals("")) { if (fechaOficio.matches("\\d{8}")) { ms.setInt(1, Integer.parseInt(fechaOficio)); } else { int fzafent = 0; try { fechaTest = dateF.parse(fechaOficio); Calendar cal = Calendar.getInstance(); cal.setTime(fechaTest); DateFormat date1 = new SimpleDateFormat("yyyyMMdd"); fzafent = Integer.parseInt(date1.format(fechaTest)); } catch (Exception e) { } ms.setInt(1, fzafent); } } else { ms.setInt(1, 0); } ms.setString(2, descripcion); ms.setInt(3, Integer.parseInt(anoSalida)); ms.setInt(4, Integer.parseInt(oficinaSalida)); ms.setInt(5, Integer.parseInt(numeroSalida)); ms.setString(6, nulo); ms.setString(7, motivosNulo); ms.setString(8, usuarioNulo); if (fechaNulo != null && !fechaNulo.equals("")) { int fzafent = 0; try { fechaTest = dateF.parse(fechaNulo); Calendar cal = Calendar.getInstance(); cal.setTime(fechaTest); DateFormat date1 = new SimpleDateFormat("yyyyMMdd"); fzafent = Integer.parseInt(date1.format(fechaTest)); } catch (Exception e) { } ms.setInt(9, fzafent); } else { ms.setInt(9, 0); } if (fechaEntrada != null && !fechaEntrada.equals("")) { int fzafent = 0; try { fechaTest = dateF.parse(fechaEntrada); Calendar cal = Calendar.getInstance(); cal.setTime(fechaTest); DateFormat date1 = new SimpleDateFormat("yyyyMMdd"); fzafent = Integer.parseInt(date1.format(fechaTest)); } catch (Exception e) { } ms.setInt(10, fzafent); } else { ms.setInt(10, 0); } ms.setString(11, descartadoEntrada); ms.setString(12, usuarioEntrada); ms.setString(13, motivosDescarteEntrada); ms.setInt(14, anoEntrada != null ? Integer.parseInt(anoEntrada) : 0); ms.setInt(15, oficinaEntrada != null ? Integer.parseInt(oficinaEntrada) : 0); ms.setInt(16, numeroEntrada != null ? Integer.parseInt(numeroEntrada) : 0); ms.setInt(17, anoOficio != null ? Integer.parseInt(anoOficio) : 0); ms.setInt(18, oficinaOficio != null ? Integer.parseInt(oficinaOficio) : 0); ms.setInt(19, numeroOficio != null ? Integer.parseInt(numeroOficio) : 0); int afectados = ms.executeUpdate(); if (afectados > 0) { registroActualizado = true; } else { registroActualizado = false; } conn.commit(); } catch (Exception ex) { System.out.println("Error inesperat, no s'ha desat el registre: " + ex.getMessage()); ex.printStackTrace(); registroActualizado = false; errores.put("", "Error inesperat, no s'ha desat el registre" + ": " + ex.getClass() + "->" + ex.getMessage()); try { if (conn != null) conn.rollback(); } catch (SQLException sqle) { throw new RemoteException("S'ha produït un error i no s'han pogut tornar enrere els canvis efectuats", sqle); } throw new RemoteException("Error inesperat, no s'ha actualitzat la taula de gestió dels ofici de remissió.", ex); } finally { ToolsBD.closeConn(conn, ms, null); } }
11
Code Sample 1: public void putFile(CompoundName file, FileInputStream fileInput) throws IOException { File fullDir = new File(REMOTE_BASE_DIR.getCanonicalPath()); for (int i = 0; i < file.size() - 1; i++) fullDir = new File(fullDir, file.get(i)); fullDir.mkdirs(); File outputFile = new File(fullDir, file.get(file.size() - 1)); FileOutputStream outStream = new FileOutputStream(outputFile); for (int byteIn = fileInput.read(); byteIn != -1; byteIn = fileInput.read()) outStream.write(byteIn); fileInput.close(); outStream.close(); } Code Sample 2: public static void copyFile(File sourceFile, String toDir, boolean create, boolean overwrite) throws FileNotFoundException, IOException { FileInputStream source = null; FileOutputStream destination = null; byte[] buffer; int bytes_read; File toFile = new File(toDir); if (create && !toFile.exists()) toFile.mkdirs(); if (toFile.exists()) { File destFile = new File(toDir + "/" + sourceFile.getName()); try { if (!destFile.exists() || overwrite) { source = new FileInputStream(sourceFile); destination = new FileOutputStream(destFile); buffer = new byte[1024]; while (true) { bytes_read = source.read(buffer); if (bytes_read == -1) break; destination.write(buffer, 0, bytes_read); } } } catch (Exception exx) { exx.printStackTrace(); } finally { if (source != null) try { source.close(); } catch (IOException e) { } if (destination != null) try { destination.close(); } catch (IOException e) { } } } }
00
Code Sample 1: public RespID(PublicKey key) throws OCSPException { try { MessageDigest digest = MessageDigest.getInstance("SHA1"); ASN1InputStream aIn = new ASN1InputStream(key.getEncoded()); SubjectPublicKeyInfo info = SubjectPublicKeyInfo.getInstance(aIn.readObject()); digest.update(info.getPublicKeyData().getBytes()); ASN1OctetString keyHash = new DEROctetString(digest.digest()); this.id = new ResponderID(keyHash); } catch (Exception e) { throw new OCSPException("problem creating ID: " + e, e); } } Code Sample 2: protected String getPostRequestContent(String urlText, String postParam) throws Exception { URL url = new URL(urlText); HttpURLConnection urlcon = (HttpURLConnection) url.openConnection(); urlcon.setRequestMethod("POST"); urlcon.setUseCaches(false); urlcon.setDoOutput(true); PrintStream ps = new PrintStream(urlcon.getOutputStream()); ps.print(postParam); ps.close(); urlcon.connect(); BufferedReader reader = new BufferedReader(new InputStreamReader(urlcon.getInputStream())); String line = reader.readLine(); reader.close(); urlcon.disconnect(); return line; }
00
Code Sample 1: private String encryptPassword(String password) { String result = password; if (password != null) { try { MessageDigest md5 = MessageDigest.getInstance("MD5"); md5.reset(); md5.update(password.getBytes()); BigInteger hash = new BigInteger(1, md5.digest()); result = hash.toString(16); if ((result.length() % 2) != 0) { result = "0" + result; } } catch (NoSuchAlgorithmException e) { e.printStackTrace(); getLogger().error("Cannot generate MD5", e); } } return result; } Code Sample 2: private void loadDBpediaOntology() { try { URL url = new URL("http://downloads.dbpedia.org/3.6/dbpedia_3.6.owl.bz2"); InputStream is = new BufferedInputStream(url.openStream()); CompressorInputStream in = new CompressorStreamFactory().createCompressorInputStream("bzip2", is); dbPediaOntology = OWLManager.createOWLOntologyManager().loadOntologyFromOntologyDocument(in); reasoner = PelletReasonerFactory.getInstance().createNonBufferingReasoner(dbPediaOntology); reasoner.precomputeInferences(InferenceType.CLASS_HIERARCHY); } catch (MalformedURLException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } catch (CompressorException e) { e.printStackTrace(); } catch (OWLOntologyCreationException e) { e.printStackTrace(); } }
11
Code Sample 1: protected void setTestContent(IDfDocument document, String testFileName) throws Exception { InputStream testFileIs = new BufferedInputStream(FileHelper.getFileAsStreamFromClassPath(testFileName)); ByteArrayOutputStream baos = new ByteArrayOutputStream(); IOUtils.copy(testFileIs, baos); String contentType = formatHelper.getFormatForExtension(FileHelper.getFileExtension(testFileName)); document.setContentType(contentType); document.setContent(baos); } Code Sample 2: public void SplitFile(File in, File out0, File out1, long pos) throws IOException { FileInputStream fis = new FileInputStream(in); FileOutputStream fos = new FileOutputStream(out0); FileChannel fic = fis.getChannel(); FileChannel foc = fos.getChannel(); foc.transferFrom(fic, 0, pos); foc.close(); fos = new FileOutputStream(out1); foc = fos.getChannel(); foc.transferFrom(fic, 0, fic.size() - pos); foc.close(); fic.close(); }
00
Code Sample 1: public static void copyFile(File sourceFile, File targetFile) throws FileCopyingException { try { FileInputStream inputStream = new FileInputStream(sourceFile); FileOutputStream outputStream = new FileOutputStream(targetFile); FileChannel readableChannel = inputStream.getChannel(); FileChannel writableChannel = outputStream.getChannel(); writableChannel.truncate(0); writableChannel.transferFrom(readableChannel, 0, readableChannel.size()); inputStream.close(); outputStream.close(); } catch (IOException ioException) { String exceptionMessage = "An error occurred when copying from the file \"" + sourceFile.getAbsolutePath() + "\" to the file \"" + targetFile.getAbsolutePath() + "\"."; throw new FileCopyingException(exceptionMessage, ioException); } } Code Sample 2: private FTPClient getFTPConnection(String strUser, String strPassword, String strServer, boolean binaryTransfer, String connectionNote) { FTPClient ftp = new FTPClient(); try { int reply; ftp.connect(strServer); ResourcePool.LogMessage(this, ResourcePool.INFO_MESSAGE, "Connected to " + strServer + ", " + connectionNote); reply = ftp.getReplyCode(); if (!FTPReply.isPositiveCompletion(reply)) { ftp.disconnect(); ResourcePool.LogMessage(this, ResourcePool.ERROR_MESSAGE, "FTP server refused connection."); return null; } } catch (IOException e) { if (ftp.isConnected()) { try { ftp.disconnect(); } catch (IOException f) { return null; } } ResourcePool.LogMessage(this, ResourcePool.ERROR_MESSAGE, "FTP Could not connect to server."); ResourcePool.LogException(e, this); return null; } try { if (!ftp.login(strUser, strPassword)) { ftp.logout(); ResourcePool.LogMessage(this, ResourcePool.ERROR_MESSAGE, "FTP login failed."); return null; } ResourcePool.LogMessage(this, ResourcePool.INFO_MESSAGE, "Remote system is " + ftp.getSystemName() + ", " + connectionNote); if (binaryTransfer) { ftp.setFileType(FTP.BINARY_FILE_TYPE); } else { ftp.setFileType(FTP.ASCII_FILE_TYPE); } ftp.enterLocalPassiveMode(); } catch (FTPConnectionClosedException e) { ResourcePool.LogMessage(this, ResourcePool.ERROR_MESSAGE, "Server closed connection."); ResourcePool.LogException(e, this); return null; } catch (IOException e) { ResourcePool.LogException(e, this); return null; } return ftp; }
11
Code Sample 1: @Override public void sendContent(OutputStream out, Range range, Map<String, String> params, String contentType) throws IOException { LOGGER.debug("DOWNLOAD - Send content: " + realFile.getAbsolutePath()); LOGGER.debug("Output stream: " + out.toString()); if (ServerConfiguration.isDynamicSEL()) { LOGGER.error("IS DINAMIC SEL????"); } else { } if (".tokens".equals(realFile.getName()) || ".response".equals(realFile.getName()) || ".request".equals(realFile.getName()) || isAllowedClient) { FileInputStream in = null; try { in = new FileInputStream(realFile); int bytes = IOUtils.copy(in, out); LOGGER.debug("System resource or Allowed Client wrote bytes: " + bytes); out.flush(); } catch (Exception e) { LOGGER.error("Error while uploading over encryption system " + realFile.getName() + " file", e); } finally { IOUtils.closeQuietly(in); } } else { FileInputStream in = null; try { in = new FileInputStream(realFile); int bytes = IOUtils.copy(in, out); LOGGER.debug("System resource or Allowed Client wrote bytes: " + bytes); out.flush(); } catch (Exception e) { LOGGER.error("Error while uploading over encryption system " + realFile.getName() + " file", e); } finally { IOUtils.closeQuietly(in); } } } Code Sample 2: private static void main(String[] args) { try { File f = new File("test.txt"); if (f.exists()) { throw new IOException(f + " already exists. I don't want to overwrite it."); } StraightStreamReader in; char[] cbuf = new char[0x1000]; int read; int totRead; FileOutputStream out = new FileOutputStream(f); for (int i = 0x00; i < 0x100; i++) { out.write(i); } out.close(); in = new StraightStreamReader(new FileInputStream(f)); for (int i = 0x00; i < 0x100; i++) { read = in.read(); if (read != i) { System.err.println("Error: " + i + " read as " + read); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = in.read(cbuf); if (totRead != 0x100) { System.err.println("Simple buffered read did not read the full amount: 0x" + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i]); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = 0; while (totRead <= 0x100 && (read = in.read(cbuf, totRead, 0x100 - totRead)) > 0) { totRead += read; } if (totRead != 0x100) { System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i]); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = 0; while (totRead <= 0x100 && (read = in.read(cbuf, totRead + 0x123, 0x100 - totRead)) > 0) { totRead += read; } if (totRead != 0x100) { System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i + 0x123] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i + 0x123]); } } in.close(); in = new StraightStreamReader(new FileInputStream(f)); totRead = 0; while (totRead <= 0x100 && (read = in.read(cbuf, totRead + 0x123, 7)) > 0) { totRead += read; } if (totRead != 0x100) { System.err.println("Not enough read. Bytes read: " + Integer.toHexString(totRead)); } for (int i = 0x00; i < totRead; i++) { if (cbuf[i + 0x123] != i) { System.err.println("Error: 0x" + i + " read as 0x" + cbuf[i + 0x123]); } } in.close(); f.delete(); } catch (IOException x) { System.err.println(x.getMessage()); } }
00
Code Sample 1: public final String latestVersion() { String latestVersion = ""; try { URL url = new URL(Constants.officialSite + ":80/LatestVersion"); BufferedReader in = new BufferedReader(new InputStreamReader(url.openStream())); String str; while ((str = in.readLine()) != null) { latestVersion = str; } in.close(); } catch (MalformedURLException e) { } catch (IOException e) { } return latestVersion; } Code Sample 2: public void writeOutput(String directory) throws IOException { File f = new File(directory); int i = 0; if (f.isDirectory()) { for (AppInventorScreen screen : screens.values()) { File screenFile = new File(getScreenFilePath(f.getAbsolutePath(), screen)); screenFile.getParentFile().mkdirs(); screenFile.createNewFile(); FileWriter out = new FileWriter(screenFile); String initial = files.get(i).toString(); Map<String, String> types = screen.getTypes(); String[] lines = initial.split("\n"); for (String key : types.keySet()) { if (!key.trim().equals(screen.getName().trim())) { String value = types.get(key); boolean varFound = false; boolean importFound = false; for (String line : lines) { if (line.matches("^\\s*(public|private)\\s+" + value + "\\s+" + key + "\\s*=.*;$")) varFound = true; if (line.matches("^\\s*(public|private)\\s+" + value + "\\s+" + key + "\\s*;$")) varFound = true; if (line.matches("^\\s*import\\s+.*" + value + "\\s*;$")) importFound = true; } if (!varFound) initial = initial.replaceFirst("(?s)(?<=\\{\n)", "\tprivate " + value + " " + key + ";\n"); if (!importFound) initial = initial.replaceFirst("(?=import)", "import com.google.devtools.simple.runtime.components.android." + value + ";\n"); } } out.write(initial); out.close(); i++; } File manifestFile = new File(getManifestFilePath(f.getAbsolutePath(), manifest)); manifestFile.getParentFile().mkdirs(); manifestFile.createNewFile(); FileWriter out = new FileWriter(manifestFile); out.write(manifest.toString()); out.close(); File projectFile = new File(getProjectFilePath(f.getAbsolutePath(), project)); projectFile.getParentFile().mkdirs(); projectFile.createNewFile(); out = new FileWriter(projectFile); out.write(project.toString()); out.close(); String[] copyResourceFilenames = { "proguard.cfg", "project.properties", "libSimpleAndroidRuntime.jar", "\\.classpath", "res/drawable/icon.png", "\\.settings/org.eclipse.jdt.core.prefs" }; for (String copyResourceFilename : copyResourceFilenames) { InputStream is = getClass().getResourceAsStream("/resources/" + copyResourceFilename.replace("\\.", "")); File outputFile = new File(f.getAbsoluteFile() + File.separator + copyResourceFilename.replace("\\.", ".")); outputFile.getParentFile().mkdirs(); OutputStream os = new FileOutputStream(outputFile); byte[] buf = new byte[1024]; int readBytes; if (is == null) System.out.println("/resources/" + copyResourceFilename.replace("\\.", "")); if (os == null) System.out.println(f.getAbsolutePath() + File.separator + copyResourceFilename.replace("\\.", ".")); while ((readBytes = is.read(buf)) > 0) { os.write(buf, 0, readBytes); } } for (String assetName : assets) { InputStream is = new FileInputStream(new File(assetsDir.getAbsolutePath() + File.separator + assetName)); File outputFile = new File(f.getAbsoluteFile() + File.separator + assetName); outputFile.getParentFile().mkdirs(); OutputStream os = new FileOutputStream(outputFile); byte[] buf = new byte[1024]; int readBytes; while ((readBytes = is.read(buf)) > 0) { os.write(buf, 0, readBytes); } } File assetsOutput = new File(getAssetsFilePath(f.getAbsolutePath())); new File(assetsDir.getAbsoluteFile() + File.separator + "assets").renameTo(assetsOutput); } }
00
Code Sample 1: public static String upload_file(String sessionid, String localFilePath, String remoteTagPath) { String jsonstring = "If you see this message, there is some problem inside the function:upload_file()"; String srcPath = localFilePath; String uploadUrl = "https://s2.cloud.cm/rpc/json/?session_id=" + sessionid + "&c=Storage&m=upload_file&tag=" + remoteTagPath; String end = "\r\n"; String twoHyphens = "--"; String boundary = "******"; try { URL url = new URL(uploadUrl); HttpURLConnection httpURLConnection = (HttpURLConnection) url.openConnection(); httpURLConnection.setDoInput(true); httpURLConnection.setDoOutput(true); httpURLConnection.setUseCaches(false); httpURLConnection.setRequestMethod("POST"); httpURLConnection.setRequestProperty("Connection", "Keep-Alive"); httpURLConnection.setRequestProperty("Charset", "UTF-8"); httpURLConnection.setRequestProperty("Content-Type", "multipart/form-data;boundary=" + boundary); DataOutputStream dos = new DataOutputStream(httpURLConnection.getOutputStream()); dos.writeBytes(twoHyphens + boundary + end); dos.writeBytes("Content-Disposition: form-data; name=\"file\"; filename=\"" + srcPath.substring(srcPath.lastIndexOf("/") + 1) + "\"" + end); dos.writeBytes(end); FileInputStream fis = new FileInputStream(srcPath); byte[] buffer = new byte[8192]; int count = 0; while ((count = fis.read(buffer)) != -1) { dos.write(buffer, 0, count); } fis.close(); dos.writeBytes(end); dos.writeBytes(twoHyphens + boundary + twoHyphens + end); dos.flush(); InputStream is = httpURLConnection.getInputStream(); InputStreamReader isr = new InputStreamReader(is, "utf-8"); BufferedReader br = new BufferedReader(isr); jsonstring = br.readLine(); dos.close(); is.close(); return jsonstring; } catch (Exception e) { e.printStackTrace(); } return jsonstring; } Code Sample 2: public static void copyFile(String source, String destination, TimeSlotTracker timeSlotTracker) { LOG.info("copying [" + source + "] to [" + destination + "]"); BufferedInputStream sourceStream = null; BufferedOutputStream destStream = null; try { File destinationFile = new File(destination); if (destinationFile.exists()) { destinationFile.delete(); } sourceStream = new BufferedInputStream(new FileInputStream(source)); destStream = new BufferedOutputStream(new FileOutputStream(destinationFile)); int readByte; while ((readByte = sourceStream.read()) > 0) { destStream.write(readByte); } Object[] arg = { destinationFile.getName() }; String msg = timeSlotTracker.getString("datasource.xml.copyFile.copied", arg); LOG.fine(msg); } catch (Exception e) { Object[] expArgs = { e.getMessage() }; String expMsg = timeSlotTracker.getString("datasource.xml.copyFile.exception", expArgs); timeSlotTracker.errorLog(expMsg); timeSlotTracker.errorLog(e); } finally { try { if (destStream != null) { destStream.close(); } if (sourceStream != null) { sourceStream.close(); } } catch (Exception e) { Object[] expArgs = { e.getMessage() }; String expMsg = timeSlotTracker.getString("datasource.xml.copyFile.exception", expArgs); timeSlotTracker.errorLog(expMsg); timeSlotTracker.errorLog(e); } } }
11
Code Sample 1: @Override public void execute() throws ProcessorExecutionException { try { if (getSource().getPaths() == null || getSource().getPaths().size() == 0 || getDestination().getPaths() == null || getDestination().getPaths().size() == 0) { throw new ProcessorExecutionException("No input and/or output paths specified."); } String temp_dir_prefix = getDestination().getPath().getParent().toString() + "/bcc_" + getDestination().getPath().getName() + "_"; SequenceTempDirMgr dirMgr = new SequenceTempDirMgr(temp_dir_prefix, context); dirMgr.setSeqNum(0); Path tmpDir; System.out.println("++++++>" + dirMgr.getSeqNum() + ": Transform input to AdjSetVertex"); Transformer transformer = new OutAdjVertex2AdjSetVertexTransformer(); transformer.setConf(context); transformer.setSrcPath(getSource().getPath()); tmpDir = dirMgr.getTempDir(); transformer.setDestPath(tmpDir); transformer.setMapperNum(getMapperNum()); transformer.setReducerNum(getReducerNum()); transformer.execute(); System.out.println("++++++>" + dirMgr.getSeqNum() + ": Transform input to LabeledAdjSetVertex"); Vertex2LabeledTransformer l_transformer = new Vertex2LabeledTransformer(); l_transformer.setConf(context); l_transformer.setSrcPath(tmpDir); tmpDir = dirMgr.getTempDir(); l_transformer.setDestPath(tmpDir); l_transformer.setMapperNum(getMapperNum()); l_transformer.setReducerNum(getReducerNum()); l_transformer.setOutputValueClass(LabeledAdjSetVertex.class); l_transformer.execute(); Graph src; Graph dest; Path path_to_remember = tmpDir; System.out.println("++++++>" + dirMgr.getSeqNum() + ": SpanningTreeRootChoose"); src = new Graph(Graph.defaultGraph()); src.setPath(tmpDir); dest = new Graph(Graph.defaultGraph()); tmpDir = dirMgr.getTempDir(); dest.setPath(tmpDir); GraphAlgorithm choose_root = new SpanningTreeRootChoose(); choose_root.setConf(context); choose_root.setSource(src); choose_root.setDestination(dest); choose_root.setMapperNum(getMapperNum()); choose_root.setReducerNum(getReducerNum()); choose_root.execute(); Path the_file = new Path(tmpDir.toString() + "/part-00000"); FileSystem client = FileSystem.get(context); if (!client.exists(the_file)) { throw new ProcessorExecutionException("Did not find the chosen vertex in " + the_file.toString()); } FSDataInputStream input_stream = client.open(the_file); ByteArrayOutputStream output_stream = new ByteArrayOutputStream(); IOUtils.copyBytes(input_stream, output_stream, context, false); String the_line = output_stream.toString(); String root_vertex_id = the_line.substring(SpanningTreeRootChoose.SPANNING_TREE_ROOT.length()).trim(); input_stream.close(); output_stream.close(); System.out.println("++++++> Chosen the root of spanning tree = " + root_vertex_id); while (true) { System.out.println("++++++>" + dirMgr.getSeqNum() + " Generate the spanning tree rooted at : (" + root_vertex_id + ") from " + tmpDir); src = new Graph(Graph.defaultGraph()); src.setPath(path_to_remember); tmpDir = dirMgr.getTempDir(); dest = new Graph(Graph.defaultGraph()); dest.setPath(tmpDir); path_to_remember = tmpDir; GraphAlgorithm spanning = new SpanningTreeGenerate(); spanning.setConf(context); spanning.setSource(src); spanning.setDestination(dest); spanning.setMapperNum(getMapperNum()); spanning.setReducerNum(getReducerNum()); spanning.setParameter(ConstantLabels.ROOT_ID, root_vertex_id); spanning.execute(); System.out.println("++++++>" + dirMgr.getSeqNum() + " Test spanning convergence"); src = new Graph(Graph.defaultGraph()); src.setPath(tmpDir); tmpDir = dirMgr.getTempDir(); dest = new Graph(Graph.defaultGraph()); dest.setPath(tmpDir); GraphAlgorithm conv_tester = new SpanningConvergenceTest(); conv_tester.setConf(context); conv_tester.setSource(src); conv_tester.setDestination(dest); conv_tester.setMapperNum(getMapperNum()); conv_tester.setReducerNum(getReducerNum()); conv_tester.execute(); long vertexes_out_of_tree = MRConsoleReader.getMapOutputRecordNum(conv_tester.getFinalStatus()); System.out.println("++++++> number of vertexes out of the spanning tree = " + vertexes_out_of_tree); if (vertexes_out_of_tree == 0) { break; } } System.out.println("++++++> From spanning tree to sets of edges"); src = new Graph(Graph.defaultGraph()); src.setPath(path_to_remember); tmpDir = dirMgr.getTempDir(); dest = new Graph(Graph.defaultGraph()); dest.setPath(tmpDir); GraphAlgorithm tree2set = new Tree2EdgeSet(); tree2set.setConf(context); tree2set.setSource(src); tree2set.setDestination(dest); tree2set.setMapperNum(getMapperNum()); tree2set.setReducerNum(getReducerNum()); tree2set.execute(); long map_input_records_num = -1; long map_output_records_num = -2; Stack<Path> expanding_stack = new Stack<Path>(); do { System.out.println("++++++>" + dirMgr.getSeqNum() + ": EdgeSetMinorJoin"); GraphAlgorithm minorjoin = new EdgeSetMinorJoin(); minorjoin.setConf(context); src = new Graph(Graph.defaultGraph()); src.setPath(tmpDir); dest = new Graph(Graph.defaultGraph()); tmpDir = dirMgr.getTempDir(); dest.setPath(tmpDir); minorjoin.setSource(src); minorjoin.setDestination(dest); minorjoin.setMapperNum(getMapperNum()); minorjoin.setReducerNum(getReducerNum()); minorjoin.execute(); expanding_stack.push(tmpDir); System.out.println("++++++>" + dirMgr.getSeqNum() + ": EdgeSetJoin"); GraphAlgorithm join = new EdgeSetJoin(); join.setConf(context); src = new Graph(Graph.defaultGraph()); src.setPath(tmpDir); dest = new Graph(Graph.defaultGraph()); tmpDir = dirMgr.getTempDir(); dest.setPath(tmpDir); join.setSource(src); join.setDestination(dest); join.setMapperNum(getMapperNum()); join.setReducerNum(getReducerNum()); join.execute(); map_input_records_num = MRConsoleReader.getMapInputRecordNum(join.getFinalStatus()); map_output_records_num = MRConsoleReader.getMapOutputRecordNum(join.getFinalStatus()); System.out.println("++++++> map in/out : " + map_input_records_num + "/" + map_output_records_num); } while (map_input_records_num != map_output_records_num); while (expanding_stack.size() > 0) { System.out.println("++++++>" + dirMgr.getSeqNum() + ": EdgeSetExpand"); GraphAlgorithm expand = new EdgeSetExpand(); expand.setConf(context); src = new Graph(Graph.defaultGraph()); src.addPath(expanding_stack.pop()); src.addPath(tmpDir); dest = new Graph(Graph.defaultGraph()); tmpDir = dirMgr.getTempDir(); dest.setPath(tmpDir); expand.setSource(src); expand.setDestination(dest); expand.setMapperNum(getMapperNum()); expand.setReducerNum(getReducerNum()); expand.execute(); System.out.println("++++++>" + dirMgr.getSeqNum() + ": EdgeSetMinorExpand"); GraphAlgorithm minorexpand = new EdgeSetMinorExpand(); minorexpand.setConf(context); src = new Graph(Graph.defaultGraph()); src.setPath(tmpDir); dest = new Graph(Graph.defaultGraph()); tmpDir = dirMgr.getTempDir(); dest.setPath(tmpDir); minorexpand.setSource(src); minorexpand.setDestination(dest); minorexpand.setMapperNum(getMapperNum()); minorexpand.setReducerNum(getReducerNum()); minorexpand.execute(); } System.out.println("++++++>" + dirMgr.getSeqNum() + ": EdgeSetSummarize"); GraphAlgorithm summarize = new EdgeSetSummarize(); summarize.setConf(context); src = new Graph(Graph.defaultGraph()); src.setPath(tmpDir); dest = new Graph(Graph.defaultGraph()); dest.setPath(getDestination().getPath()); summarize.setSource(src); summarize.setDestination(dest); summarize.setMapperNum(getMapperNum()); summarize.setReducerNum(getReducerNum()); summarize.execute(); dirMgr.deleteAll(); } catch (IOException e) { throw new ProcessorExecutionException(e); } catch (IllegalAccessException e) { throw new ProcessorExecutionException(e); } } Code Sample 2: public void testCreateNewXMLFile() throws InvalidNodeTypeDefException, ParseException, Exception { JCRNodeSource emptySource = loadTestSource(); assertEquals(false, emptySource.exists()); OutputStream sourceOut = emptySource.getOutputStream(); assertNotNull(sourceOut); InputStream contentIn = getClass().getResourceAsStream(CONTENT_FILE); try { IOUtils.copy(contentIn, sourceOut); sourceOut.flush(); } finally { sourceOut.close(); contentIn.close(); } InputStream expected = getClass().getResourceAsStream(CONTENT_FILE); JCRNodeSource persistentSource = loadTestSource(); assertEquals(true, persistentSource.exists()); InputStream actual = persistentSource.getInputStream(); try { assertTrue(isXmlEqual(expected, actual)); } finally { expected.close(); actual.close(); } JCRNodeSource tmpSrc = (JCRNodeSource) resolveSource(BASE_URL + "users/alexander.saar"); persistentSource.delete(); tmpSrc.delete(); }
00
Code Sample 1: private void updateService(int nodeID, String interfaceIP, int serviceID, String notifyFlag) throws ServletException { Connection connection = null; final DBUtils d = new DBUtils(getClass()); try { connection = Vault.getDbConnection(); d.watch(connection); PreparedStatement stmt = connection.prepareStatement(UPDATE_SERVICE); d.watch(stmt); stmt.setString(1, notifyFlag); stmt.setInt(2, nodeID); stmt.setString(3, interfaceIP); stmt.setInt(4, serviceID); stmt.executeUpdate(); } catch (SQLException e) { try { connection.rollback(); } catch (SQLException sqlEx) { throw new ServletException("Couldn't roll back update to service " + serviceID + " on interface " + interfaceIP + " notify as " + notifyFlag + " in the database.", sqlEx); } throw new ServletException("Error when updating to service " + serviceID + " on interface " + interfaceIP + " notify as " + notifyFlag + " in the database.", e); } finally { d.cleanUp(); } } Code Sample 2: public static String getDigest(String input) throws NoSuchAlgorithmException { MessageDigest md5 = MessageDigest.getInstance("MD5"); md5.update(input.getBytes()); byte[] outDigest = md5.digest(); StringBuffer outBuf = new StringBuffer(33); for (int i = 0; i < outDigest.length; i++) { byte b = outDigest[i]; int hi = (b >> 4) & 0x0f; outBuf.append(MD5Digest.hexTab[hi]); int lo = b & 0x0f; outBuf.append(MD5Digest.hexTab[lo]); } return outBuf.toString(); }
00
Code Sample 1: public void run() { FileInputStream src; FileOutputStream dest; try { dest = new FileOutputStream(srcName); } catch (FileNotFoundException e) { e.printStackTrace(); return; } FileChannel destC = dest.getChannel(); FileChannel srcC; ByteBuffer buf = ByteBuffer.allocateDirect(BUFFER_SIZE); try { int fileNo = 0; while (true) { int i = 1; String destName = srcName + "_" + fileNo; src = new FileInputStream(destName); srcC = src.getChannel(); while ((i > 0)) { i = srcC.read(buf); buf.flip(); destC.write(buf); buf.compact(); } srcC.close(); src.close(); fileNo++; } } catch (IOException e1) { e1.printStackTrace(); return; } } Code Sample 2: JSONResponse execute() throws ServerException, RtmApiException, IOException { HttpClient httpclient = new DefaultHttpClient(); URI uri; try { uri = new URI(this.request.getUrl()); HttpPost httppost = new HttpPost(uri); HttpResponse response = httpclient.execute(httppost); InputStream is = response.getEntity().getContent(); try { StringBuilder sb = new StringBuilder(); BufferedReader r = new BufferedReader(new InputStreamReader(new DoneHandlerInputStream(is))); for (String line = r.readLine(); line != null; line = r.readLine()) { sb.append(line); } return new JSONResponse(sb.toString()); } finally { is.close(); } } catch (URISyntaxException e) { throw new RtmApiException(e.getMessage()); } catch (ClientProtocolException e) { throw new RtmApiException(e.getMessage()); } }
11
Code Sample 1: public static void generate(final InputStream input, String format, Point dimension, IPath outputLocation) throws CoreException { MultiStatus status = new MultiStatus(GraphVizActivator.ID, 0, "Errors occurred while running Graphviz", null); File dotInput = null, dotOutput = outputLocation.toFile(); ByteArrayOutputStream dotContents = new ByteArrayOutputStream(); try { dotInput = File.createTempFile(TMP_FILE_PREFIX, DOT_EXTENSION); FileOutputStream tmpDotOutputStream = null; try { IOUtils.copy(input, dotContents); tmpDotOutputStream = new FileOutputStream(dotInput); IOUtils.copy(new ByteArrayInputStream(dotContents.toByteArray()), tmpDotOutputStream); } finally { IOUtils.closeQuietly(tmpDotOutputStream); } IStatus result = runDot(format, dimension, dotInput, dotOutput); if (dotOutput.isFile()) { if (!result.isOK() && Platform.inDebugMode()) LogUtils.log(status); return; } } catch (IOException e) { status.add(new Status(IStatus.ERROR, GraphVizActivator.ID, "", e)); } finally { dotInput.delete(); IOUtils.closeQuietly(input); } throw new CoreException(status); } Code Sample 2: public void transport(File file) throws TransportException { if (file.exists()) { if (file.isDirectory()) { File[] files = file.listFiles(); for (int i = 0; i < files.length; i++) { transport(file); } } else if (file.isFile()) { try { FileChannel inChannel = new FileInputStream(file).getChannel(); FileChannel outChannel = new FileOutputStream(getOption("destination")).getChannel(); inChannel.transferTo(0, inChannel.size(), outChannel); } catch (IOException e) { log.error("File transfer failed", e); } } } }