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Code Sample 1:
public static java.io.ByteArrayOutputStream getFileByteStream(URL _url) { java.io.ByteArrayOutputStream buffer = new java.io.ByteArrayOutputStream(); try { InputStream input = _url.openStream(); IOUtils.copy(input, buffer); IOUtils.closeQuietly(input); } catch (Exception err) { throw new RuntimeException(err); } return buffer; }
Code Sample 2:
static String fetchURLComposeExternPackageList(String urlpath, String pkglisturlpath) { String link = pkglisturlpath + "package-list"; try { boolean relative = isRelativePath(urlpath); readPackageList((new URL(link)).openStream(), urlpath, relative); } catch (MalformedURLException exc) { return getText("doclet.MalformedURL", link); } catch (IOException exc) { return getText("doclet.URL_error", link); } return null; }
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Code Sample 1:
private void getRandomGUID(boolean secure) { MessageDigest md5 = null; StringBuffer sbValueBeforeMD5 = new StringBuffer(); try { md5 = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException e) { logger.debug("Random GUID error: " + e.getMessage()); } try { long time = System.currentTimeMillis(); long rand = 0; if (secure) { rand = mySecureRand.nextLong(); } else { rand = myRand.nextLong(); } sbValueBeforeMD5.append(s_id); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(time)); sbValueBeforeMD5.append(":"); sbValueBeforeMD5.append(Long.toString(rand)); valueBeforeMD5 = sbValueBeforeMD5.toString(); md5.update(valueBeforeMD5.getBytes()); byte[] array = md5.digest(); StringBuffer sb = new StringBuffer(); for (int j = 0; j < array.length; ++j) { int b = array[j] & 0xFF; if (b < 0x10) sb.append('0'); sb.append(Integer.toHexString(b)); } valueAfterMD5 = sb.toString(); } catch (Exception e) { System.out.println("Error:" + e); } }
Code Sample 2:
public static String getDigest(String input) throws NoSuchAlgorithmException { MessageDigest md5 = MessageDigest.getInstance("MD5"); md5.update(input.getBytes()); byte[] outDigest = md5.digest(); StringBuffer outBuf = new StringBuffer(33); for (int i = 0; i < outDigest.length; i++) { byte b = outDigest[i]; int hi = (b >> 4) & 0x0f; outBuf.append(MD5Digest.hexTab[hi]); int lo = b & 0x0f; outBuf.append(MD5Digest.hexTab[lo]); } return outBuf.toString(); }
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Code Sample 1:
public void convert(String newDocumentName, URL url) throws IOException { documentPath = createDirectoryStructure(this.destinationPath, newDocumentName); try { Document doc = builder.build(url.openStream()); Element elementx = doc.getRootElement(); convertElement(elementx); System.out.println("\n\n"); XMLOutputter outp = new XMLOutputter(Format.getPrettyFormat()); System.out.println("as file: " + url.getFile()); File inputFile = new File(url.getFile()); File outputFile = new File(documentPath, renameFileExtention(inputFile, "-remaining.xml")); System.out.println("outputFile: " + outputFile); outp.output(doc, new FileOutputStream(outputFile)); } catch (JDOMException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } }
Code Sample 2:
public void add(final String name, final String content) { forBundle(new BundleManipulator() { public boolean includeEntry(String entryName) { return !name.equals(entryName); } public void finish(Bundle bundle, ZipOutputStream zout) throws IOException { zout.putNextEntry(new ZipEntry(name)); IOUtils.copy(new StringReader(content), zout, "UTF-8"); } }); }
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Code Sample 1:
private String getAuthCookie(boolean invalidate) { if (resources.getBoolean(R.bool.dev)) { return "dev_appserver_login=get_view@localhost.devel:false:18580476422013912411"; } else { try { Account[] accounts = accountsManager.getAccountsByType("com.google"); Account account = null; while (!(accounts.length > 0)) { accountsManager.addAccount("com.google", "ah", null, null, act, null, null).getResult(); accounts = accountsManager.getAccountsByType("com.google"); } if (account == null) { account = accounts[0]; } String authToken = accountsManager.getAuthToken(account, "ah", null, act, null, null).getResult().get(AccountManager.KEY_AUTHTOKEN).toString(); if (invalidate || authToken == null) { Logger.getLogger(JSBridge.class.getName()).log(Level.INFO, "Invalidating auth token."); accountsManager.invalidateAuthToken("com.google", authToken); return getAuthCookie(false); } HttpGet httpget = new HttpGet("http://" + resources.getString(R.string.host) + "/_ah/login?auth=" + authToken); HttpResponse response = httpclient.execute(httpget); for (Header c : response.getHeaders("Set-Cookie")) { if (c.getValue().startsWith("ACSID=")) { return c.getValue(); } } return getAuthCookie(false); } catch (ClientProtocolException e) { Logger.getLogger(JSBridge.class.getName()).log(Level.SEVERE, "HTTP protocol violated.", e); } catch (OperationCanceledException e) { Logger.getLogger(JSBridge.class.getName()).log(Level.WARNING, "Login canceled.", e); } catch (AuthenticatorException e) { Logger.getLogger(JSBridge.class.getName()).log(Level.WARNING, "Authentication failed.", e); } catch (IOException e) { Logger.getLogger(JSBridge.class.getName()).log(Level.SEVERE, "Login failed.", e); } return getAuthCookie(true); } }
Code Sample 2:
private void getLocationAddressByGoogleMapAsync(Location location) { if (location == null) { return; } AsyncTask<Location, Void, String> task = new AsyncTask<Location, Void, String>() { @Override protected String doInBackground(Location... params) { if (params == null || params.length == 0 || params[0] == null) { return null; } Location location = params[0]; String address = ""; String cachedAddress = DataService.GetInstance(mContext).getAddressFormLocationCache(location.getLatitude(), location.getLongitude()); if (!TextUtils.isEmpty(cachedAddress)) { address = cachedAddress; } else { StringBuilder jsonText = new StringBuilder(); HttpClient client = new DefaultHttpClient(); String url = String.format(GoogleMapAPITemplate, location.getLatitude(), location.getLongitude()); HttpGet httpGet = new HttpGet(url); try { HttpResponse response = client.execute(httpGet); StatusLine statusLine = response.getStatusLine(); int statusCode = statusLine.getStatusCode(); if (statusCode == 200) { HttpEntity entity = response.getEntity(); InputStream content = entity.getContent(); BufferedReader reader = new BufferedReader(new InputStreamReader(content)); String line; while ((line = reader.readLine()) != null) { jsonText.append(line); } JSONObject result = new JSONObject(jsonText.toString()); String status = result.getString(GoogleMapStatusSchema.status); if (GoogleMapStatusCodes.OK.equals(status)) { JSONArray addresses = result.getJSONArray(GoogleMapStatusSchema.results); if (addresses.length() > 0) { address = addresses.getJSONObject(0).getString(GoogleMapStatusSchema.formatted_address); if (!TextUtils.isEmpty(currentBestLocationAddress)) { DataService.GetInstance(mContext).updateAddressToLocationCache(location.getLatitude(), location.getLongitude(), currentBestLocationAddress); } } } } else { Log.e("Error", "Failed to get address via google map API."); } } catch (ClientProtocolException e) { e.printStackTrace(); Toast.makeText(mContext, "Failed to get location.", Toast.LENGTH_SHORT).show(); } catch (IOException e) { Toast.makeText(mContext, "Failed to get location.", Toast.LENGTH_SHORT).show(); } catch (JSONException e) { Toast.makeText(mContext, "Failed to get location.", Toast.LENGTH_SHORT).show(); } } return address; } @Override protected void onPostExecute(String result) { setCurrentBestLocationAddress(currentBestLocation, result); } }; task.execute(currentBestLocation); }
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Code Sample 1:
public static void copyFile(File srcFile, File dstFile) { logger.info("Create file : " + dstFile.getPath()); try { FileChannel srcChannel = new FileInputStream(srcFile).getChannel(); FileChannel dstChannel = new FileOutputStream(dstFile).getChannel(); dstChannel.transferFrom(srcChannel, 0, srcChannel.size()); srcChannel.close(); dstChannel.close(); } catch (IOException e) { e.printStackTrace(); } }
Code Sample 2:
private File uploadToTmp() { if (fileFileName == null) { return null; } File tmpFile = dataDir.tmpFile(shortname, fileFileName); log.debug("Uploading dwc archive file for new resource " + shortname + " to " + tmpFile.getAbsolutePath()); InputStream input = null; OutputStream output = null; try { input = new FileInputStream(file); output = new FileOutputStream(tmpFile); IOUtils.copy(input, output); output.flush(); log.debug("Uploaded file " + fileFileName + " with content-type " + fileContentType); } catch (IOException e) { log.error(e); return null; } finally { if (output != null) { IOUtils.closeQuietly(output); } if (input != null) { IOUtils.closeQuietly(input); } } return tmpFile; }
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Code Sample 1:
@Override public void execute() throws BuildException { final String GC_USERNAME = "google-code-username"; final String GC_PASSWORD = "google-code-password"; if (StringUtils.isBlank(this.projectName)) throw new BuildException("undefined project"); if (this.file == null) throw new BuildException("undefined file"); if (!this.file.exists()) throw new BuildException("file not found :" + file); if (!this.file.isFile()) throw new BuildException("not a file :" + file); if (this.config == null) throw new BuildException("undefined config"); if (!this.config.exists()) throw new BuildException("file not found :" + config); if (!this.config.isFile()) throw new BuildException("not a file :" + config); PostMethod post = null; try { Properties cfg = new Properties(); FileInputStream fin = new FileInputStream(this.config); cfg.loadFromXML(fin); fin.close(); if (!cfg.containsKey(GC_USERNAME)) throw new BuildException("undefined " + GC_USERNAME + " in " + this.config); if (!cfg.containsKey(GC_PASSWORD)) throw new BuildException("undefined " + GC_PASSWORD + " in " + this.config); HttpClient client = new HttpClient(); post = new PostMethod("https://" + projectName + ".googlecode.com/files"); post.addRequestHeader("User-Agent", getClass().getName()); post.addRequestHeader("Authorization", "Basic " + Base64.encode(cfg.getProperty(GC_USERNAME) + ":" + cfg.getProperty(GC_PASSWORD))); List<Part> parts = new ArrayList<Part>(); String s = this.summary; if (StringUtils.isBlank(s)) { s = this.file.getName() + " (" + TimeUtils.toYYYYMMDD() + ")"; } parts.add(new StringPart("summary", s)); for (String lbl : this.labels.split("[, \t\n]+")) { if (StringUtils.isBlank(lbl)) continue; parts.add(new StringPart("label", lbl.trim())); } parts.add(new FilePart("filename", this.file)); MultipartRequestEntity requestEntity = new MultipartRequestEntity(parts.toArray(new Part[parts.size()]), post.getParams()); post.setRequestEntity(requestEntity); int status = client.executeMethod(post); if (status != 201) { throw new BuildException("http status !=201 : " + post.getResponseBodyAsString()); } else { IOUtils.copyTo(post.getResponseBodyAsStream(), new NullOutputStream()); } } catch (BuildException e) { throw e; } catch (Exception e) { throw new BuildException(e); } finally { if (post != null) post.releaseConnection(); } }
Code Sample 2:
public boolean chequearMarca(int a, int m, int d) { boolean existe = false; try { cantidadArchivos = obtenerCantidad() + 1; String filenametxt = ""; String filenamezip = ""; int dia = 0; int mes = 0; int ano = 0; for (int i = 1; i < cantidadArchivos; i++) { filenamezip = "recordatorio" + i + ".zip"; filenametxt = "recordatorio" + i + ".txt"; BufferedOutputStream dest = null; BufferedInputStream is = null; ZipEntry entry; ZipFile zipfile = new ZipFile(filenamezip); Enumeration e = zipfile.entries(); while (e.hasMoreElements()) { entry = (ZipEntry) e.nextElement(); is = new BufferedInputStream(zipfile.getInputStream(entry)); int count; byte data[] = new byte[buffer]; FileOutputStream fos = new FileOutputStream(entry.getName()); dest = new BufferedOutputStream(fos, buffer); while ((count = is.read(data, 0, buffer)) != -1) dest.write(data, 0, count); dest.flush(); dest.close(); is.close(); } DataInputStream input = new DataInputStream(new FileInputStream(filenametxt)); dia = Integer.parseInt(input.readLine()); mes = Integer.parseInt(input.readLine()); ano = Integer.parseInt(input.readLine()); if (ano == a && mes == m && dia == d) existe = true; input.close(); } } catch (Exception e) { JOptionPane.showMessageDialog(null, "Error en: " + e.toString(), "Error", JOptionPane.ERROR_MESSAGE); } return (existe); }
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Code Sample 1:
private String getXML(String url) throws ClientProtocolException, IOException { HttpClient client = new DefaultHttpClient(); HttpGet get = new HttpGet(url); HttpResponse responseGet = client.execute(get); HttpEntity resEntityGet = responseGet.getEntity(); BufferedReader in = new BufferedReader(new InputStreamReader(resEntityGet.getContent())); StringBuffer sb = new StringBuffer(""); String line = ""; String NL = System.getProperty("line.separator"); while ((line = in.readLine()) != null) { sb.append(line + NL); } in.close(); String xml = sb.toString(); return xml; }
Code Sample 2:
public static byte[] downloadHttpFile(String url) throws IOException { HttpURLConnection conn = (HttpURLConnection) new URL(url).openConnection(); int responseCode = conn.getResponseCode(); if (responseCode != HttpURLConnection.HTTP_OK) throw new IOException("Invalid HTTP response: " + responseCode + " for url " + conn.getURL()); InputStream in = conn.getInputStream(); try { return Utilities.getInputBytes(in); } finally { in.close(); } }
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Code Sample 1:
public static String getTextFromUrl(final String url) throws IOException { final String lineSeparator = System.getProperty("line.separator"); InputStreamReader inputStreamReader = null; BufferedReader bufferedReader = null; try { final StringBuilder result = new StringBuilder(); inputStreamReader = new InputStreamReader(new URL(url).openStream()); bufferedReader = new BufferedReader(inputStreamReader); String line; while ((line = bufferedReader.readLine()) != null) { result.append(line).append(lineSeparator); } return result.toString(); } finally { InputOutputUtil.close(bufferedReader, inputStreamReader); } }
Code Sample 2:
public static void main(String[] args) { URL url = Thread.currentThread().getContextClassLoader().getResource("org/jeditor/resources/jeditor.properties"); try { PropertyResourceBundle prb = new PropertyResourceBundle(url.openStream()); String version = prb.getString("version"); String date = prb.getString("date"); System.out.println("jEditor version " + version + " build on " + date); System.out.println("Distributed under GPL license"); } catch (IOException ex) { ex.printStackTrace(); } }
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Code Sample 1:
@Override public boolean accept(File file) { if (file.getName().equals(".svn")) { return false; } final long modify = file.lastModified(); final long time = DateUtils.toDate("2012-03-21 17:43", "yyyy-MM-dd HH:mm").getTime(); if (modify >= time) { if (file.isFile()) { File f = new File(StringsUtils.replace(file.getAbsolutePath(), filePath2, filePath1)); f.getParentFile().mkdirs(); try { IOUtils.copyFile(file, f); } catch (IOException e) { e.printStackTrace(); } System.out.println(f.getName()); } } return true; }
Code Sample 2:
private boolean exportPKC(String keystoreLocation, String pw) { boolean created = false; KeyStore ks = null; try { ks = KeyStore.getInstance(KeyStore.getDefaultType()); ks.load(new BufferedInputStream(new FileInputStream(keystoreLocation)), pw.toCharArray()); } catch (Exception e) { if (this.debugLevel >= SAWSConstant.ErrorInfo) { this.sawsDebugLog.write("Error reading keystore file when exporting PKC: " + e.getMessage()); } return false; } Certificate cert = null; try { cert = ks.getCertificate("saws"); } catch (KeyStoreException e) { if (this.debugLevel >= SAWSConstant.ErrorInfo) { this.sawsDebugLog.write("Error reading certificate from keystore file when exporting PKC: " + e.getMessage()); } return false; } try { StringBuffer sb = new StringBuffer("-----BEGIN CERTIFICATE-----\n"); sb.append(new String(Base64.encode(cert.getEncoded()))); sb.append("\n-----END CERTIFICATE-----\n"); OutputStreamWriter wr = new OutputStreamWriter(new FileOutputStream("sawsSigningPKC.crt")); wr.write(new String(sb)); wr.flush(); wr.close(); created = true; } catch (Exception e) { if (this.debugLevel >= SAWSConstant.ErrorInfo) { this.sawsDebugLog.write("Error exporting PKC file: " + e.getMessage()); } return false; } return created; }
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Code Sample 1:
public long copyDirAllFilesToDirectory(String baseDirStr, String destDirStr) throws Exception { long plussQuotaSize = 0; if (baseDirStr.endsWith(sep)) { baseDirStr = baseDirStr.substring(0, baseDirStr.length() - 1); } if (destDirStr.endsWith(sep)) { destDirStr = destDirStr.substring(0, destDirStr.length() - 1); } FileUtils.getInstance().createDirectory(destDirStr); BufferedInputStream in = null; BufferedOutputStream out = null; byte dataBuff[] = new byte[bufferSize]; File baseDir = new File(baseDirStr); baseDir.mkdirs(); if (!baseDir.exists()) { createDirectory(baseDirStr); } if ((baseDir.exists()) && (baseDir.isDirectory())) { String[] entryList = baseDir.list(); if (entryList.length > 0) { for (int pos = 0; pos < entryList.length; pos++) { String entryName = entryList[pos]; String oldPathFileName = baseDirStr + sep + entryName; File entryFile = new File(oldPathFileName); if (entryFile.isFile()) { String newPathFileName = destDirStr + sep + entryName; File newFile = new File(newPathFileName); if (newFile.exists()) { plussQuotaSize -= newFile.length(); newFile.delete(); } in = new BufferedInputStream(new FileInputStream(oldPathFileName), bufferSize); out = new BufferedOutputStream(new FileOutputStream(newPathFileName), bufferSize); int readLen; while ((readLen = in.read(dataBuff)) > 0) { out.write(dataBuff, 0, readLen); plussQuotaSize += readLen; } out.flush(); in.close(); out.close(); } } } } else { throw new Exception("Base dir not exist ! baseDirStr = (" + baseDirStr + ")"); } return plussQuotaSize; }
Code Sample 2:
public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFormat.ACRNEMA_STREAM) { System.out.println("\n" + src + ": not an ACRNEMA stream!"); return; } p.parseDcmFile(format, Tags.PixelData); if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) { System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert"); return; } boolean hasPixelData = p.getReadTag() == Tags.PixelData; boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12; int pxlen = p.getReadLength(); if (hasPixelData) { if (inflate) { ds.putUS(Tags.BitsAllocated, 16); pxlen = pxlen * 4 / 3; } if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) { System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert"); return; } } ds.putUI(Tags.StudyInstanceUID, uid(studyUID)); ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID)); ds.putUI(Tags.SOPInstanceUID, uid(instUID)); ds.putUI(Tags.SOPClassUID, classUID); if (!ds.contains(Tags.NumberOfSamples)) { ds.putUS(Tags.NumberOfSamples, 1); } if (!ds.contains(Tags.PhotometricInterpretation)) { ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2"); } if (fmi) { ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian)); } OutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); try { } finally { ds.writeFile(out, encodeParam()); if (hasPixelData) { if (!skipGroupLen) { out.write(PXDATA_GROUPLEN); int grlen = pxlen + 8; out.write((byte) grlen); out.write((byte) (grlen >> 8)); out.write((byte) (grlen >> 16)); out.write((byte) (grlen >> 24)); } out.write(PXDATA_TAG); out.write((byte) pxlen); out.write((byte) (pxlen >> 8)); out.write((byte) (pxlen >> 16)); out.write((byte) (pxlen >> 24)); } if (inflate) { int b2, b3; for (; pxlen > 0; pxlen -= 3) { out.write(in.read()); b2 = in.read(); b3 = in.read(); out.write(b2 & 0x0f); out.write(b2 >> 4 | ((b3 & 0x0f) << 4)); out.write(b3 >> 4); } } else { for (; pxlen > 0; --pxlen) { out.write(in.read()); } } out.close(); } System.out.print('.'); } finally { in.close(); } }
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Code Sample 1:
public static int proxy(java.net.URI uri, HttpServletRequest req, HttpServletResponse res) throws IOException { final HostConfiguration hostConfig = new HostConfiguration(); hostConfig.setHost(uri.getHost()); HttpMethodBase httpMethod = null; if (HttpRpcServer.METHOD_GET.equalsIgnoreCase(req.getMethod())) { httpMethod = new GetMethod(uri.toString()); httpMethod.setFollowRedirects(true); } else if (HttpRpcServer.METHOD_POST.equalsIgnoreCase(req.getMethod())) { httpMethod = new PostMethod(uri.toString()); final Enumeration parameterNames = req.getParameterNames(); if (parameterNames != null) while (parameterNames.hasMoreElements()) { final String parameterName = (String) parameterNames.nextElement(); for (String parameterValue : req.getParameterValues(parameterName)) ((PostMethod) httpMethod).addParameter(parameterName, parameterValue); } ((PostMethod) httpMethod).setRequestEntity(new InputStreamRequestEntity(req.getInputStream())); } if (httpMethod == null) throw new IllegalArgumentException("Unsupported http request method"); final int responseCode; final Enumeration headers = req.getHeaderNames(); if (headers != null) while (headers.hasMoreElements()) { final String headerName = (String) headers.nextElement(); final Enumeration headerValues = req.getHeaders(headerName); while (headerValues.hasMoreElements()) { httpMethod.setRequestHeader(headerName, (String) headerValues.nextElement()); } } final HttpState httpState = new HttpState(); if (req.getCookies() != null) for (Cookie cookie : req.getCookies()) { String host = req.getHeader("Host"); if (StringUtils.isEmpty(cookie.getDomain())) cookie.setDomain(StringUtils.isEmpty(host) ? req.getServerName() + ":" + req.getServerPort() : host); if (StringUtils.isEmpty(cookie.getPath())) cookie.setPath("/"); httpState.addCookie(new org.apache.commons.httpclient.Cookie(cookie.getDomain(), cookie.getName(), cookie.getValue(), cookie.getPath(), cookie.getMaxAge(), cookie.getSecure())); } httpMethod.setQueryString(req.getQueryString()); responseCode = (new HttpClient()).executeMethod(hostConfig, httpMethod, httpState); if (responseCode < 0) { httpMethod.releaseConnection(); return responseCode; } if (httpMethod.getResponseHeaders() != null) for (Header header : httpMethod.getResponseHeaders()) res.setHeader(header.getName(), header.getValue()); final InputStream in = httpMethod.getResponseBodyAsStream(); final OutputStream out = res.getOutputStream(); IOUtils.copy(in, out); out.flush(); out.close(); in.close(); httpMethod.releaseConnection(); return responseCode; }
Code Sample 2:
public static boolean copyFile(File sourceFile, File destinationFile) { boolean copySuccessfull = false; FileChannel source = null; FileChannel destination = null; try { source = new FileInputStream(sourceFile).getChannel(); destination = new FileOutputStream(destinationFile).getChannel(); long transferedBytes = destination.transferFrom(source, 0, source.size()); copySuccessfull = transferedBytes == source.size() ? true : false; } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } finally { if (source != null) { try { source.close(); } catch (IOException e) { e.printStackTrace(); } } if (destination != null) { try { destination.close(); } catch (IOException e) { e.printStackTrace(); } } } return copySuccessfull; }
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Code Sample 1:
@Override public InputStream getInputStream() throws IOException { if (dfos == null) { int deferredOutputStreamThreshold = Config.getInstance().getDeferredOutputStreamThreshold(); dfos = new DeferredFileOutputStream(deferredOutputStreamThreshold, Definitions.PROJECT_NAME, "." + Definitions.TMP_EXTENSION); try { IOUtils.copy(is, dfos); } finally { dfos.close(); } } return dfos.getDeferredInputStream(); }
Code Sample 2:
public void actualizar() throws SQLException, ClassNotFoundException, Exception { Connection conn = null; PreparedStatement ms = null; registroActualizado = false; try { conn = ToolsBD.getConn(); conn.setAutoCommit(false); Date fechaSystem = new Date(); DateFormat aaaammdd = new SimpleDateFormat("yyyyMMdd"); int fzafsis = Integer.parseInt(aaaammdd.format(fechaSystem)); DateFormat hhmmss = new SimpleDateFormat("HHmmss"); DateFormat sss = new SimpleDateFormat("S"); String ss = sss.format(fechaSystem); if (ss.length() > 2) { ss = ss.substring(0, 2); } int fzahsis = Integer.parseInt(hhmmss.format(fechaSystem) + ss); ms = conn.prepareStatement(SENTENCIA_UPDATE); if (fechaOficio != null && !fechaOficio.equals("")) { if (fechaOficio.matches("\\d{8}")) { ms.setInt(1, Integer.parseInt(fechaOficio)); } else { int fzafent = 0; try { fechaTest = dateF.parse(fechaOficio); Calendar cal = Calendar.getInstance(); cal.setTime(fechaTest); DateFormat date1 = new SimpleDateFormat("yyyyMMdd"); fzafent = Integer.parseInt(date1.format(fechaTest)); } catch (Exception e) { } ms.setInt(1, fzafent); } } else { ms.setInt(1, 0); } ms.setString(2, descripcion); ms.setInt(3, Integer.parseInt(anoSalida)); ms.setInt(4, Integer.parseInt(oficinaSalida)); ms.setInt(5, Integer.parseInt(numeroSalida)); ms.setString(6, nulo); ms.setString(7, motivosNulo); ms.setString(8, usuarioNulo); if (fechaNulo != null && !fechaNulo.equals("")) { int fzafent = 0; try { fechaTest = dateF.parse(fechaNulo); Calendar cal = Calendar.getInstance(); cal.setTime(fechaTest); DateFormat date1 = new SimpleDateFormat("yyyyMMdd"); fzafent = Integer.parseInt(date1.format(fechaTest)); } catch (Exception e) { } ms.setInt(9, fzafent); } else { ms.setInt(9, 0); } if (fechaEntrada != null && !fechaEntrada.equals("")) { int fzafent = 0; try { fechaTest = dateF.parse(fechaEntrada); Calendar cal = Calendar.getInstance(); cal.setTime(fechaTest); DateFormat date1 = new SimpleDateFormat("yyyyMMdd"); fzafent = Integer.parseInt(date1.format(fechaTest)); } catch (Exception e) { } ms.setInt(10, fzafent); } else { ms.setInt(10, 0); } ms.setString(11, descartadoEntrada); ms.setString(12, usuarioEntrada); ms.setString(13, motivosDescarteEntrada); ms.setInt(14, anoEntrada != null ? Integer.parseInt(anoEntrada) : 0); ms.setInt(15, oficinaEntrada != null ? Integer.parseInt(oficinaEntrada) : 0); ms.setInt(16, numeroEntrada != null ? Integer.parseInt(numeroEntrada) : 0); ms.setInt(17, anoOficio != null ? Integer.parseInt(anoOficio) : 0); ms.setInt(18, oficinaOficio != null ? Integer.parseInt(oficinaOficio) : 0); ms.setInt(19, numeroOficio != null ? Integer.parseInt(numeroOficio) : 0); int afectados = ms.executeUpdate(); if (afectados > 0) { registroActualizado = true; } else { registroActualizado = false; } conn.commit(); } catch (Exception ex) { System.out.println("Error inesperat, no s'ha desat el registre: " + ex.getMessage()); ex.printStackTrace(); registroActualizado = false; errores.put("", "Error inesperat, no s'ha desat el registre" + ": " + ex.getClass() + "->" + ex.getMessage()); try { if (conn != null) conn.rollback(); } catch (SQLException sqle) { throw new RemoteException("S'ha produït un error i no s'han pogut tornar enrere els canvis efectuats", sqle); } throw new RemoteException("Error inesperat, no s'ha actualitzat la taula de gestió dels ofici de remissió.", ex); } finally { ToolsBD.closeConn(conn, ms, null); } }
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Code Sample 1:
public String post(Map<String, String> headersMap, String monitoringRequest) { HttpClient httpClient = new DefaultHttpClient(); httpClient.getParams().setParameter("http.useragent", "sla@soi OCCI Client v0.2"); HttpPost httpPost = new HttpPost("http://" + hostname + ":" + port + resource); List<Header> headersList = this.convert2Headers(headersMap); for (Iterator<Header> iterator = headersList.iterator(); iterator.hasNext(); ) { httpPost.addHeader(iterator.next()); } if (monitoringRequest == null) { logger.info("Monitoring Request has not been specified - "); monitoringRequest = Terms.MONITORING_NOT_CONFIGURED; logger.info("Monitoring Request has not been specified - " + monitoringRequest); } else { logger.info("Monitoring Request is - " + monitoringRequest); } logger.info(httpPost.getRequestLine()); logger.info(httpPost.getAllHeaders()); Header[] headersArray = httpPost.getAllHeaders(); String[] fields = { Response.Location }; HashMap<String, String> occiHeaders = new HashMap<String, String>(); for (int H = 0; H < headersArray.length; H++) { Header header = headersArray[H]; logger.info("header - request -" + header.toString()); logger.info(" headerName - " + header.getName()); logger.info(" headerValue - " + header.getValue()); } String statusLine = null; try { HttpResponse httpResponse = httpClient.execute(httpPost); statusLine = httpResponse.getStatusLine().toString(); int statusCode = httpResponse.getStatusLine().getStatusCode(); logger.info("----------------------------------------"); logger.info("StatusLine - (full) - " + httpResponse.getStatusLine()); logger.info(" StatusCode - " + statusCode); logger.info(" Reason - " + httpResponse.getStatusLine().getReasonPhrase()); logger.info(" Protocol - " + httpResponse.getStatusLine().getProtocolVersion().toString()); logger.info("----------------------------------------"); if (StatusCode.validate(statusCode)) { logger.info("Response Validated"); } else { logger.error("Response NOT Validated"); } Header[] headers = httpResponse.getAllHeaders(); for (int i = 0; i < headers.length; i++) { Header header = headers[i]; logger.info("header - response - " + header.toString()); logger.info(" headerName - " + header.getName()); logger.info(" headerValue - " + header.getValue()); for (int h = 0; h < fields.length; h++) { logger.info(" Looking for - " + fields[h]); if (fields[h].equals(header.getName().toString())) { logger.info(" Found an OCCI Header - " + header.getName()); occiHeaders.put(header.getName(), header.getValue()); } } } } catch (org.apache.http.conn.HttpHostConnectException e) { e.printStackTrace(); logger.error(e); return null; } catch (ClientProtocolException e) { e.printStackTrace(); logger.error(e); return null; } catch (IOException e) { e.printStackTrace(); logger.error(e); return null; } finally { httpClient.getConnectionManager().shutdown(); } logger.info("occiHeaders - " + occiHeaders); if (occiHeaders.containsKey(Response.Location)) { logger.info("Valid Provision"); return occiHeaders.get(Response.Location).toString().replaceAll(Response.jobs, ""); } logger.info("NOT a Valid Provision" + statusLine); return null; }
Code Sample 2:
public void displayItems() throws IOException { URL url = new URL(SNIPPETS_FEED + "?bq=" + URLEncoder.encode(QUERY, "UTF-8") + "&key=" + DEVELOPER_KEY); HttpURLConnection httpConnection = (HttpURLConnection) url.openConnection(); InputStream inputStream = httpConnection.getInputStream(); int ch; while ((ch = inputStream.read()) > 0) { System.out.print((char) ch); } }
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Code Sample 1:
private void parseXMLFile() { String u = WeatherApplication.SERVER + location + ".xml"; InputStream in = null; String str = null; try { URL url = new URL(u); HttpURLConnection con = (HttpURLConnection) url.openConnection(); in = url.openStream(); ParserToolXML prt = new ParserToolXML(in); if (prt.doc == null) { System.err.println(FILE_NOT_FOUND_MSG + u); return; } NodeList ndl = prt.doc.getElementsByTagName("weather"); for (int i = 0; i < ndl.getLength(); i++) { Forecast f = new Forecast(); str = prt.searchElementValue(ndl.item(i), "date"); f.setDate(str); str = prt.searchElementValue(ndl.item(i), "daycode"); f.setDaycode(Integer.parseInt(str.trim())); str = prt.searchElementValue(ndl.item(i), "nightcode"); f.setNightcode(Integer.parseInt(str.trim())); str = prt.searchElementValue(ndl.item(i), "maxtemp"); f.setDaytemp(Integer.parseInt(str.trim())); str = prt.searchElementValue(ndl.item(i), "mintemp"); f.setNighttemp(Integer.parseInt(str.trim())); str = prt.searchElementValue(ndl.item(i), "winddirectionday"); f.setDaywinddir(str); str = prt.searchElementValue(ndl.item(i), "windspeedday"); f.setDaywindspeed(Integer.parseInt(str.trim())); str = prt.searchElementValue(ndl.item(i), "winddirectionnight"); f.setNightwinddir(str); str = prt.searchElementValue(ndl.item(i), "windspeednight"); f.setNightwindspeed(Integer.parseInt(str.trim())); forecastlist.addElement(f); } } catch (MalformedURLException e) { System.err.println(MALFORMED_URL_MSG + u); System.err.println(e.getMessage()); e.printStackTrace(); } catch (IOException e) { } catch (NumberFormatException e) { System.err.println(FILE_CORRUPT_MSG + u); System.err.println("-" + str + "-"); System.err.println(e.getMessage()); e.printStackTrace(); } finally { if (in != null) { try { in.close(); } catch (IOException e) { System.err.println(COULD_NOT_CLOSE_FILE_MSG + u); e.printStackTrace(); } } } }
Code Sample 2:
public void run() { String s; s = ""; try { URL url = new URL("http://www.m-w.com/dictionary/" + word); BufferedReader in = new BufferedReader(new InputStreamReader(url.openStream())); String str; while (((str = in.readLine()) != null) && (!stopped)) { s = s + str; } in.close(); } catch (MalformedURLException e) { } catch (IOException e) { } Pattern pattern = Pattern.compile("Main Entry:.+?<br>(.+?)</td>", Pattern.CASE_INSENSITIVE | Pattern.DOTALL); Matcher matcher = pattern.matcher(s); java.io.StringWriter wr = new java.io.StringWriter(); HTMLDocument doc = null; HTMLEditorKit kit = (HTMLEditorKit) editor.getEditorKit(); try { doc = (HTMLDocument) editor.getDocument(); } catch (Exception e) { } System.out.println(wr); editor.setContentType("text/html"); if (matcher.find()) try { kit.insertHTML(doc, editor.getCaretPosition(), "<HR>" + matcher.group(1) + "<HR>", 0, 0, null); } catch (Exception e) { JOptionPane.showMessageDialog(null, e.getMessage(), "Error", JOptionPane.ERROR_MESSAGE); } else try { kit.insertHTML(doc, editor.getCaretPosition(), "<HR><FONT COLOR='RED'>NOT FOUND!!</FONT><HR>", 0, 0, null); } catch (Exception e) { JOptionPane.showMessageDialog(null, e.getMessage(), "Error", JOptionPane.ERROR_MESSAGE); } button.setEnabled(true); }
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Code Sample 1:
public static String openldapDigestMd5(final String password) { String base64; try { MessageDigest digest = MessageDigest.getInstance("MD5"); digest.update(password.getBytes()); base64 = fr.cnes.sitools.util.Base64.encodeBytes(digest.digest()); } catch (NoSuchAlgorithmException e) { throw new RuntimeException(e); } return OPENLDAP_MD5_PREFIX + base64; }
Code Sample 2:
private ContactModel convertJajahContactToContact(com.funambol.jajah.www.Contact jajahContact) throws JajahException { String temp; if (log.isTraceEnabled()) { log.trace("Converting Jajah contact to Foundation contact: Name:" + jajahContact.getName() + " Email:" + jajahContact.getEmail()); } try { ContactModel contactModel; Contact contact = new Contact(); if (jajahContact.getName() != null && jajahContact.getName().equals("") == false) { if (log.isDebugEnabled()) { log.debug("NAME: " + jajahContact.getName()); } contact.getName().getFirstName().setPropertyValue(jajahContact.getName()); } if (jajahContact.getEmail() != null && jajahContact.getEmail().equals("") == false) { if (log.isDebugEnabled()) { log.debug("EMAIL1_ADDRESS: " + jajahContact.getEmail()); } Email email1 = new Email(); email1.setEmailType(SIFC.EMAIL1_ADDRESS); email1.setPropertyValue(jajahContact.getEmail()); contact.getPersonalDetail().addEmail(email1); } if (jajahContact.getMobile() != null && jajahContact.getMobile().equals("") == false) { if (log.isDebugEnabled()) { log.debug("MOBILE_TELEPHONE_NUMBER: " + jajahContact.getMobile()); } Phone phone = new Phone(); phone.setPhoneType(SIFC.MOBILE_TELEPHONE_NUMBER); temp = jajahContact.getMobile().replace("-", ""); if (!(temp.startsWith("+") || temp.startsWith("00"))) temp = "+".concat(temp); phone.setPropertyValue(temp); contact.getPersonalDetail().addPhone(phone); } if (jajahContact.getLandline() != null && jajahContact.getLandline().equals("") == false) { if (log.isDebugEnabled()) { log.debug("HOME_TELEPHONE_NUMBER: " + jajahContact.getLandline()); } Phone phone = new Phone(); phone.setPhoneType(SIFC.HOME_TELEPHONE_NUMBER); temp = jajahContact.getLandline().replace("-", ""); if (!(temp.startsWith("+") || temp.startsWith("00"))) temp = "+".concat(temp); phone.setPropertyValue(temp); contact.getPersonalDetail().addPhone(phone); } if (jajahContact.getOffice() != null && jajahContact.getOffice().equals("") == false) { if (log.isDebugEnabled()) { log.debug("BUSINESS_TELEPHONE_NUMBER: " + jajahContact.getOffice()); } Phone phone = new Phone(); phone.setPhoneType(SIFC.BUSINESS_TELEPHONE_NUMBER); temp = jajahContact.getOffice().replace("-", ""); if (!(temp.startsWith("+") || temp.startsWith("00"))) temp = "+".concat(temp); phone.setPropertyValue(temp); contact.getBusinessDetail().addPhone(phone); } if (log.isDebugEnabled()) { log.debug("CONTACT_ID: " + jajahContact.getId()); } contactModel = new ContactModel(String.valueOf(jajahContact.getId()), contact); ContactToSIFC convert = new ContactToSIFC(null, null); String sifObject = convert.convert(contactModel); MessageDigest m = MessageDigest.getInstance("MD5"); m.update(sifObject.getBytes()); String md5Hash = (new BigInteger(m.digest())).toString(); contactModel.setMd5Hash(md5Hash); return contactModel; } catch (Exception e) { throw new JajahException("JAJAH - convertJajahContactToContact error: " + e.getMessage()); } }
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Code Sample 1:
@Test public final void testCheckCookies() { URL url = null; try { url = new URL("http://localhost:8080"); } catch (MalformedURLException e1) { e1.printStackTrace(); } StringBuffer content = new StringBuffer(); try { HttpURLConnection connection = (HttpURLConnection) url.openConnection(); connection.setRequestProperty("User-Agent", "Mozilla/4.0 (compatible; MSIE 5.5; Windows NT 5.0; H010818)"); cookie = connection.getHeaderField("Set-Cookie"); if (cookie != null) System.out.println("cookie: " + cookie.toString()); connection.setDoInput(true); InputStream is = connection.getInputStream(); byte[] buffer = new byte[2048]; int count; while (-1 != (count = is.read(buffer))) { content.append(new String(buffer, 0, count)); } } catch (IOException e) { System.out.print(e.getMessage()); return; } }
Code Sample 2:
private void copyEntries() { if (zipFile != null) { Enumeration<? extends ZipEntry> enumerator = zipFile.entries(); while (enumerator.hasMoreElements()) { ZipEntry entry = enumerator.nextElement(); if (!entry.isDirectory() && !toIgnore.contains(normalizePath(entry.getName()))) { ZipEntry originalEntry = new ZipEntry(entry.getName()); try { zipOutput.putNextEntry(originalEntry); IOUtils.copy(getInputStream(entry.getName()), zipOutput); zipOutput.closeEntry(); } catch (IOException e) { e.printStackTrace(); } } } } }
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Code Sample 1:
public void open() throws IOException, RecursionException { String encoding = null; if (source != null) { Reader sourceReader = source.getCharacterStream(); if (sourceReader != null) { if (readerReader == null) readerReader = new XMLReaderReader(); readerReader.reset(sourceReader, true); isStandalone = readerReader.isXMLStandalone(); activeReader = readerReader; isOpen = true; return; } InputStream in = source.getByteStream(); if (in != null) { if (streamReader == null) streamReader = new XMLStreamReader(); streamReader.reset(in, source.getEncoding(), true); isOpen = true; isStandalone = streamReader.isXMLStandalone(); activeReader = streamReader; return; } url = new URL(defaultContext, source.getSystemId()); sysID = url.toString(); encoding = source.getEncoding(); } if (streamReader == null) streamReader = new XMLStreamReader(); streamReader.reset(url.openStream(), encoding, true); isStandalone = streamReader.isXMLStandalone(); activeReader = streamReader; isOpen = true; }
Code Sample 2:
public static SOAPMessage call(SOAPMessage request, URL url) throws IOException, SOAPException { URLConnection conn = url.openConnection(); conn.setDoOutput(true); conn.setDoInput(true); conn.connect(); request.writeTo(conn.getOutputStream()); MessageFactory mf = MessageFactory.newInstance(SOAPConstants.SOAP_1_2_PROTOCOL); return mf.createMessage(null, conn.getInputStream()); }
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Code Sample 1:
public void testConvert() throws IOException, ConverterException { InputStreamReader reader = new InputStreamReader(new FileInputStream("test" + File.separator + "input" + File.separator + "A0851ohneex.dat"), CharsetUtil.forName("x-PICA")); FileWriter writer = new FileWriter("test" + File.separator + "output" + File.separator + "ddbInterToMarcxmlTest.out"); Converter c = context.getConverter("ddb-intern", "MARC21-xml", "x-PICA", "UTF-8"); ConversionParameters params = new ConversionParameters(); params.setSourceCharset("x-PICA"); params.setTargetCharset("UTF-8"); params.setAddCollectionHeader(true); params.setAddCollectionFooter(true); c.convert(reader, writer, params); }
Code Sample 2:
public static void main(String[] args) throws Exception { String localSrc = args[0]; String dst = args[1]; InputStream in = new BufferedInputStream(new FileInputStream(localSrc)); Configuration conf = new Configuration(); FileSystem fs = FileSystem.get(URI.create(dst), conf); OutputStream out = fs.create(new Path(dst), new Progressable() { public void progress() { System.out.print("."); } }); IOUtils.copyBytes(in, out, 4096, true); }
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Code Sample 1:
@ActionMethod public void mirror() throws IOException { final URL url = new URL("http://127.0.0.1:" + testPort + "/mirror"); final HttpURLConnection con = (HttpURLConnection) url.openConnection(); con.setRequestProperty(Http11Header.AUTHORIZATION, "Basic QWxhZGRpbjpvcGVuIHNlc2FtZQ=="); con.setRequestProperty(Http11Header.WWW_AUTHENTICATE, "Basic realm=\"karatasi\""); final InputStream in = con.getInputStream(); final byte[] buf = new byte[4096]; textArea.setText(""); for (int bytesRead; (bytesRead = in.read(buf)) != -1; ) { textArea.append(new String(buf, 0, bytesRead)); } }
Code Sample 2:
@Override public void setContentAsStream(InputStream input) throws IOException { BufferedOutputStream output = new BufferedOutputStream(new FileOutputStream(htmlFile)); try { IOUtils.copy(input, output); } finally { output.close(); } if (this.getLastModified() != -1) { htmlFile.setLastModified(this.getLastModified()); } }
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Code Sample 1:
public void readMESHDescriptorFileIntoFiles(String outfiledir) { String inputLine, ins; String filename = getMESHdescriptorfilename(); String uid = ""; String name = ""; String description = ""; String element_of = ""; Vector treenr = new Vector(); Vector related = new Vector(); Vector synonyms = new Vector(); Vector actions = new Vector(); Vector chemicals = new Vector(); Vector allCASchemicals = new Vector(); Set CAS = new TreeSet(); Map treenr2uid = new TreeMap(); Map uid2name = new TreeMap(); String cut1, cut2; try { BufferedReader in = new BufferedReader(new FileReader(filename)); String outfile = outfiledir + "\\mesh"; BufferedWriter out_concept = new BufferedWriter(new FileWriter(outfile + "_concept.txt")); BufferedWriter out_concept_name = new BufferedWriter(new FileWriter(outfile + "_concept_name.txt")); BufferedWriter out_relation = new BufferedWriter(new FileWriter(outfile + "_relation.txt")); BufferedWriter cas_mapping = new BufferedWriter(new FileWriter(outfile + "to_cas_mapping.txt")); BufferedWriter ec_mapping = new BufferedWriter(new FileWriter(outfile + "to_ec_mapping.txt")); Connection db = tools.openDB("kb"); String query = "SELECT hierarchy_complete,uid FROM mesh_tree, mesh_graph_uid_name WHERE term=name"; ResultSet rs = tools.executeQuery(db, query); while (rs.next()) { String db_treenr = rs.getString("hierarchy_complete"); String db_uid = rs.getString("uid"); treenr2uid.put(db_treenr, db_uid); } db.close(); System.out.println("Reading in the DUIDs ..."); BufferedReader in_for_mapping = new BufferedReader(new FileReader(filename)); inputLine = getNextLine(in_for_mapping); boolean leave = false; while ((in_for_mapping != null) && (inputLine != null)) { if (inputLine.startsWith("<DescriptorRecord DescriptorClass")) { inputLine = getNextLine(in_for_mapping); cut1 = "<DescriptorUI>"; cut2 = "</DescriptorUI>"; String mesh_uid = inputLine.substring(cut1.length(), inputLine.indexOf(cut2)); if (mesh_uid.compareTo("D041441") == 0) leave = true; inputLine = getNextLine(in_for_mapping); inputLine = getNextLine(in_for_mapping); cut1 = "<String>"; cut2 = "</String>"; String mesh_name = inputLine.substring(cut1.length(), inputLine.indexOf(cut2)); uid2name.put(mesh_uid, mesh_name); } inputLine = getNextLine(in_for_mapping); } in_for_mapping.close(); BufferedReader in_ec_numbers = new BufferedReader(new FileReader("e:\\projects\\ondex\\ec_concept_acc.txt")); Set ec_numbers = new TreeSet(); String ec_line = in_ec_numbers.readLine(); while (in_ec_numbers.ready()) { StringTokenizer st = new StringTokenizer(ec_line); st.nextToken(); ec_numbers.add(st.nextToken()); ec_line = in_ec_numbers.readLine(); } in_ec_numbers.close(); tools.printDate(); inputLine = getNextLine(in); while (inputLine != null) { if (inputLine.startsWith("<DescriptorRecord DescriptorClass")) { treenr.clear(); related.clear(); synonyms.clear(); actions.clear(); chemicals.clear(); boolean id_ready = false; boolean line_read = false; while ((inputLine != null) && (!inputLine.startsWith("</DescriptorRecord>"))) { line_read = false; if ((inputLine.startsWith("<DescriptorUI>")) && (!id_ready)) { cut1 = "<DescriptorUI>"; cut2 = "</DescriptorUI>"; uid = inputLine.substring(cut1.length(), inputLine.indexOf(cut2)); inputLine = getNextLine(in); inputLine = getNextLine(in); cut1 = "<String>"; cut2 = "</String>"; name = inputLine.substring(cut1.length(), inputLine.indexOf(cut2)); id_ready = true; } if (inputLine.compareTo("<SeeRelatedList>") == 0) { while ((inputLine != null) && (inputLine.indexOf("</SeeRelatedList>") == -1)) { if (inputLine.startsWith("<DescriptorUI>")) { cut1 = "<DescriptorUI>"; cut2 = "</DescriptorUI>"; String id = inputLine.substring(cut1.length(), inputLine.indexOf(cut2)); related.add(id); } inputLine = getNextLine(in); line_read = true; } } if (inputLine.compareTo("<TreeNumberList>") == 0) { while ((inputLine != null) && (inputLine.indexOf("</TreeNumberList>") == -1)) { if (inputLine.startsWith("<TreeNumber>")) { cut1 = "<TreeNumber>"; cut2 = "</TreeNumber>"; String id = inputLine.substring(cut1.length(), inputLine.indexOf(cut2)); treenr.add(id); } inputLine = getNextLine(in); line_read = true; } } if (inputLine.startsWith("<Concept PreferredConceptYN")) { boolean prefConcept = false; if (inputLine.compareTo("<Concept PreferredConceptYN=\"Y\">") == 0) prefConcept = true; while ((inputLine != null) && (inputLine.indexOf("</Concept>") == -1)) { if (inputLine.startsWith("<CASN1Name>") && prefConcept) { cut1 = "<CASN1Name>"; cut2 = "</CASN1Name>"; String casn1 = inputLine.substring(cut1.length(), inputLine.indexOf(cut2)); String chem_name = casn1; String chem_description = ""; if (casn1.length() > chem_name.length() + 2) chem_description = casn1.substring(chem_name.length() + 2, casn1.length()); String reg_number = ""; inputLine = getNextLine(in); if (inputLine.startsWith("<RegistryNumber>")) { cut1 = "<RegistryNumber>"; cut2 = "</RegistryNumber>"; reg_number = inputLine.substring(cut1.length(), inputLine.indexOf(cut2)); } Vector chemical = new Vector(); String type = ""; if (reg_number.startsWith("EC")) { type = "EC"; reg_number = reg_number.substring(3, reg_number.length()); } else { type = "CAS"; } chemical.add(type); chemical.add(reg_number); chemical.add(chem_name); chemical.add(chem_description); chemicals.add(chemical); if (type.compareTo("CAS") == 0) { if (!CAS.contains(reg_number)) { CAS.add(reg_number); allCASchemicals.add(chemical); } } } if (inputLine.startsWith("<ScopeNote>") && prefConcept) { cut1 = "<ScopeNote>"; description = inputLine.substring(cut1.length(), inputLine.length()); } if (inputLine.startsWith("<TermUI>")) { inputLine = getNextLine(in); cut1 = "<String>"; cut2 = "</String>"; String syn = inputLine.substring(cut1.length(), inputLine.indexOf(cut2)); if (syn.indexOf("&") != -1) { String syn1 = syn.substring(0, syn.indexOf("&")); String syn2 = syn.substring(syn.indexOf("amp;") + 4, syn.length()); syn = syn1 + " & " + syn2; } if (name.compareTo(syn) != 0) synonyms.add(syn); } if (inputLine.startsWith("<PharmacologicalAction>")) { inputLine = getNextLine(in); inputLine = getNextLine(in); cut1 = "<DescriptorUI>"; cut2 = "</DescriptorUI>"; String act_ui = inputLine.substring(cut1.length(), inputLine.indexOf(cut2)); actions.add(act_ui); } inputLine = getNextLine(in); line_read = true; } } if (!line_read) inputLine = getNextLine(in); } String pos_tag = ""; element_of = "MESHD"; String is_primary = "0"; out_concept.write(uid + "\t" + pos_tag + "\t" + description + "\t" + element_of + "\t"); out_concept.write(is_primary + "\n"); String name_stemmed = ""; String name_tagged = ""; element_of = "MESHD"; String is_unique = "0"; int is_preferred = 1; String original_name = name; String is_not_substring = "0"; out_concept_name.write(uid + "\t" + name + "\t" + name_stemmed + "\t"); out_concept_name.write(name_tagged + "\t" + element_of + "\t"); out_concept_name.write(is_unique + "\t" + is_preferred + "\t"); out_concept_name.write(original_name + "\t" + is_not_substring + "\n"); is_preferred = 0; for (int i = 0; i < synonyms.size(); i++) { name = (String) synonyms.get(i); original_name = name; out_concept_name.write(uid + "\t" + name + "\t" + name_stemmed + "\t"); out_concept_name.write(name_tagged + "\t" + element_of + "\t"); out_concept_name.write(is_unique + "\t" + is_preferred + "\t"); out_concept_name.write(original_name + "\t" + is_not_substring + "\n"); } String rel_type = "is_r"; element_of = "MESHD"; String from_name = name; for (int i = 0; i < related.size(); i++) { String to_uid = (String) related.get(i); String to_name = (String) uid2name.get(to_uid); out_relation.write(uid + "\t" + to_uid + "\t"); out_relation.write(rel_type + "\t" + element_of + "\t"); out_relation.write(from_name + "\t" + to_name + "\n"); } rel_type = "is_a"; element_of = "MESHD"; related.clear(); for (int i = 0; i < treenr.size(); i++) { String tnr = (String) treenr.get(i); if (tnr.length() > 3) tnr = tnr.substring(0, tnr.lastIndexOf(".")); String rel_uid = (String) treenr2uid.get(tnr); if (rel_uid != null) related.add(rel_uid); else System.out.println(uid + ": No DUI found for " + tnr); } for (int i = 0; i < related.size(); i++) { String to_uid = (String) related.get(i); String to_name = (String) uid2name.get(to_uid); out_relation.write(uid + "\t" + to_uid + "\t"); out_relation.write(rel_type + "\t" + element_of + "\t"); out_relation.write(from_name + "\t" + to_name + "\n"); } if (related.size() == 0) System.out.println(uid + ": No is_a relations"); rel_type = "act"; element_of = "MESHD"; for (int i = 0; i < actions.size(); i++) { String to_uid = (String) actions.get(i); String to_name = (String) uid2name.get(to_uid); out_relation.write(uid + "\t" + to_uid + "\t"); out_relation.write(rel_type + "\t" + element_of + "\t"); out_relation.write(from_name + "\t" + to_name + "\n"); } String method = "IMPM"; String score = "1.0"; for (int i = 0; i < chemicals.size(); i++) { Vector chemical = (Vector) chemicals.get(i); String type = (String) chemical.get(0); String chem = (String) chemical.get(1); if (!ec_numbers.contains(chem) && (type.compareTo("EC") == 0)) { if (chem.compareTo("1.14.-") == 0) chem = "1.14.-.-"; else System.out.println("MISSING EC: " + chem); } String id = type + ":" + chem; String entry = uid + "\t" + id + "\t" + method + "\t" + score + "\n"; if (type.compareTo("CAS") == 0) cas_mapping.write(entry); else ec_mapping.write(entry); } } else inputLine = getNextLine(in); } System.out.println("End import descriptors"); tools.printDate(); in.close(); out_concept.close(); out_concept_name.close(); out_relation.close(); cas_mapping.close(); ec_mapping.close(); outfile = outfiledir + "\\cas"; out_concept = new BufferedWriter(new FileWriter(outfile + "_concept.txt")); out_concept_name = new BufferedWriter(new FileWriter(outfile + "_concept_name.txt")); BufferedWriter out_concept_acc = new BufferedWriter(new FileWriter(outfile + "_concept_acc.txt")); for (int i = 0; i < allCASchemicals.size(); i++) { Vector chemical = (Vector) allCASchemicals.get(i); String cas_id = "CAS:" + (String) chemical.get(1); String cas_name = (String) chemical.get(2); String cas_pos_tag = ""; String cas_description = (String) chemical.get(3); String cas_element_of = "CAS"; String cas_is_primary = "0"; out_concept.write(cas_id + "\t" + cas_pos_tag + "\t" + cas_description + "\t"); out_concept.write(cas_element_of + "\t" + cas_is_primary + "\n"); String cas_name_stemmed = ""; String cas_name_tagged = ""; String cas_is_unique = "0"; String cas_is_preferred = "0"; String cas_original_name = cas_name; String cas_is_not_substring = "0"; out_concept_name.write(cas_id + "\t" + cas_name + "\t" + cas_name_stemmed + "\t"); out_concept_name.write(cas_name_tagged + "\t" + cas_element_of + "\t"); out_concept_name.write(cas_is_unique + "\t" + cas_is_preferred + "\t"); out_concept_name.write(cas_original_name + "\t" + cas_is_not_substring + "\n"); out_concept_acc.write(cas_id + "\t" + (String) chemical.get(1) + "\t"); out_concept_acc.write(cas_element_of + "\n"); } out_concept.close(); out_concept_name.close(); out_concept_acc.close(); } catch (Exception e) { settings.writeLog("Error while reading MESH descriptor file: " + e.getMessage()); } }
Code Sample 2:
public void test() throws Exception { File temp = File.createTempFile("test", ".test"); temp.deleteOnExit(); StorageFile s = new StorageFile(temp, "UTF-8"); s.addText("Test"); s.getOutputStream().write("ing is important".getBytes("UTF-8")); s.getWriter().write(" but overrated"); assertEquals("Testing is important but overrated", s.getText()); s.close(ResponseStateOk.getInstance()); assertEquals("Testing is important but overrated", s.getText()); InputStream input = s.getInputStream(); StringWriter writer = new StringWriter(); IOUtils.copy(input, writer, "UTF-8"); assertEquals("Testing is important but overrated", writer.toString()); try { s.getOutputStream(); fail("Should thow an IOException as it is closed."); } catch (IOException e) { } }
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11
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Code Sample 1:
public static void copyFile(File in, File out) throws IOException { FileChannel inChannel = new FileInputStream(in).getChannel(); FileChannel outChannel = new FileOutputStream(out).getChannel(); try { int maxCount = 67076096; long size = inChannel.size(); long position = 0; while (position < size) { position += inChannel.transferTo(position, maxCount, outChannel); } } catch (IOException e) { throw e; } finally { if (inChannel != null) { inChannel.close(); } if (outChannel != null) { outChannel.close(); } } }
Code Sample 2:
public static void copyFile(File in, File out) throws IOException { FileChannel inChannel = new FileInputStream(in).getChannel(); FileChannel outChannel = new FileOutputStream(out).getChannel(); try { inChannel.transferTo(0, inChannel.size(), outChannel); } catch (IOException e) { throw e; } finally { if (inChannel != null) inChannel.close(); if (outChannel != null) outChannel.close(); } }
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11
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Code Sample 1:
public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFormat.ACRNEMA_STREAM) { System.out.println("\n" + src + ": not an ACRNEMA stream!"); return; } p.parseDcmFile(format, Tags.PixelData); if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) { System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert"); return; } boolean hasPixelData = p.getReadTag() == Tags.PixelData; boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12; int pxlen = p.getReadLength(); if (hasPixelData) { if (inflate) { ds.putUS(Tags.BitsAllocated, 16); pxlen = pxlen * 4 / 3; } if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) { System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert"); return; } } ds.putUI(Tags.StudyInstanceUID, uid(studyUID)); ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID)); ds.putUI(Tags.SOPInstanceUID, uid(instUID)); ds.putUI(Tags.SOPClassUID, classUID); if (!ds.contains(Tags.NumberOfSamples)) { ds.putUS(Tags.NumberOfSamples, 1); } if (!ds.contains(Tags.PhotometricInterpretation)) { ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2"); } if (fmi) { ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian)); } OutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); try { } finally { ds.writeFile(out, encodeParam()); if (hasPixelData) { if (!skipGroupLen) { out.write(PXDATA_GROUPLEN); int grlen = pxlen + 8; out.write((byte) grlen); out.write((byte) (grlen >> 8)); out.write((byte) (grlen >> 16)); out.write((byte) (grlen >> 24)); } out.write(PXDATA_TAG); out.write((byte) pxlen); out.write((byte) (pxlen >> 8)); out.write((byte) (pxlen >> 16)); out.write((byte) (pxlen >> 24)); } if (inflate) { int b2, b3; for (; pxlen > 0; pxlen -= 3) { out.write(in.read()); b2 = in.read(); b3 = in.read(); out.write(b2 & 0x0f); out.write(b2 >> 4 | ((b3 & 0x0f) << 4)); out.write(b3 >> 4); } } else { for (; pxlen > 0; --pxlen) { out.write(in.read()); } } out.close(); } System.out.print('.'); } finally { in.close(); } }
Code Sample 2:
private long generateUnixInstallShell(File unixShellFile, String instTemplate, File instClassFile) throws IOException { FileOutputStream byteWriter = new FileOutputStream(unixShellFile); InputStream is = getClass().getResourceAsStream("/" + instTemplate); InputStreamReader isr = new InputStreamReader(is); LineNumberReader reader = new LineNumberReader(isr); String content = ""; String installClassStartStr = "000000000000"; NumberFormat nf = NumberFormat.getInstance(Locale.US); nf.setGroupingUsed(false); nf.setMinimumIntegerDigits(installClassStartStr.length()); int installClassStartPos = 0; long installClassOffset = 0; System.out.println(VAGlobals.i18n("VAArchiver_GenerateInstallShell")); String line = reader.readLine(); while ((line != null) && (!line.startsWith("# InstallClassStart"))) { content += line + "\n"; line = reader.readLine(); } content += "InstallClassStart=" + installClassStartStr + "\n"; installClassStartPos = content.length() - 1 - 1 - installClassStartStr.length(); line = reader.readLine(); while ((line != null) && (!line.startsWith("# InstallClassSize"))) { content += line + "\n"; line = reader.readLine(); } content += new String("InstallClassSize=" + instClassFile.length() + "\n"); line = reader.readLine(); while ((line != null) && (!line.startsWith("# InstallClassName"))) { content += line + "\n"; line = reader.readLine(); } content += new String("InstallClassName=" + instClassName_ + "\n"); line = reader.readLine(); while ((line != null) && (!line.startsWith("# Install class"))) { content += line + "\n"; line = reader.readLine(); } if (line != null) content += line + "\n"; byteWriter.write(content.substring(0, installClassStartPos + 1).getBytes()); byteWriter.write(nf.format(content.length()).getBytes()); byteWriter.write(content.substring(installClassStartPos + 1 + installClassStartStr.length()).getBytes()); installClassOffset = content.length(); content = null; FileInputStream classStream = new FileInputStream(instClassFile); byte[] buf = new byte[2048]; int read = classStream.read(buf); while (read > 0) { byteWriter.write(buf, 0, read); read = classStream.read(buf); } classStream.close(); reader.close(); byteWriter.close(); return installClassOffset; }
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00
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Code Sample 1:
public static List importDate(Report report, TradingDate date) throws ImportExportException { List quotes = new ArrayList(); String urlString = constructURL(date); EODQuoteFilter filter = new MetaStockQuoteFilter(); PreferencesManager.ProxyPreferences proxyPreferences = PreferencesManager.getProxySettings(); try { URL url = new URL(urlString); InputStreamReader input = new InputStreamReader(url.openStream()); BufferedReader bufferedInput = new BufferedReader(input); String line = null; do { line = bufferedInput.readLine(); if (line != null) { try { EODQuote quote = filter.toEODQuote(line); quotes.add(quote); verify(report, quote); } catch (QuoteFormatException e) { report.addError(Locale.getString("DFLOAT_DISPLAY_URL") + ":" + date + ":" + Locale.getString("ERROR") + ": " + e.getMessage()); } } } while (line != null); bufferedInput.close(); } catch (BindException e) { throw new ImportExportException(Locale.getString("UNABLE_TO_CONNECT_ERROR", e.getMessage())); } catch (ConnectException e) { throw new ImportExportException(Locale.getString("UNABLE_TO_CONNECT_ERROR", e.getMessage())); } catch (UnknownHostException e) { throw new ImportExportException(Locale.getString("UNKNOWN_HOST_ERROR", e.getMessage())); } catch (NoRouteToHostException e) { throw new ImportExportException(Locale.getString("DESTINATION_UNREACHABLE_ERROR", e.getMessage())); } catch (MalformedURLException e) { throw new ImportExportException(Locale.getString("INVALID_PROXY_ERROR", proxyPreferences.host, proxyPreferences.port)); } catch (FileNotFoundException e) { report.addError(Locale.getString("FLOAT_DISPLAY_URL") + ":" + date + ":" + Locale.getString("ERROR") + ": " + Locale.getString("NO_QUOTES_FOUND")); } catch (IOException e) { throw new ImportExportException(Locale.getString("ERROR_DOWNLOADING_QUOTES")); } return quotes; }
Code Sample 2:
public String identify(String baseURL) throws OAIException { PrefixResolverDefault prefixResolver; XPath xpath; XPathContext xpathSupport; int ctxtNode; XObject list; Node node; boolean v2 = false; priCheckBaseURL(); try { URL url = new URL(baseURL + "?verb=Identify"); HttpURLConnection http = (HttpURLConnection) url.openConnection(); http = frndTrySend(http); DocumentBuilderFactory docFactory = DocumentBuilderFactory.newInstance(); docFactory.setNamespaceAware(true); if (validation == VALIDATION_VERY_STRICT) { docFactory.setValidating(true); } else { docFactory.setValidating(false); } DocumentBuilder docBuilder = docFactory.newDocumentBuilder(); Document xml = null; try { xml = docBuilder.parse(http.getInputStream()); } catch (IllegalArgumentException iae) { throw new OAIException(OAIException.CRITICAL_ERR, iae.getMessage()); } catch (SAXException se) { if (validation != VALIDATION_LOOSE) { throw new OAIException(OAIException.XML_PARSE_ERR, se.getMessage()); } else { try { url = new URL(baseURL + "?verb=Identify"); http.disconnect(); http = (HttpURLConnection) url.openConnection(); http = frndTrySend(http); xml = docBuilder.parse(priCreateDummyIdentify(http.getInputStream())); } catch (SAXException se2) { throw new OAIException(OAIException.XML_PARSE_ERR, se2.getMessage()); } } } try { descrNamespaceNode = xml.createElement("Identify"); descrNamespaceNode.setAttribute("xmlns:oai_id", XMLNS_OAI + "Identify"); descrNamespaceNode.setAttribute("xmlns:id", XMLNS_ID); descrNamespaceNode.setAttribute("xmlns:epr", XMLNS_EPR); prefixResolver = new PrefixResolverDefault(descrNamespaceNode); xpathSupport = new XPathContext(); ctxtNode = xpathSupport.getDTMHandleFromNode(xml); xpath = new XPath("/oai_id:Identify", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); node = list.nodeset().nextNode(); if (node == null) { descrNamespaceNode.setAttribute("xmlns:oai_id", XMLNS_OAI_2_0); descrNamespaceNode.setAttribute("xmlns:id", XMLNS_ID_2_0); descrNamespaceNode.setAttribute("xmlns:epr", XMLNS_EPR); prefixResolver = new PrefixResolverDefault(descrNamespaceNode); xpath = new XPath("/oai_id:OAI-PMH", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); node = list.nodeset().nextNode(); if (node == null) { descrNamespaceNode.setAttribute("xmlns:oai_id", XMLNS_OAI_1_0 + "Identify"); descrNamespaceNode.setAttribute("xmlns:id", XMLNS_ID_1_0); descrNamespaceNode.setAttribute("xmlns:epr", XMLNS_EPR_1_0); prefixResolver = new PrefixResolverDefault(descrNamespaceNode); } else { xpath = new XPath("oai_id:OAI-PMH/oai_id:error", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); ixmlErrors = list.nodelist(); if (getLastOAIErrorCount() > 0) { strProtocolVersion = "2"; throw new OAIException(OAIException.OAI_ERR, getLastOAIError().getCode() + ": " + getLastOAIError().getReason()); } v2 = true; } } xpath = new XPath("//oai_id:repositoryName", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); node = list.nodeset().nextNode(); if (node != null) { strRepositoryName = node.getFirstChild().getNodeValue(); } else { if (validation == VALIDATION_LOOSE) { strRepositoryName = "UNKNOWN"; } else { throw new OAIException(OAIException.INVALID_RESPONSE_ERR, "Identify missing repositoryName"); } } xpath = new XPath("//oai_id:baseURL", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); node = list.nodeset().nextNode(); if (node != null) { strBaseURL = node.getFirstChild().getNodeValue(); } else { if (validation != VALIDATION_LOOSE) { throw new OAIException(OAIException.INVALID_RESPONSE_ERR, "Identify missing baseURL"); } } xpath = new XPath("//oai_id:protocolVersion", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); node = list.nodeset().nextNode(); if (node != null) { strProtocolVersion = node.getFirstChild().getNodeValue(); } else { if (validation == VALIDATION_LOOSE) { strProtocolVersion = "UNKNOWN"; } else { throw new OAIException(OAIException.INVALID_RESPONSE_ERR, "Identify missing protocolVersion"); } } xpath = new XPath("//oai_id:adminEmail", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); NodeList nl = list.nodelist(); if (nl.getLength() > 0) { strAdminEmail = new String[nl.getLength()]; for (int i = 0; i < nl.getLength(); i++) { strAdminEmail[i] = nl.item(i).getFirstChild().getNodeValue(); } } else { if (validation == VALIDATION_LOOSE) { strAdminEmail = new String[1]; strAdminEmail[0] = "mailto:UNKNOWN"; } else { throw new OAIException(OAIException.INVALID_RESPONSE_ERR, "Identify missing adminEmail"); } } if (v2) { xpath = new XPath("//oai_id:earliestDatestamp", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); node = list.nodeset().nextNode(); if (node != null) { strEarliestDatestamp = node.getFirstChild().getNodeValue(); } else { if (validation == VALIDATION_LOOSE) { strEarliestDatestamp = "UNKNOWN"; } else { throw new OAIException(OAIException.INVALID_RESPONSE_ERR, "Identify missing earliestDatestamp"); } } xpath = new XPath("//oai_id:deletedRecord", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); node = list.nodeset().nextNode(); if (node != null) { strDeletedRecord = node.getFirstChild().getNodeValue(); } else { if (validation == VALIDATION_LOOSE) { strDeletedRecord = "UNKNOWN"; } else { throw new OAIException(OAIException.INVALID_RESPONSE_ERR, "Identify missing deletedRecordp"); } } xpath = new XPath("//oai_id:granularity", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); node = list.nodeset().nextNode(); if (node != null) { strGranularity = node.getFirstChild().getNodeValue(); } else { if (validation == VALIDATION_LOOSE) { strGranularity = "UNKNOWN"; } else { throw new OAIException(OAIException.INVALID_RESPONSE_ERR, "Identify missing granularity"); } } xpath = new XPath("//oai_id:compression", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); nl = list.nodelist(); if (nl.getLength() > 0) { strCompression = new String[nl.getLength()]; for (int i = 0; i < nl.getLength(); i++) { strCompression[i] = nl.item(i).getFirstChild().getNodeValue(); } } } xpath = new XPath("//oai_id:description", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); ixmlDescriptions = list.nodelist(); xpath = new XPath("//oai_id:responseDate", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); node = list.nodeset().nextNode(); if (node != null) { strResponseDate = node.getFirstChild().getNodeValue(); } else { if (validation == VALIDATION_LOOSE) { strResponseDate = ""; } else { throw new OAIException(OAIException.INVALID_RESPONSE_ERR, "GetRecord missing responseDate"); } } xpath = new XPath("//oai_id:requestURL | //oai_id:request", null, prefixResolver, XPath.SELECT, null); list = xpath.execute(xpathSupport, ctxtNode, prefixResolver); node = list.nodeset().nextNode(); if (node != null) { ixmlRequest = node; } else { if (validation == VALIDATION_LOOSE) { ixmlRequest = null; } else { throw new OAIException(OAIException.INVALID_RESPONSE_ERR, "GetRecord missing requestURL"); } } state = STATE_IDENTIFIED; xpath = null; prefixResolver = null; xpathSupport = null; list = null; } catch (TransformerException te) { throw new OAIException(OAIException.CRITICAL_ERR, te.getMessage()); } url = null; docFactory = null; docBuilder = null; } catch (IOException ie) { throw new OAIException(OAIException.CRITICAL_ERR, ie.getMessage()); } catch (FactoryConfigurationError fce) { throw new OAIException(OAIException.CRITICAL_ERR, fce.getMessage()); } catch (ParserConfigurationException pce) { throw new OAIException(OAIException.CRITICAL_ERR, pce.getMessage()); } return strRepositoryName; }
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11
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Code Sample 1:
public void delete(String language, String tag, int row) throws FidoDatabaseException { try { Connection conn = null; Statement stmt = null; try { String sql = "delete from LanguageMorphologies " + "where LanguageName = '" + language + "' and MorphologyTag = '" + tag + "' and " + " Rank = " + row; conn = fido.util.FidoDataSource.getConnection(); conn.setAutoCommit(false); stmt = conn.createStatement(); stmt.executeUpdate(sql); bumpAllRowsUp(stmt, language, tag, row); conn.commit(); } catch (SQLException e) { if (conn != null) conn.rollback(); throw e; } finally { if (stmt != null) stmt.close(); if (conn != null) conn.close(); } } catch (SQLException e) { throw new FidoDatabaseException(e); } }
Code Sample 2:
public boolean ponerColorxRonda(int idJugadorDiv, int idRonda, int dato) { int intResult = 0; String sql = "UPDATE jugadorxdivxronda " + " SET color = " + dato + " WHERE jugadorxDivision_idJugadorxDivision = " + idJugadorDiv + " AND ronda_numeroRonda = " + idRonda; try { connection = conexionBD.getConnection(); connection.setAutoCommit(false); ps = connection.prepareStatement(sql); intResult = ps.executeUpdate(); connection.commit(); } catch (SQLException ex) { ex.printStackTrace(); try { connection.rollback(); } catch (SQLException exe) { exe.printStackTrace(); } } finally { conexionBD.close(ps); conexionBD.close(connection); } return (intResult > 0); }
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00
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Code Sample 1:
protected Class findClass(String name) throws ClassNotFoundException { String classFile = name.replace('.', '/') + ".class"; InputStream classInputStream = null; if (this.extensionJars != null) { for (int i = 0; i < this.extensionJars.length; i++) { JarFile extensionJar = this.extensionJars[i]; JarEntry jarEntry = extensionJar.getJarEntry(classFile); if (jarEntry != null) { try { classInputStream = extensionJar.getInputStream(jarEntry); } catch (IOException ex) { throw new ClassNotFoundException("Couldn't read class " + name, ex); } } } } if (classInputStream == null) { URL url = getResource(classFile); if (url == null) { throw new ClassNotFoundException("Class " + name); } try { classInputStream = url.openStream(); } catch (IOException ex) { throw new ClassNotFoundException("Couldn't read class " + name, ex); } } try { ByteArrayOutputStream out = new ByteArrayOutputStream(); BufferedInputStream in = new BufferedInputStream(classInputStream); byte[] buffer = new byte[8096]; int size; while ((size = in.read(buffer)) != -1) { out.write(buffer, 0, size); } in.close(); return defineClass(name, out.toByteArray(), 0, out.size(), this.protectionDomain); } catch (IOException ex) { throw new ClassNotFoundException("Class " + name, ex); } }
Code Sample 2:
private File copyFile(String fileInClassPath, String systemPath) throws Exception { InputStream is = getClass().getResourceAsStream(fileInClassPath); OutputStream os = new FileOutputStream(systemPath); IOUtils.copy(is, os); is.close(); os.close(); return new File(systemPath); }
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00
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Code Sample 1:
public static void main(String[] args) throws IOException { System.setProperty("java.protocol.xfile", "com.luzan.common.nfs"); if (args.length < 1) usage(); final String cmd = args[0]; if ("delete".equalsIgnoreCase(cmd)) { final String path = getParameter(args, 1); XFile xfile = new XFile(path); if (!xfile.exists()) { System.out.print("File doean't exist.\n"); System.exit(1); } xfile.delete(); } else if ("copy".equalsIgnoreCase(cmd)) { final String pathFrom = getParameter(args, 1); final String pathTo = getParameter(args, 2); final XFile xfileFrom = new XFile(pathFrom); final XFile xfileTo = new XFile(pathTo); if (!xfileFrom.exists()) { System.out.print("File doesn't exist.\n"); System.exit(1); } final String mime = getParameter(args, 3, null); final XFileInputStream in = new XFileInputStream(xfileFrom); final XFileOutputStream xout = new XFileOutputStream(xfileTo); if (!StringUtils.isEmpty(mime)) { final com.luzan.common.nfs.s3.XFileExtensionAccessor xfa = ((com.luzan.common.nfs.s3.XFileExtensionAccessor) xfileTo.getExtensionAccessor()); if (xfa != null) { xfa.setMimeType(mime); xfa.setContentLength(xfileFrom.length()); } } IOUtils.copy(in, xout); xout.flush(); xout.close(); in.close(); } }
Code Sample 2:
public static void printResponseHeaders(String address) { logger.info("Address: " + address); try { URL url = new URL(address); URLConnection conn = url.openConnection(); for (int i = 0; ; i++) { String headerName = conn.getHeaderFieldKey(i); String headerValue = conn.getHeaderField(i); if (headerName == null && headerValue == null) { break; } if (headerName == null) { logger.info(headerValue); continue; } logger.info(headerName + " " + headerValue); } } catch (Exception e) { logger.error("Exception Message: " + e.getMessage()); } }
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00
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Code Sample 1:
@Test public void testCopy_readerToOutputStream_nullOut() throws Exception { InputStream in = new ByteArrayInputStream(inData); in = new YellOnCloseInputStreamTest(in); Reader reader = new InputStreamReader(in, "US-ASCII"); try { IOUtils.copy(reader, (OutputStream) null); fail(); } catch (NullPointerException ex) { } }
Code Sample 2:
protected static byte[] hashPassword(byte[] saltBytes, String plaintextPassword) throws AssertionError { MessageDigest digest; try { digest = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException ex) { throw (AssertionError) new AssertionError("No MD5 message digest supported.").initCause(ex); } digest.update(saltBytes); try { digest.update(plaintextPassword.getBytes("utf-8")); } catch (UnsupportedEncodingException ex) { throw (AssertionError) new AssertionError("No UTF-8 encoding supported.").initCause(ex); } byte[] passwordBytes = digest.digest(); return passwordBytes; }
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11
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Code Sample 1:
public static String backupFile(File source) { File backup = new File(source.getParent() + "/~" + source.getName()); try { BufferedReader reader = new BufferedReader(new InputStreamReader(new FileInputStream(source))); BufferedWriter writer = new BufferedWriter(new OutputStreamWriter(new FileOutputStream(backup))); return FileUtil.backupFile(reader, writer, source.getAbsolutePath()); } catch (FileNotFoundException fe) { String msg = "Failed to find file for backup [" + source.getAbsolutePath() + "]."; _log.error(msg, fe); throw new InvalidImplementationException(msg, fe); } }
Code Sample 2:
private void putAlgosFromJar(File jarfile, AlgoDir dir, Model model) throws FileNotFoundException, IOException { URLClassLoader urlLoader = new URLClassLoader(new URL[] { jarfile.toURI().toURL() }); JarInputStream jis = new JarInputStream(new FileInputStream(jarfile)); JarEntry entry = jis.getNextJarEntry(); String name = null; String tmpdir = System.getProperty("user.dir") + File.separator + Application.getProperty("dir.tmp") + File.separator; byte[] buffer = new byte[1000]; while (entry != null) { name = entry.getName(); if (name.endsWith(".class")) { name = name.substring(0, name.length() - 6); name = name.replace('/', '.'); try { Class<?> cls = urlLoader.loadClass(name); if (IAlgorithm.class.isAssignableFrom(cls) && !cls.isInterface() && ((cls.getModifiers() & Modifier.ABSTRACT) == 0)) { dir.addAlgorithm(cls); model.putClass(cls.getName(), cls); } else if (ISerializable.class.isAssignableFrom(cls)) { model.putClass(cls.getName(), cls); } } catch (ClassNotFoundException e) { e.printStackTrace(); } } else if (Constants.isAllowedImageType(name)) { int lastSep = name.lastIndexOf("/"); if (lastSep != -1) { String dirs = tmpdir + name.substring(0, lastSep); File d = new File(dirs); if (!d.exists()) d.mkdirs(); } String filename = tmpdir + name; File f = new File(filename); if (!f.exists()) { f.createNewFile(); FileOutputStream fos = new FileOutputStream(f); int read = -1; while ((read = jis.read(buffer)) != -1) { fos.write(buffer, 0, read); } fos.close(); } } entry = jis.getNextJarEntry(); } }
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11
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Code Sample 1:
public boolean copy(File fromFile) throws IOException { FileUtility toFile = this; if (!fromFile.exists()) { abort("FileUtility: no such source file: " + fromFile.getAbsolutePath()); return false; } if (!fromFile.isFile()) { abort("FileUtility: can't copy directory: " + fromFile.getAbsolutePath()); return false; } if (!fromFile.canRead()) { abort("FileUtility: source file is unreadable: " + fromFile.getAbsolutePath()); return false; } if (this.isDirectory()) toFile = (FileUtility) (new File(this, fromFile.getName())); if (toFile.exists()) { if (!toFile.canWrite()) { abort("FileUtility: destination file is unwriteable: " + pathName); return false; } } else { String parent = toFile.getParent(); File dir = new File(parent); if (!dir.exists()) { abort("FileUtility: destination directory doesn't exist: " + parent); return false; } if (dir.isFile()) { abort("FileUtility: destination is not a directory: " + parent); return false; } if (!dir.canWrite()) { abort("FileUtility: destination directory is unwriteable: " + parent); return false; } } FileInputStream from = null; FileOutputStream to = null; try { from = new FileInputStream(fromFile); to = new FileOutputStream(toFile); byte[] buffer = new byte[4096]; int bytes_read; while ((bytes_read = from.read(buffer)) != -1) to.write(buffer, 0, bytes_read); } finally { if (from != null) try { from.close(); } catch (IOException e) { ; } if (to != null) try { to.close(); } catch (IOException e) { ; } } return true; }
Code Sample 2:
public static void notify(String msg) throws Exception { String url = "http://api.clickatell.com/http/sendmsg?"; url = add(url, "user", user); url = add(url, "password", password); url = add(url, "api_id", apiId); url = add(url, "to", to); url = add(url, "text", msg); URL u = new URL(url); URLConnection c = u.openConnection(); InputStream is = c.getInputStream(); IOUtils.copy(is, System.out); IOUtils.closeQuietly(is); }
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11
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Code Sample 1:
public static boolean encodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.ENCODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; }
Code Sample 2:
public void guardarRecordatorio() { try { if (espaciosLlenos()) { guardarCantidad(); String dat = ""; String filenametxt = String.valueOf("recordatorio" + cantidadArchivos + ".txt"); String filenamezip = String.valueOf("recordatorio" + cantidadArchivos + ".zip"); cantidadArchivos++; dat += identificarDato(datoSeleccionado) + "\n"; dat += String.valueOf(mesTemporal) + "\n"; dat += String.valueOf(anoTemporal) + "\n"; dat += horaT.getText() + "\n"; dat += lugarT.getText() + "\n"; dat += actividadT.getText() + "\n"; File archivo = new File(filenametxt); FileWriter fw = new FileWriter(archivo); BufferedWriter bw = new BufferedWriter(fw); PrintWriter salida = new PrintWriter(bw); salida.print(dat); salida.close(); BufferedInputStream origin = null; FileOutputStream dest = new FileOutputStream(filenamezip); ZipOutputStream out = new ZipOutputStream(new BufferedOutputStream(dest)); byte data[] = new byte[buffer]; File f = new File(filenametxt); FileInputStream fi = new FileInputStream(f); origin = new BufferedInputStream(fi, buffer); ZipEntry entry = new ZipEntry(filenametxt); out.putNextEntry(entry); int count; while ((count = origin.read(data, 0, buffer)) != -1) out.write(data, 0, count); out.close(); JOptionPane.showMessageDialog(null, "El recordatorio ha sido guardado con exito", "Recordatorio Guardado", JOptionPane.INFORMATION_MESSAGE); marco.hide(); marco.dispose(); establecerMarca(); table.clearSelection(); } else JOptionPane.showMessageDialog(null, "Debe llenar los espacios de Hora, Lugar y Actividad", "Error", JOptionPane.ERROR_MESSAGE); } catch (Exception e) { JOptionPane.showMessageDialog(null, "Error en: " + e.toString(), "Error", JOptionPane.ERROR_MESSAGE); } }
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Code Sample 1:
public void process(String src, String dest) { try { KanjiDAO kanjiDAO = KanjiDAOFactory.getDAO(); MorphologicalAnalyzer mecab = MorphologicalAnalyzer.getInstance(); if (mecab.isActive()) { BufferedReader br = new BufferedReader(new InputStreamReader(new FileInputStream(src), "UTF8")); BufferedWriter bw = new BufferedWriter(new OutputStreamWriter(new FileOutputStream(dest), "UTF8")); String line; bw.write("// // // \r\n$title=\r\n$singer=\r\n$id=\r\n\r\n + _______ // 0 0 0 0 0 0 0\r\n\r\n"); while ((line = br.readLine()) != null) { System.out.println(line); String segment[] = line.split("//"); String japanese = null; String english = null; if (segment.length > 1) english = segment[1].trim(); if (segment.length > 0) japanese = segment[0].trim().replaceAll(" ", "_"); boolean first = true; if (japanese != null) { ArrayList<ExtractedWord> wordList = mecab.extractWord(japanese); Iterator<ExtractedWord> iter = wordList.iterator(); while (iter.hasNext()) { ExtractedWord word = iter.next(); if (first) { first = false; bw.write("*"); } else bw.write(" "); if (word.isParticle) bw.write("- "); else bw.write("+ "); if (!word.original.equals(word.reading)) { System.out.println("--> " + JapaneseString.toRomaji(word.original) + " / " + JapaneseString.toRomaji(word.reading)); KReading[] kr = ReadingAnalyzer.analyzeReadingStub(word.original, word.reading, kanjiDAO); if (kr != null) { for (int i = 0; i < kr.length; i++) { if (i > 0) bw.write(" "); bw.write(kr[i].kanji); if (kr[i].type != KReading.KANA) { bw.write("|"); bw.write(kr[i].reading); } } } else { bw.write(word.original); bw.write("|"); bw.write(word.reading); } } else { bw.write(word.original); } bw.write(" // \r\n"); } if (english != null) { bw.write(english); bw.write("\r\n"); } bw.write("\r\n"); } } br.close(); bw.close(); } else { System.out.println("Mecab couldn't be initialized"); } } catch (Exception e) { e.printStackTrace(); } }
Code Sample 2:
@Override protected void doGet(HttpServletRequest req, HttpServletResponse resp) throws ServletException, IOException { resp.addHeader("Cache-Control", "max-age=" + Constants.HTTP_CACHE_SECONDS); String uuid = req.getRequestURI().substring(req.getRequestURI().indexOf(Constants.SERVLET_FULL_PREFIX) + Constants.SERVLET_FULL_PREFIX.length() + 1); boolean notScale = ClientUtils.toBoolean(req.getParameter(Constants.URL_PARAM_NOT_SCALE)); ServletOutputStream os = resp.getOutputStream(); if (uuid != null && !"".equals(uuid)) { try { String mimetype = fedoraAccess.getMimeTypeForStream(uuid, FedoraUtils.IMG_FULL_STREAM); if (mimetype == null) { mimetype = "image/jpeg"; } ImageMimeType loadFromMimeType = ImageMimeType.loadFromMimeType(mimetype); if (loadFromMimeType == ImageMimeType.JPEG || loadFromMimeType == ImageMimeType.PNG) { StringBuffer sb = new StringBuffer(); sb.append(config.getFedoraHost()).append("/objects/").append(uuid).append("/datastreams/IMG_FULL/content"); InputStream is = RESTHelper.get(sb.toString(), config.getFedoraLogin(), config.getFedoraPassword(), false); if (is == null) { return; } try { IOUtils.copyStreams(is, os); } catch (IOException e) { resp.setStatus(HttpURLConnection.HTTP_NOT_FOUND); LOGGER.error("Unable to open full image.", e); } finally { os.flush(); if (is != null) { try { is.close(); } catch (IOException e) { resp.setStatus(HttpURLConnection.HTTP_NOT_FOUND); LOGGER.error("Unable to close stream.", e); } finally { is = null; } } } } else { Image rawImg = KrameriusImageSupport.readImage(uuid, FedoraUtils.IMG_FULL_STREAM, this.fedoraAccess, 0, loadFromMimeType); BufferedImage scaled = null; if (!notScale) { scaled = KrameriusImageSupport.getSmallerImage(rawImg, 1250, 1000); } else { scaled = KrameriusImageSupport.getSmallerImage(rawImg, 2500, 2000); } KrameriusImageSupport.writeImageToStream(scaled, "JPG", os); resp.setContentType(ImageMimeType.JPEG.getValue()); resp.setStatus(HttpURLConnection.HTTP_OK); } } catch (IOException e) { resp.setStatus(HttpURLConnection.HTTP_NOT_FOUND); LOGGER.error("Unable to open full image.", e); } catch (XPathExpressionException e) { resp.setStatus(HttpURLConnection.HTTP_NOT_FOUND); LOGGER.error("Unable to create XPath expression.", e); } finally { os.flush(); } } }
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Code Sample 1:
private static void readAndRewrite(File inFile, File outFile) throws IOException { ImageInputStream iis = ImageIO.createImageInputStream(new BufferedInputStream(new FileInputStream(inFile))); DcmParser dcmParser = DcmParserFactory.getInstance().newDcmParser(iis); Dataset ds = DcmObjectFactory.getInstance().newDataset(); dcmParser.setDcmHandler(ds.getDcmHandler()); dcmParser.parseDcmFile(null, Tags.PixelData); PixelDataReader pdReader = pdFact.newReader(ds, iis, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR()); System.out.println("reading " + inFile + "..."); pdReader.readPixelData(false); ImageOutputStream out = ImageIO.createImageOutputStream(new BufferedOutputStream(new FileOutputStream(outFile))); DcmEncodeParam dcmEncParam = DcmEncodeParam.IVR_LE; ds.writeDataset(out, dcmEncParam); ds.writeHeader(out, dcmEncParam, Tags.PixelData, dcmParser.getReadVR(), dcmParser.getReadLength()); System.out.println("writing " + outFile + "..."); PixelDataWriter pdWriter = pdFact.newWriter(pdReader.getPixelDataArray(), false, ds, out, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR()); pdWriter.writePixelData(); out.flush(); out.close(); System.out.println("done!"); }
Code Sample 2:
private void unzipData(ZipFile zipfile, ZipEntry entry) { if (entry.getName().equals("backUpExternalInfo.out")) { File outputFile = new File("temp", entry.getName()); if (!outputFile.getParentFile().exists()) { outputFile.getParentFile().mkdirs(); } try { BufferedInputStream inputStream = new BufferedInputStream(zipfile.getInputStream(entry)); BufferedOutputStream outputStream = new BufferedOutputStream(new FileOutputStream(outputFile)); IOUtils.copy(inputStream, outputStream); outputStream.close(); inputStream.close(); } catch (IOException e) { throw new BackupException(e.getMessage()); } } }
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Code Sample 1:
protected BufferedReader getBufferedReader(InputSource input) throws IOException, SAXException { BufferedReader br = null; if (input.getCharacterStream() != null) { br = new BufferedReader(input.getCharacterStream()); } else if (input.getByteStream() != null) { br = new BufferedReader(new InputStreamReader(input.getByteStream())); } else if (input.getSystemId() != null) { URL url = new URL(input.getSystemId()); br = new BufferedReader(new InputStreamReader(url.openStream())); } else { throw new SAXException("Invalid InputSource!"); } return br; }
Code Sample 2:
public static String encodePassword(String password, byte[] seed) throws NoSuchAlgorithmException, UnsupportedEncodingException { if (seed == null) { seed = new byte[12]; secureRandom.nextBytes(seed); } MessageDigest md = MessageDigest.getInstance("MD5"); md.update(seed); md.update(password.getBytes("UTF8")); byte[] digest = md.digest(); byte[] storedPassword = new byte[digest.length + 12]; System.arraycopy(seed, 0, storedPassword, 0, 12); System.arraycopy(digest, 0, storedPassword, 12, digest.length); return new sun.misc.BASE64Encoder().encode(storedPassword); }
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Code Sample 1:
public String getScore(int id) { String title = null; try { URL url = new URL(BASE_URL + id + ".html"); BufferedReader reader = new BufferedReader(new InputStreamReader(url.openStream())); String line; while ((line = reader.readLine()) != null) { if (line.contains("<title>")) { title = line.substring(line.indexOf("<title>") + 7, line.indexOf("</title>")); title = title.substring(0, title.indexOf("|")).trim(); break; } } reader.close(); } catch (IOException e) { e.printStackTrace(); } return title; }
Code Sample 2:
public OperandToken evaluate(Token[] operands, GlobalValues globals) { String s = ""; String lineFile = ""; ; if (getNArgIn(operands) != 1) throwMathLibException("urlread: number of arguments < 1"); if (!(operands[0] instanceof CharToken)) throwMathLibException("urlread: argument must be String"); String urlString = ((CharToken) operands[0]).toString(); URL url = null; try { url = new URL(urlString); } catch (Exception e) { throwMathLibException("urlread: malformed url"); } try { BufferedReader inReader = new BufferedReader(new InputStreamReader(url.openStream())); while ((lineFile = inReader.readLine()) != null) { s += lineFile + "\n"; } inReader.close(); } catch (Exception e) { throwMathLibException("urlread: error input stream"); } return new CharToken(s); }
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Code Sample 1:
private int renumberOrderBy(long tableID) throws SnapInException { int count = 0; Connection con = null; Statement stmt = null; ResultSet rs = null; try { con = getDataSource().getConnection(); con.setAutoCommit(false); stmt = con.createStatement(); StringBuffer query = new StringBuffer(); query.append("SELECT ").append(DatabaseConstants.TableFieldName_JV_FIELDBEHAVIOR_ID).append(" FROM ").append(DatabaseConstants.TableName_JV_FIELDBEHAVIOR).append(" WHERE ").append(DatabaseConstants.TableFieldName_JV_FIELDBEHAVIOR_TABLEID).append(" = ").append(tableID).append(" ORDER BY ").append(DatabaseConstants.TableFieldName_JV_FIELDBEHAVIOR_ORDERBY); Vector rowIDVector = new Vector(); rs = stmt.executeQuery(query.toString()); while (rs.next()) { count++; rowIDVector.add(rs.getLong(DatabaseConstants.TableFieldName_JV_FIELDBEHAVIOR_ID) + ""); } StringBuffer updateString = new StringBuffer(); updateString.append("UPDATE ").append(DatabaseConstants.TableName_JV_FIELDBEHAVIOR).append(" SET ").append(DatabaseConstants.TableFieldName_JV_FIELDBEHAVIOR_ORDERBY).append(" = ? WHERE ").append(DatabaseConstants.TableFieldName_JV_FIELDBEHAVIOR_ID).append(" = ?"); PreparedStatement pstmt = con.prepareStatement(updateString.toString()); int orderByValue = ORDERBY_BY_DELTA_VALUE; Enumeration en = rowIDVector.elements(); while (en.hasMoreElements()) { pstmt.setInt(1, orderByValue); pstmt.setString(2, en.nextElement().toString()); orderByValue += ORDERBY_BY_DELTA_VALUE; pstmt.executeUpdate(); } con.setAutoCommit(true); if (pstmt != null) { pstmt.close(); } } catch (java.sql.SQLException e) { if (con == null) { logger.error("java.sql.SQLException", e); } else { try { logger.error("Transaction is being rolled back."); con.rollback(); con.setAutoCommit(true); } catch (java.sql.SQLException e2) { logger.error("java.sql.SQLException", e2); } } } catch (Exception e) { logger.error("Error occured during RenumberOrderBy", e); } finally { getDataSourceHelper().releaseResources(con, stmt, rs); } return count; }
Code Sample 2:
public long saveDB(Connection con, long id, boolean commit) throws SQLException { StringBuffer SQL = null; Statement statement = null; ResultSet result_set = null; try { statement = con.createStatement(); if (id < 0) { id = QueryUtils.sequenceGetNextID(con, "PATTERN_OUTLINE"); } else { deleteDB(con, id); } SQL = new StringBuffer("insert into "); SQL.append("PATTERN_OUTLINE values ("); SQL.append(id); SQL.append(","); SQL.append(XColor.toInt(pattern.getPatternColor())); SQL.append(","); SQL.append(pattern.getPatternStyle()); SQL.append(","); SQL.append(pattern.getPatternDensity()); SQL.append(","); SQL.append(XColor.toInt(pattern.getBackgroundColor())); SQL.append(","); SQL.append(XColor.toInt(outline.getColor())); SQL.append(","); SQL.append(outline.getStyle()); SQL.append(","); SQL.append(outline.getWidth()); SQL.append(")"); statement.executeUpdate(new String(SQL)); SQL = null; if (commit) { con.commit(); } } catch (SQLException e) { System.err.println(getClass().getName() + ":" + e + " SQL:=" + SQL); if (commit) { con.rollback(); } throw e; } finally { if (statement != null) { try { statement.close(); } catch (SQLException e) { } } } return saveDB(con, id, false); }
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Code Sample 1:
public static String encryptPassword(String password) { if (password == null) return null; MessageDigest digest = null; try { digest = MessageDigest.getInstance("SHA-1"); } catch (NoSuchAlgorithmException e) { log.error("Algorithm not found", e); return null; } digest.reset(); digest.update(password.getBytes()); return hexValue(digest.digest()); }
Code Sample 2:
public static InputStream download_file(String sessionid, String key) { String urlString = "https://s2.cloud.cm/rpc/raw?c=Storage&m=download_file&key=" + key; try { URL url = new URL(urlString); Log.d("current running function name:", "download_file"); HttpURLConnection conn = (HttpURLConnection) url.openConnection(); conn.setRequestProperty("Cookie", "PHPSESSID=" + sessionid); conn.setRequestMethod("POST"); conn.setDoInput(true); InputStream is = conn.getInputStream(); Log.d("size of the picture file", "" + is.available()); return is; } catch (Exception e) { e.printStackTrace(); } return null; }
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Code Sample 1:
public byte[] getHTTPByte(String sUrl) { HttpURLConnection connection = null; InputStream inputStream = null; ByteArrayOutputStream os = null; try { URL url = new URL(sUrl); connection = (HttpURLConnection) url.openConnection(); connection.connect(); int httpStatus = connection.getResponseCode(); if (httpStatus != 200) log.info("getHTTPConent error httpStatus - " + httpStatus); inputStream = new BufferedInputStream(connection.getInputStream()); os = new ByteArrayOutputStream(); InputStream is = new BufferedInputStream(inputStream); byte bytes[] = new byte[40960]; int nRead = -1; while ((nRead = is.read(bytes, 0, 40960)) > 0) { os.write(bytes, 0, nRead); } os.close(); is.close(); inputStream.close(); } catch (IOException e) { log.warn("SpiderUtil getHTTPConent IOException -> ", e); } finally { if (inputStream != null) try { os.close(); inputStream.close(); } catch (IOException e) { } } return os.toByteArray(); }
Code Sample 2:
@Override public boolean copyFile(String srcRootPath, String srcDir, String srcFileName, String destRootPath, String destDir, String destFileName) { File srcPath = new File(srcRootPath + separator() + Database.getDomainName() + separator() + srcDir); if (!srcPath.exists()) { try { srcPath.mkdirs(); } catch (Exception e) { logger.error("Can't create directory...:" + srcPath); return false; } } File destPath = new File(destRootPath + separator() + Database.getDomainName() + separator() + destDir); if (!destPath.exists()) { try { destPath.mkdirs(); } catch (Exception e) { logger.error("Can't create directory...:" + destPath); return false; } } File from = new File(srcPath + separator() + srcFileName); File to = new File(destPath + separator() + destFileName); boolean res = true; FileChannel srcChannel = null; FileChannel destChannel = null; try { srcChannel = new FileInputStream(from).getChannel(); destChannel = new FileOutputStream(to).getChannel(); destChannel.transferFrom(srcChannel, 0, srcChannel.size()); } catch (Exception ex) { logger.error("Exception", ex); res = false; } finally { if (destChannel != null) { try { destChannel.close(); } catch (IOException ex) { logger.error("Exception", ex); res = false; } } if (srcChannel != null) { try { srcChannel.close(); } catch (IOException ex) { logger.error("Exception", ex); res = false; } } } return res; }
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Code Sample 1:
@RequestMapping(value = "/privatefiles/{file_name}") public void getFile(@PathVariable("file_name") String fileName, HttpServletResponse response, Principal principal) { try { Boolean validUser = false; final String currentUser = principal.getName(); Authentication auth = SecurityContextHolder.getContext().getAuthentication(); if (!auth.getPrincipal().equals(new String("anonymousUser"))) { MetabolightsUser metabolightsUser = (MetabolightsUser) auth.getPrincipal(); if (metabolightsUser != null && metabolightsUser.isCurator()) validUser = true; } if (currentUser != null) { Study study = studyService.getBiiStudy(fileName, true); Collection<User> users = study.getUsers(); Iterator<User> iter = users.iterator(); while (iter.hasNext()) { User user = iter.next(); if (user.getUserName().equals(currentUser)) { validUser = true; break; } } } if (!validUser) throw new RuntimeException(PropertyLookup.getMessage("Entry.notAuthorised")); try { InputStream is = new FileInputStream(privateFtpDirectory + fileName + ".zip"); response.setContentType("application/zip"); IOUtils.copy(is, response.getOutputStream()); } catch (Exception e) { throw new RuntimeException(PropertyLookup.getMessage("Entry.fileMissing")); } response.flushBuffer(); } catch (IOException ex) { logger.info("Error writing file to output stream. Filename was '" + fileName + "'"); throw new RuntimeException("IOError writing file to output stream"); } }
Code Sample 2:
public void copyFile(String oldPathFile, String newPathFile) { try { int bytesum = 0; int byteread = 0; File oldfile = new File(oldPathFile); if (oldfile.exists()) { InputStream inStream = new FileInputStream(oldPathFile); FileOutputStream fs = new FileOutputStream(newPathFile); byte[] buffer = new byte[1444]; while ((byteread = inStream.read(buffer)) != -1) { bytesum += byteread; System.out.println(bytesum); fs.write(buffer, 0, byteread); } inStream.close(); } } catch (Exception e) { message = ("���Ƶ����ļ���������"); } }
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Code Sample 1:
public void postProcess() throws StopWriterVisitorException { dxfWriter.postProcess(); try { FileChannel fcinDxf = new FileInputStream(fTemp).getChannel(); FileChannel fcoutDxf = new FileOutputStream(m_Fich).getChannel(); DriverUtilities.copy(fcinDxf, fcoutDxf); fTemp.delete(); } catch (FileNotFoundException e) { throw new StopWriterVisitorException(getName(), e); } catch (IOException e) { throw new StopWriterVisitorException(getName(), e); } }
Code Sample 2:
public static boolean decodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.DECODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; }
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Code Sample 1:
public static void copy(File file1, File file2) throws IOException { FileReader in = new FileReader(file1); FileWriter out = new FileWriter(file2); int c; while ((c = in.read()) != -1) out.write(c); in.close(); out.close(); }
Code Sample 2:
@Override public HttpResponse makeRequest() throws RequestCancelledException, IllegalStateException, IOException { checkState(); OutputStream out = null; InputStream in = null; try { out = new BufferedOutputStream(new FileOutputStream(destFile)); URLConnection conn = url.openConnection(); in = conn.getInputStream(); byte[] buffer = new byte[BUFFRE_SIZE]; int numRead; long totalSize = conn.getContentLength(); long transferred = 0; started(totalSize); while (!checkAbortFlag() && (numRead = in.read(buffer)) != -1) { out.write(buffer, 0, numRead); out.flush(); transferred += numRead; progress(transferred); } if (checkAbortFlag()) { cancelled(); } else { finished(); } if (checkAbortFlag()) { throw new RequestCancelledException(); } } finally { if (out != null) { out.close(); } if (in != null) { in.close(); } } return null; }
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Code Sample 1:
public void writeTo(OutputStream out) throws IOException { if (!closed) { throw new IOException("Stream not closed"); } if (isInMemory()) { memoryOutputStream.writeTo(out); } else { FileInputStream fis = new FileInputStream(outputFile); try { IOUtils.copy(fis, out); } finally { IOUtils.closeQuietly(fis); } } }
Code Sample 2:
public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFormat.ACRNEMA_STREAM) { System.out.println("\n" + src + ": not an ACRNEMA stream!"); return; } p.parseDcmFile(format, Tags.PixelData); if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) { System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert"); return; } boolean hasPixelData = p.getReadTag() == Tags.PixelData; boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12; int pxlen = p.getReadLength(); if (hasPixelData) { if (inflate) { ds.putUS(Tags.BitsAllocated, 16); pxlen = pxlen * 4 / 3; } if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) { System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert"); return; } } ds.putUI(Tags.StudyInstanceUID, uid(studyUID)); ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID)); ds.putUI(Tags.SOPInstanceUID, uid(instUID)); ds.putUI(Tags.SOPClassUID, classUID); if (!ds.contains(Tags.NumberOfSamples)) { ds.putUS(Tags.NumberOfSamples, 1); } if (!ds.contains(Tags.PhotometricInterpretation)) { ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2"); } if (fmi) { ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian)); } OutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); try { } finally { ds.writeFile(out, encodeParam()); if (hasPixelData) { if (!skipGroupLen) { out.write(PXDATA_GROUPLEN); int grlen = pxlen + 8; out.write((byte) grlen); out.write((byte) (grlen >> 8)); out.write((byte) (grlen >> 16)); out.write((byte) (grlen >> 24)); } out.write(PXDATA_TAG); out.write((byte) pxlen); out.write((byte) (pxlen >> 8)); out.write((byte) (pxlen >> 16)); out.write((byte) (pxlen >> 24)); } if (inflate) { int b2, b3; for (; pxlen > 0; pxlen -= 3) { out.write(in.read()); b2 = in.read(); b3 = in.read(); out.write(b2 & 0x0f); out.write(b2 >> 4 | ((b3 & 0x0f) << 4)); out.write(b3 >> 4); } } else { for (; pxlen > 0; --pxlen) { out.write(in.read()); } } out.close(); } System.out.print('.'); } finally { in.close(); } }
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Code Sample 1:
byte[] calculateDigest(String value) { try { MessageDigest mg = MessageDigest.getInstance("SHA1"); mg.update(value.getBytes()); return mg.digest(); } catch (Exception e) { throw Bark.unchecker(e); } }
Code Sample 2:
public static void downloadFile(HttpServletResponse response, String file) throws IOException { response.setContentType(FileUtils.getContentType(file)); response.setContentLength(FileUtils.getContentLength(file)); response.setHeader("Content-type", ResponseUtils.DOWNLOAD_CONTENT_TYPE); response.setHeader("Content-Disposition", "attachment; filename=\"" + FileUtils.getFileName(file) + "\""); response.setHeader("Content-Length", Integer.toString(FileUtils.getContentLength(file))); InputStream input = new FileInputStream(file); OutputStream output = response.getOutputStream(); IOUtils.copy(input, output, true); }
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Code Sample 1:
@Deprecated public static void getAndProcessContents(String videoPageURL, int bufsize, String charset, Closure<String> process) throws IOException { URL url = null; HttpURLConnection connection = null; InputStream is = null; InputStreamReader isr = null; BufferedReader br = null; try { url = new URL(videoPageURL); connection = (HttpURLConnection) url.openConnection(); is = connection.getInputStream(); isr = new InputStreamReader(is, charset); br = new BufferedReader(isr); for (String line = br.readLine(); line != null; line = br.readLine()) { process.exec(line); } } finally { Closeables.closeQuietly(br); Closeables.closeQuietly(isr); Closeables.closeQuietly(is); HttpUtils.disconnect(connection); } }
Code Sample 2:
public String hash(String password) { MessageDigest digest = null; try { digest = MessageDigest.getInstance("SHA-256"); } catch (NoSuchAlgorithmException ex) { log.info("No sha-256 available"); try { digest = MessageDigest.getInstance("SHA-1"); } catch (NoSuchAlgorithmException e) { log.fatal("sha-1 is not available", e); throw new RuntimeException("Couldn't get a hash algorithm from Java"); } } try { digest.reset(); digest.update((salt + password).getBytes("UTF-8")); byte hash[] = digest.digest(); return new String(Base64.encodeBase64(hash, false)); } catch (Throwable t) { throw new RuntimeException("Couldn't hash password"); } }
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Code Sample 1:
public static void unzip(File zipInFile, File outputDir) throws Exception { Enumeration<? extends ZipEntry> entries; ZipFile zipFile = new ZipFile(zipInFile); ZipInputStream zipInputStream = new ZipInputStream(new FileInputStream(zipInFile)); ZipEntry entry = (ZipEntry) zipInputStream.getNextEntry(); File curOutDir = outputDir; while (entry != null) { if (entry.isDirectory()) { curOutDir = new File(curOutDir, entry.getName()); curOutDir.mkdirs(); continue; } File outFile = new File(curOutDir, entry.getName()); File tempDir = outFile.getParentFile(); if (!tempDir.exists()) tempDir.mkdirs(); outFile.createNewFile(); BufferedOutputStream outstream = new BufferedOutputStream(new FileOutputStream(outFile)); int n; byte[] buf = new byte[1024]; while ((n = zipInputStream.read(buf, 0, 1024)) > -1) outstream.write(buf, 0, n); outstream.flush(); outstream.close(); zipInputStream.closeEntry(); entry = zipInputStream.getNextEntry(); } zipInputStream.close(); zipFile.close(); }
Code Sample 2:
public void updateCoordinates(Address address) { String mapURL = "http://maps.google.com/maps/geo?output=csv"; String mapKey = "ABQIAAAAi__aT6y6l86JjbootR-p9xQd1nlEHNeAVGWQhS84yIVN5yGO2RQQPg9QLzy82PFlCzXtMNe6ofKjnA"; String location = address.getStreet() + " " + address.getZip() + " " + address.getCity(); if (logger.isDebugEnabled()) { logger.debug(location); } double[] coordinates = { 0.0, 0.0 }; String content = ""; try { location = URLEncoder.encode(location, "UTF-8"); String request = mapURL + "&q=" + location + "&key=" + mapKey; URL url = new URL(request); BufferedReader reader = new BufferedReader(new InputStreamReader(url.openStream())); String line; while ((line = reader.readLine()) != null) { content += line; } reader.close(); } catch (Exception e) { if (logger.isDebugEnabled()) { logger.debug("Error from google: " + e.getMessage()); } } if (logger.isDebugEnabled()) { logger.debug(content); } StringTokenizer tokenizer = new StringTokenizer(content, ","); int i = 0; while (tokenizer.hasMoreTokens()) { i++; String token = tokenizer.nextToken(); if (i == 3) { coordinates[0] = Double.parseDouble(token); } if (i == 4) { coordinates[1] = Double.parseDouble(token); } } if ((coordinates[0] != 0) || (coordinates[1] != 0)) { address.setLatitude(coordinates[0]); address.setLongitude(coordinates[1]); } else { if (logger.isDebugEnabled()) { logger.debug("Invalid coordinates for address " + address.getId()); } } }
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Code Sample 1:
public static void copy(File from_file, File to_file) throws IOException { if (!from_file.exists()) abort("FileCopy: no such source file: " + from_file.getName()); if (!from_file.isFile()) abort("FileCopy: can't copy directory: " + from_file.getName()); if (!from_file.canRead()) abort("FileCopy: source file is unreadable: " + from_file.getName()); if (to_file.isDirectory()) to_file = new File(to_file, from_file.getName()); if (to_file.exists()) { if (!to_file.canWrite()) abort("FileCopy: destination file is unwriteable: " + to_file.getName()); } else { String parent = to_file.getParent(); if (parent == null) parent = System.getProperty("user.dir"); File dir = new File(parent); if (!dir.exists()) abort("FileCopy: destination directory doesn't exist: " + parent); if (dir.isFile()) abort("FileCopy: destination is not a directory: " + parent); if (!dir.canWrite()) abort("FileCopy: destination directory is unwriteable: " + parent); } FileInputStream from = null; FileOutputStream to = null; try { from = new FileInputStream(from_file); to = new FileOutputStream(to_file); byte[] buffer = new byte[4096]; int bytes_read; while ((bytes_read = from.read(buffer)) != -1) { to.write(buffer, 0, bytes_read); } } finally { if (from != null) { try { from.close(); } catch (IOException e) { e.printStackTrace(); } } if (to != null) { try { to.close(); } catch (IOException e) { e.printStackTrace(); } } } }
Code Sample 2:
public static void copyFile(File in, File out) throws IOException { FileChannel inChannel = new FileInputStream(in).getChannel(); FileChannel outChannel = new FileOutputStream(out).getChannel(); try { int maxCount = (64 * 1024 * 1024) - (32 * 1024); long size = inChannel.size(); long position = 0; while (position < size) { position += inChannel.transferTo(position, maxCount, outChannel); } out.setLastModified(in.lastModified()); } catch (IOException e) { throw e; } finally { if (inChannel != null) inChannel.close(); if (outChannel != null) outChannel.close(); } }
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Code Sample 1:
private static BufferedInputStream getHTTPConnection(String sUrl) { URL url = null; BufferedInputStream bis = null; try { url = new URL(sUrl); HttpURLConnection connection = (HttpURLConnection) url.openConnection(); connection.setRequestMethod("GET"); connection.setDoOutput(true); connection.setConnectTimeout(30000); connection.setReadTimeout(60000); connection.setRequestProperty("Accept-Encoding", "gzip, deflate"); connection.connect(); String encoding = connection.getContentEncoding(); if (!Utilities.isEmpty(encoding) && "gzip".equalsIgnoreCase(encoding)) { bis = new BufferedInputStream(new GZIPInputStream(connection.getInputStream()), IO_BUFFER_SIZE); } else if (!Utilities.isEmpty(encoding) && "deflate".equalsIgnoreCase(encoding)) { bis = new BufferedInputStream(new InflaterInputStream(connection.getInputStream(), new Inflater(true)), IO_BUFFER_SIZE); } else { bis = new BufferedInputStream(connection.getInputStream(), IO_BUFFER_SIZE); } } catch (Exception e) { LogUtil.e(Constants.TAG, e.getMessage()); } return bis; }
Code Sample 2:
public static void main(String[] args) { String inFile = "test_data/blobs.png"; String outFile = "ReadWriteTest.png"; itkImageFileReaderUC2_Pointer reader = itkImageFileReaderUC2.itkImageFileReaderUC2_New(); itkImageFileWriterUC2_Pointer writer = itkImageFileWriterUC2.itkImageFileWriterUC2_New(); reader.SetFileName(inFile); writer.SetFileName(outFile); writer.SetInput(reader.GetOutput()); writer.Update(); }
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Code Sample 1:
public static String rename_file(String sessionid, String key, String newFileName) { String jsonstring = ""; try { Log.d("current running function name:", "rename_file"); HttpClient httpclient = new DefaultHttpClient(); HttpPost httppost = new HttpPost("https://mt0-app.cloud.cm/rpc/json"); List<NameValuePair> nameValuePairs = new ArrayList<NameValuePair>(2); nameValuePairs.add(new BasicNameValuePair("c", "Storage")); nameValuePairs.add(new BasicNameValuePair("m", "rename_file")); nameValuePairs.add(new BasicNameValuePair("new_name", newFileName)); nameValuePairs.add(new BasicNameValuePair("key", key)); httppost.setEntity(new UrlEncodedFormEntity(nameValuePairs)); httppost.setHeader("Cookie", "PHPSESSID=" + sessionid); HttpResponse response = httpclient.execute(httppost); jsonstring = EntityUtils.toString(response.getEntity()); Log.d("jsonStringReturned:", jsonstring); return jsonstring; } catch (Exception e) { e.printStackTrace(); } return jsonstring; }
Code Sample 2:
public static String encryptPassword(String password) throws PasswordException { String hash = null; if (password != null && !password.equals("")) { try { MessageDigest md = MessageDigest.getInstance("SHA"); md.update(password.getBytes("UTF-8")); byte raw[] = md.digest(); hash = String.valueOf(Base64Coder.encode(raw)); } catch (NoSuchAlgorithmException nsae) { throw new PasswordException(PasswordException.SYSTEM_ERROR); } catch (UnsupportedEncodingException uee) { throw new PasswordException(PasswordException.SYSTEM_ERROR); } } return hash; }
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Code Sample 1:
public void setPassword(String plaintext) throws java.security.NoSuchAlgorithmException { StringBuffer encrypted = new StringBuffer(); java.security.MessageDigest digest = java.security.MessageDigest.getInstance("MD5"); digest.update(plaintext.getBytes()); byte[] digestArray = digest.digest(); for (int i = 0; i < digestArray.length; i++) { encrypted.append(byte2hex(digestArray[i])); } setEncryptedPassword(encrypted.toString()); }
Code Sample 2:
public static String MD5(String text) throws NoSuchAlgorithmException, UnsupportedEncodingException { MessageDigest md; md = MessageDigest.getInstance("MD5"); byte[] md5hash = new byte[32]; md.update(text.getBytes("iso-8859-1"), 0, text.length()); md5hash = md.digest(); return convertToHex(md5hash); }
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Code Sample 1:
@Override public void copyFile2File(final File src, final File dest, final boolean force) throws C4JException { if (dest.exists()) if (force && !dest.delete()) throw new C4JException(format("Copying ‘%s’ to ‘%s’ failed; cannot overwrite existing file.", src.getPath(), dest.getPath())); FileChannel inChannel = null; FileChannel outChannel = null; try { inChannel = new FileInputStream(src).getChannel(); outChannel = new FileOutputStream(dest).getChannel(); inChannel.transferTo(0, inChannel.size(), outChannel); if (src.canExecute()) dest.setExecutable(true, false); } catch (final IOException e) { throw new C4JException(format("Could not copy ‘%s’ to ‘%s’.", src.getPath(), dest.getPath()), e); } finally { if (inChannel != null) try { try { inChannel.close(); } catch (final IOException e) { throw new C4JException(format("Could not close input stream for ‘%s’.", src.getPath()), e); } } finally { if (outChannel != null) try { outChannel.close(); } catch (final IOException e) { throw new C4JException(format("Could not close output stream for ‘%s’.", dest.getPath()), e); } } } }
Code Sample 2:
@Override protected void doPost(final HttpServletRequest req, final HttpServletResponse resp) throws ServletException, IOException { final String url = req.getParameter("url"); if (!isAllowed(url)) { resp.setStatus(HttpServletResponse.SC_FORBIDDEN); return; } final HttpClient client = new HttpClient(); client.getParams().setVersion(HttpVersion.HTTP_1_0); final PostMethod method = new PostMethod(url); method.getParams().setVersion(HttpVersion.HTTP_1_0); method.setFollowRedirects(false); final RequestEntity entity = new InputStreamRequestEntity(req.getInputStream()); method.setRequestEntity(entity); try { final int statusCode = client.executeMethod(method); if (statusCode != -1) { InputStream is = null; ServletOutputStream os = null; try { is = method.getResponseBodyAsStream(); try { os = resp.getOutputStream(); IOUtils.copy(is, os); } finally { if (os != null) { try { os.flush(); } catch (IOException ignored) { } } } } catch (IOException ioex) { final String message = ioex.getMessage(); if (!"chunked stream ended unexpectedly".equals(message)) { throw ioex; } } finally { IOUtils.closeQuietly(is); } } } finally { method.releaseConnection(); } }
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Code Sample 1:
public InputSource resolveEntity(String pPublicId, String pSystemId) throws SAXException, IOException { try { URL url = new URL(pSystemId); String fileName = (String) urlMap.get(url); if (fileName != null) { FileInputStream istream = new FileInputStream(new File(schemaDir, fileName)); InputSource isource = new InputSource(istream); isource.setSystemId(url.toString()); return isource; } String file = url.getFile(); if (file == null) { file = ""; } else { int offset = file.lastIndexOf('/'); if (offset >= 0) { file = file.substring(offset + 1); } } if ("".equals(file)) { file = "schema.xsd"; } int offset = file.lastIndexOf('.'); String prefix; String suffix; String numAsStr = ""; if (offset > 0 && offset < file.length()) { prefix = file.substring(0, offset); suffix = file.substring(offset); } else { prefix = file; suffix = ".xsd"; } File f; for (int num = 1; ; ++num) { f = new File(schemaDir, prefix + numAsStr + suffix); if (f.exists()) { numAsStr = "_" + num; } else { break; } } InputStream istream = url.openStream(); schemaDir.mkdirs(); FileOutputStream fos = new FileOutputStream(f); try { byte[] buffer = new byte[1024]; for (; ; ) { int res = istream.read(buffer); if (res == -1) { break; } else if (res > 0) { fos.write(buffer, 0, res); } } istream.close(); fos.close(); fos = null; } finally { if (fos != null) { try { f.delete(); } catch (Throwable ignore) { } } } urlMap.put(url, f.getName()); InputSource isource = new InputSource(new FileInputStream(f)); isource.setSystemId(url.toString()); return isource; } catch (Exception e) { JaxMeServlet.this.log("Failed to resolve URL " + pSystemId, e); } return null; }
Code Sample 2:
@Override public String compute_hash(String plaintext) { MessageDigest d; try { d = MessageDigest.getInstance(get_algorithm_name()); d.update(plaintext.getBytes()); byte[] hash = d.digest(); StringBuffer sb = new StringBuffer(); for (byte b : hash) sb.append(String.format("%02x", b)); return sb.toString(); } catch (NoSuchAlgorithmException e) { e.printStackTrace(); } return null; }
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Code Sample 1:
private void loadInitialDbState() throws IOException { InputStream in = SchemaAndDataPopulator.class.getClassLoader().getResourceAsStream(resourceName); StringWriter writer = new StringWriter(); IOUtils.copy(in, writer); for (String statement : writer.toString().split(SQL_STATEMENT_DELIMITER)) { logger.info("Executing SQL Statement {}", statement); template.execute(statement); } }
Code Sample 2:
public static void main(String[] args) throws Exception { TripleDES tdes = new TripleDES(); StreamBlockReader reader = new StreamBlockReader(new FileInputStream("D:\\testTDESENC.txt")); StreamBlockWriter writer = new StreamBlockWriter(new FileOutputStream("D:\\testTDESDEC.txt")); SingleKey key = new SingleKey(new Block(128), ""); key = new SingleKey(new Block("01011101110000101001100111001011101000001110111101001001101101101101100000011101100100110000101100001110000001111101001101001101"), ""); Mode mode = new ECBTripleDESMode(tdes); tdes.decrypt(reader, writer, key, mode); }
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Code Sample 1:
private void doTask() { try { log("\n\n\n\n\n\n\n\n\n"); log(" ================================================="); log(" = Starting PSCafePOS ="); log(" ================================================="); log(" = An open source point of sale system ="); log(" = for educational organizations. ="); log(" ================================================="); log(" = General Information ="); log(" = http://pscafe.sourceforge.net ="); log(" = Free Product Support ="); log(" = http://www.sourceforge.net/projects/pscafe ="); log(" ================================================="); log(" = License Overview ="); log(" ================================================="); log(" = PSCafePOS is a POS System for Schools ="); log(" = Copyright (C) 2007 Charles Syperski ="); log(" = ="); log(" = This program is free software; you can ="); log(" = redistribute it and/or modify it under the ="); log(" = terms of the GNU General Public License as ="); log(" = published by the Free Software Foundation; ="); log(" = either version 2 of the License, or any later ="); log(" = version. ="); log(" = ="); log(" = This program is distributed in the hope that ="); log(" = it will be useful, but WITHOUT ANY WARRANTY; ="); log(" = without even the implied warranty of ="); log(" = MERCHANTABILITY or FITNESS FOR A PARTICULAR ="); log(" = PURPOSE. ="); log(" = ="); log(" = See the GNU General Public License for more ="); log(" = details. ="); log(" = ="); log(" = You should have received a copy of the GNU ="); log(" = General Public License along with this ="); log(" = program; if not, write to the ="); log(" = ="); log(" = Free Software Foundation, Inc. ="); log(" = 59 Temple Place, Suite 330 ="); log(" = Boston, MA 02111-1307 USA ="); log(" ================================================="); log(" = If you have any questions of comments please ="); log(" = let us know at http://pscafe.sourceforge.net ="); log(" ================================================="); pause(); File settings; if (blAltSettings) { System.out.println("\n + Alternative path specified at run time:"); System.out.println(" Path: " + strAltPath); settings = new File(strAltPath); } else { settings = new File("etc" + File.separatorChar + "settings.dbp"); } System.out.print("\n + Checking for existance of settings..."); boolean blGo = false; if (settings.exists() && settings.canRead()) { log("[OK]"); blGo = true; if (forceConfig) { System.out.print("\n + Running Config Wizard (at user request)..."); Process pp = Runtime.getRuntime().exec("java -cp . PSSettingWizard etc" + File.separatorChar + "settings.dbp"); InputStream stderr = pp.getErrorStream(); InputStream stdin = pp.getInputStream(); InputStreamReader isr = new InputStreamReader(stdin); BufferedReader br = new BufferedReader(isr); String ln = null; while ((ln = br.readLine()) != null) System.out.println(" " + ln); pp.waitFor(); } } else { log("[FAILED]"); settings = new File("etc" + File.separatorChar + "settings.dbp.firstrun"); System.out.print("\n + Checking if this is the first run... "); if (settings.exists() && settings.canRead()) { log("[FOUND]"); File toFile = new File("etc" + File.separatorChar + "settings.dbp"); FileInputStream from = null; FileOutputStream to = null; try { from = new FileInputStream(settings); to = new FileOutputStream(toFile); byte[] buffer = new byte[4096]; int bytes_read; while ((bytes_read = from.read(buffer)) != -1) { to.write(buffer, 0, bytes_read); } if (toFile.exists() && toFile.canRead()) { settings = null; settings = new File("etc" + File.separatorChar + "settings.dbp"); } System.out.print("\n + Running Settings Wizard... "); try { Process p = Runtime.getRuntime().exec("java PSSettingWizard etc" + File.separatorChar + "settings.dbp"); InputStream stderr = p.getErrorStream(); InputStream stdin = p.getInputStream(); InputStreamReader isr = new InputStreamReader(stdin); BufferedReader br = new BufferedReader(isr); String ln = null; while ((ln = br.readLine()) != null) System.out.println(" " + ln); p.waitFor(); log("[OK]"); if (p.exitValue() == 0) blGo = true; } catch (InterruptedException i) { System.err.println(i.getMessage()); } } catch (Exception ex) { System.err.println(ex.getMessage()); } finally { if (from != null) try { from.close(); } catch (IOException e) { ; } if (to != null) try { to.close(); } catch (IOException e) { ; } } } else { settings = null; settings = new File("etc" + File.separatorChar + "settings.dbp"); DBSettingsWriter writ = new DBSettingsWriter(); writ.writeFile(new DBSettings(), settings); blGo = true; } } if (blGo) { String cp = "."; try { File classpath = new File("lib"); File[] subFiles = classpath.listFiles(); for (int i = 0; i < subFiles.length; i++) { if (subFiles[i].isFile()) { cp += File.pathSeparatorChar + "lib" + File.separatorChar + subFiles[i].getName() + ""; } } } catch (Exception e) { System.err.println(e.getMessage()); } try { boolean blExecutePOS = false; System.out.print("\n + Checking runtime settings... "); DBSettings info = null; if (settings == null) settings = new File("etc" + File.separatorChar + "settings.dbp"); if (settings.exists() && settings.canRead()) { DBSettingsWriter writ = new DBSettingsWriter(); info = (DBSettings) writ.loadSettingsDB(settings); if (info != null) { blExecutePOS = true; } } if (blExecutePOS) { log("[OK]"); String strSSL = ""; String strSSLDebug = ""; if (info != null) { debug = info.get(DBSettings.MAIN_DEBUG).compareTo("1") == 0; if (debug) log(" * Debug Mode is ON"); else log(" * Debug Mode is OFF"); if (info.get(DBSettings.POS_SSLENABLED).compareTo("1") == 0) { strSSL = "-Djavax.net.ssl.keyStore=" + info.get(DBSettings.POS_SSLKEYSTORE) + " -Djavax.net.ssl.keyStorePassword=pscafe -Djavax.net.ssl.trustStore=" + info.get(DBSettings.POS_SSLTRUSTSTORE) + " -Djavax.net.ssl.trustStorePassword=pscafe"; log(" * Using SSL"); debug(" " + strSSL); if (info.get(DBSettings.POS_SSLDEBUG).compareTo("1") == 0) { strSSLDebug = "-Djavax.net.debug=all"; log(" * SSL Debugging enabled"); debug(" " + strSSLDebug); } } } String strPOSRun = "java -cp " + cp + " " + strSSL + " " + strSSLDebug + " POSDriver " + settings.getPath(); debug(strPOSRun); System.out.print("\n + Running PSCafePOS... "); Process pr = Runtime.getRuntime().exec(strPOSRun); System.out.print("[OK]\n\n"); InputStream stderr = pr.getErrorStream(); InputStream stdin = pr.getInputStream(); InputStreamReader isr = new InputStreamReader(stdin); InputStreamReader isre = new InputStreamReader(stderr); BufferedReader br = new BufferedReader(isr); BufferedReader bre = new BufferedReader(isre); String line = null; String lineError = null; log(" ================================================="); log(" = Output from PSCafePOS System ="); log(" ================================================="); while ((line = br.readLine()) != null || (lineError = bre.readLine()) != null) { if (line != null) System.out.println(" [PSCafePOS]" + line); if (lineError != null) System.out.println(" [ERR]" + lineError); } pr.waitFor(); log(" ================================================="); log(" = End output from PSCafePOS System ="); log(" = PSCafePOS has exited ="); log(" ================================================="); } else { log("[Failed]"); } } catch (Exception i) { log(i.getMessage()); i.printStackTrace(); } } } catch (Exception e) { log(e.getMessage()); } }
Code Sample 2:
public File extractID3v2TagDataIntoFile(File outputFile) throws TagNotFoundException, IOException { int startByte = (int) ((MP3AudioHeader) audioHeader).getMp3StartByte(); if (startByte >= 0) { FileInputStream fis = new FileInputStream(file); FileChannel fc = fis.getChannel(); ByteBuffer bb = ByteBuffer.allocate(startByte); fc.read(bb); FileOutputStream out = new FileOutputStream(outputFile); out.write(bb.array()); out.close(); fc.close(); fis.close(); return outputFile; } throw new TagNotFoundException("There is no ID3v2Tag data in this file"); }
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Code Sample 1:
protected synchronized InputStream openURLConnection(StreamDataSetDescriptor dsd, Datum start, Datum end, StringBuffer additionalFormData) throws DasException { String[] tokens = dsd.getDataSetID().split("\\?|\\&"); String dataSetID = tokens[1]; try { String formData = createFormDataString(dataSetID, start, end, additionalFormData); if (dsd.isRestrictedAccess()) { key = server.getKey(""); if (key != null) { formData += "&key=" + URLEncoder.encode(key.toString(), "UTF-8"); } } if (redirect) { formData += "&redirect=1"; } URL serverURL = this.server.getURL(formData); this.lastRequestURL = String.valueOf(serverURL); DasLogger.getLogger(DasLogger.DATA_TRANSFER_LOG).info("opening " + serverURL.toString()); URLConnection urlConnection = serverURL.openConnection(); urlConnection.connect(); String contentType = urlConnection.getContentType(); if (!contentType.equalsIgnoreCase("application/octet-stream")) { BufferedReader bin = new BufferedReader(new InputStreamReader(urlConnection.getInputStream())); String line = bin.readLine(); String message = ""; while (line != null) { message = message.concat(line); line = bin.readLine(); } throw new DasIOException(message); } InputStream in = urlConnection.getInputStream(); if (isLegacyStream()) { return processLegacyStream(in); } else { throw new UnsupportedOperationException(); } } catch (IOException e) { throw new DasIOException(e); } }
Code Sample 2:
public static void extractFile(String jarArchive, String fileToExtract, String destination) { FileWriter writer = null; ZipInputStream zipStream = null; try { FileInputStream inputStream = new FileInputStream(jarArchive); BufferedInputStream bufferedStream = new BufferedInputStream(inputStream); zipStream = new ZipInputStream(bufferedStream); writer = new FileWriter(new File(destination)); ZipEntry zipEntry = null; while ((zipEntry = zipStream.getNextEntry()) != null) { if (zipEntry.getName().equals(fileToExtract)) { int size = (int) zipEntry.getSize(); for (int i = 0; i < size; i++) { writer.write(zipStream.read()); } } } } catch (IOException e) { e.printStackTrace(); } finally { if (zipStream != null) try { zipStream.close(); } catch (IOException e) { e.printStackTrace(); } if (writer != null) try { writer.close(); } catch (IOException e) { e.printStackTrace(); } } }
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Code Sample 1:
protected static byte[] httpConnection(Context context, long token, String url, byte[] pdu, int method, boolean isProxySet, String proxyHost, int proxyPort) throws IOException { if (url == null) { throw new IllegalArgumentException("URL must not be null."); } if (LOCAL_LOGV) { Log.v(TAG, "httpConnection: params list"); Log.v(TAG, "\ttoken\t\t= " + token); Log.v(TAG, "\turl\t\t= " + url); Log.v(TAG, "\tUser-Agent\t\t=" + mUserAgent); Log.v(TAG, "\tmethod\t\t= " + ((method == HTTP_POST_METHOD) ? "POST" : ((method == HTTP_GET_METHOD) ? "GET" : "UNKNOWN"))); Log.v(TAG, "\tisProxySet\t= " + isProxySet); Log.v(TAG, "\tproxyHost\t= " + proxyHost); Log.v(TAG, "\tproxyPort\t= " + proxyPort); } AndroidHttpClient client = null; try { URI hostUrl = new URI(url); HttpHost target = new HttpHost(hostUrl.getHost(), hostUrl.getPort(), HttpHost.DEFAULT_SCHEME_NAME); client = createHttpClient(context); HttpRequest req = null; switch(method) { case HTTP_POST_METHOD: ProgressCallbackEntity entity = new ProgressCallbackEntity(context, token, pdu); entity.setContentType("application/vnd.wap.mms-message"); HttpPost post = new HttpPost(url); post.setEntity(entity); req = post; break; case HTTP_GET_METHOD: req = new HttpGet(url); break; default: Log.e(TAG, "Unknown HTTP method: " + method + ". Must be one of POST[" + HTTP_POST_METHOD + "] or GET[" + HTTP_GET_METHOD + "]."); return null; } HttpParams params = client.getParams(); if (isProxySet) { ConnRouteParams.setDefaultProxy(params, new HttpHost(proxyHost, proxyPort)); } req.setParams(params); req.addHeader(HDR_KEY_ACCEPT, HDR_VALUE_ACCEPT); { String xWapProfileTagName = MmsConfig.getUaProfTagName(); String xWapProfileUrl = MmsConfig.getUaProfUrl(); if (xWapProfileUrl != null) { if (Log.isLoggable(LogTag.TRANSACTION, Log.VERBOSE)) { Log.d(LogTag.TRANSACTION, "[HttpUtils] httpConn: xWapProfUrl=" + xWapProfileUrl); } req.addHeader(xWapProfileTagName, xWapProfileUrl); } } String extraHttpParams = MmsConfig.getHttpParams(); if (extraHttpParams != null) { String line1Number = ((TelephonyManager) context.getSystemService(Context.TELEPHONY_SERVICE)).getLine1Number(); String line1Key = MmsConfig.getHttpParamsLine1Key(); String paramList[] = extraHttpParams.split("\\|"); for (String paramPair : paramList) { String splitPair[] = paramPair.split(":", 2); if (splitPair.length == 2) { String name = splitPair[0].trim(); String value = splitPair[1].trim(); if (line1Key != null) { value = value.replace(line1Key, line1Number); } if (!TextUtils.isEmpty(name) && !TextUtils.isEmpty(value)) { req.addHeader(name, value); } } } } req.addHeader(HDR_KEY_ACCEPT_LANGUAGE, HDR_VALUE_ACCEPT_LANGUAGE); HttpResponse response = client.execute(target, req); StatusLine status = response.getStatusLine(); if (status.getStatusCode() != 200) { throw new IOException("HTTP error: " + status.getReasonPhrase()); } HttpEntity entity = response.getEntity(); byte[] body = null; if (entity != null) { try { if (entity.getContentLength() > 0) { body = new byte[(int) entity.getContentLength()]; DataInputStream dis = new DataInputStream(entity.getContent()); try { dis.readFully(body); } finally { try { dis.close(); } catch (IOException e) { Log.e(TAG, "Error closing input stream: " + e.getMessage()); } } } } finally { if (entity != null) { entity.consumeContent(); } } } return body; } catch (URISyntaxException e) { handleHttpConnectionException(e, url); } catch (IllegalStateException e) { handleHttpConnectionException(e, url); } catch (IllegalArgumentException e) { handleHttpConnectionException(e, url); } catch (SocketException e) { handleHttpConnectionException(e, url); } catch (Exception e) { handleHttpConnectionException(e, url); } finally { if (client != null) { client.close(); } } return null; }
Code Sample 2:
@Override public void onCreate(Bundle savedInstanceState) { super.onCreate(savedInstanceState); setContentView(R.layout.listview); HttpGet request = new HttpGet(SERVICE_URI + "/json/getroutes/1"); request.setHeader("Accept", "application/json"); request.setHeader("Content-type", "application/json"); DefaultHttpClient httpClient = new DefaultHttpClient(); String theString = new String(""); try { HttpResponse response = httpClient.execute(request); HttpEntity responseEntity = response.getEntity(); InputStream stream = responseEntity.getContent(); BufferedReader reader = new BufferedReader(new InputStreamReader(stream)); Vector<String> vectorOfStrings = new Vector<String>(); String tempString = new String(); String tempStringAgent = new String(); String tempStringClient = new String(); String tempStringRoute = new String(); String tempStringZone = new String(); StringBuilder builder = new StringBuilder(); String line; while ((line = reader.readLine()) != null) { builder.append(line); } stream.close(); theString = builder.toString(); JSONObject json = new JSONObject(theString); Log.i("_GetClient_", "<jsonobject>\n" + json.toString() + "\n</jsonobject>"); this.dm = new DataManipulator(this); JSONArray nameArray = json.getJSONArray("GetRoutesByAgentResult"); for (int i = 0; i < nameArray.length(); i++) { tempStringAgent = nameArray.getJSONObject(i).getString("Agent"); tempStringClient = nameArray.getJSONObject(i).getString("Client"); tempStringRoute = nameArray.getJSONObject(i).getString("Route"); tempStringZone = nameArray.getJSONObject(i).getString("Zone"); Log.i("_GetClient_", "<Agent" + i + ">" + tempStringAgent + "</Agent" + i + ">\n"); Log.i("_GetClient_", "<Client" + i + ">" + tempStringClient + "</Client" + i + ">\n"); Log.i("_GetClient_", "<Route" + i + ">" + tempStringRoute + "</Route" + i + ">\n"); Log.i("_GetClient_", "<Zone" + i + ">" + tempStringZone + "</Zone" + i + ">\n"); tempString = nameArray.getJSONObject(i).getString("Client") + "\n" + nameArray.getJSONObject(i).getString("Route") + "\n" + nameArray.getJSONObject(i).getString("Zone"); vectorOfStrings.add(new String(tempString)); } int orderCount = vectorOfStrings.size(); String[] orderTimeStamps = new String[orderCount]; vectorOfStrings.copyInto(orderTimeStamps); setListAdapter(new ArrayAdapter<String>(this, android.R.layout.simple_list_item_1, orderTimeStamps)); } catch (Exception e) { e.printStackTrace(); } }
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Code Sample 1:
private static void readAndRewrite(File inFile, File outFile) throws IOException { ImageInputStream iis = ImageIO.createImageInputStream(new BufferedInputStream(new FileInputStream(inFile))); DcmParser dcmParser = DcmParserFactory.getInstance().newDcmParser(iis); Dataset ds = DcmObjectFactory.getInstance().newDataset(); dcmParser.setDcmHandler(ds.getDcmHandler()); dcmParser.parseDcmFile(null, Tags.PixelData); PixelDataReader pdReader = pdFact.newReader(ds, iis, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR()); System.out.println("reading " + inFile + "..."); pdReader.readPixelData(false); ImageOutputStream out = ImageIO.createImageOutputStream(new BufferedOutputStream(new FileOutputStream(outFile))); DcmEncodeParam dcmEncParam = DcmEncodeParam.IVR_LE; ds.writeDataset(out, dcmEncParam); ds.writeHeader(out, dcmEncParam, Tags.PixelData, dcmParser.getReadVR(), dcmParser.getReadLength()); System.out.println("writing " + outFile + "..."); PixelDataWriter pdWriter = pdFact.newWriter(pdReader.getPixelDataArray(), false, ds, out, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR()); pdWriter.writePixelData(); out.flush(); out.close(); System.out.println("done!"); }
Code Sample 2:
public void xtest2() throws Exception { InputStream input1 = new FileInputStream("C:/Documentos/j931_01.pdf"); InputStream input2 = new FileInputStream("C:/Documentos/j931_02.pdf"); InputStream tmp = new ITextManager().merge(new InputStream[] { input1, input2 }); FileOutputStream output = new FileOutputStream("C:/temp/split.pdf"); IOUtils.copy(tmp, output); input1.close(); input2.close(); tmp.close(); output.close(); }
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11
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Code Sample 1:
private static void doCopyFile(File srcFile, File destFile, boolean preserveFileDate) throws IOException { if (destFile.exists() && destFile.isDirectory()) { throw new IOException("Destination '" + destFile + "' exists but is a directory"); } FileInputStream input = new FileInputStream(srcFile); try { FileOutputStream output = new FileOutputStream(destFile); try { IOUtils.copy(input, output); } finally { IOUtils.closeQuietly(output); } } finally { IOUtils.closeQuietly(input); } if (srcFile.length() != destFile.length()) { throw new IOException("Failed to copy full contents from '" + srcFile + "' to '" + destFile + "'"); } if (preserveFileDate) { destFile.setLastModified(srcFile.lastModified()); } }
Code Sample 2:
private void copyFile(File in, File out) throws IOException { FileChannel sourceChannel = new FileInputStream(in).getChannel(); FileChannel destinationChannel = new FileOutputStream(out).getChannel(); sourceChannel.transferTo(0, sourceChannel.size(), destinationChannel); sourceChannel.close(); destinationChannel.close(); }
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Code Sample 1:
public void copyTo(Bean bean, OutputStream out, int offset, int length) throws Exception { BeanInfo beanInfo = getBeanInfo(bean.getClass()); validate(bean, beanInfo, "copyTo"); if (blobCache != null && length < MAX_BLOB_CACHE_LENGHT) { byte[] bytes = null; synchronized (this) { String key = makeUniqueKey(bean, beanInfo, offset, length); if (blobCache.contains(key)) bytes = (byte[]) blobCache.get(key); else blobCache.put(key, bytes = toByteArray(bean, offset, length, beanInfo)); } InputStream in = new ByteArrayInputStream(bytes); IOUtils.copy(in, out); in.close(); } else { jdbcManager.queryScript(beanInfo.getBlobInfo(jdbcManager.getDb()).getReadScript(), bean, new JdbcOutputStreamRowMapper(out, offset, length)); } }
Code Sample 2:
@Override public String fetchElectronicEdition(Publication pub) { final String url = baseURL + pub.getKey() + ".html"; logger.info("fetching pub ee from local cache at: " + url); HttpMethod method = null; String responseBody = ""; method = new GetMethod(url); method.setFollowRedirects(true); try { if (StringUtils.isNotBlank(method.getURI().getScheme())) { InputStream is = null; StringWriter writer = new StringWriter(); try { client.executeMethod(method); Header contentType = method.getResponseHeader("Content-Type"); if (contentType != null && StringUtils.isNotBlank(contentType.getValue()) && contentType.getValue().indexOf("text/html") >= 0) { is = method.getResponseBodyAsStream(); IOUtils.copy(is, writer); responseBody = writer.toString(); } else { logger.info("ignoring non-text/html response from page: " + url + " content-type:" + contentType); } } catch (HttpException he) { logger.error("Http error connecting to '" + url + "'"); logger.error(he.getMessage()); } catch (IOException ioe) { logger.error("Unable to connect to '" + url + "'"); } finally { IOUtils.closeQuietly(is); IOUtils.closeQuietly(writer); } } } catch (URIException e) { logger.error(e); } finally { method.releaseConnection(); } return responseBody; }
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11
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Code Sample 1:
public static void copyFile(File in, File out) throws IOException { FileChannel inChannel = new FileInputStream(in).getChannel(); FileChannel outChannel = new FileOutputStream(out).getChannel(); try { inChannel.transferTo(0, inChannel.size(), outChannel); } catch (IOException e) { throw e; } finally { if (inChannel != null) inChannel.close(); if (outChannel != null) outChannel.close(); } }
Code Sample 2:
public String postEvent(EventDocument eventDoc, Map attachments) { if (eventDoc == null || eventDoc.getEvent() == null) return null; if (queue == null) { sendEvent(eventDoc, attachments); return eventDoc.getEvent().getEventId(); } if (attachments != null) { Iterator iter = attachments.entrySet().iterator(); while (iter.hasNext()) { Map.Entry entry = (Map.Entry) iter.next(); if (entry.getValue() instanceof DataHandler) { File file = new File(attachmentStorge + "/" + GuidUtil.generate() + entry.getKey()); try { IOUtils.copy(((DataHandler) entry.getValue()).getInputStream(), new FileOutputStream(file)); entry.setValue(file); } catch (IOException err) { err.printStackTrace(); } } } } InternalEventObject eventObj = new InternalEventObject(); eventObj.setEventDocument(eventDoc); eventObj.setAttachments(attachments); eventObj.setSessionContext(SessionContextUtil.getCurrentContext()); eventDoc.getEvent().setEventId(GuidUtil.generate()); getQueue().post(eventObj); return eventDoc.getEvent().getEventId(); }
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11
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Code Sample 1:
public static void copyFile(File in, File out) throws IOException { FileChannel inChannel = new FileInputStream(in).getChannel(); FileChannel outChannel = new FileOutputStream(out).getChannel(); try { inChannel.transferTo(0, inChannel.size(), outChannel); } catch (IOException e) { throw e; } finally { if (inChannel != null) inChannel.close(); if (outChannel != null) outChannel.close(); } }
Code Sample 2:
private void copyFromStdin(Path dst, FileSystem dstFs) throws IOException { if (dstFs.isDirectory(dst)) { throw new IOException("When source is stdin, destination must be a file."); } if (dstFs.exists(dst)) { throw new IOException("Target " + dst.toString() + " already exists."); } FSDataOutputStream out = dstFs.create(dst); try { IOUtils.copyBytes(System.in, out, getConf(), false); } finally { out.close(); } }
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11
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Code Sample 1:
public static void main(String[] args) throws ParseException, FileNotFoundException, IOException { InputStream input = new BufferedInputStream(UpdateLanguages.class.getResourceAsStream("definition_template")); Translator t = new Translator(input, "UTF8"); Node template = Translator.Start(); File langs = new File("support/support/translate/languages"); for (File f : langs.listFiles()) { if (f.getName().endsWith(".lng")) { input = new BufferedInputStream(new FileInputStream(f)); try { Translator.ReInit(input, "UTF8"); } catch (java.lang.NullPointerException e) { new Translator(input, "UTF8"); } Node newFile = Translator.Start(); ArrayList<Addition> additions = new ArrayList<Addition>(); syncKeys(template, newFile, additions); ArrayList<String> fileLines = new ArrayList<String>(); Scanner scanner = new Scanner(new BufferedReader(new FileReader(f))); while (scanner.hasNextLine()) { fileLines.add(scanner.nextLine()); } int offset = 0; for (Addition a : additions) { System.out.println("Key added " + a + " to " + f.getName()); if (a.afterLine < 0 || a.afterLine >= fileLines.size()) { fileLines.add(a.getAddition(0)); } else { fileLines.add(a.afterLine + (offset++) + 1, a.getAddition(0)); } } f.delete(); Writer writer = new BufferedWriter(new FileWriter(f)); for (String s : fileLines) writer.write(s + "\n"); writer.close(); System.out.println("Language " + f.getName() + " had " + additions.size() + " additions"); } } File defFile = new File(langs, "language.lng"); defFile.delete(); defFile.createNewFile(); InputStream copyStream = new BufferedInputStream(UpdateLanguages.class.getResourceAsStream("definition_template")); OutputStream out = new BufferedOutputStream(new FileOutputStream(defFile)); int c = 0; while ((c = copyStream.read()) >= 0) out.write(c); out.close(); System.out.println("Languages updated."); }
Code Sample 2:
public void writeFile(OutputStream outputStream) throws IOException { InputStream inputStream = null; if (file != null) { try { inputStream = new FileInputStream(file); IOUtils.copy(inputStream, outputStream); } finally { if (inputStream != null) { IOUtils.closeQuietly(inputStream); } } } }
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Code Sample 1:
public static boolean joinFiles(File dest, Collection<File> sources) { FileInputStream fis = null; FileOutputStream fos = null; boolean rv = false; byte[] buf = new byte[1000000]; int bytesRead = 0; if (!dest.getParentFile().exists()) dest.getParentFile().mkdirs(); try { fos = new FileOutputStream(dest); for (File source : sources) { fis = new FileInputStream(source); while ((bytesRead = fis.read(buf)) > 0) fos.write(buf, 0, bytesRead); fis.close(); fis = null; } fos.close(); fos = null; rv = true; } catch (Throwable t) { throw new ApplicationException("error joining files to " + dest.getAbsolutePath(), t); } finally { if (fis != null) { try { fis.close(); } catch (Exception e) { } fis = null; } if (fos != null) { try { fos.close(); } catch (Exception e) { } fos = null; } } return rv; }
Code Sample 2:
public static boolean encodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.ENCODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; }
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Code Sample 1:
public static void main(String[] args) { FTPClient client = new FTPClient(); String sFTP = "ftp.servidor.com"; String sUser = "usuario"; String sPassword = "pasword"; try { System.out.println("Conectandose a " + sFTP); client.connect(sFTP); client.login(sUser, sPassword); System.out.println(client.printWorkingDirectory()); client.changeWorkingDirectory("\\httpdocs"); System.out.println(client.printWorkingDirectory()); System.out.println("Desconectando."); client.logout(); client.disconnect(); } catch (IOException ioe) { ioe.printStackTrace(); } }
Code Sample 2:
public ManageUsers() { if (System.getProperty("user.home") != null) { dataFile = new File(System.getProperty("user.home") + File.separator + "MyRx" + File.separator + "MyRx.dat"); File dataFileDir = new File(System.getProperty("user.home") + File.separator + "MyRx"); dataFileDir.mkdirs(); } else { dataFile = new File("MyRx.dat"); } try { dataFile.createNewFile(); } catch (IOException e1) { logger.error(e1); JOptionPane.showMessageDialog(Menu.getMainMenu(), e1.getMessage(), "Error", JOptionPane.ERROR_MESSAGE); } File oldDataFile = new File("MyRx.dat"); if (oldDataFile.exists()) { FileChannel src = null, dst = null; try { src = new FileInputStream(oldDataFile.getAbsolutePath()).getChannel(); dst = new FileOutputStream(dataFile.getAbsolutePath()).getChannel(); dst.transferFrom(src, 0, src.size()); if (!oldDataFile.delete()) { oldDataFile.deleteOnExit(); } } catch (FileNotFoundException e) { logger.error(e); JOptionPane.showMessageDialog(Menu.getMainMenu(), e.getMessage(), "Error", JOptionPane.ERROR_MESSAGE); } catch (IOException e) { logger.error(e); JOptionPane.showMessageDialog(Menu.getMainMenu(), e.getMessage(), "Error", JOptionPane.ERROR_MESSAGE); } finally { try { src.close(); dst.close(); } catch (IOException e) { logger.error(e); } } } }
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Code Sample 1:
private File uploadFile(InputStream inputStream, File file) { FileOutputStream fileOutputStream = null; try { File dir = file.getParentFile(); if (!dir.exists()) { dir.mkdirs(); } FileUtils.touch(file); fileOutputStream = new FileOutputStream(file); IOUtils.copy(inputStream, fileOutputStream); } catch (IOException e) { throw new FileOperationException("Failed to save uploaded image", e); } finally { try { if (fileOutputStream != null) { fileOutputStream.close(); } } catch (IOException e) { LOGGER.warn("Failed to close resources on uploaded file", e); } } return file; }
Code Sample 2:
private boolean checkTimestamp(File timestamp, URL url) { try { if (timestamp.exists()) { FileReader reader = null; Date dateLocal = null; try { reader = new FileReader(timestamp); StringWriter tmp = new StringWriter(); IOUtils.copy(reader, tmp); dateLocal = this.FORMAT.parse(tmp.toString()); } catch (ParseException e) { timestamp.delete(); } catch (IOException e) { } finally { IOUtils.closeQuietly(reader); } if (dateLocal != null) { try { URLConnection conn = url.openConnection(); Date date = this.FORMAT.parse(this.FORMAT.format(new Date(conn.getLastModified()))); return (date.compareTo(dateLocal) == 0); } catch (IOException e) { } } } } catch (Throwable t) { } return false; }
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Code Sample 1:
public static boolean encodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.ENCODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; }
Code Sample 2:
public static final void copyFile(File source, File destination) throws IOException { FileChannel sourceChannel = new FileInputStream(source).getChannel(); FileChannel targetChannel = new FileOutputStream(destination).getChannel(); sourceChannel.transferTo(0, sourceChannel.size(), targetChannel); sourceChannel.close(); targetChannel.close(); }
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Code Sample 1:
public static void copy(File from, File to, CopyMode mode) throws IOException { if (!from.exists()) { IllegalArgumentException e = new IllegalArgumentException("Source doesn't exist: " + from.getCanonicalFile()); log.throwing("Utils", "copy", e); throw e; } if (from.isFile()) { if (!to.canWrite()) { IllegalArgumentException e = new IllegalArgumentException("Cannot write to target location: " + to.getCanonicalFile()); log.throwing("Utils", "copy", e); throw e; } } if (to.exists()) { if ((mode.val & CopyMode.OverwriteFile.val) != CopyMode.OverwriteFile.val) { IllegalArgumentException e = new IllegalArgumentException("Target already exists: " + to.getCanonicalFile()); log.throwing("Utils", "copy", e); throw e; } if (to.isDirectory()) { if ((mode.val & CopyMode.OverwriteFolder.val) != CopyMode.OverwriteFolder.val) { IllegalArgumentException e = new IllegalArgumentException("Target is a folder: " + to.getCanonicalFile()); log.throwing("Utils", "copy", e); throw e; } else to.delete(); } } if (from.isFile()) { FileChannel in = new FileInputStream(from).getChannel(); FileLock inLock = in.lock(); FileChannel out = new FileOutputStream(to).getChannel(); FileLock outLock = out.lock(); try { in.transferTo(0, (int) in.size(), out); } finally { inLock.release(); outLock.release(); in.close(); out.close(); } } else { to.mkdirs(); File[] contents = to.listFiles(); for (File file : contents) { File newTo = new File(to.getCanonicalPath() + "/" + file.getName()); copy(file, newTo, mode); } } }
Code Sample 2:
public static File extract(File source, String filename, File target) { if (source.exists() == false || filename == null || filename.trim().length() < 1 || target == null) return null; boolean isDirectory = (filename.lastIndexOf("/") == filename.length() - 1); try { Map contents = (Map) jarContents.get(source.getPath()); if (contents == null) { contents = new HashMap(); jarContents.put(source.getPath(), contents); ZipInputStream input = new ZipInputStream(new FileInputStream(source)); ZipEntry zipEntry = null; while ((zipEntry = input.getNextEntry()) != null) { if (zipEntry.isDirectory()) continue; contents.put(zipEntry.getName(), zipEntry); } input.close(); } if (isDirectory) { Iterator it = contents.keySet().iterator(); while (it.hasNext()) { String next = (String) it.next(); if (next.startsWith(filename)) { ZipEntry zipEntry = (ZipEntry) contents.get(next); int n = filename.length(); File newTarget = new File(target, zipEntry.getName().substring(n)); extract(source, next, newTarget); } } return target; } ZipEntry entry = (ZipEntry) contents.get(filename); ZipFile input = new ZipFile(source); InputStream in = input.getInputStream(entry); target.getParentFile().mkdirs(); int bytesRead; byte[] buffer = new byte[1024]; FileOutputStream output = new FileOutputStream(target); while ((bytesRead = in.read(buffer)) != -1) output.write(buffer, 0, bytesRead); output.close(); input.close(); return target; } catch (Exception ex) { ex.printStackTrace(); } return null; }
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Code Sample 1:
public static String encodePassword(String password) { try { MessageDigest messageDiegest = MessageDigest.getInstance("SHA-1"); messageDiegest.update(password.getBytes("UTF-8")); return Base64.encodeToString(messageDiegest.digest(), false); } catch (NoSuchAlgorithmException e) { log.error("Exception while encoding password"); throw new Error(e); } catch (UnsupportedEncodingException e) { log.error("Exception while encoding password"); throw new Error(e); } }
Code Sample 2:
public static String getEncodedPassword(String buff) { if (buff == null) return null; String t = new String(); try { MessageDigest md = MessageDigest.getInstance("MD5"); md.update(buff.getBytes()); byte[] r = md.digest(); for (int i = 0; i < r.length; i++) { t += toHexString(r[i]); } } catch (Exception e) { e.printStackTrace(); } return t; }
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Code Sample 1:
private static void copyContent(final File srcFile, final File dstFile, final boolean gzipContent) throws IOException { final File dstFolder = dstFile.getParentFile(); dstFolder.mkdirs(); if (!dstFolder.exists()) { throw new RuntimeException("Unable to create the folder " + dstFolder.getAbsolutePath()); } final InputStream in = new FileInputStream(srcFile); OutputStream out = new FileOutputStream(dstFile); if (gzipContent) { out = new GZIPOutputStream(out); } try { final byte[] buffer = new byte[1024]; int read; while ((read = in.read(buffer)) != -1) { out.write(buffer, 0, read); } } finally { in.close(); out.close(); } }
Code Sample 2:
private static void copyFile(File src, File dst) throws IOException { FileChannel in = new FileInputStream(src).getChannel(); FileChannel out = new FileOutputStream(dst).getChannel(); in.transferTo(0, in.size(), out); in.close(); out.close(); }
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Code Sample 1:
@Override protected void doGet(HttpServletRequest req, HttpServletResponse resp) throws ServletException, IOException { String pathInfo = req.getPathInfo(); String pluginPathInfo = pathInfo.substring(prefix.length()); String gwtPathInfo = pluginPathInfo.substring(pluginKey.length() + 1); String clPath = CLASSPATH_PREFIX + gwtPathInfo; InputStream input = cl.getResourceAsStream(clPath); if (input != null) { try { OutputStream output = resp.getOutputStream(); IOUtils.copy(input, output); } finally { input.close(); } } else { resp.sendError(HttpServletResponse.SC_NOT_FOUND); } }
Code Sample 2:
public static void copyFile(File source, File destination) { if (!source.exists()) { return; } if ((destination.getParentFile() != null) && (!destination.getParentFile().exists())) { destination.getParentFile().mkdirs(); } try { FileChannel srcChannel = new FileInputStream(source).getChannel(); FileChannel dstChannel = new FileOutputStream(destination).getChannel(); dstChannel.transferFrom(srcChannel, 0, srcChannel.size()); srcChannel.close(); dstChannel.close(); } catch (IOException ioe) { ioe.printStackTrace(); } }
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Code Sample 1:
public static String encrypt(String plaintext) throws Exception { String algorithm = XML.get("security.algorithm"); if (algorithm == null) algorithm = "SHA-1"; MessageDigest md = MessageDigest.getInstance(algorithm); md.update(plaintext.getBytes("UTF-8")); return new BASE64Encoder().encode(md.digest()); }
Code Sample 2:
public ClientDTO changePassword(String pMail, String pMdp) { Client vClientBean = null; ClientDTO vClientDTO = null; vClientBean = mClientDao.getClient(pMail); if (vClientBean != null) { MessageDigest vMd5Instance; try { vMd5Instance = MessageDigest.getInstance("MD5"); vMd5Instance.reset(); vMd5Instance.update(pMdp.getBytes()); byte[] vDigest = vMd5Instance.digest(); BigInteger vBigInt = new BigInteger(1, vDigest); String vHashPassword = vBigInt.toString(16); vClientBean.setMdp(vHashPassword); vClientDTO = BeanToDTO.getInstance().createClientDTO(vClientBean); } catch (NoSuchAlgorithmException e) { e.printStackTrace(); } } return vClientDTO; }
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Code Sample 1:
private void loadMascotLibrary() { if (isMascotLibraryLoaded) return; try { boolean isLinux = false; boolean isAMD64 = false; String mascotLibraryFile; if (Configurator.getOSName().toLowerCase().contains("linux")) { isLinux = true; } if (Configurator.getOSArch().toLowerCase().contains("amd64")) { isAMD64 = true; } if (isLinux) { if (isAMD64) { mascotLibraryFile = "libmsparserj-64.so"; } else { mascotLibraryFile = "libmsparserj-32.so"; } } else { if (isAMD64) { mascotLibraryFile = "msparserj-64.dll"; } else { mascotLibraryFile = "msparserj-32.dll"; } } logger.warn("Using: " + mascotLibraryFile); URL mascot_lib = MascotDAO.class.getClassLoader().getResource(mascotLibraryFile); if (mascot_lib != null) { logger.debug("Mascot library URL: " + mascot_lib); tmpMascotLibraryFile = File.createTempFile("libmascot.so.", ".tmp", new File(System.getProperty("java.io.tmpdir"))); InputStream in = mascot_lib.openStream(); OutputStream out = new FileOutputStream(tmpMascotLibraryFile); IOUtils.copy(in, out); in.close(); out.close(); System.load(tmpMascotLibraryFile.getAbsolutePath()); isMascotLibraryLoaded = true; } else { throw new ConverterException("Could not load Mascot Library for system: " + Configurator.getOSName() + Configurator.getOSArch()); } } catch (IOException e) { throw new ConverterException("Error loading Mascot library: " + e.getMessage(), e); } }
Code Sample 2:
public void invoke(InputStream is) throws AgentException { try { addHeader("Content-Type", "application/zip"); addHeader("Content-Length", String.valueOf(is.available())); connection.setDoOutput(true); connection.connect(); OutputStream os = connection.getOutputStream(); boolean success = false; try { IOUtils.copy(is, os); success = true; } finally { try { os.flush(); os.close(); } catch (IOException x) { if (success) throw x; } } connection.disconnect(); if (connection.getResponseCode() != HttpURLConnection.HTTP_OK) { throw new AgentException("Failed to execute REST call at " + connection.getURL() + ": " + connection.getResponseCode() + " " + connection.getResponseMessage()); } } catch (ConnectException e) { throw new AgentException("Failed to connect to beehive at " + connection.getURL()); } catch (IOException e) { throw new AgentException("Failed to connect to beehive", e); } }
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Code Sample 1:
private void runGetVendorProfile() { DataStorage.clearVendorProfile(); GenericUrl url = new GoogleUrl(EnterpriseMarketplaceUrl.generateVendorProfileUrl()); VendorProfile vendorProfile = null; try { HttpRequest request = requestFactory.buildGetRequest(url); request.addParser(jsonHttpParser); request.readTimeout = readTimeout; HttpResponse response = request.execute(); vendorProfile = response.parseAs(VendorProfile.class); if (vendorProfile != null && vendorProfile.vendorId != null && vendorProfile.email != null && !StringUtilities.isEmpty(vendorProfile.email)) { DataStorage.setVendorProfile(vendorProfile); operationStatus = true; } response.getContent().close(); } catch (IOException e) { AppsMarketplacePluginLog.logError(e); } }
Code Sample 2:
Object execute(String method, Vector params) throws XmlRpcException, IOException { fault = false; long now = 0; if (XmlRpc.debug) { System.err.println("Client calling procedure '" + method + "' with parameters " + params); now = System.currentTimeMillis(); } try { ByteArrayOutputStream bout = new ByteArrayOutputStream(); if (buffer == null) { buffer = new ByteArrayOutputStream(); } else { buffer.reset(); } XmlWriter writer = new XmlWriter(buffer); writeRequest(writer, method, params); writer.flush(); byte[] request = buffer.toByteArray(); URLConnection con = url.openConnection(); con.setDoInput(true); con.setDoOutput(true); con.setUseCaches(false); con.setAllowUserInteraction(false); con.setRequestProperty("Content-Length", Integer.toString(request.length)); con.setRequestProperty("Content-Type", "text/xml"); if (auth != null) { con.setRequestProperty("Authorization", "Basic " + auth); } OutputStream out = con.getOutputStream(); out.write(request); out.flush(); out.close(); InputStream in = con.getInputStream(); parse(in); } catch (Exception x) { if (XmlRpc.debug) { x.printStackTrace(); } throw new IOException(x.getMessage()); } if (fault) { XmlRpcException exception = null; try { Hashtable f = (Hashtable) result; String faultString = (String) f.get("faultString"); int faultCode = Integer.parseInt(f.get("faultCode").toString()); exception = new XmlRpcException(faultCode, faultString.trim()); } catch (Exception x) { throw new XmlRpcException(0, "Invalid fault response"); } throw exception; } if (XmlRpc.debug) { System.err.println("Spent " + (System.currentTimeMillis() - now) + " in request"); } return result; }
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Code Sample 1:
private void checkForLatestVersion() { log(Color.BLUE, "Checking for latest version."); try { double LatestVersion = 0.0; URL url = new URL("http://www.powerbot.org/vb/showthread.php?t=723144"); URLConnection urlc = url.openConnection(); BufferedReader bf = new BufferedReader(new InputStreamReader(urlc.getInputStream())); String CurrentLine; while ((CurrentLine = bf.readLine()) != null) { if (CurrentLine.contains("<pre class=\"bbcode_code\"style=\"height:48px;\"><i>Current version")) { for (String s : CurrentLine.split(" ")) { try { LatestVersion = Double.parseDouble(s); } catch (NumberFormatException nfe) { } } } } double CurrentVersion = getClass().getAnnotation(ScriptManifest.class).version(); String Message = LatestVersion < CurrentVersion ? ", you should update to the latest version!" : ", you have the latest version of this script."; log(LatestVersion < CurrentVersion ? Color.RED : Color.BLUE, "Latest version available : " + LatestVersion + Message); } catch (IOException ioe) { log(Color.RED, "Couldn't retreive latest version due to a connection issue!"); } catch (NumberFormatException nfe) { log(Color.RED, "Couldn't reveice latest version; no version were available on PowerBot website!."); } catch (Exception e) { log(Color.RED, "Couldn't retreive latest version due to an unknown reason!"); } }
Code Sample 2:
public ByteArrayOutputStream download(final String contentUuid) throws WebServiceClientException { try { URL url = new URL(getPath("/download/" + contentUuid)); URLConnection connection = url.openConnection(); InputStream inputStream = connection.getInputStream(); ByteArrayOutputStream outputStream = new ByteArrayOutputStream(); int c; while ((c = inputStream.read()) != -1) { outputStream.write(c); } inputStream.close(); return outputStream; } catch (Exception ex) { throw new WebServiceClientException("Could not download content from web service.", ex); } }
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Code Sample 1:
private String fetchContent() throws IOException { BufferedReader reader = new BufferedReader(new InputStreamReader(url.openStream())); StringBuffer buf = new StringBuffer(); String str; while ((str = reader.readLine()) != null) { buf.append(str); } return buf.toString(); }
Code Sample 2:
public static String getPasswordHash(String password) { MessageDigest md; try { md = MessageDigest.getInstance("MD5"); } catch (NoSuchAlgorithmException e) { throw new IllegalArgumentException(e); } md.update(password.getBytes()); byte[] digest = md.digest(); BigInteger i = new BigInteger(1, digest); String hash = i.toString(16); while (hash.length() < 32) { hash = "0" + hash; } return hash; }
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Code Sample 1:
public static boolean decodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.DECODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; }
Code Sample 2:
public static void refreshSession(int C_ID) { Connection con = null; try { con = getConnection(); PreparedStatement updateLogin = con.prepareStatement("UPDATE customer SET c_login = NOW(), c_expiration = DATE_ADD(NOW(), INTERVAL 2 HOUR) WHERE c_id = ?"); updateLogin.setInt(1, C_ID); updateLogin.executeUpdate(); con.commit(); updateLogin.close(); returnConnection(con); } catch (java.lang.Exception ex) { try { con.rollback(); ex.printStackTrace(); } catch (Exception se) { System.err.println("Transaction rollback failed."); } } }
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Code Sample 1:
public static boolean writeFileByBinary(InputStream pIs, File pFile, boolean pAppend) { boolean flag = false; try { FileOutputStream fos = new FileOutputStream(pFile, pAppend); IOUtils.copy(pIs, fos); fos.flush(); fos.close(); pIs.close(); flag = true; } catch (Exception e) { LOG.error("将字节流写入�?" + pFile.getName() + "出现异常�?", e); } return flag; }
Code Sample 2:
public static void copyFile(File source, File dest) throws IOException { FileChannel in = null, out = null; try { in = new FileInputStream(source).getChannel(); out = new FileOutputStream(dest).getChannel(); in.transferTo(0, in.size(), out); } catch (FileNotFoundException fnfe) { fnfe.printStackTrace(); } finally { if (in != null) in.close(); if (out != null) out.close(); } }
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Code Sample 1:
public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFormat.ACRNEMA_STREAM) { System.out.println("\n" + src + ": not an ACRNEMA stream!"); return; } p.parseDcmFile(format, Tags.PixelData); if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) { System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert"); return; } boolean hasPixelData = p.getReadTag() == Tags.PixelData; boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12; int pxlen = p.getReadLength(); if (hasPixelData) { if (inflate) { ds.putUS(Tags.BitsAllocated, 16); pxlen = pxlen * 4 / 3; } if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) { System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert"); return; } } ds.putUI(Tags.StudyInstanceUID, uid(studyUID)); ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID)); ds.putUI(Tags.SOPInstanceUID, uid(instUID)); ds.putUI(Tags.SOPClassUID, classUID); if (!ds.contains(Tags.NumberOfSamples)) { ds.putUS(Tags.NumberOfSamples, 1); } if (!ds.contains(Tags.PhotometricInterpretation)) { ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2"); } if (fmi) { ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian)); } OutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); try { } finally { ds.writeFile(out, encodeParam()); if (hasPixelData) { if (!skipGroupLen) { out.write(PXDATA_GROUPLEN); int grlen = pxlen + 8; out.write((byte) grlen); out.write((byte) (grlen >> 8)); out.write((byte) (grlen >> 16)); out.write((byte) (grlen >> 24)); } out.write(PXDATA_TAG); out.write((byte) pxlen); out.write((byte) (pxlen >> 8)); out.write((byte) (pxlen >> 16)); out.write((byte) (pxlen >> 24)); } if (inflate) { int b2, b3; for (; pxlen > 0; pxlen -= 3) { out.write(in.read()); b2 = in.read(); b3 = in.read(); out.write(b2 & 0x0f); out.write(b2 >> 4 | ((b3 & 0x0f) << 4)); out.write(b3 >> 4); } } else { for (; pxlen > 0; --pxlen) { out.write(in.read()); } } out.close(); } System.out.print('.'); } finally { in.close(); } }
Code Sample 2:
public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFormat.ACRNEMA_STREAM) { System.out.println("\n" + src + ": not an ACRNEMA stream!"); return; } p.parseDcmFile(format, Tags.PixelData); if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) { System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert"); return; } boolean hasPixelData = p.getReadTag() == Tags.PixelData; boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12; int pxlen = p.getReadLength(); if (hasPixelData) { if (inflate) { ds.putUS(Tags.BitsAllocated, 16); pxlen = pxlen * 4 / 3; } if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) { System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert"); return; } } ds.putUI(Tags.StudyInstanceUID, uid(studyUID)); ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID)); ds.putUI(Tags.SOPInstanceUID, uid(instUID)); ds.putUI(Tags.SOPClassUID, classUID); if (!ds.contains(Tags.NumberOfSamples)) { ds.putUS(Tags.NumberOfSamples, 1); } if (!ds.contains(Tags.PhotometricInterpretation)) { ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2"); } if (fmi) { ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian)); } OutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); try { } finally { ds.writeFile(out, encodeParam()); if (hasPixelData) { if (!skipGroupLen) { out.write(PXDATA_GROUPLEN); int grlen = pxlen + 8; out.write((byte) grlen); out.write((byte) (grlen >> 8)); out.write((byte) (grlen >> 16)); out.write((byte) (grlen >> 24)); } out.write(PXDATA_TAG); out.write((byte) pxlen); out.write((byte) (pxlen >> 8)); out.write((byte) (pxlen >> 16)); out.write((byte) (pxlen >> 24)); } if (inflate) { int b2, b3; for (; pxlen > 0; pxlen -= 3) { out.write(in.read()); b2 = in.read(); b3 = in.read(); out.write(b2 & 0x0f); out.write(b2 >> 4 | ((b3 & 0x0f) << 4)); out.write(b3 >> 4); } } else { for (; pxlen > 0; --pxlen) { out.write(in.read()); } } out.close(); } System.out.print('.'); } finally { in.close(); } }
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Code Sample 1:
public static String getServerVersion() throws IOException { URL url; url = new URL(CHECKVERSIONURL); HttpURLConnection httpURLConnection = (HttpURLConnection) url.openConnection(); httpURLConnection.setDoInput(true); httpURLConnection.setDoOutput(false); httpURLConnection.setUseCaches(false); httpURLConnection.setRequestMethod("GET"); httpURLConnection.connect(); InputStream in = httpURLConnection.getInputStream(); ByteArrayOutputStream out = new ByteArrayOutputStream(); IOUtils.copy(in, out); out.flush(); IOUtils.closeQuietly(in); IOUtils.closeQuietly(out); String buffer; String[] lines; String version = ""; buffer = out.toString(); lines = StringUtils.split(buffer); for (int i = 0; i < lines.length; i++) { if (lines[i].startsWith("version=")) { version = lines[i].substring(8).trim(); break; } } return version; }
Code Sample 2:
public void reset(int currentPilot) { try { PreparedStatement psta = jdbc.prepareStatement("DELETE FROM component_prop " + "WHERE pilot_id = ? "); psta.setInt(1, currentPilot); psta.executeUpdate(); jdbc.commit(); } catch (SQLException e) { jdbc.rollback(); log.debug(e); } }
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Code Sample 1:
private void displayDiffResults() throws IOException { File outFile = File.createTempFile("diff", ".htm"); outFile.deleteOnExit(); FileOutputStream outStream = new FileOutputStream(outFile); BufferedWriter out = new BufferedWriter(new OutputStreamWriter(outStream)); out.write("<html><head><title>LOC Differences</title>\n" + SCRIPT + "</head>\n" + "<body bgcolor='#ffffff'>\n" + "<div onMouseOver=\"window.defaultStatus='Metrics'\">\n"); if (addedTable.length() > 0) { out.write("<table border><tr><th>Files Added:</th>" + "<th>Add</th><th>Type</th></tr>"); out.write(addedTable.toString()); out.write("</table><br><br>"); } if (modifiedTable.length() > 0) { out.write("<table border><tr><th>Files Modified:</th>" + "<th>Base</th><th>Del</th><th>Mod</th><th>Add</th>" + "<th>Total</th><th>Type</th></tr>"); out.write(modifiedTable.toString()); out.write("</table><br><br>"); } if (deletedTable.length() > 0) { out.write("<table border><tr><th>Files Deleted:</th>" + "<th>Del</th><th>Type</th></tr>"); out.write(deletedTable.toString()); out.write("</table><br><br>"); } out.write("<table name=METRICS BORDER>\n"); if (modifiedTable.length() > 0 || deletedTable.length() > 0) { out.write("<tr><td>Base: </td><td>"); out.write(Long.toString(base)); out.write("</td></tr>\n<tr><td>Deleted: </td><td>"); out.write(Long.toString(deleted)); out.write("</td></tr>\n<tr><td>Modified: </td><td>"); out.write(Long.toString(modified)); out.write("</td></tr>\n<tr><td>Added: </td><td>"); out.write(Long.toString(added)); out.write("</td></tr>\n<tr><td>New & Changed: </td><td>"); out.write(Long.toString(added + modified)); out.write("</td></tr>\n"); } out.write("<tr><td>Total: </td><td>"); out.write(Long.toString(total)); out.write("</td></tr>\n</table></div>"); redlinesOut.close(); out.flush(); InputStream redlines = new FileInputStream(redlinesTempFile); byte[] buffer = new byte[4096]; int bytesRead; while ((bytesRead = redlines.read(buffer)) != -1) outStream.write(buffer, 0, bytesRead); outStream.write("</BODY></HTML>".getBytes()); outStream.close(); Browser.launch(outFile.toURL().toString()); }
Code Sample 2:
private void saveFile(InputStream in, String fullPath) { try { File sysfile = new File(fullPath); if (!sysfile.exists()) { sysfile.createNewFile(); } java.io.OutputStream out = new FileOutputStream(sysfile); org.apache.commons.io.IOUtils.copy(in, out); out.close(); } catch (Exception e) { e.printStackTrace(); } }
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Code Sample 1:
private void initializeTree() { InputStreamReader reader = null; BufferedReader buffReader = null; try { for (int i = 0; i < ORDER.length; i++) { int index = ORDER[i]; String indexName = index < 10 ? "0" + index : (index > 20 ? "big" : "" + index); URL url = EmptyClass.class.getResource("engchar" + indexName + ".dic"); logger.info("... Loading: " + "engchar" + indexName + ".dic = {" + url + "}"); reader = new InputStreamReader(url.openStream()); buffReader = new BufferedReader(reader); String line = null; String word = null; do { line = buffReader.readLine(); if (line != null) { boolean plural = line.endsWith("/S"); boolean forbidden = line.endsWith("/X"); if (plural) { int stringIndex = line.indexOf("/S"); word = new String(line.substring(0, stringIndex)); } else if (forbidden) { int stringIndex = line.indexOf("/X"); word = new String(line.substring(0, stringIndex)); } else { word = line.toString(); } if (tree == null) { tree = new BKTree(); } tree.insertDictionaryWord(word, plural, forbidden); } } while (line != null); } logger.debug("Loading supplemental dictionary..."); List<String> listOfWords = KSupplementalDictionaryUtil.getWords(); for (String word : listOfWords) { tree.insertDictionaryWord(word, false, false); } initialized = true; } catch (Exception exception) { logger.error("Error", exception); } finally { if (reader != null) { try { reader.close(); } catch (Exception ex) { } } if (buffReader != null) { try { buffReader.close(); } catch (Exception ex) { } } } }
Code Sample 2:
public static String makeMD5(String pin) { try { MessageDigest digest = java.security.MessageDigest.getInstance("MD5"); digest.update(pin.getBytes()); byte[] hash = digest.digest(); StringBuffer hexString = new StringBuffer(); for (int i = 0; i < hash.length; i++) { hexString.append(Integer.toHexString(0xFF & hash[i])); } return hexString.toString(); } catch (Exception e) { return null; } }
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Code Sample 1:
@Override public void actionPerformed(ActionEvent e) { if (copiedFiles_ != null) { File[] tmpFiles = new File[copiedFiles_.length]; File tmpDir = new File(Settings.getPropertyString(ConstantKeys.project_dir), "tmp/"); tmpDir.mkdirs(); for (int i = copiedFiles_.length - 1; i >= 0; i--) { Frame f = FrameManager.getInstance().getFrameAtIndex(i); try { File in = f.getFile(); File out = new File(tmpDir, f.getFile().getName()); FileChannel inChannel = new FileInputStream(in).getChannel(); FileChannel outChannel = new FileOutputStream(out).getChannel(); inChannel.transferTo(0, inChannel.size(), outChannel); if (inChannel != null) inChannel.close(); if (outChannel != null) outChannel.close(); tmpFiles[i] = out; } catch (IOException e1) { e1.printStackTrace(); } } try { FrameManager.getInstance().insertFrames(getTable().getSelectedRow(), FrameManager.INSERT_TYPE.MOVE, tmpFiles); } catch (IOException e1) { e1.printStackTrace(); } } }
Code Sample 2:
private void copy(File fin, File fout) throws IOException { FileOutputStream out = null; FileInputStream in = null; try { out = new FileOutputStream(fout); in = new FileInputStream(fin); byte[] buf = new byte[2048]; int read = in.read(buf); while (read > 0) { out.write(buf, 0, read); read = in.read(buf); } } catch (IOException _e) { throw _e; } finally { if (in != null) in.close(); if (out != null) out.close(); } }
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Code Sample 1:
public void delUser(User user) throws SQLException, IOException, ClassNotFoundException { String dbUserID; String stockSymbol; Statement stmt = con.createStatement(); try { con.setAutoCommit(false); dbUserID = user.getUserID(); if (getUser(dbUserID) != null) { ResultSet rs1 = stmt.executeQuery("SELECT userID, symbol " + "FROM UserStocks WHERE userID = '" + dbUserID + "'"); while (rs1.next()) { try { stockSymbol = rs1.getString("symbol"); delUserStocks(dbUserID, stockSymbol); } catch (SQLException ex) { throw new SQLException("Deletion of user stock holding failed: " + ex.getMessage()); } } try { stmt.executeUpdate("DELETE FROM Users WHERE " + "userID = '" + dbUserID + "'"); } catch (SQLException ex) { throw new SQLException("User deletion failed: " + ex.getMessage()); } } else throw new IOException("User not found in database - cannot delete."); try { con.commit(); } catch (SQLException ex) { throw new SQLException("Transaction commit failed: " + ex.getMessage()); } } catch (SQLException ex) { try { con.rollback(); } catch (SQLException sqx) { throw new SQLException("Transaction failed then rollback failed: " + sqx.getMessage()); } throw new SQLException("Transaction failed; was rolled back: " + ex.getMessage()); } stmt.close(); }
Code Sample 2:
public String execute(Map params, String body, RenderContext renderContext) throws MacroException { loadData(); String from = (String) params.get("from"); if (body.length() > 0 && from != null) { try { URL url; String serverUser = null; String serverPassword = null; url = new URL(semformsSettings.getZRapServerUrl() + "ZRAP_QueryProcessor.php?from=" + URLEncoder.encode(from, "utf-8") + "&query=" + URLEncoder.encode(body, "utf-8")); if (url.getUserInfo() != null) { String[] userInfo = url.getUserInfo().split(":"); if (userInfo.length == 2) { serverUser = userInfo[0]; serverPassword = userInfo[1]; } } URLConnection connection = null; InputStreamReader bf; if (serverUser != null && serverPassword != null) { connection = url.openConnection(); String encoding = new sun.misc.BASE64Encoder().encode((serverUser + ":" + serverPassword).getBytes()); connection.setRequestProperty("Authorization", "Basic " + encoding); bf = new InputStreamReader(connection.getInputStream()); } else { bf = new InputStreamReader(url.openStream()); } BufferedReader bbf = new BufferedReader(bf); String line = bbf.readLine(); String buffer = ""; while (line != null) { buffer += line; line = bbf.readLine(); } return buffer; } catch (Exception e) { e.printStackTrace(); return "ERROR:" + e.getLocalizedMessage(); } } else return "Please write an RDQL query in the macro as body and an url of the model as 'from' parameter"; }
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Code Sample 1:
public void copyFile(String source_name, String dest_name) throws IOException { File source_file = new File(source_name); File destination_file = new File(dest_name); FileInputStream source = null; FileOutputStream destination = null; byte[] buffer; int bytes_read; try { if (!source_file.exists() || !source_file.isFile()) throw new FileCopyException(QZ.PHRASES.getPhrase("25") + " " + source_name); if (!source_file.canRead()) throw new FileCopyException(QZ.PHRASES.getPhrase("26") + " " + QZ.PHRASES.getPhrase("27") + ": " + source_name); if (destination_file.exists()) { if (destination_file.isFile()) { DataInputStream in = new DataInputStream(System.in); String response; if (!destination_file.canWrite()) throw new FileCopyException(QZ.PHRASES.getPhrase("28") + " " + QZ.PHRASES.getPhrase("29") + ": " + dest_name); System.out.print(QZ.PHRASES.getPhrase("19") + dest_name + QZ.PHRASES.getPhrase("30") + ": "); System.out.flush(); response = in.readLine(); if (!response.equals("Y") && !response.equals("y")) throw new FileCopyException(QZ.PHRASES.getPhrase("31")); } else throw new FileCopyException(QZ.PHRASES.getPhrase("28") + " " + QZ.PHRASES.getPhrase("32") + ": " + dest_name); } else { File parentdir = parent(destination_file); if (!parentdir.exists()) throw new FileCopyException(QZ.PHRASES.getPhrase("28") + " " + QZ.PHRASES.getPhrase("33") + ": " + dest_name); if (!parentdir.canWrite()) throw new FileCopyException(QZ.PHRASES.getPhrase("28") + " " + QZ.PHRASES.getPhrase("34") + ": " + dest_name); } source = new FileInputStream(source_file); destination = new FileOutputStream(destination_file); buffer = new byte[1024]; while (true) { bytes_read = source.read(buffer); if (bytes_read == -1) break; destination.write(buffer, 0, bytes_read); } } finally { if (source != null) try { source.close(); } catch (IOException e) { ; } if (destination != null) try { destination.close(); } catch (IOException e) { ; } } }
Code Sample 2:
public static void copy(FileInputStream source, FileOutputStream dest) throws IOException { FileChannel in = null, out = null; try { in = source.getChannel(); out = dest.getChannel(); long size = in.size(); MappedByteBuffer buf = in.map(FileChannel.MapMode.READ_ONLY, 0, size); out.write(buf); } finally { if (in != null) in.close(); if (out != null) out.close(); } }
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Code Sample 1:
public static InputStream getResourceAsStream(String resourceName) { try { URL url = getEmbeddedFileUrl(WS_SEP + resourceName); if (url != null) { return url.openStream(); } } catch (MalformedURLException e) { GdtAndroidPlugin.getLogger().logError(e, "Failed to read stream '%s'", resourceName); } catch (IOException e) { GdtAndroidPlugin.getLogger().logError(e, "Failed to read stream '%s'", resourceName); } return null; }
Code Sample 2:
private static Result request(AbstractHttpClient client, HttpUriRequest request) throws ClientProtocolException, IOException { HttpResponse response = client.execute(request); HttpEntity entity = response.getEntity(); Result result = new Result(); result.setStatusCode(response.getStatusLine().getStatusCode()); result.setHeaders(response.getAllHeaders()); result.setCookie(assemblyCookie(client.getCookieStore().getCookies())); result.setHttpEntity(entity); return result; }
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Code Sample 1:
public FTPClient connect(String host, String userId, String password, String alias) throws IOException { FTPClient client = null; if (connections.get(alias) != null) { client = (FTPClient) connections.get(alias); if (client.isConnected() == false) { client.connect(host); } } else { client = new FTPClient(); client.connect(host); client.login(userId, password); connections.put(alias, client); } return client; }
Code Sample 2:
public boolean isPasswordCorrect(String attempt) { try { MessageDigest digest = MessageDigest.getInstance(attempt); digest.update(salt); digest.update(attempt.getBytes("UTF-8")); byte[] attemptHash = digest.digest(); return attemptHash.equals(hash); } catch (UnsupportedEncodingException ex) { Logger.getLogger(UserRecord.class.getName()).log(Level.SEVERE, null, ex); return false; } catch (NoSuchAlgorithmException ex) { Logger.getLogger(UserRecord.class.getName()).log(Level.SEVERE, null, ex); return false; } }
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Code Sample 1:
public static String SHA1(String text) throws NoSuchAlgorithmException, UnsupportedEncodingException { MessageDigest md; md = MessageDigest.getInstance("SHA-1"); byte[] sha1hash = new byte[40]; md.update(text.getBytes("iso-8859-1"), 0, text.length()); sha1hash = md.digest(); return convertToHex(sha1hash); }
Code Sample 2:
public static String MD5(String text) throws NoSuchAlgorithmException, UnsupportedEncodingException { MessageDigest md; md = MessageDigest.getInstance("MD5"); byte[] md5hash = new byte[32]; md.update(text.getBytes("iso-8859-1"), 0, text.length()); md5hash = md.digest(); return convertToHex(md5hash); }
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Code Sample 1:
public String grabId(String itemName) throws Exception { StringBuffer modified = new StringBuffer(itemName); for (int i = 0; i <= modified.length() - 1; i++) { char ichar = modified.charAt(i); if (ichar == ' ') modified = modified.replace(i, i + 1, "+"); } itemName = modified.toString(); try { URL url = new URL(searchURL + itemName); InputStream urlStream = url.openStream(); BufferedReader reader = new BufferedReader(new InputStreamReader(urlStream, "UTF-8")); while (reader.ready()) { String htmlLine = reader.readLine(); int indexOfSearchStart = htmlLine.indexOf(searchForItemId); if (indexOfSearchStart != -1) { int idStart = htmlLine.indexOf("=", indexOfSearchStart); idStart++; int idEnd = htmlLine.indexOf("'", idStart); id = htmlLine.substring(idStart, idEnd); } } if (id == "") return null; else return id; } catch (Exception ex) { System.out.println("Exception in lookup: " + ex); throw (ex); } }
Code Sample 2:
protected String contentString() { String result = null; URL url; String encoding = null; try { url = url(); URLConnection connection = url.openConnection(); connection.setDoInput(true); connection.setDoOutput(false); connection.setUseCaches(false); for (Enumeration e = bindingKeys().objectEnumerator(); e.hasMoreElements(); ) { String key = (String) e.nextElement(); if (key.startsWith("?")) { connection.setRequestProperty(key.substring(1), valueForBinding(key).toString()); } } if (connection.getContentEncoding() != null) { encoding = connection.getContentEncoding(); } if (encoding == null) { encoding = (String) valueForBinding("encoding"); } if (encoding == null) { encoding = "UTF-8"; } InputStream stream = connection.getInputStream(); byte bytes[] = ERXFileUtilities.bytesFromInputStream(stream); stream.close(); result = new String(bytes, encoding); } catch (IOException ex) { throw NSForwardException._runtimeExceptionForThrowable(ex); } return result; }
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Code Sample 1:
public static void copyFile(File src, File dest) throws IOException { if (!src.exists()) throw new IOException("File not found '" + src.getAbsolutePath() + "'"); BufferedOutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); BufferedInputStream in = new BufferedInputStream(new FileInputStream(src)); byte[] read = new byte[128]; int len = 128; while ((len = in.read(read)) > 0) out.write(read, 0, len); out.flush(); out.close(); in.close(); }
Code Sample 2:
String extractTiffFile(String path) throws IOException { ZipInputStream in = new ZipInputStream(new FileInputStream(path)); OutputStream out = new FileOutputStream(dir + TEMP_NAME); byte[] buf = new byte[1024]; int len; ZipEntry entry = in.getNextEntry(); if (entry == null) return null; String name = entry.getName(); if (!name.endsWith(".tif")) throw new IOException("This ZIP archive does not appear to contain a TIFF file"); while ((len = in.read(buf)) > 0) out.write(buf, 0, len); out.close(); in.close(); return name; }
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Code Sample 1:
public Attributes getAttributes() throws SchemaViolationException, NoSuchAlgorithmException, UnsupportedEncodingException { BasicAttributes outAttrs = new BasicAttributes(true); BasicAttribute oc = new BasicAttribute("objectclass", "inetOrgPerson"); oc.add("organizationalPerson"); oc.add("person"); outAttrs.put(oc); if (lastName != null && firstName != null) { outAttrs.put("sn", lastName); outAttrs.put("givenName", firstName); outAttrs.put("cn", firstName + " " + lastName); } else { throw new SchemaViolationException("user must have surname"); } if (password != null) { MessageDigest sha = MessageDigest.getInstance("md5"); sha.reset(); sha.update(password.getBytes("utf-8")); byte[] digest = sha.digest(); String hash = Base64.encodeBase64String(digest); outAttrs.put("userPassword", "{MD5}" + hash); } if (email != null) { outAttrs.put("mail", email); } return (Attributes) outAttrs; }
Code Sample 2:
private File Gzip(File f) throws IOException { if (f == null || !f.exists()) return null; File dest_dir = f.getParentFile(); String dest_filename = f.getName() + ".gz"; File zipfile = new File(dest_dir, dest_filename); GZIPOutputStream out = new GZIPOutputStream(new FileOutputStream(zipfile)); FileInputStream in = new FileInputStream(f); byte buf[] = new byte[1024]; int len; while ((len = in.read(buf)) > 0) out.write(buf, 0, len); out.finish(); try { in.close(); } catch (Exception e) { } try { out.close(); } catch (Exception e) { } try { f.delete(); } catch (Exception e) { } return zipfile; }
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Code Sample 1:
private void copy(File sourceFile, File destinationFile) { try { FileChannel in = new FileInputStream(sourceFile).getChannel(); FileChannel out = new FileOutputStream(destinationFile).getChannel(); try { in.transferTo(0, in.size(), out); in.close(); out.close(); } catch (IOException e) { GTLogger.getInstance().error(e); } } catch (FileNotFoundException e) { GTLogger.getInstance().error(e); } }
Code Sample 2:
protected void doPost(HttpServletRequest request, HttpServletResponse response) throws ServletException, IOException { String pathInfo = request.getPathInfo(); getLog().info("Process request " + pathInfo); if (null != pathInfo) { String pathId = getPathId(pathInfo); JobResources res = ContextUtil.getJobResource(pathId); if (null != res) { RequestType requType = getRequestType(request); ResultAccess access = new ResultAccess(res); Collection<Long> uIdColl = res.getUniqIds(); boolean isFiltered = false; { List<String> postSeqIds = getSeqList(request); if (!postSeqIds.isEmpty()) { isFiltered = true; uIdColl = access.loadIds(postSeqIds); } } try { if ((requType.equals(RequestType.FASTA)) || (requType.equals(RequestType.SWISSPROT))) { OutputStreamWriter out = null; out = new OutputStreamWriter(response.getOutputStream()); for (Long uid : uIdColl) { if (requType.equals(RequestType.FASTA)) { SwissProt sw = access.getSwissprotEntry(uid); if (null != sw) { PrintFactory.instance().print(ConvertFactory.instance().SwissProt2fasta(sw), out); } else { System.err.println("Not able to read Swissprot entry " + uid + " in project " + res.getBaseDir()); } } else if (requType.equals(RequestType.SWISSPROT)) { File swissFile = res.getSwissprotFile(uid); if (swissFile.exists()) { InputStream in = null; try { in = new FileInputStream(swissFile); IOUtils.copy(in, out); } catch (IOException e) { e.printStackTrace(); System.err.println("Problems with reading file to output stream " + swissFile); } finally { IOUtils.closeQuietly(in); } } else { System.err.println("Swissprot file does not exist: " + swissFile); } } } out.flush(); } else { if (uIdColl.size() <= 2) { isFiltered = false; uIdColl = res.getUniqIds(); } Tree tree = access.getTreeByUniquId(uIdColl); if (requType.equals(RequestType.TREE)) { response.getWriter().write(tree.toNewHampshireX()); } else if (requType.equals(RequestType.PNG)) { List<SwissProt> sp = access.getSwissprotEntriesByUniquId(uIdColl); ImageMap map = ImageFactory.instance().createProteinCard(sp, tree, true, res); response.setContentType("image/png"); response.addHeader("Content-Disposition", "filename=ProteinCards.png"); ImageFactory.instance().printPNG(map.getImage(), response.getOutputStream()); response.getOutputStream().flush(); } else if (requType.equals(RequestType.HTML)) { List<SwissProt> sp = access.getSwissprotEntriesByUniquId(uIdColl); createHtml(res, access, tree, request, response, sp, isFiltered); } } } catch (Exception e) { e.printStackTrace(); getLog().error("Problem with Request: " + pathInfo + "; type " + requType, e); } } else { getLog().error("Resource is null: " + pathId + "; path " + pathInfo); } } else { getLog().error("PathInfo is null!!!"); } }
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Code Sample 1:
public static String encrypt(String plaintext) throws Exception { String algorithm = XML.get("security.algorithm"); if (algorithm == null) algorithm = "SHA-1"; MessageDigest md = MessageDigest.getInstance(algorithm); md.update(plaintext.getBytes("UTF-8")); return new BASE64Encoder().encode(md.digest()); }
Code Sample 2:
void download() throws DownloaderException { final HttpClient client = new DefaultHttpClient(); try { final FileOutputStream fos = this.activity.openFileOutput(APK_FILENAME, Context.MODE_WORLD_READABLE); final HttpResponse response = client.execute(new HttpGet(URL)); downloadFile(response, fos); fos.close(); } catch (ClientProtocolException e) { throw new DownloaderException(e); } catch (IOException e) { throw new DownloaderException(e); } }
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Code Sample 1:
public String getDataAsString(String url) throws RuntimeException { try { String responseBody = ""; URLConnection urlc; if (!url.toUpperCase().startsWith("HTTP://") && !url.toUpperCase().startsWith("HTTPS://")) { urlc = tryOpenConnection(url); } else { urlc = new URL(url).openConnection(); } urlc.setUseCaches(false); urlc.setRequestProperty("Content-Type", "application/x-www-form-urlencoded"); urlc.setRequestProperty("User-Agent", "Mozilla/5.0 (X11; U; Linux x86_64; en-GB; rv:1.9.1.9) Gecko/20100414 Iceweasel/3.5.9 (like Firefox/3.5.9)"); urlc.setRequestProperty("Accept-Encoding", "gzip"); InputStreamReader re = new InputStreamReader(urlc.getInputStream()); BufferedReader rd = new BufferedReader(re); String line = ""; while ((line = rd.readLine()) != null) { responseBody += line; responseBody += "\n"; line = null; } rd.close(); re.close(); return responseBody; } catch (Exception e) { throw new RuntimeException(e); } }
Code Sample 2:
public void elimina(Pedido pe) throws errorSQL, errorConexionBD { System.out.println("GestorPedido.elimina()"); int id = pe.getId(); String sql; Statement stmt = null; try { gd.begin(); sql = "DELETE FROM pedido WHERE id=" + id; System.out.println("Ejecutando: " + sql); stmt = gd.getConexion().createStatement(); stmt.executeUpdate(sql); System.out.println("executeUpdate"); gd.commit(); System.out.println("commit"); stmt.close(); } catch (SQLException e) { gd.rollback(); throw new errorSQL(e.toString()); } catch (errorConexionBD e) { System.err.println("Error en GestorPedido.elimina(): " + e); } catch (errorSQL e) { System.err.println("Error en GestorPedido.elimina(): " + e); } }
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Code Sample 1:
public String stringOfUrl(String addr) throws IOException { ByteArrayOutputStream output = new ByteArrayOutputStream(); URL url = new URL(addr); IOUtils.copy(url.openStream(), output); return output.toString(); }
Code Sample 2:
private String executeHttpPreload(HttpResponse response, String xml) throws Exception { GadgetSpec spec = new GadgetSpec(GADGET_URL, xml); RecordingRequestPipeline pipeline = new RecordingRequestPipeline(response); PipelinedDataPreloader preloader = new PipelinedDataPreloader(pipeline, containerConfig); view = "profile"; Gadget gadget = new Gadget().setContext(context).setSpec(spec).setCurrentView(spec.getView("profile")); PipelinedData.Batch batch = getBatch(gadget); Collection<Callable<PreloadedData>> tasks = preloader.createPreloadTasks(context, batch); assertEquals(1, tasks.size()); assertEquals(0, pipeline.requests.size()); Collection<Object> result = tasks.iterator().next().call().toJson(); assertEquals(1, result.size()); assertEquals(1, pipeline.requests.size()); HttpRequest request = pipeline.requests.get(0); assertEquals(HTTP_REQUEST_URL, request.getUri().toString()); assertEquals("POST", request.getMethod()); assertEquals(60, request.getCacheTtl()); return result.iterator().next().toString(); }
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Code Sample 1:
public static void copyFile(File source, File destination) { if (!source.exists()) { return; } if ((destination.getParentFile() != null) && (!destination.getParentFile().exists())) { destination.getParentFile().mkdirs(); } try { FileChannel srcChannel = new FileInputStream(source).getChannel(); FileChannel dstChannel = new FileOutputStream(destination).getChannel(); dstChannel.transferFrom(srcChannel, 0, srcChannel.size()); srcChannel.close(); dstChannel.close(); } catch (IOException ioe) { ioe.printStackTrace(); } }
Code Sample 2:
static void copy(String src, String dest) throws IOException { File ifp = new File(src); File ofp = new File(dest); if (ifp.exists() == false) { throw new IOException("file '" + src + "' does not exist"); } FileInputStream fis = new FileInputStream(ifp); FileOutputStream fos = new FileOutputStream(ofp); byte[] b = new byte[1024]; while (fis.read(b) > 0) fos.write(b); fis.close(); fos.close(); }
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Code Sample 1:
private int getPage(StringBuffer ret) throws IOException { Properties sysProp; int ResponseCode = HttpURLConnection.HTTP_OK; BufferedReader br = null; try { URLConnection con = url.openConnection(); con.setDefaultUseCaches(false); con.setDoInput(true); con.setDoOutput(false); if (con instanceof HttpURLConnection) { HttpURLConnection httpcon = (HttpURLConnection) con; ResponseCode = httpcon.getResponseCode(); if (ResponseCode != httpcon.HTTP_OK) { httpcon.disconnect(); return (ResponseCode); } br = new BufferedReader(new InputStreamReader(con.getInputStream())); String line; int NumberOfLines = 0; while ((line = br.readLine()) != null) { ret.append(line + "\n"); ++NumberOfLines; } httpcon.disconnect(); } else { br = new BufferedReader(new InputStreamReader(con.getInputStream())); String line; while ((line = br.readLine()) != null) { ret.append(line + "\n"); } } } catch (IOException e) { } finally { if (br != null) br.close(); } return ResponseCode; }
Code Sample 2:
void loadSVG(String svgFileURL) { try { URL url = new URL(svgFileURL); URLConnection c = url.openConnection(); c.setRequestProperty("Accept-Encoding", "gzip"); InputStream is = c.getInputStream(); String encoding = c.getContentEncoding(); if ("gzip".equals(encoding) || "x-gzip".equals(encoding) || svgFileURL.toLowerCase().endsWith(".svgz")) { is = new GZIPInputStream(is); } is = new BufferedInputStream(is); Document svgDoc = AppletUtils.parse(is, false); if (svgDoc != null) { if (grMngr.mainView.isBlank() == null) { grMngr.mainView.setBlank(cfgMngr.backgroundColor); } SVGReader.load(svgDoc, grMngr.mSpace, true, svgFileURL); grMngr.seekBoundingBox(); grMngr.buildLogicalStructure(); ConfigManager.defaultFont = VText.getMainFont(); grMngr.reveal(); if (grMngr.previousLocations.size() == 1) { grMngr.previousLocations.removeElementAt(0); } if (grMngr.rView != null) { grMngr.rView.getGlobalView(grMngr.mSpace.getCamera(1), 100); } grMngr.cameraMoved(null, null, 0); } else { System.err.println("An error occured while loading file " + svgFileURL); } } catch (Exception ex) { grMngr.reveal(); ex.printStackTrace(); } }
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Code Sample 1:
@Override protected void doPost(HttpServletRequest req, HttpServletResponse resp) throws IOException { req.setCharacterEncoding("UTF-8"); resp.setContentType(req.getContentType()); IOUtils.copy(req.getReader(), resp.getWriter()); }
Code Sample 2:
public static String cryptografar(String senha) { try { MessageDigest md = MessageDigest.getInstance("MD5"); md.update(senha.getBytes()); BigInteger hash = new BigInteger(1, md.digest()); senha = hash.toString(16); } catch (NoSuchAlgorithmException ns) { ns.printStackTrace(); } return senha; }
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Code Sample 1:
public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFormat.ACRNEMA_STREAM) { System.out.println("\n" + src + ": not an ACRNEMA stream!"); return; } p.parseDcmFile(format, Tags.PixelData); if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) { System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert"); return; } boolean hasPixelData = p.getReadTag() == Tags.PixelData; boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12; int pxlen = p.getReadLength(); if (hasPixelData) { if (inflate) { ds.putUS(Tags.BitsAllocated, 16); pxlen = pxlen * 4 / 3; } if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) { System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert"); return; } } ds.putUI(Tags.StudyInstanceUID, uid(studyUID)); ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID)); ds.putUI(Tags.SOPInstanceUID, uid(instUID)); ds.putUI(Tags.SOPClassUID, classUID); if (!ds.contains(Tags.NumberOfSamples)) { ds.putUS(Tags.NumberOfSamples, 1); } if (!ds.contains(Tags.PhotometricInterpretation)) { ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2"); } if (fmi) { ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian)); } OutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); try { } finally { ds.writeFile(out, encodeParam()); if (hasPixelData) { if (!skipGroupLen) { out.write(PXDATA_GROUPLEN); int grlen = pxlen + 8; out.write((byte) grlen); out.write((byte) (grlen >> 8)); out.write((byte) (grlen >> 16)); out.write((byte) (grlen >> 24)); } out.write(PXDATA_TAG); out.write((byte) pxlen); out.write((byte) (pxlen >> 8)); out.write((byte) (pxlen >> 16)); out.write((byte) (pxlen >> 24)); } if (inflate) { int b2, b3; for (; pxlen > 0; pxlen -= 3) { out.write(in.read()); b2 = in.read(); b3 = in.read(); out.write(b2 & 0x0f); out.write(b2 >> 4 | ((b3 & 0x0f) << 4)); out.write(b3 >> 4); } } else { for (; pxlen > 0; --pxlen) { out.write(in.read()); } } out.close(); } System.out.print('.'); } finally { in.close(); } }
Code Sample 2:
public static boolean encodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.ENCODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; }
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Code Sample 1:
public static void doVersionCheck(View view) { view.showWaitCursor(); try { URL url = new URL(jEdit.getProperty("version-check.url")); InputStream in = url.openStream(); BufferedReader bin = new BufferedReader(new InputStreamReader(in)); String line; String version = null; String build = null; while ((line = bin.readLine()) != null) { if (line.startsWith(".version")) version = line.substring(8).trim(); else if (line.startsWith(".build")) build = line.substring(6).trim(); } bin.close(); if (version != null && build != null) { if (jEdit.getBuild().compareTo(build) < 0) newVersionAvailable(view, version, url); else { GUIUtilities.message(view, "version-check" + ".up-to-date", new String[0]); } } } catch (IOException e) { String[] args = { jEdit.getProperty("version-check.url"), e.toString() }; GUIUtilities.error(view, "read-error", args); } view.hideWaitCursor(); }
Code Sample 2:
public void loadSourceCode() { if (getResourceName() != null) { String filename = getResourceName() + ".java"; sourceCode = new String("<html><body bgcolor=\"#ffffff\"><pre>"); InputStream is; InputStreamReader isr; CodeViewer cv = new CodeViewer(); URL url; try { url = getClass().getResource(filename); is = url.openStream(); isr = new InputStreamReader(is); BufferedReader reader = new BufferedReader(isr); String line = reader.readLine(); while (line != null) { sourceCode += cv.syntaxHighlight(line) + " \n "; line = reader.readLine(); } sourceCode += new String("</pre></body></html>"); } catch (Exception ex) { sourceCode = "Could not load file: " + filename; } } }
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Code Sample 1:
public static boolean decodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.DECODE); out = new java.io.BufferedOutputStream(new java.io.FileOutputStream(outfile)); byte[] buffer = new byte[65536]; int read = -1; while ((read = in.read(buffer)) >= 0) { out.write(buffer, 0, read); } success = true; } catch (java.io.IOException exc) { exc.printStackTrace(); } finally { try { in.close(); } catch (Exception exc) { } try { out.close(); } catch (Exception exc) { } } return success; }
Code Sample 2:
private static void readAndRewrite(File inFile, File outFile) throws IOException { ImageInputStream iis = ImageIO.createImageInputStream(new BufferedInputStream(new FileInputStream(inFile))); DcmParser dcmParser = DcmParserFactory.getInstance().newDcmParser(iis); Dataset ds = DcmObjectFactory.getInstance().newDataset(); dcmParser.setDcmHandler(ds.getDcmHandler()); dcmParser.parseDcmFile(null, Tags.PixelData); PixelDataReader pdReader = pdFact.newReader(ds, iis, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR()); System.out.println("reading " + inFile + "..."); pdReader.readPixelData(false); ImageOutputStream out = ImageIO.createImageOutputStream(new BufferedOutputStream(new FileOutputStream(outFile))); DcmEncodeParam dcmEncParam = DcmEncodeParam.IVR_LE; ds.writeDataset(out, dcmEncParam); ds.writeHeader(out, dcmEncParam, Tags.PixelData, dcmParser.getReadVR(), dcmParser.getReadLength()); System.out.println("writing " + outFile + "..."); PixelDataWriter pdWriter = pdFact.newWriter(pdReader.getPixelDataArray(), false, ds, out, dcmParser.getDcmDecodeParam().byteOrder, dcmParser.getReadVR()); pdWriter.writePixelData(); out.flush(); out.close(); System.out.println("done!"); }
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Code Sample 1:
public DialogueSymbole(final JFrame jframe, final Element el, final String srcAttr) { super(jframe, JaxeResourceBundle.getRB().getString("symbole.Insertion"), true); this.jframe = jframe; this.el = el; final String nomf = el.getAttribute(srcAttr); boolean applet = false; try { final File dossierSymboles = new File("symboles"); if (!dossierSymboles.exists()) { JOptionPane.showMessageDialog(jframe, JaxeResourceBundle.getRB().getString("erreur.SymbolesNonTrouve"), JaxeResourceBundle.getRB().getString("erreur.Erreur"), JOptionPane.ERROR_MESSAGE); return; } liste = chercherImages(dossierSymboles); } catch (AccessControlException ex) { applet = true; try { final URL urlListe = DialogueSymbole.class.getClassLoader().getResource("symboles/liste.txt"); BufferedReader in = new BufferedReader(new InputStreamReader(urlListe.openStream())); final ArrayList<File> listeImages = new ArrayList<File>(); String ligne = null; while ((ligne = in.readLine()) != null) { if (!"".equals(ligne.trim())) listeImages.add(new File("symboles/" + ligne.trim())); } liste = listeImages.toArray(new File[listeImages.size()]); } catch (IOException ex2) { LOG.error(ex2); } } final JPanel cpane = new JPanel(new BorderLayout()); setContentPane(cpane); final GridLayout grille = new GridLayout((int) Math.ceil(liste.length / 13.0), 13, 10, 10); final JPanel spane = new JPanel(grille); cpane.add(spane, BorderLayout.CENTER); ichoix = 0; final MyMouseListener ecouteur = new MyMouseListener(); labels = new JLabel[liste.length]; for (int i = 0; i < liste.length; i++) { if (nomf != null && !"".equals(nomf) && nomf.equals(liste[i].getPath())) ichoix = i; URL urlIcone; try { if (applet) { final URL urlListe = DialogueSymbole.class.getClassLoader().getResource("symboles/liste.txt"); final String baseURL = urlListe.toString().substring(0, urlListe.toString().indexOf("symboles/liste.txt")); urlIcone = new URL(baseURL + liste[i].getPath()); } else urlIcone = liste[i].toURL(); } catch (MalformedURLException ex) { LOG.error(ex); break; } final Icon ic = new ImageIcon(urlIcone); final JLabel label = new JLabel(ic); label.addMouseListener(ecouteur); labels[i] = label; spane.add(label); } final JPanel bpane = new JPanel(new FlowLayout(FlowLayout.RIGHT)); final JButton boutonAnnuler = new JButton(JaxeResourceBundle.getRB().getString("bouton.Annuler")); boutonAnnuler.addActionListener(this); boutonAnnuler.setActionCommand("Annuler"); bpane.add(boutonAnnuler); final JButton boutonOK = new JButton(JaxeResourceBundle.getRB().getString("bouton.OK")); boutonOK.addActionListener(this); boutonOK.setActionCommand("OK"); bpane.add(boutonOK); cpane.add(bpane, BorderLayout.SOUTH); getRootPane().setDefaultButton(boutonOK); choix(ichoix); pack(); if (jframe != null) { final Rectangle r = jframe.getBounds(); setLocation(r.x + r.width / 4, r.y + r.height / 4); } else { final Dimension screen = Toolkit.getDefaultToolkit().getScreenSize(); setLocation((screen.width - getSize().width) / 3, (screen.height - getSize().height) / 3); } }
Code Sample 2:
private void copyResources(File oggDecDir, String[] resources, String resPrefix) throws FileNotFoundException, IOException { for (int i = 0; i < resources.length; i++) { String res = resPrefix + resources[i]; InputStream is = this.getClass().getResourceAsStream(res); if (is == null) throw new IllegalArgumentException("cannot find resource '" + res + "'"); File file = new File(oggDecDir, resources[i]); if (!file.exists() || file.length() == 0) { FileOutputStream fos = new FileOutputStream(file); try { IOUtils.copyStreams(is, fos); } finally { fos.close(); } } } }
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00
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Code Sample 1:
public void convert(File src, File dest) throws IOException { InputStream in = new BufferedInputStream(new FileInputStream(src)); DcmParser p = pfact.newDcmParser(in); Dataset ds = fact.newDataset(); p.setDcmHandler(ds.getDcmHandler()); try { FileFormat format = p.detectFileFormat(); if (format != FileFormat.ACRNEMA_STREAM) { System.out.println("\n" + src + ": not an ACRNEMA stream!"); return; } p.parseDcmFile(format, Tags.PixelData); if (ds.contains(Tags.StudyInstanceUID) || ds.contains(Tags.SeriesInstanceUID) || ds.contains(Tags.SOPInstanceUID) || ds.contains(Tags.SOPClassUID)) { System.out.println("\n" + src + ": contains UIDs!" + " => probable already DICOM - do not convert"); return; } boolean hasPixelData = p.getReadTag() == Tags.PixelData; boolean inflate = hasPixelData && ds.getInt(Tags.BitsAllocated, 0) == 12; int pxlen = p.getReadLength(); if (hasPixelData) { if (inflate) { ds.putUS(Tags.BitsAllocated, 16); pxlen = pxlen * 4 / 3; } if (pxlen != (ds.getInt(Tags.BitsAllocated, 0) >>> 3) * ds.getInt(Tags.Rows, 0) * ds.getInt(Tags.Columns, 0) * ds.getInt(Tags.NumberOfFrames, 1) * ds.getInt(Tags.NumberOfSamples, 1)) { System.out.println("\n" + src + ": mismatch pixel data length!" + " => do not convert"); return; } } ds.putUI(Tags.StudyInstanceUID, uid(studyUID)); ds.putUI(Tags.SeriesInstanceUID, uid(seriesUID)); ds.putUI(Tags.SOPInstanceUID, uid(instUID)); ds.putUI(Tags.SOPClassUID, classUID); if (!ds.contains(Tags.NumberOfSamples)) { ds.putUS(Tags.NumberOfSamples, 1); } if (!ds.contains(Tags.PhotometricInterpretation)) { ds.putCS(Tags.PhotometricInterpretation, "MONOCHROME2"); } if (fmi) { ds.setFileMetaInfo(fact.newFileMetaInfo(ds, UIDs.ImplicitVRLittleEndian)); } OutputStream out = new BufferedOutputStream(new FileOutputStream(dest)); try { } finally { ds.writeFile(out, encodeParam()); if (hasPixelData) { if (!skipGroupLen) { out.write(PXDATA_GROUPLEN); int grlen = pxlen + 8; out.write((byte) grlen); out.write((byte) (grlen >> 8)); out.write((byte) (grlen >> 16)); out.write((byte) (grlen >> 24)); } out.write(PXDATA_TAG); out.write((byte) pxlen); out.write((byte) (pxlen >> 8)); out.write((byte) (pxlen >> 16)); out.write((byte) (pxlen >> 24)); } if (inflate) { int b2, b3; for (; pxlen > 0; pxlen -= 3) { out.write(in.read()); b2 = in.read(); b3 = in.read(); out.write(b2 & 0x0f); out.write(b2 >> 4 | ((b3 & 0x0f) << 4)); out.write(b3 >> 4); } } else { for (; pxlen > 0; --pxlen) { out.write(in.read()); } } out.close(); } System.out.print('.'); } finally { in.close(); } }
Code Sample 2:
public void init() { String inputLine = ""; String registeredLine = ""; println("Insert RSS link:"); String urlString = sc.nextLine(); if (urlString.length() == 0) init(); println("Working..."); BufferedReader in = null; URL url = null; try { url = new URL(urlString); in = new BufferedReader(new InputStreamReader(url.openStream())); while ((inputLine = in.readLine()) != null) registeredLine += inputLine; in.close(); } catch (MalformedURLException e2) { e2.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } File elenco = new File("elenco.txt"); PrintWriter pout = null; try { pout = new PrintWriter(elenco); } catch (FileNotFoundException e1) { e1.printStackTrace(); } Vector<String> vector = new Vector<String>(); int endIndex = 0; int numeroFoto = 0; while ((registeredLine = registeredLine.substring(endIndex)).length() > 10) { int startIndex = registeredLine.indexOf("<media:content url='"); if (startIndex == -1) break; registeredLine = registeredLine.substring(startIndex); String address = ""; startIndex = registeredLine.indexOf("http://"); endIndex = registeredLine.indexOf("' height"); address = registeredLine.substring(startIndex, endIndex); println(address); pout.println(address); vector.add(address); numeroFoto++; } if (pout.checkError()) println("ERROR"); println("Images number: " + numeroFoto); if (numeroFoto == 0) { println("No photos found, WebAlbum is empty or the RSS link is incorrect."); sc.nextLine(); System.exit(0); } println("Start downloading? (y/n)"); if (!sc.nextLine().equalsIgnoreCase("y")) System.exit(0); SimpleDateFormat data = new SimpleDateFormat("dd-MM-yy_HH.mm"); Calendar oggi = Calendar.getInstance(); String cartella = data.format(oggi.getTime()); boolean success = new File(cartella).mkdir(); if (success) println("Sub-directory created..."); println("downloading...\npress ctrl-C to stop"); BufferedInputStream bin = null; BufferedOutputStream bout = null; URL photoAddr = null; int len = 0; for (int x = 0; x < vector.size(); x++) { println("file " + (x + 1) + " of " + numeroFoto); try { photoAddr = new URL(vector.get(x)); bin = new BufferedInputStream(photoAddr.openStream()); bout = new BufferedOutputStream(new FileOutputStream(cartella + "/" + (x + 1) + ".jpg")); while ((len = bin.read()) != -1) bout.write(len); bout.flush(); bout.close(); bin.close(); } catch (FileNotFoundException e) { e.printStackTrace(); } catch (IOException e) { e.printStackTrace(); } } println("Done!"); }
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