instance_id stringlengths 10 57 | file_changes listlengths 1 15 | repo stringlengths 7 53 | base_commit stringlengths 40 40 | problem_statement stringlengths 11 52.5k | patch stringlengths 251 7.06M |
|---|---|---|---|---|---|
ICB-DCM__pyABC-295 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pyabc/acceptor/acceptor.py:StochasticAcceptor.initialize",
"pyabc/acceptor/acceptor.py:StochasticAcceptor.__call__"
],
"edited_modules": [
"pyabc/acceptor/acceptor.py:Stochas... | ICB-DCM/pyABC | 45369a69df3fbb982529f5b2188e64783efe613a | Log distance weights
Until the near future, the distance weights will not be stored in the history due to legacy reasons. Thus, it may be good to add a callback function which is called after each update method.
Sidenote: Always possible by creating a SubClass, or, to some degree, using the `logging.getLogger("Dista... | diff --git a/pyabc/acceptor/acceptor.py b/pyabc/acceptor/acceptor.py
index cc8ca36..3c6acac 100644
--- a/pyabc/acceptor/acceptor.py
+++ b/pyabc/acceptor/acceptor.py
@@ -19,7 +19,7 @@ import pandas as pd
from typing import Callable
import logging
-from ..distance import Distance, SCALE_LIN
+from ..distance import Di... |
ICB-DCM__pyPESTO-393 | [
{
"changes": {
"added_entities": [
"pypesto/problem.py:Problem.lb",
"pypesto/problem.py:Problem.ub",
"pypesto/problem.py:Problem.x_guesses",
"pypesto/problem.py:Problem.dim",
"pypesto/problem.py:Problem.x_free_indices",
"pypesto/problem.py:Problem.normalize"... | ICB-DCM/pyPESTO | 2a5536323d36cdc8754ffe8475be99626718b23a | Profiles incompatible with fixed parameters (Old: Profiles are per default computed for all including fixed indices)
I think the proper default behavior would be to only compute profiles for free parameters. Opinions? | diff --git a/pypesto/problem.py b/pypesto/problem.py
index bfaafea..5b07302 100644
--- a/pypesto/problem.py
+++ b/pypesto/problem.py
@@ -55,10 +55,6 @@ class Problem:
x_priors_defs:
Definitions of priors for parameters. Types of priors, and their
required and optional parameters, are described in... |
ICB-DCM__pyPESTO-676 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pypesto/profile/validation_intervals.py:validation_profile_significance"
],
"edited_modules": [
"pypesto/profile/validation_intervals.py:validation_profile_significance"
]
... | ICB-DCM/pyPESTO | 5cce409f5c053ed257329f74c31f050bfcfe938c | Add more tests to validation intervals
**Feature description**
It would be nice to check, if the prediction for `x_opt` leads to the significance `1` and if the significance approaches zero for larger and larger deviations. (I had some problems with that for one application of mine, but I would not exclude that the i... | diff --git a/pypesto/profile/validation_intervals.py b/pypesto/profile/validation_intervals.py
index 15de409..c60a437 100644
--- a/pypesto/profile/validation_intervals.py
+++ b/pypesto/profile/validation_intervals.py
@@ -125,13 +125,13 @@ def validation_profile_significance(
# => survival function chi.sf
if r... |
IKNL__vantage6-85 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"vantage6/cli/configuration_wizard.py:node_configuration_questionaire",
"vantage6/cli/configuration_wizard.py:server_configuration_questionaire"
],
"edited_modules": [
"vantag... | IKNL/vantage6 | a5b1d13084046d2621a0394719792f17e1712ac9 | Extend CLI to support VPN configuration
The CLI does not allow to configure the VPN server. This needs to be added to the following commands:
- [x] `vserver new`
- [x] `vserver-local new`
- [x] `vnode new`
- [x] `vnode-local new` | diff --git a/vantage6/cli/configuration_wizard.py b/vantage6/cli/configuration_wizard.py
index cc30ac9..df35d74 100644
--- a/vantage6/cli/configuration_wizard.py
+++ b/vantage6/cli/configuration_wizard.py
@@ -75,6 +75,14 @@ def node_configuration_questionaire(dirs, instance_name):
choices=["DEBUG", ... |
INM-6__python-odmltables-120 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "doc/conf.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"odmltables/compare_secti... | INM-6/python-odmltables | f9787990e4865f222fb072e8c5c84f96a2bada6c | Error when converting empty (apart from header) csv file
'row_id' is undefined here when the csv file only contains a header:
https://github.com/INM-6/python-odmltables/blob/f9787990e4865f222fb072e8c5c84f96a2bada6c/odmltables/odml_table.py#L492 | diff --git a/.travis.yml b/.travis.yml
index 8b19d30..6981149 100644
--- a/.travis.yml
+++ b/.travis.yml
@@ -14,17 +14,17 @@ addons:
python:
- 3.6
-
+
env:
matrix:
# This environment tests for python 3 packages with conda
- DISTRIB="conda" PYTHON_VERSION="3.6"
NUMPY_VERSION="1.13.3" XLW... |
IdentityPython__JWTConnect-Python-CryptoJWT-170 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/cryptojwt/jwe/jwe_ec.py:JWE_EC.dec_setup"
],
"edited_modules": [
"src/cryptojwt/jwe/jwe_ec.py:JWE_EC"
]
},
"file": "src/cryptojwt/jwe/jwe_ec.py"
}
] | IdentityPython/JWTConnect-Python-CryptoJWT | e77cd914703765804a8739d90893280214b9b0f1 | Wrong type in JWE_EC.dec_setup
Hello cryptojwt team,
Thanks for your work, it usually works like a charm.
I found an issue in `cryptojwt.jwe.jwe_ec.JWE_EC.dec_setup`.
https://github.com/IdentityPython/JWTConnect-Python-CryptoJWT/blob/727bb9bff122a67e4e270330d990a7c1a1199664/src/cryptojwt/jwe/jwe_ec.py#L147
`apu... | diff --git a/src/cryptojwt/jwe/jwe_ec.py b/src/cryptojwt/jwe/jwe_ec.py
index 8c6c616..ff36ff2 100644
--- a/src/cryptojwt/jwe/jwe_ec.py
+++ b/src/cryptojwt/jwe/jwe_ec.py
@@ -138,7 +138,7 @@ class JWE_EC(JWEKey):
raise Exception("Ephemeral Public Key Missing in ECDH-ES Computation")
epubkey = ECKe... |
IdentityPython__SATOSA-432 | [
{
"changes": {
"added_entities": [
"src/satosa/micro_services/attribute_modifications.py:FilterAttributeValues._apply_filters",
"src/satosa/micro_services/attribute_modifications.py:FilterAttributeValues._shibmdscope_match_value",
"src/satosa/micro_services/attribute_modifications.... | IdentityPython/SATOSA | 4e8d27c0697f5fc302f4387a7a4ca170a6a1e393 | SAML2 SP backend check scope on attributes and reject by default
<!--- Provide a general summary of the issue in the Title above -->
The SAML2 SP backend should check the scope on scoped attributes asserted by an authenticating IdP and compare with the scope from the SAML metadata for the authenticating IdP and by def... | diff --git a/example/plugins/microservices/filter_attributes.yaml.example b/example/plugins/microservices/filter_attributes.yaml.example
index f368493..185f2de 100644
--- a/example/plugins/microservices/filter_attributes.yaml.example
+++ b/example/plugins/microservices/filter_attributes.yaml.example
@@ -2,6 +2,35 @@ mo... |
IdentityPython__oidc-op-130 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/oidcop/authz/__init__.py:AuthzHandling.__call__"
],
"edited_modules": [
"src/oidcop/authz/__init__.py:AuthzHandling"
]
},
"file": "src/oidcop/authz/__init__.py"
}... | IdentityPython/oidc-op | 9a2f6cfe6e7ecfb55e7934052101e79ec1c92d74 | Scopes handling
I will use this issue to try to describe how I think we should handle scopes. When we agree to something I will go forward and open a PR.
Right now we have `scope_supported` which is used to define the scopes that are advertised in the well-known endpoint as well as the scopes that we allow. This can... | diff --git a/docs/source/contents/conf.rst b/docs/source/contents/conf.rst
index 9799e8b..8ccf4c4 100644
--- a/docs/source/contents/conf.rst
+++ b/docs/source/contents/conf.rst
@@ -53,6 +53,33 @@ sub_funcs
Optional. Functions involved in *sub*ject value creation.
+
+scopes_mapping
+##############
+
+A dict definin... |
IdentityPython__pysaml2-697 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/saml2/metadata.py:metadata_tostring_fix"
],
"edited_modules": [
"src/saml2/metadata.py:metadata_tostring_fix"
]
},
"file": "src/saml2/metadata.py"
}
] | IdentityPython/pysaml2 | 8e0582ad87307f59370028ca93a4aa6f1bdc10a4 | make_metadata.py fails to generate signed metadata with Python 3
When using Python 3, `make_metadata.py` and the examples error out when trying to generate signed metadata.
The problem is that [`sign_entity_descriptor()`](https://github.com/IdentityPython/pysaml2/blob/master/src/saml2/metadata.py#L810) returns `str`... | diff --git a/src/saml2/metadata.py b/src/saml2/metadata.py
index 5c465032..b2317131 100644
--- a/src/saml2/metadata.py
+++ b/src/saml2/metadata.py
@@ -66,10 +66,10 @@ def metadata_tostring_fix(desc, nspair, xmlstring=""):
if not xmlstring:
xmlstring = desc.to_string(nspair)
- if six.PY2:
+ try:
... |
IdentityPython__pysaml2-746 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/saml2/entity.py:Entity.apply_binding"
],
"edited_modules": [
"src/saml2/entity.py:Entity"
]
},
"file": "src/saml2/entity.py"
},
{
"changes": {
"added_... | IdentityPython/pysaml2 | 344ca995f6f6be2a91ff4dae5a129a72945776fb | Saml2Client.apply_binding() should return HTTP status code
saml2.client.Saml2Client.apply_binding() should return a item 'status' in the returned dict. The status should be the HTTP status code which should be used in the response.
| diff --git a/src/saml2/entity.py b/src/saml2/entity.py
index c9572aef..672ad6f7 100644
--- a/src/saml2/entity.py
+++ b/src/saml2/entity.py
@@ -241,7 +241,7 @@ class Entity(HTTPBase):
if response:
info = self.use_http_artifact(msg_str, destination, relay_state)
info["method... |
IdentityPython__pysaml2-801 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/saml2/response.py:StatusResponse.issuer"
],
"edited_modules": [
"src/saml2/response.py:StatusResponse"
]
},
"file": "src/saml2/response.py"
}
] | IdentityPython/pysaml2 | 3bf6199fbde6c47eab79d88b4e3a21106f81c8d0 | Response issuer can be None
<!--- Provide a general summary of the issue in the Title above -->
The SAML spec [sstc-saml-core-errata-2.0-wd-07.pdf](https://github.com/IdentityPython/pysaml2/files/6429604/sstc-saml-core-errata-2.0-wd-07.pdf) states that Issuer is optional on a response object. Specifically:
- 3.3.3 El... | diff --git a/src/saml2/response.py b/src/saml2/response.py
index 9d4021ee..21abae9a 100644
--- a/src/saml2/response.py
+++ b/src/saml2/response.py
@@ -435,7 +435,12 @@ class StatusResponse(object):
self.response = mold.response
def issuer(self):
- return self.response.issuer.text.strip()
+ ... |
ImageMarkup__isic-challenge-scoring-64 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"isic_challenge_scoring/load_csv.py:parse_csv"
],
"edited_modules": [
"isic_challenge_scoring/load_csv.py:parse_csv"
]
},
"file": "isic_challenge_scoring/load_csv.py"
... | ImageMarkup/isic-challenge-scoring | 9b1fc71389cf5b23495f85f4976e2f6a3fba870d | ValueError: Index has duplicate keys: Index(['0.12345', 'ISIC_0012345'], dtype='object', name='image')
Sentry Issue: [STADE-1S](https://sentry.io/organizations/isic/issues/1149020425/?referrer=github_integration)
```
ValueError: Index has duplicate keys: Index(['0.12345', 'ISIC_0012345'], dtype='object', name='image')... | diff --git a/isic_challenge_scoring/load_csv.py b/isic_challenge_scoring/load_csv.py
index 8caef0a..d0156a1 100644
--- a/isic_challenge_scoring/load_csv.py
+++ b/isic_challenge_scoring/load_csv.py
@@ -29,7 +29,7 @@ def parse_truth_csv(csv_file_stream: TextIO) -> Tuple[pd.DataFrame, pd.DataFrame
def parse_csv(csv_fil... |
ImagingDataCommons__highdicom-211 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/highdicom/content.py:VOILUTTransformation.__init__"
],
"edited_modules": [
"src/highdicom/content.py:VOILUTTransformation"
]
},
"file": "src/highdicom/content.py"
... | ImagingDataCommons/highdicom | eea1f075a5bf5159e80b4cd16a9a19aa295b2719 | Failure to create GSPS when reference DICOM uses "MultiValue" for WindowCenter, WindowWidth
When I go to create a GSPS using hd.pr.GrayscaleSoftcopyPresentationState() I get an error for certain DICOM where WindowWidth and WindowCenter are not floats in the reference DICOM.
Here's the error I get:
```
~/anaconda3... | diff --git a/src/highdicom/content.py b/src/highdicom/content.py
index 844cdee..ddbed2a 100644
--- a/src/highdicom/content.py
+++ b/src/highdicom/content.py
@@ -1867,7 +1867,7 @@ class VOILUTTransformation(Dataset):
)
for exp in window_explanation:
_check_long_... |
ImagingDataCommons__highdicom-226 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/highdicom/sr/coding.py:CodedConcept.from_dataset"
],
"edited_modules": [
"src/highdicom/sr/coding.py:CodedConcept"
]
},
"file": "src/highdicom/sr/coding.py"
}
] | ImagingDataCommons/highdicom | 5cb05291d59378919de3c53f9c315f38c51121ce | Coded Concept with Long Code Value
The CodedConcept `__init()` assigns the value to a LongCodeValue tag if it is >16 characters, and the `value()` method also supports retrieving the value from either CodeValue, LongCodeValue, or URNCodeValue. But the `from_dataset()` classmethod raises an attribute error if the passe... | diff --git a/src/highdicom/sr/coding.py b/src/highdicom/sr/coding.py
index d4305b6..3301e86 100644
--- a/src/highdicom/sr/coding.py
+++ b/src/highdicom/sr/coding.py
@@ -126,7 +126,14 @@ class CodedConcept(Dataset):
raise TypeError(
'Dataset must be a pydicom.dataset.Dataset.'
... |
ImagingDataCommons__highdicom-307 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "src/highdicom/sr/__init__.py"
},
{
"changes": {
"added_entities": [
"src/highdicom/sr/content.py:CoordinatesForMeasurement.__init__",
... | ImagingDataCommons/highdicom | 32c5c70e3537c500b7e75d912486d7ee7af89b4b | Add SCOORD to a Measurement in SR (TID 320)
Hi, is it possible to add spatial coordinates to a Measurement in SR?
I'm looking at [TID 320 Image or Spatial Coordinates](https://dicom.nema.org/medical/dicom/current/output/chtml/part16/chapter_A.html#sect_TID_320), specifically row 3 and 4.
If it's not currently pos... | diff --git a/docs/installation.rst b/docs/installation.rst
index 37c9424..7eaecc0 100644
--- a/docs/installation.rst
+++ b/docs/installation.rst
@@ -16,7 +16,7 @@ Requirements
Installation
------------
-Pre-built package available at PyPi:
+Pre-build package available at PyPi:
.. code-block:: none
diff --git a... |
ImperialCollegeLondon__PyProBE-217 | [
{
"changes": {
"added_entities": [
"pyprobe/result.py:Result.export_to_mat"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"pyprobe/result.py:Result"
]
},
"file": "pyprobe/result.py"
}
] | ImperialCollegeLondon/PyProBE | d88e9353e88ceb1895c4d3ff60e50ed60902b488 | Add export to matlab function
Add a method to export a result object to matlab. It would write to a `.mat` file a `data` variable and an `info` variable. This would be primarily for using matlab as a plotting tool. | diff --git a/pyprobe/result.py b/pyprobe/result.py
index ca12368..a3f9d02 100644
--- a/pyprobe/result.py
+++ b/pyprobe/result.py
@@ -11,6 +11,8 @@ import polars as pl
from deprecated import deprecated
from numpy.typing import NDArray
from pydantic import BaseModel, Field, model_validator
+from scipy.io import savema... |
ImperialCollegeLondon__pycsvy-123 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"csvy/readers.py:read_header"
],
"edited_modules": [
"csvy/readers.py:read_header"
]
},
"file": "csvy/readers.py"
},
{
"changes": {
"added_entities": [
... | ImperialCollegeLondon/pycsvy | b694174c39a96dd24e22e6e6ed48b9ec996feddb | Implement validators registry
## Problem
The yaml header is meant to be flexible and there is no imposition of any specific fields that must be there. However, there are fields that, if present, must follow certain schema. An example of this are the CSV dialect (that will be implemented in #2) and the Tabular schema... | diff --git a/.vscode/settings.json b/.vscode/settings.json
index e137fad..e36fe4b 100644
--- a/.vscode/settings.json
+++ b/.vscode/settings.json
@@ -1,4 +1,21 @@
{
- "python.testing.unittestEnabled": false,
- "python.testing.pytestEnabled": true
-}
\ No newline at end of file
+ "[python]": {
+ "editor.defaul... |
ImperialCollegeLondon__pycsvy-124 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"csvy/readers.py:read_header",
"csvy/readers.py:read_metadata",
"csvy/readers.py:read_to_array",
"csvy/readers.py:read_to_dataframe",
"csvy/readers.py:read_to_polars",
... | ImperialCollegeLondon/pycsvy | 410594113065145700e9c45bec6f66d86f0cdb22 | `pycsvy` won't work with Unicode data on Windows
Currently, `pycsvy`'s various reader functions don't explicitly specify a desired text-encoding to the underlying calls to `open()`, which means that the platform's default will be used.
On Linux and macOS, the default encoding is UTF-8 but for unfortunate legacy reas... | diff --git a/README.md b/README.md
index 18efd21..7005830 100644
--- a/README.md
+++ b/README.md
@@ -8,8 +8,8 @@
[](https://codecov.io/gh/ImperialCollegeLondon/pycsvy)
[![Codacy Badge](https://app.codacy.com... |
ImperialCollegeLondon__pycsvy-54 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"csvy/readers.py:read_to_array",
"csvy/readers.py:read_to_dataframe"
],
"edited_modules": [
"csvy/readers.py:read_to_array",
"csvy/readers.py:read_to_dataframe"
... | ImperialCollegeLondon/pycsvy | eaf67e61c1ae6a18c2cf73de917fd3b3c47cd0b3 | Error occurs if `pandas` is not installed
I'm trying to use pycsvy with FINESSE, which doesn't use pandas, and I'm getting the following error:
```
Exception has occurred: TypeError
Tuple[t0, t1, ...]: each t must be a type. Got NotImplemented.
File "/home/alex/code/FINESSE/finesse/hardware/data_file_writer.py"... | diff --git a/csvy/readers.py b/csvy/readers.py
index 5b98c41..e51bcd9 100644
--- a/csvy/readers.py
+++ b/csvy/readers.py
@@ -7,7 +7,7 @@ import yaml
try:
from numpy.typing import NDArray
except ModuleNotFoundError:
- NDArray = NotImplemented # type: ignore
+ NDArray = None # type: ignore
logging.get... |
ImperialCollegeLondon__pycsvy-94 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "csvy/__init__.py"
},
{
"changes": {
"added_entities": [
"csvy/readers.py:read_to_polars"
],
"added_modules": [
"csvy... | ImperialCollegeLondon/pycsvy | 0ff7bf41f9666d31fcaf620d82376db83731155e | Add support for `polars`
## Problem
[`polars`](https://pola.rs/) has become recently a very attractive - and faster - alternative to `pandas`, so we should support it, as well.
## Solution
Largely copying what's in place for `pandas`, implement support for reading data into a `polars` dataframe with [`read_cs... | diff --git a/csvy/__init__.py b/csvy/__init__.py
index 9955d89..b053cda 100644
--- a/csvy/__init__.py
+++ b/csvy/__init__.py
@@ -6,5 +6,6 @@ from .readers import ( # noqa: F401
read_metadata,
read_to_array,
read_to_dataframe,
+ read_to_polars,
)
from .writers import Writer, write, write_header # n... |
Infinidat__munch-52 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"munch/__init__.py:fromYAML"
],
"edited_modules": [
"munch/__init__.py:fromYAML"
]
},
"file": "munch/__init__.py"
}
] | Infinidat/munch | dede29c5e8bde7ca575365d50dd44f8fc12a5991 | DefaultMunch.fromYAML should take default argument
Currently, `DefaultMunch.fromYAML` is the same as `Munch.fromYAML`. This is confusing, and it is a pitty because a real `DefaultMunch.fromYAML` would add functionality which, FWIW, I could use. Thus, I propose to create a dedicated `DefaultMunch.fromYAML` function wit... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 424148a..8823bcc 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -4,6 +4,8 @@ Changelog
Next Version
------------
+* Support ``fromYAML`` classmethod for all Munch subclasses (PR [#52](https://github.com/Infinidat/munch/pull/52) fixes [#34](https://github.com/Infinidat... |
Infinidat__munch-54 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"munch/__init__.py:Munch.get"
],
"edited_modules": [
"munch/__init__.py:Munch"
]
},
"file": "munch/__init__.py"
}
] | Infinidat/munch | dede29c5e8bde7ca575365d50dd44f8fc12a5991 | DefaultMunch getter now returns None instead of DefaultValue
If a DefaultMunch has a default value of None, munch.get(attr_name, default_value) will now return None instead of default_value
```
>>> from munch import DefaultMunch
>>> d = DefaultMunch(None, {'a': 1})
>>> d.get('a')
1
>>> d.get('b')
>>> d.get('b'... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 424148a..723ba37 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,7 @@ Changelog
Next Version
------------
+* Fix return value of DefaultMunch and DefaultFactoryMunch's get method (fixes [#53](https://github.com/Infinidat/munch/issues/53))
2.4.0 (2019-10-29)
... |
Infinidat__munch-93 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"munch/__init__.py:munchify"
],
"edited_modules": [
"munch/__init__.py:munchify"
]
},
"file": "munch/__init__.py"
}
] | Infinidat/munch | 28c1256e76c00f42aa9315015283f0bba8819c4c | munchify broken?
Here is a minimal working example, which is broken. Is this already fixed?
`munchify((1,2,[{'A': 'B'}]))
Result: (1, 2, [Munch({'A': 'B'}), Munch({'A': 'B'})])
Expected: (1, 2, [Munch({'A': 'B'})])` | diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index 3880744..64954bd 100644
--- a/.github/workflows/ci.yml
+++ b/.github/workflows/ci.yml
@@ -40,11 +40,15 @@ jobs:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- - uses: actions/setup-python@v4
- # Install the testing ... |
Informasjonsforvaltning__datacatalogtordf-64 | [
{
"changes": {
"added_entities": [
"src/datacatalogtordf/dataset.py:Dataset.spatial",
"src/datacatalogtordf/dataset.py:Dataset._spatial_to_graph"
],
"added_modules": null,
"edited_entities": [
"src/datacatalogtordf/dataset.py:Dataset.spatial_coverage",
"sr... | Informasjonsforvaltning/datacatalogtordf | 95d8a9af3843dab23cd5e8bff47c72c33cd7c54d | spatialCoverage property name should be spatial. Confform dct:spatial DCAT specification and property should be a list | diff --git a/src/datacatalogtordf/dataset.py b/src/datacatalogtordf/dataset.py
index cbeef12..419f9be 100644
--- a/src/datacatalogtordf/dataset.py
+++ b/src/datacatalogtordf/dataset.py
@@ -50,7 +50,7 @@ class Dataset(Resource):
distributions (List[Distribution]): A list of distributions of the dataset
... |
Informasjonsforvaltning__datacatalogtordf-69 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/datacatalogtordf/dataset.py:Dataset.temporal_resolution",
"src/datacatalogtordf/dataset.py:Dataset._temporal_resolution_to_graph"
],
"edited_modules": [
"src/datacatalogt... | Informasjonsforvaltning/datacatalogtordf | 20d2ddbf36c19a2bd6621dec3ecf64e50d021866 | temporal_resolution property should be a list | diff --git a/src/datacatalogtordf/dataset.py b/src/datacatalogtordf/dataset.py
index 419f9be..92eb7bb 100644
--- a/src/datacatalogtordf/dataset.py
+++ b/src/datacatalogtordf/dataset.py
@@ -54,7 +54,8 @@ class Dataset(Resource):
spatial_resolution (Decimal): Minimum spatial separation resolvable \
... |
Informasjonsforvaltning__datacatalogtordf-78 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/datacatalogtordf/catalog.py:Catalog.models",
"src/datacatalogtordf/catalog.py:Catalog.contains_services"
],
"edited_modules": [
"src/datacatalogtordf/catalog.py:Catalog"
... | Informasjonsforvaltning/datacatalogtordf | 3eb00ad2b92cfdf51138e301f87cdc5bea279834 | Validate content of lists
When user set a list-property, the library should validate the items of the list where this is feasible.
E.g. formats of Distribution where list should be a list of URIs: https://github.com/Informasjonsforvaltning/datacatalogtordf/blob/3eb00ad2b92cfdf51138e301f87cdc5bea279834/src/datacatalo... | diff --git a/pyproject.toml b/pyproject.toml
index a551582..80ee9b3 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -12,7 +12,7 @@ license = "Apache-2.0"
name = "datacatalogtordf"
readme = "README.md"
repository = "https://github.com/Informasjonsforvaltning/datacatalogtordf"
-version = "2.1.1"
+version = "2.1.2"... |
Informasjonsforvaltning__dsop-api-spesifikasjoner-28 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/dsop_api_spesifikasjoner/generateSpecification.py:_add_spec_to_catalog"
],
"edited_modules": [
"src/dsop_api_spesifikasjoner/generateSpecification.py:_add_spec_to_catalog"
... | Informasjonsforvaltning/dsop-api-spesifikasjoner | ac723cbd772c2517793aab67144f963de064b46a | Legge til endepunkt i produksjonsmiljø - Sparebank 1 Helgeland
Hei,
Kan dere tilgjengeliggjøre endepunktet for Sparebank 1 Helgeland - 937904029 i produksjonsmiljø?
Endepunkt:
https://api.sparebank1.no/dsopaccountcontrolinfo/v2/AccountControlInfoService/v2/937904029 | diff --git a/README.md b/README.md
index cb9e1a3..2e4a9ae 100644
--- a/README.md
+++ b/README.md
@@ -19,14 +19,17 @@ A simple script is made to do the generation based on the banker.csv file and th
- the name of the master specification file.
## Development
+
### Requirements
+
- python3
- [pyenv](https://gith... |
Informasjonsforvaltning__fdk-fulltext-search-138 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/fdk_fulltext_search/search/query_filter_utils.py:last_x_days_filter"
],
"edited_modules": [
"src/fdk_fulltext_search/search/query_filter_utils.py:last_x_days_filter"
]
... | Informasjonsforvaltning/fdk-fulltext-search | ae21fecef4a7571dc643abc03cdbce08b18b0492 | Last x days filter is not including current day
Filter range should add an extra day | diff --git a/src/fdk_fulltext_search/search/query_filter_utils.py b/src/fdk_fulltext_search/search/query_filter_utils.py
index b6b0f24..0a786d5 100644
--- a/src/fdk_fulltext_search/search/query_filter_utils.py
+++ b/src/fdk_fulltext_search/search/query_filter_utils.py
@@ -68,7 +68,7 @@ def exists_filter(request_item):
... |
Informasjonsforvaltning__fdk-fulltext-search-152 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/fdk_fulltext_search/search/query_filter_utils.py:collection_filter"
],
"edited_modules": [
"src/fdk_fulltext_search/search/query_filter_utils.py:collection_filter"
]
},... | Informasjonsforvaltning/fdk-fulltext-search | 1ff187de72e93778891da413bbb489fe5432d667 | Støtte and og or filter som input fra bruker
I dag er det hardkoda at vi bruker `and` når vi filterer på tema.
Vi bør støtte at bruker oppgir om det skal brukes `and` eller `or`. | diff --git a/src/fdk_fulltext_search/search/query_filter_utils.py b/src/fdk_fulltext_search/search/query_filter_utils.py
index d9c83a0..e8ab8cb 100644
--- a/src/fdk_fulltext_search/search/query_filter_utils.py
+++ b/src/fdk_fulltext_search/search/query_filter_utils.py
@@ -131,12 +131,16 @@ def collection_filter(filter_... |
Informasjonsforvaltning__fdk-fulltext-search-159 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "src/fdk_fulltext_search/search/fields.py"
}
] | Informasjonsforvaltning/fdk-fulltext-search | 79471fb88248f44cbed6cd601b74ad5e7bb72b84 | Verifiser at tema er med i søk
Tema skal, etter det eg forstår, vere med i søk. Ting tyder på at dette ikkje er tilfelle.
@oystein-asnes Kan du vere snill å kome opp med eit døme? | diff --git a/elasticsearch/create_datasets_index.json b/elasticsearch/create_datasets_index.json
index f596bfc..6be7656 100644
--- a/elasticsearch/create_datasets_index.json
+++ b/elasticsearch/create_datasets_index.json
@@ -935,15 +935,6 @@
}
}
},
- "expand... |
Informasjonsforvaltning__fdk-rdf-parser-294 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"src/fdk_rdf_parser/classes/concept.py:Definition",
"src/fdk_rdf_parser/classes/concept.py:Concept"
]
},
"file": "src/fdk_rdf_parser/classes/concept.py... | Informasjonsforvaltning/fdk-rdf-parser | 2ab291744ceed29487042a788a43a73f6c57536f | Legg til støtte for Definisjon(euvoc:XlNote) fra skos-ap-no v.2.0.3
se https://data.norge.no/specification/skos-ap-no-begrep#Definisjon
predikater fra gammel skos-ap-no og ekvivalent i ny:
- `rdfs:label` -> `rdf:value`
- `skos:scopeNote` -> flyttes opp til selve begrepet og fjernes fra Definisjon
- `dct:audience`... | diff --git a/src/fdk_rdf_parser/classes/concept.py b/src/fdk_rdf_parser/classes/concept.py
index c88371a..a4660b5 100644
--- a/src/fdk_rdf_parser/classes/concept.py
+++ b/src/fdk_rdf_parser/classes/concept.py
@@ -29,10 +29,10 @@ class TextAndURI:
@dataclass
class Definition:
text: Optional[Dict[str, str]] = None... |
Informasjonsforvaltning__fdk-rdf-parser-297 | [
{
"changes": {
"added_entities": [
"src/fdk_rdf_parser/parse_functions/concept.py:extract_labels"
],
"added_modules": [
"src/fdk_rdf_parser/parse_functions/concept.py:extract_labels"
],
"edited_entities": [
"src/fdk_rdf_parser/parse_functions/concept.py:pars... | Informasjonsforvaltning/fdk-rdf-parser | 969a0bdc1110685f4c2bea4ca4ceba4106488e33 | Legg til støtte for labels fra skos-ap-no v.2.0.3
prefLabel, altLabel og hiddenLabel får alle tre nye predikater og går over til å være direkte angivelse
- `skosxl:prefLabel` -> direkte angivelse på `skos:prefLabel`[ref](https://data.norge.no/specification/skos-ap-no-begrep#Begrep-anbefalt-term)
- `skosxl:altLabel`... | diff --git a/src/fdk_rdf_parser/parse_functions/concept.py b/src/fdk_rdf_parser/parse_functions/concept.py
index 75c9731..e891d18 100644
--- a/src/fdk_rdf_parser/parse_functions/concept.py
+++ b/src/fdk_rdf_parser/parse_functions/concept.py
@@ -35,6 +35,7 @@ from fdk_rdf_parser.rdf_utils import (
date_value,
... |
Informasjonsforvaltning__fdk-rdf-parser-306 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/fdk_rdf_parser/parse_functions/concept.py:parse_associative_relation",
"src/fdk_rdf_parser/parse_functions/concept.py:extract_associative_relations"
],
"edited_modules": [
... | Informasjonsforvaltning/fdk-rdf-parser | 6f2ba3bef2611d35b28a1e26831f58dfeb456325 | ny assosiativ relasjon fra skos-ap-no v2.0.3
ref https://data.norge.no/specification/skos-ap-no-begrep#Begrep-er-fra-begrep-i og https://data.norge.no/specification/skos-ap-no-begrep#Assosiativ-begrepsrelasjon
- predikat for angivelse av assosiativ relasjon endres fra `skosno:assosiativRelasjon` til `skosno:isFromCo... | diff --git a/src/fdk_rdf_parser/parse_functions/concept.py b/src/fdk_rdf_parser/parse_functions/concept.py
index c20652a..cb07846 100644
--- a/src/fdk_rdf_parser/parse_functions/concept.py
+++ b/src/fdk_rdf_parser/parse_functions/concept.py
@@ -260,7 +260,9 @@ def parse_associative_relation(
description=value_... |
Informasjonsforvaltning__fdk-rdf-parser-307 | [
{
"changes": {
"added_entities": [
"src/fdk_rdf_parser/parse_functions/concept.py:extract_collection_label"
],
"added_modules": [
"src/fdk_rdf_parser/parse_functions/concept.py:extract_collection_label"
],
"edited_entities": [
"src/fdk_rdf_parser/parse_funct... | Informasjonsforvaltning/fdk-rdf-parser | e2ff215db4d333aa5a7b2f6068aebc94261c9a16 | ny startDate & endDate fra skos-ap-no v.2.0.3
ref https://data.norge.no/specification/skos-ap-no-begrep#Begrep-dato-gyldig-fra-og-med og https://data.norge.no/specification/skos-ap-no-begrep#Begrep-dato-gyldig-til-og-med
gyldig fra og til vil ikke lenger bli angitt via en liste med PeriodOfTime, kun direkte angitt p... | diff --git a/src/fdk_rdf_parser/parse_functions/concept.py b/src/fdk_rdf_parser/parse_functions/concept.py
index cb07846..b8bb792 100644
--- a/src/fdk_rdf_parser/parse_functions/concept.py
+++ b/src/fdk_rdf_parser/parse_functions/concept.py
@@ -18,10 +18,7 @@ from rdflib.namespace import (
SKOS,
)
-from fdk_rdf... |
Informasjonsforvaltning__fdk-rdf-parser-308 | [
{
"changes": {
"added_entities": [
"src/fdk_rdf_parser/parse_functions/concept.py:parse_generic_relation_deprecated",
"src/fdk_rdf_parser/parse_functions/concept.py:extract_collection_label"
],
"added_modules": [
"src/fdk_rdf_parser/parse_functions/concept.py:parse_gene... | Informasjonsforvaltning/fdk-rdf-parser | e2ff215db4d333aa5a7b2f6068aebc94261c9a16 | ny generisk relasjon fra skos-ap-no v2.0.3
https://data.norge.no/specification/skos-ap-no-begrep#Begrep-har-generisk-begrepsrelasjon
https://data.norge.no/specification/skos-ap-no-begrep#Generisk-begrepsrelasjon
- predikat for angivelse av assosiativ relasjon endres fra `skosno:generiskRelasjon` til `skosno:hasGene... | diff --git a/src/fdk_rdf_parser/parse_functions/concept.py b/src/fdk_rdf_parser/parse_functions/concept.py
index cb07846..f7f0146 100644
--- a/src/fdk_rdf_parser/parse_functions/concept.py
+++ b/src/fdk_rdf_parser/parse_functions/concept.py
@@ -18,10 +18,7 @@ from rdflib.namespace import (
SKOS,
)
-from fdk_rdf... |
Informasjonsforvaltning__fdk-rdf-parser-309 | [
{
"changes": {
"added_entities": [
"src/fdk_rdf_parser/parse_functions/concept.py:parse_partitive_relation_deprecated",
"src/fdk_rdf_parser/parse_functions/concept.py:parse_generic_relation_deprecated",
"src/fdk_rdf_parser/parse_functions/concept.py:extract_collection_label"
... | Informasjonsforvaltning/fdk-rdf-parser | e2ff215db4d333aa5a7b2f6068aebc94261c9a16 | ny partitiv relasjon fra skos-ap-no v2.0.3
https://data.norge.no/specification/skos-ap-no-begrep#Begrep-har-partitiv-begrepsrelasjon
https://data.norge.no/specification/skos-ap-no-begrep#Partitiv-begrepsrelasjon
- predikat for angivelse av partitiv relasjon endres fra `skosno:partitivRelasjon` til `skosno:hasPartit... | diff --git a/src/fdk_rdf_parser/parse_functions/concept.py b/src/fdk_rdf_parser/parse_functions/concept.py
index cb07846..8bdcdc5 100644
--- a/src/fdk_rdf_parser/parse_functions/concept.py
+++ b/src/fdk_rdf_parser/parse_functions/concept.py
@@ -18,10 +18,7 @@ from rdflib.namespace import (
SKOS,
)
-from fdk_rdf... |
Informasjonsforvaltning__fdk-rdf-parser-319 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/fdk_rdf_parser/parse_functions/conforms_to.py:extract_conforms_to"
],
"edited_modules": [
"src/fdk_rdf_parser/parse_functions/conforms_to.py:extract_conforms_to"
]
},
... | Informasjonsforvaltning/fdk-rdf-parser | c934018036106796d1221f6e99ade6858d27c144 | Hent ut og prioriter seeAlso som uri verdi for conformsTo på datasett
I følge dcat-ap-no så er typen til conformsTo dcat:Standard, som ikke har dct:source, men rdfs:seeAlso
Se https://informasjonsforvaltning.github.io/dcat-ap-no/#Standard-harReferanse
og https://informasjonsforvaltning.github.io/dcat-ap-no/#Dataset... | diff --git a/poetry.lock b/poetry.lock
index 95fda68..532b15e 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,4 +1,4 @@
-# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand.
+# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand.
[[package]]
... |
Informasjonsforvaltning__fdk-rdf-parser-320 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/fdk_rdf_parser/classes/dataservice.py:DataService.add_values_from_dcat_resource"
],
"edited_modules": [
"src/fdk_rdf_parser/classes/dataservice.py:DataService"
]
},
... | Informasjonsforvaltning/fdk-rdf-parser | 0a72edaddfd8858b4fe4830a24875fc1cc1be7fb | Feltet dctType for datasett må støtte data fra beskrivende begrep
ref https://data.norge.no/specification/dcat-ap-no#Datasett-type
Dette feltet må støtte at verdien er en referanse til et beskrivende begrep, feks fra kodelisten dataset-type.
-----
https://github.com/Informasjonsforvaltning/fdk-issue-tracker/issu... | diff --git a/.github/workflows/constraints.txt b/.github/workflows/constraints.txt
index 2dcd9ec..8a2e1cf 100644
--- a/.github/workflows/constraints.txt
+++ b/.github/workflows/constraints.txt
@@ -1,4 +1,4 @@
-pip==24.0
+pip==24.2
pipx==1.4.3
nox==2024.4.15
nox-poetry==1.0.3
diff --git a/poetry.lock b/poetry.lock
in... |
Instagram__MonkeyType-23 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"monkeytype/stubs.py:render_annotation"
],
"edited_modules": [
"monkeytype/stubs.py:render_annotation"
]
},
"file": "monkeytype/stubs.py"
}
] | Instagram/MonkeyType | 666b2a1c5fc09f219a9ef5811af68946cd9c1830 | `NewType` generated into invalid type signatures
Given
```python
UserId = NewType('UserId', int)
def get_user(self, user_id: UserId) -> 'User':
```
MonkeyType generates
```python
def get_user(
self,
user_id: <function NewType.<locals>.new_type at 0x1090a52f0>
) -> 'User': ...
```
which the... | diff --git a/.gitignore b/.gitignore
index a31079d..2f4a0c7 100644
--- a/.gitignore
+++ b/.gitignore
@@ -8,3 +8,4 @@ htmlcov/
doc/_build
dist/
build/
+.idea/
\ No newline at end of file
diff --git a/CHANGES.rst b/CHANGES.rst
index 3350f81..c3d23d3 100644
--- a/CHANGES.rst
+++ b/CHANGES.rst
@@ -5,7 +5,7 @@ master
--... |
Instagram__MonkeyType-306 | [
{
"changes": {
"added_entities": [
"monkeytype/tracing.py:get_previous_frames",
"monkeytype/tracing.py:get_locals_from_previous_frames"
],
"added_modules": [
"monkeytype/tracing.py:get_previous_frames",
"monkeytype/tracing.py:get_locals_from_previous_frames"
... | Instagram/MonkeyType | 2ce8dbc408078c744fe9e2afcd2b5b57f3bc4fde | Calls to locally defined functions are not captured
Calls to locally defined functions are not captured, for example:
`mod.py`:
```python
def add(a, b):
def add_impl(a, b):
return a + b
return add_impl(a, b)
```
`main.py`:
```python
from mod import add
add(1, 2)
```
After running `monke... | diff --git a/monkeytype/tracing.py b/monkeytype/tracing.py
index 4109b6b..1360d08 100644
--- a/monkeytype/tracing.py
+++ b/monkeytype/tracing.py
@@ -130,6 +130,17 @@ def _has_code(
return None
+def get_previous_frames(frame: Optional[FrameType]) -> Iterator[FrameType]:
+ while frame is not None:
+ yi... |
Instagram__MonkeyType-318 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"monkeytype/stubs.py:render_signature"
],
"edited_modules": [
"monkeytype/stubs.py:render_signature"
]
},
"file": "monkeytype/stubs.py"
}
] | Instagram/MonkeyType | 12460f8091f42d66e390c6a3bd3b85ad1361884c | Stubs with positional-only args output too many slashes and cause a SyntaxError
`mod.py`:
```py
def add(a, b, /, c):
return 0
```
`main.py`:
```py
from mod import add
add(1, 2, c=3)
```
```sh
$ monkeytype run ./main.py
$ monkeytype stub mod
def add(a: int, /, b: int, /, /, c: int) -> int: ...
$ mo... | diff --git a/monkeytype/stubs.py b/monkeytype/stubs.py
index 2723fb5..6523797 100644
--- a/monkeytype/stubs.py
+++ b/monkeytype/stubs.py
@@ -452,10 +452,10 @@ def render_signature(
formatted_params.append(formatted)
- if render_pos_only_separator:
- # There were only positional-only param... |
J-CPelletier__webcomix-20 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"webcomix/comic.py:Comic.save_image_filename"
],
"edited_modules": [
"webcomix/comic.py:Comic"
]
},
"file": "webcomix/comic.py"
},
{
"changes": {
"added_en... | J-CPelletier/webcomix | 9476ff995ba90d3b810c4f38e5337b868ca09c97 | Enhancement Schlock Mercenary
Is it possible to add https://www.schlockmercenary.com/ to the list of supported comics? | diff --git a/webcomix/comic.py b/webcomix/comic.py
index 54bb578..e135208 100644
--- a/webcomix/comic.py
+++ b/webcomix/comic.py
@@ -1,5 +1,6 @@
import os
from typing import List, Mapping
+from urllib.parse import urlparse
from zipfile import ZipFile, BadZipFile
import click
@@ -153,10 +154,13 @@ class Comic:
... |
J-CPelletier__webcomix-7 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"webcomix/main.py:search",
"webcomix/main.py:custom"
],
"edited_modules": [
"webcomix/main.py:search",
"webcomix/main.py:custom"
]
},
"file": "webcomix/m... | J-CPelletier/webcomix | 25d394314ce26816302e9c878f5cebfb853c16fb | Custom: Add a -y (yes) option
Looking to use this as a replacement for Dosage, as this allows for custom comics. I'd like to run this daily (or every few days) on a number of comics to pull latest comic. The prompting on Custom Comics (are you sure) is a stumbling block to script it. Can you maybe add a -y to custom, f... | diff --git a/webcomix/main.py b/webcomix/main.py
index 0053bbb..cba546d 100644
--- a/webcomix/main.py
+++ b/webcomix/main.py
@@ -56,7 +56,12 @@ def download(name, cbz):
default=False,
is_flag=True,
help="Outputs the comic as a cbz file")
-def search(name, start_url, cbz):
+@click.option(
+ "-y",
+ ... |
J535D165__pyalex-13 | [
{
"changes": {
"added_entities": [
"pyalex/api.py:_params_merge",
"pyalex/api.py:BaseOpenAlex._add_params"
],
"added_modules": [
"pyalex/api.py:_params_merge"
],
"edited_entities": [
"pyalex/api.py:_flatten_kv",
"pyalex/api.py:BaseOpenAlex.__... | J535D165/pyalex | c16060b29717b364be52bf4c2f935926c6b3b4f9 | Add example for boolean operators to documentation
Thanks for providing pyalex! It would be helpful to have an example for the use of different boolean filters in the Readme.
Example URL: https://api.openalex.org/works?filter=institutions.country_code:tw,institutions.country_code:hk | diff --git a/pyalex/api.py b/pyalex/api.py
index 034bafe..c2e95b4 100644
--- a/pyalex/api.py
+++ b/pyalex/api.py
@@ -21,21 +21,55 @@ class AlexConfig(dict):
config = AlexConfig(email=None, api_key=None, openalex_url="https://api.openalex.org")
-def _flatten_kv(k, v):
+def _flatten_kv(d, prefix=""):
- if isins... |
J535D165__pyalex-64 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pyalex/api.py:Paginator.__init__",
"pyalex/api.py:BaseOpenAlex.paginate"
],
"edited_modules": [
"pyalex/api.py:Paginator",
"pyalex/api.py:BaseOpenAlex"
]
},... | J535D165/pyalex | 4ef72fb080b850013fc19042cf2f5d30d2b70e38 | Calling `__next__` before `__iter__` on `Paginator` gives error
The paginator class implements both `__iter__` and `__next__`, but if you call `__next__` before `__iter__` you get an error:
```[python]
import pyalex
pager = pyalex.Works().paginate()
next(pager)
```
gives:
```
Traceback (most recent call last)... | diff --git a/pyalex/api.py b/pyalex/api.py
index f50fb2c..0e59d13 100644
--- a/pyalex/api.py
+++ b/pyalex/api.py
@@ -14,6 +14,26 @@ except ImportError:
class AlexConfig(dict):
+ """Configuration class for OpenAlex API.
+
+ Attributes
+ ----------
+ email : str
+ Email address for API requests.
+... |
JDASoftwareGroup__rle-array-23 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"rle_array/array.py:RLEArray.mean"
],
"edited_modules": [
"rle_array/array.py:RLEArray"
]
},
"file": "rle_array/array.py"
}
] | JDASoftwareGroup/rle-array | d3b9a22ab96c7c5dc22e80e0773ca742c6809635 | Bug with `mean` using your `README` demo
Hi there. Thanks for this interesting extension, I'm thinking of using it in an upcoming conference talk. I've spent most of this year talking on High Performance Python (I'm co-author of the O'Reilly publication with this name) and for an upcoming talk I'd like to include RLE a... | diff --git a/rle_array/array.py b/rle_array/array.py
index 915e6c2..896fe99 100644
--- a/rle_array/array.py
+++ b/rle_array/array.py
@@ -457,7 +457,7 @@ class RLEArray(ExtensionArray):
if n == 0:
return self.dtype.na_value
else:
- return np.dot(data, lengths) / self.dtype._dtyp... |
Jc2k__aiohomekit-233 | [
{
"changes": {
"added_entities": [
"aiohomekit/zeroconf.py:ZeroconfController._async_update_from_cache",
"aiohomekit/zeroconf.py:ZeroconfController._async_get_ptr_records"
],
"added_modules": null,
"edited_entities": [
"aiohomekit/zeroconf.py:ZeroconfController.as... | Jc2k/aiohomekit | 0b846304e45bb9b8b6118abedddadac4e8d938ff | Invalid HomeKit Zeroconf record
Getting the following in home assistant logs...
022-11-02 17:33:30.752 DEBUG (MainThread) [aiohomekit.protocol.tlv] sending [
1 (Identifier): (2 bytes/<class 'bytes'>) b'\x01\x00'
2 (Salt): (1 bytes/<class 'bytes'>) b'\x01'
]
2022-11-02 17:33:33.767 DEBUG (MainThread) [aiohomekit.... | diff --git a/aiohomekit/zeroconf.py b/aiohomekit/zeroconf.py
index 51b6b48..030b99c 100644
--- a/aiohomekit/zeroconf.py
+++ b/aiohomekit/zeroconf.py
@@ -25,7 +25,7 @@ from ipaddress import ip_address
import logging
import async_timeout
-from zeroconf import ServiceListener, ServiceStateChange, Zeroconf
+from zeroco... |
Jc2k__aiohomekit-267 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"aiohomekit/characteristic_cache.py:CharacteristicCacheType.async_create_or_update_map",
"aiohomekit/characteristic_cache.py:CharacteristicCacheMemory.async_create_or_update_map",
"aiohom... | Jc2k/aiohomekit | 71a6136f0b4f8d67a4b8e3e72672937f66de930a | Accessories that do not send normal advertisements after subscribing to notify need the ability to restore the GSN between restarts
```
Oct 30 21:16:54 homeassistant homeassistant[468]: Traceback (most recent call last):
Oct 30 21:16:54 homeassistant homeassistant[468]: File "/usr/local/lib/python3.10/site-packages... | diff --git a/aiohomekit/characteristic_cache.py b/aiohomekit/characteristic_cache.py
index a6ecdb9..26417fc 100644
--- a/aiohomekit/characteristic_cache.py
+++ b/aiohomekit/characteristic_cache.py
@@ -40,6 +40,7 @@ class Pairing(TypedDict):
config_num: int
accessories: list[Any]
broadcast_key: str | None... |
JeffLIrion__python-androidtv-351 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"androidtv/basetv/basetv.py:BaseTV._cmd_running_apps"
],
"edited_modules": [
"androidtv/basetv/basetv.py:BaseTV"
]
},
"file": "androidtv/basetv/basetv.py"
},
{
"... | JeffLIrion/python-androidtv | d8a8f3a4810eec7180f0370750ea6d216dd8300f | Android Debug Bridge (AndroidTV) app_id frequently shows "Failed to write while dumping service window: Broken pipe
### The problem
I have an automation (below) that triggers based on the app_Id from the device via Android Debug Bridge. Since Home Assistant
/2023.10.4, the platform state attributes often responds ... | diff --git a/androidtv/basetv/basetv.py b/androidtv/basetv/basetv.py
index 1d702ec..47d82eb 100644
--- a/androidtv/basetv/basetv.py
+++ b/androidtv/basetv/basetv.py
@@ -323,10 +323,7 @@ class BaseTV(object): # pylint: disable=too-few-public-methods
if constants.CUSTOM_RUNNING_APPS in self._custom_commands:
... |
JelleZijlstra__ast_decompiler-34 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"ast_decompiler/decompiler.py:Decompiler.write_string"
],
"edited_modules": [
"ast_decompiler/decompiler.py:Decompiler"
]
},
"file": "ast_decompiler/decompiler.py"
}
] | JelleZijlstra/ast_decompiler | f347ea7ddf9162d5b0e89edec73b4af0fa5fc9f7 | Docstrings are not preserved correctly.
Currently it's impossible to correctly preserve docstrings. This test shows the issue:
```
from .tests import assert_decompiles
def test_docstrings():
assert_decompiles('''
def a():
"""
Docstring.
"""
return 1
''', '''def a():
"""
Docstring.
... | diff --git a/CHANGELOG b/CHANGELOG
index 62b8063..3d37564 100644
--- a/CHANGELOG
+++ b/CHANGELOG
@@ -1,4 +1,5 @@
unreleased
+- Preserve literal newlines in docstrings
- Fix decompilation of complex infinity
- Add support for Python 3.10 pattern matching
- Fix incorrect decompilation of lambdas in comprehension guar... |
JelleZijlstra__typeshed_client-47 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "setup.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
... | JelleZijlstra/typeshed_client | a963b6b65fb26e07087b6a0862387fd0999d7b98 | Switch to using ast for parsing
typed-ast is being phased out (python/typed_ast#170). As far as I can tell, stubs as used in typeshed should always be parsable with Python 3.6 and higher, because 3.7 introduced no new features relevant to stubs and 3.8 (which brought positional-only param syntax) was never ported to ty... | diff --git a/README.rst b/README.rst
index 8fb5ca8..5da841e 100644
--- a/README.rst
+++ b/README.rst
@@ -39,7 +39,7 @@ Functions provided:
``Path('/path/to/typeshed/stdlib/@python2/typing.pyi')``. If there is no stub for the
module, returns None.
- ``typeshed_client.get_stub_ast`` has the same interface, but ret... |
JohannesBuchner__imagehash-64 | [
{
"changes": {
"added_entities": [
"imagehash/__init__.py:old_hex_to_hash"
],
"added_modules": [
"imagehash/__init__.py:old_hex_to_hash"
],
"edited_entities": [
"imagehash/__init__.py:_binary_array_to_hex",
"imagehash/__init__.py:hex_to_hash",
... | JohannesBuchner/imagehash | 43481e54c33983a4b14202214e718ec16692ccd7 | _binary_array_to_hex gives wrong value
Correct me if I am wrong, but `_binary_array_to_hex` gives wrong values.
```python
Python 2.7.13 (default, Feb 16 2017, 19:11:00)
[GCC 5.3.0] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> from PIL import Image
>>> import imagehash
>... | diff --git a/.gitignore b/.gitignore
index 93135d8..378b372 100644
--- a/.gitignore
+++ b/.gitignore
@@ -6,4 +6,5 @@ build
dist
ImageHash.egg-info/
.eggs
-.DS_Store
\ No newline at end of file
+.DS_Store
+.python-version
diff --git a/imagehash/__init__.py b/imagehash/__init__.py
index 0dc69b8..5da7efd 100644
--- a/i... |
JohnPaton__airbase-37 | [
{
"changes": {
"added_entities": [
"airbase/airbase.py:AirbaseClient.pollutants"
],
"added_modules": null,
"edited_entities": [
"airbase/airbase.py:AirbaseClient.__init__",
"airbase/airbase.py:AirbaseClient.all_countries",
"airbase/airbase.py:AirbaseClient... | JohnPaton/airbase | 4f7881fc8f1145607ed35bd446326a5e0a3cc294 | Drop "pl"/"shortpl" terminology in favor of something more readable
This terminology is only really used internally by the portal for generating URLs, it doesn't need to be exposed to the user.
The CSVs themselves use `AirPollutant` for the name (now: `pl`), `AirPollutantCode` for the URL containing the id (now: `s... | diff --git a/README.md b/README.md
index 9e67180..998cf8a 100644
--- a/README.md
+++ b/README.md
@@ -34,23 +34,23 @@ $ pip install airbase
```pycon
>>> import airbase
>>> client = airbase.AirbaseClient()
->>> client.all_countries
-['GR', 'ES', 'IS', 'CY', 'NL', 'AT', 'LV', 'BE', 'CH', 'EE', 'FR', 'DE', ...
+>>> clie... |
JohnPaton__airbase-43 | [
{
"changes": {
"added_entities": [
"airbase/cli.py:main",
"airbase/cli.py:_download"
],
"added_modules": [
"airbase/cli.py:main",
"airbase/cli.py:_download"
],
"edited_entities": [
"airbase/cli.py:version_callback",
"airbase/cli.py:ro... | JohnPaton/airbase | 7b3f9caaaa589d0eadf811aa6e6ad817e4d42144 | cli request confuses "CO" with "Co"
when attempting to download `CO` data, no data is found
``` bash
$ airbase pollutant CO --year 2023
Generating CSV download links...
100%|███████████████████████████████████████████████████████| 40/40 [00:52<00:00, 1.32s/it]
Generated 0 CSV links ready for downloading
Downlo... | diff --git a/.github/workflows/cicd.yaml b/.github/workflows/cicd.yaml
index 38335b5..cc7b6f8 100644
--- a/.github/workflows/cicd.yaml
+++ b/.github/workflows/cicd.yaml
@@ -12,8 +12,8 @@ jobs:
matrix:
python: [3.7, 3.8, 3.9, '3.10', '3.11']
steps:
- - uses: actions/checkout@v2
- - uses: a... |
JonathonReinhart__scuba-107 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"scuba/config.py:_process_script_node"
],
"edited_modules": [
"scuba/config.py:_process_script_node"
]
},
"file": "scuba/config.py"
}
] | JonathonReinhart/scuba | b323aff30dc09cb16bb19eca41a0c2d15d9a22b6 | Allow `script` to be a single string value
Currently, this is invalid:
```yaml
aliases:
foo:
image: xyz
script: echo Hello
``` | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 7943d52..346ce8c 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,10 @@ All notable changes to this project will be documented in this file.
This project adheres to [Semantic Versioning](http://semver.org/).
## [Unreleased]
+### Changed
+- Allow `script` to be a... |
JonathonReinhart__scuba-111 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"scuba/__main__.py:parse_scuba_args",
"scuba/__main__.py:ScubaDive.__init__",
"scuba/__main__.py:run_scuba"
],
"edited_modules": [
"scuba/__main__.py:parse_scuba_args"... | JonathonReinhart/scuba | aa438c4664b54b7b6096f520db949d98a6aed212 | Setting environment variables inside the container from the command line is hard
Currently the only way I have found to accomplish this is with the -d argument like this:
`scuba -d "'-e=woot=1'" /bin/bash`
I would recommended either additional documentation or adding a special -e option to scuba specifically for envir... | diff --git a/.travis.yml b/.travis.yml
index cdf06d2..f7d115b 100644
--- a/.travis.yml
+++ b/.travis.yml
@@ -53,7 +53,7 @@ deploy:
# Test PyPI (on any push to master)
- provider: pypi
- server: https://test.pypi.org/legacy/
+ server: https://testpypi.python.org/pypi
user: jreinhart
password:
... |
JonathonReinhart__scuba-125 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"scuba/__main__.py:parse_scuba_args",
"scuba/__main__.py:ScubaDive.__init__",
"scuba/__main__.py:ScubaDive.__setup_native_run",
"scuba/__main__.py:run_scuba"
],
"edite... | JonathonReinhart/scuba | c753a62f218c72215d4cda3ee61211a098eb408c | Scuba Can't Override Problematic ENTRYPOINT Values
When using `docker run`, if an image has an ENTRYPOINT value that the user does not wish to use, [they can pass](https://medium.com/@oprearocks/how-to-properly-override-the-entrypoint-using-docker-run-2e081e5feb9d) the `--entrypoint=""` flag. This is possible with scub... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 009cfa1..90668f3 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,9 @@ All notable changes to this project will be documented in this file.
This project adheres to [Semantic Versioning](http://semver.org/).
## [Unreleased]
+### Added
+- Enable scuba to override ... |
JonathonReinhart__scuba-137 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"scuba/config.py:Loader.from_yaml"
],
"edited_modules": [
"scuba/config.py:Loader"
]
},
"file": "scuba/config.py"
}
] | JonathonReinhart/scuba | 0244c81ec482d3c60202028bc075621447bc3ad1 | `!from_yml` can't handle keys containing '.' characters
Due to how the "key" is parsed at [config.py](https://github.com/JonathonReinhart/scuba/blob/0244c81ec482d3c60202028bc075621447bc3ad1/scuba/config.py#L65) '.' characters must be escaped or somehow encapsulated. | diff --git a/doc/yaml-reference.md b/doc/yaml-reference.md
index 6d066d3..920d210 100644
--- a/doc/yaml-reference.md
+++ b/doc/yaml-reference.md
@@ -250,6 +250,28 @@ aliases
- !from_yaml .gitlab-ci.yml part2.script
```
+This example shows how to reference job names containing a `.` character.
+
+**`.gitlab-ci... |
JonathonReinhart__scuba-149 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "scuba/compat.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"scuba/config.py:Load... | JonathonReinhart/scuba | 85b2cf1165100eded3f1899929598f5500449133 | Cache YAML Files that are Referenced in !from_yaml Statements
## Problem
I am currently working on a large project that utilizes Scuba heavily. There are 27 scuba aliases in the `.scuba.yml` file, and all of the aliases have at least one `!from_yaml` directive in their definition. For example, many of the simple alias... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 11c03c0..9bced9b 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,8 @@ All notable changes to this project will be documented in this file.
This project adheres to [Semantic Versioning](http://semver.org/).
## [Unreleased]
+### Added
+- Cache yaml files loaded b... |
JonathonReinhart__scuba-158 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"scuba/__main__.py:ScubaDive.__setup_native_run",
"scuba/__main__.py:main"
],
"edited_modules": [
"scuba/__main__.py:ScubaDive",
"scuba/__main__.py:main"
]
}... | JonathonReinhart/scuba | fbfafaad8a80e5fc9d312ee53eb8846d998db68e | Allow missing top-level 'image' from .scuba.yml
For some projects it may not make sense to have a top-level (default) `image`. For these projects, the `aliases` are the primary use of Scuba.
Allow `.scuba.yml` to omit a top-level `image` key, and in this case require than an alias is being run. | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 3bafdde..f333da7 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -6,6 +6,7 @@ This project adheres to [Semantic Versioning](http://semver.org/).
### Changed
- Use username/groupname of invoking user inside container (#153)
- Ignore already existing UID/GIDs (#139)
+- Al... |
JonathonReinhart__scuba-177 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"scuba/__main__.py:ScubaDive.__init__",
"scuba/__main__.py:ScubaDive.get_docker_cmdline"
],
"edited_modules": [
"scuba/__main__.py:ScubaDive"
]
},
"file": "scuba... | JonathonReinhart/scuba | 5b811737c81bdd6c5035009b74c277979e84ce78 | Allow Docker Arguments in Scubafile
Currently Scuba has the `-d` or `--docker-args` flag that allows the user to specify arguments that should be passed-through to docker. This is an essential feature for using Scuba in contexts where the container needs to forward ports from the host to the container (for instance, du... | diff --git a/doc/yaml-reference.md b/doc/yaml-reference.md
index 8570305..082d5ef 100644
--- a/doc/yaml-reference.md
+++ b/doc/yaml-reference.md
@@ -40,6 +40,25 @@ environment:
- SECRET
```
+### `docker_args`
+
+The optional `docker_args` node allows additional docker arguments to be
+specified.
+
+Example:
+```y... |
JonathonReinhart__scuba-186 | [
{
"changes": {
"added_entities": [
"scuba/config.py:_get_typed_val",
"scuba/config.py:_get_dict",
"scuba/config.py:_get_delimited_str_list",
"scuba/config.py:_get_volumes",
"scuba/config.py:ScubaVolume.__init__",
"scuba/config.py:ScubaVolume.from_dict",
... | JonathonReinhart/scuba | 23df0565a768bb58f45e17858519cd8f8043376d | Mount additional volumes
Would it make sense to allow mounting additional directories through `.scuba.yml`, or is it already possible to do so?
My use case is that I would like to run tools to fetch dependencies (like `yarn`, `maven`, `composer`, ...). In order to access private repositories through SSH, one easy so... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 2f8e106..1cc0f40 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -2,6 +2,11 @@
All notable changes to this project will be documented in this file.
This project adheres to [Semantic Versioning](http://semver.org/).
+## [Unreleased]
+### Added
+- Add ability to specify ... |
JonathonReinhart__scuba-227 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"scuba/config.py:find_config",
"scuba/config.py:_get_volumes",
"scuba/config.py:_expand_path",
"scuba/config.py:ScubaVolume.from_dict",
"scuba/config.py:ScubaAlias.from_di... | JonathonReinhart/scuba | c2709a9c2439f6e931b922fccf2f8a9673cd07db | Detect or handle relative host paths in volumes
Currently a naked word will be interpreted as a named volume.
A relative path will cause docker to complain about the slash.
How should Scuba handle this?
1. Handle this by absolute-ifying the path.
- Should be interpreted as relative to .scuba.yml
- Is this nece... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 0448a46..5205a4f 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -2,6 +2,11 @@
All notable changes to this project will be documented in this file.
This project adheres to [Semantic Versioning](http://semver.org/).
+## [Unreleased]
+### Added
+- Enable the use of relat... |
JonathonReinhart__scuba-250 | [
{
"changes": {
"added_entities": [
"scuba/config.py:_expand_env_vars",
"scuba/config.py:_absoluteify_path",
"scuba/config.py:ScubaVolume.__post_init__"
],
"added_modules": [
"scuba/config.py:_expand_env_vars",
"scuba/config.py:_absoluteify_path"
],... | JonathonReinhart/scuba | b4bfd81ff1b939079d24aa8d4cd62fccc2e6ad9a | Restore ability to use named volumes
Prior to #227, you could, as a not-officially-support feature map a named volume at a container path:
```yaml
volumes:
/foo: foo-volume
```
```console
$ scuba --root --image debian:8.2 /bin/bash -c "echo yes > /foo/does-it-persist"
$ scuba --root --image debian:8.2 /bin/b... | diff --git a/docs/configuration.rst b/docs/configuration.rst
index 841626a..4569a86 100644
--- a/docs/configuration.rst
+++ b/docs/configuration.rst
@@ -147,25 +147,40 @@ style <https://yaml.org/spec/1.2/spec.html#id2788097>`_:
The optional ``volumes`` node *(added in v2.9.0)* allows additional
`bind-mounts <https:... |
JonathonReinhart__scuba-42 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"scuba/__main__.py:main"
],
"edited_modules": [
"scuba/__main__.py:main"
]
},
"file": "scuba/__main__.py"
},
{
"changes": {
"added_entities": null,
"... | JonathonReinhart/scuba | 9aa705d7d0419f1930ae034e2210d69f66f5bf2a | utils.format_cmdline misses last line
It appears that utils.format_cmdline fails to yield the last accumulated line.
This also means that a better test could be written, which splits the result back out, and compares it to the list of input arguments. | diff --git a/scuba/__main__.py b/scuba/__main__.py
index 57f8671..4a54fae 100755
--- a/scuba/__main__.py
+++ b/scuba/__main__.py
@@ -217,7 +217,7 @@ def main(argv=None):
if g_verbose or scuba_args.dry_run:
appmsg('Docker command line:')
- print(format_cmdline(run_args))
+ print('$ ' + form... |
JoshData__python-email-validator-49 | [
{
"changes": {
"added_entities": [
"email_validator/__init__.py:ValidatedEmail.as_dict"
],
"added_modules": null,
"edited_entities": [
"email_validator/__init__.py:main"
],
"edited_modules": [
"email_validator/__init__.py:ValidatedEmail",
"emai... | JoshData/python-email-validator | 458c9c49422eeac92903e4e7d2865b1256b361d6 | TypeError: Object of type ValidatedEmail is not JSON serializable
As can be seen in `main()`:
https://github.com/JoshData/python-email-validator/blob/cc9b0019fc9d4cedb491fd760e092572858d4604/email_validator/__init__.py#L526-L527
It looks like running `email_validator` as a standalone module can only produce runti... | diff --git a/email_validator/__init__.py b/email_validator/__init__.py
index 3b7014f..40140ca 100644
--- a/email_validator/__init__.py
+++ b/email_validator/__init__.py
@@ -156,6 +156,10 @@ class ValidatedEmail(object):
) \
+ ")"
+ """Convenience method for accessing ValidatedE... |
JuDFTteam__masci-tools-29 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "masci_tools/io/parsers/fleur/default_parse_tasks.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entiti... | JuDFTteam/masci-tools | 98f65c8ed7f71256334d88abffeacdbd7fc16d64 | Changes to the output of the outxml_parser
Up till now the output of the outxml_parser tries to mirror the current status of the hardcoded parser in aiida-fleur as closely as possible. Here we collect things that should be added/modified in the output. Feel free to add to this list
- The normal distance output is na... | diff --git a/masci_tools/io/parsers/fleur/default_parse_tasks.py b/masci_tools/io/parsers/fleur/default_parse_tasks.py
index fc3f4883..44840b81 100644
--- a/masci_tools/io/parsers/fleur/default_parse_tasks.py
+++ b/masci_tools/io/parsers/fleur/default_parse_tasks.py
@@ -119,6 +119,13 @@ TASKS_DEFINITION = {
... |
JuDFTteam__masci-tools-48 | [
{
"changes": {
"added_entities": [
"masci_tools/io/parsers/fleur/fleur_schema/inpschema_todict.py:convert_string_to_float_expr",
"masci_tools/io/parsers/fleur/fleur_schema/inpschema_todict.py:patch_basic_types",
"masci_tools/io/parsers/fleur/fleur_schema/inpschema_todict.py:patch_s... | JuDFTteam/masci-tools | 4e2fecf02bb695d5ae475199e930a27a346275ae | Add custom patching functions for schema dictionaries
The schema dictionaries for the fleur input and output schemas can only work of the information provided in the schema files. This means that some ambiguity that is discovered after the fact (meaning the schema is frozen for the Fleur release) is difficult to correc... | diff --git a/masci_tools/io/parsers/fleur/fleur_schema/inpschema_todict.py b/masci_tools/io/parsers/fleur/fleur_schema/inpschema_todict.py
index a3999b6d..5ab96504 100644
--- a/masci_tools/io/parsers/fleur/fleur_schema/inpschema_todict.py
+++ b/masci_tools/io/parsers/fleur/fleur_schema/inpschema_todict.py
@@ -16,17 +16... |
JuliaPy__pyjulia-481 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"src/julia/options.py:JuliaOptions"
]
},
"file": "src/julia/options.py"
}
] | JuliaPy/pyjulia | b95e5240e7c6b9420d2e9d6760065f58dcac1056 | Failure when setting optimize option
This is because pyjulia uses ArgumentsParser to parse --home & --sysimage, but it get the optimize value as an int instead of a string.
I'll submit a PR | diff --git a/src/julia/options.py b/src/julia/options.py
index 5b2728b..52d9364 100644
--- a/src/julia/options.py
+++ b/src/julia/options.py
@@ -134,7 +134,7 @@ class JuliaOptions(object):
compile = Choices("compile", yes_no_etc("all", "min"))
depwarn = Choices("depwarn", yes_no_etc("error"))
warn_overwr... |
Juniper__py-junos-eznc-1052 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"lib/jnpr/junos/facts/current_re.py:get_facts"
],
"edited_modules": [
"lib/jnpr/junos/facts/current_re.py:get_facts"
]
},
"file": "lib/jnpr/junos/facts/current_re.py"
... | Juniper/py-junos-eznc | 03a664fe4b11a509cc7f8cf936f1c9c5eb76ed3f | wrong device version when fetching pyez facts for nfx250ha-c
Hi,
The pyez version info received for this particular device:nfx250ha-c for is coming wrong.
{'2RE': False, 'HOME': '/var/home/regress', 'RE0': {'status': 'OK', 'up_time': '10 hours, 35 minutes, 48 seconds', 'mastership_state': 'master', 'model': 'RE-NFX... | diff --git a/lib/jnpr/junos/facts/current_re.py b/lib/jnpr/junos/facts/current_re.py
index c32ec3d1..e59b7a59 100644
--- a/lib/jnpr/junos/facts/current_re.py
+++ b/lib/jnpr/junos/facts/current_re.py
@@ -64,7 +64,7 @@ def get_facts(device):
octets = ip.split(".", 3)
... |
Juniper__py-junos-eznc-1121 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"lib/jnpr/junos/transport/tty.py:Terminal._login_state_machine"
],
"edited_modules": [
"lib/jnpr/junos/transport/tty.py:Terminal"
]
},
"file": "lib/jnpr/junos/transport/... | Juniper/py-junos-eznc | 5123c54d6f39a89678b29a70409e57adbe69612e | Pyez telnet not working as expected in certain JUNOS enhanced devices
Pyez telnet not working as expected in certain JUNOS enhanced devices. We are seeing login prompt 2 times.
#################### 0 ####################
INFO:jnpr.junos.tty:TTY: connecting to TTY:x.x.x.x ...
DEBUG:jnpr.junos.tty_telnet:Write:
I... | diff --git a/lib/jnpr/junos/transport/tty.py b/lib/jnpr/junos/transport/tty.py
index 204206a4..2b418051 100644
--- a/lib/jnpr/junos/transport/tty.py
+++ b/lib/jnpr/junos/transport/tty.py
@@ -217,14 +217,19 @@ class Terminal(object):
# assume we're in a hung state, i.e. we don't see
# a... |
Juniper__py-junos-eznc-351 | [
{
"changes": {
"added_entities": [
"lib/jnpr/junos/exception.py:ConnectError.msg"
],
"added_modules": null,
"edited_entities": [
"lib/jnpr/junos/exception.py:ConnectError.__init__",
"lib/jnpr/junos/exception.py:ConnectError.__repr__"
],
"edited_modules... | Juniper/py-junos-eznc | c561ed6f7e16b63a2d71c410c1ce2acc4fa75ed8 | Invalid host key error not caught
If the `~.ssh/known_hosts` file contains an invalid entry (in my case, caused by a missing newline) then PyEZ will only return the nondescript `ConnectError` message.
The failure comes from the **ncclient** `manager.connect()` function which, in turn, calls **paramiko**'s `load_know... | diff --git a/lib/jnpr/junos/exception.py b/lib/jnpr/junos/exception.py
index 6e3a89fa..390dc34e 100644
--- a/lib/jnpr/junos/exception.py
+++ b/lib/jnpr/junos/exception.py
@@ -1,4 +1,3 @@
-from lxml import etree
from jnpr.junos import jxml
@@ -129,6 +128,9 @@ class ConnectError(Exception):
"""
Parent clas... |
Juniper__py-junos-eznc-386 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"lib/jnpr/junos/facts/domain.py:facts_domain"
],
"edited_modules": [
"lib/jnpr/junos/facts/domain.py:facts_domain"
]
},
"file": "lib/jnpr/junos/facts/domain.py"
}
] | Juniper/py-junos-eznc | d850258f53611146f48db76842108beb9c4060b3 | Domain fact gathering not in try block, RPCerror uncaught.
Was using 1.1.0 until this morning with ssh key authentication. After upgrade, connecting to the devices fails:
from jnpr.junos import Device
router = 'somerouter'
username = 'netconf'
path2keyfile = 'path2privatekey'
... | diff --git a/lib/jnpr/junos/facts/domain.py b/lib/jnpr/junos/facts/domain.py
index ed104f01..92eb03ad 100644
--- a/lib/jnpr/junos/facts/domain.py
+++ b/lib/jnpr/junos/facts/domain.py
@@ -1,4 +1,5 @@
from jnpr.junos.utils.fs import FS
+from jnpr.junos.exception import RpcError
from lxml.builder import E
@@ -11,14 ... |
Juniper__py-junos-eznc-509 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"lib/jnpr/junos/device.py:Device.open"
],
"edited_modules": [
"lib/jnpr/junos/device.py:Device"
]
},
"file": "lib/jnpr/junos/device.py"
},
{
"changes": {
"... | Juniper/py-junos-eznc | ae516980deb810d9935cb62222fa7a4c522e1175 | Shell session does not work for root user.
I'm using the below example program.
```
#!/usr/bin/env python
import jnpr.junos.utils
from jnpr.junos import Device
from jnpr.junos.utils import *
from jnpr.junos.utils.start_shell import *
from jnpr.junos.utils.start_shell import StartShell
DUT = Device(... | diff --git a/lib/jnpr/junos/device.py b/lib/jnpr/junos/device.py
index 3dcb71df..3438b910 100644
--- a/lib/jnpr/junos/device.py
+++ b/lib/jnpr/junos/device.py
@@ -496,7 +496,7 @@ class Device(object):
self.connected = True
self._nc_transform = self.transform
- self._norm_transform = lambda: J... |
Juniper__py-junos-eznc-513 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"lib/jnpr/junos/device.py:Device.open"
],
"edited_modules": [
"lib/jnpr/junos/device.py:Device"
]
},
"file": "lib/jnpr/junos/device.py"
},
{
"changes": {
"... | Juniper/py-junos-eznc | 4b7d685336e0a18d6a8a5ef96eb0cb7b87221b37 | Link to techwiki page is broken on README
Hi
I noticed that the link to the techwiki in the `Support` section of the README is wrong
The link is pointing to the techwiki homepage and not the Junos PyEZ project page as suggested
https://github.com/Juniper/py-junos-eznc/blob/master/README.md#support
```
For d... | diff --git a/README.md b/README.md
index 61ab9f5c..0296eb7a 100644
--- a/README.md
+++ b/README.md
@@ -29,7 +29,7 @@ There is a growing interest and need to automate the network infrastructure into
For questions and general support, please visit our [Google Group](https://groups.google.com/forum/#!forum/junos-python... |
Juniper__py-junos-eznc-514 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "lib/jnpr/junos/utils/start_shell.py"
}
] | Juniper/py-junos-eznc | 4b7d685336e0a18d6a8a5ef96eb0cb7b87221b37 | Shell session does not work for root user.
I'm using the below example program.
```
#!/usr/bin/env python
import jnpr.junos.utils
from jnpr.junos import Device
from jnpr.junos.utils import *
from jnpr.junos.utils.start_shell import *
from jnpr.junos.utils.start_shell import StartShell
DUT = Device(... | diff --git a/lib/jnpr/junos/utils/start_shell.py b/lib/jnpr/junos/utils/start_shell.py
index b52c518a..1631ef63 100644
--- a/lib/jnpr/junos/utils/start_shell.py
+++ b/lib/jnpr/junos/utils/start_shell.py
@@ -3,7 +3,7 @@ from select import select
import re
_JUNOS_PROMPT = '> '
-_SHELL_PROMPT = '(%|#) '
+_SHELL_PROMPT... |
Juniper__py-junos-eznc-586 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"lib/jnpr/junos/utils/scp.py:SCP.open"
],
"edited_modules": [
"lib/jnpr/junos/utils/scp.py:SCP"
]
},
"file": "lib/jnpr/junos/utils/scp.py"
}
] | Juniper/py-junos-eznc | d4629f636b915a02c722f895d11b9f187970a60b | Support for private key files in scp.py
As noted [here](https://github.com/Juniper/py-junos-eznc/blob/master/lib/jnpr/junos/utils/scp.py#L77), private key files aren't supported. I need this for a project I am working on.
Is it possible to get this fixed?
Cheers, | diff --git a/lib/jnpr/junos/utils/scp.py b/lib/jnpr/junos/utils/scp.py
index adc49fd3..8a150d6c 100644
--- a/lib/jnpr/junos/utils/scp.py
+++ b/lib/jnpr/junos/utils/scp.py
@@ -73,11 +73,8 @@ class SCP(object):
.. note:: This method uses the same username/password authentication
credentials... |
Justintime50__github-archive-33 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"github_archive/archive.py:GithubArchive.__init__",
"github_archive/archive.py:GithubArchive.run",
"github_archive/archive.py:GithubArchive.get_personal_repos",
"github_archive/ar... | Justintime50/github-archive | 63e8730ff7eb0aeae2d94cbed9b239e38068c520 | Add a "Forks" flag to clone/pull forks
# Summary
By default, forks are included in cloning/pulling. This setting cannot be altered. Let's add a flag that allows the user to choose whether to include forks or not.
## Acceptance Criteria
- [ ] Add a flag that allows users to include forks in what is cloned/pulle... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index bff191d..cf5782d 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -15,6 +15,7 @@
* Added the `--threads` flag which can specify the number of concurrent threads to run at once (closes #22)
* Adds a new `--view` flag which allows you to "dry run" the application, seeing th... |
Justintime50__github-archive-44 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"github_archive/archive.py:GithubArchive.__init__",
"github_archive/archive.py:GithubArchive.initialize_project",
"github_archive/archive.py:GithubArchive.iterate_repos_to_archive"
... | Justintime50/github-archive | b04355be48d3abcee2d9ddaf9b26cb1e9edc7e4d | Add `--exclude` and `--include` flags for repo filtering
Hi,
It would be nice to be able to change the download path with an argument, and also have an argument for a limit of repository. | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 80dcc7c..b922fe4 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,5 +1,9 @@
# CHANGELOG
+## NEXT RELEASE
+
+* Adds an `--include` and `--exclude` CLI flag that accepts a comma-separated list of repo names to either include or exclude. If neither are passed, no filteri... |
Justintime50__github-archive-45 | [
{
"changes": {
"added_entities": [
"github_archive/archive.py:GithubArchive.remove_failed_dirs"
],
"added_modules": null,
"edited_entities": [
"github_archive/archive.py:GithubArchive.run",
"github_archive/archive.py:GithubArchive.get_all_git_assets",
"git... | Justintime50/github-archive | 3f94c8c23c85106986310d0b47c8d7c50818563c | Error Removing Git Repos that Timed Out On Windows
I'm using below command line
github-archive.exe --https -s [user] -t [key] -l c:\git-archive --clone
What happens for me:
- some very large starred repositories (https://github.com/jgraph/drawio) time out - there is an error during clone
- this leaves `jgr... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index a7f15f8..ebd6070 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -2,6 +2,8 @@
## NEXT RELEASE
+* Switches from the `threading` package to the `concurrent.futures` package allowing us to return values from each individual thread (in this case, the names of failed git a... |
Justintime50__github-archive-50 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"github_archive/archive.py:GithubArchive.__init__",
"github_archive/archive.py:GithubArchive.run",
"github_archive/archive.py:GithubArchive.initialize_project"
],
"edited_modu... | Justintime50/github-archive | c9374868e2206d09220d414800b057c037647c7f | Bulk forking
Is it possible to do bulk forking of all repos of an account? | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 5ec0a33..7998cd6 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -2,6 +2,8 @@
## NEXT RELEASE
+- Adds a new `--fork` CLI arg which adds support to fork the repos or gists specified via `users`, `orgs`, `stars`, or `gists`
+- Removed various shorthand CLI args to avoid... |
KE-works__pykechain-909 | [
{
"changes": {
"added_entities": [
"pykechain/models/widgets/widget.py:Widget._validate_excel_export_inputs",
"pykechain/models/widgets/widget.py:Widget.download_as_excel"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"pykechain/mode... | KE-works/pykechain | 44559c65e8dfdd35c6cd8b7c4d4c7540fa18fab8 | Move the `export activity to Excel` functions from built-in DK to Pykechain | diff --git a/CHANGELOG.rst b/CHANGELOG.rst
index 368725bd..5cbdb447 100644
--- a/CHANGELOG.rst
+++ b/CHANGELOG.rst
@@ -1,6 +1,8 @@
Change Log
==========
+* :star: Implemented `download_as_excel` method to the `Widget` class, to export any grid widget as an Excel file.
+
* :bug: Removed multiple `return` statements... |
KIT-IAI__pyWATTS-108 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pywatts/modules/rolling_base.py:RollingBase.__init__",
"pywatts/modules/rolling_base.py:RollingBase.transform"
],
"edited_modules": [
"pywatts/modules/rolling_base.py:Rolling... | KIT-IAI/pyWATTS | 9151c419b1dd03a514bc0c9d1a361f47c4fa671e | Mask in rolling_base does not work for weekends and or public holidays
**Describe the bug**
The mask in rolling_base does not works for weekends and public holidays. All values of weekends and public holidays are in the same group and not also grouped by the minute and the hour. | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 6ed8fab..5316d4c 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -20,6 +20,8 @@
* Missing call of _get_rolling in Rolling Base ([#76](https://github.com/KIT-IAI/pyWATTS/issues/76))
* Fix save and load of keras Wrapper ([#91](https://github.com/KIT-IAI/pyWATTS/issues/91... |
KIT-IAI__pyWATTS-110 | [
{
"changes": {
"added_entities": [
"pywatts/core/base_step.py:BaseStep._input_stopped"
],
"added_modules": null,
"edited_entities": [
"pywatts/core/base_step.py:BaseStep.__init__",
"pywatts/core/base_step.py:BaseStep.get_result",
"pywatts/core/base_step.py... | KIT-IAI/pyWATTS | 71961293aca113740f27133fab12e7d71bac9233 | Performance problems in online learning
**Describe the bug**
Online learning is currently slow - taking large amounts of time to process one step. It seems that a single processor is busy. This could be due to:
- Merging and copying of xarray.datasets.
- Predict/Transform of single datapoints by sklearn.
- Internal... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index e52e5da..73f8604 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -35,6 +35,13 @@
* Fix save and load of keras Wrapper ([#91](https://github.com/KIT-IAI/pyWATTS/issues/91))
* Import of pytorchWrapper via wrapper.__init__
* Fix the mask for weekends and public holidays i... |
KIT-IAI__pyWATTS-125 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pywatts/modules/rolling_metric_base.py:RollingMetricBase.transform"
],
"edited_modules": [
"pywatts/modules/rolling_metric_base.py:RollingMetricBase"
]
},
"file": "pywa... | KIT-IAI/pyWATTS | 703b2c581ab49be130e280ff0d3cf1f8864bd603 | RollingRMSE: Extraction time index from the wrong data
**Describe the bug**
In Line 79 we extract the time index from kwargs and use this time index on y. This leads to an error if the name of the time index in kwargs and y differs.
Similiar issue in line 85 and 86 where we set the name of the time_index to time. H... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 707f3cf..e3de7bd 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -32,6 +32,7 @@
* Fix save and load of keras Wrapper ([#91](https://github.com/KIT-IAI/pyWATTS/issues/91))
* Import of pytorchWrapper via wrapper.__init__
* Fix the mask for weekends and public holidays in... |
KIT-IAI__pyWATTS-128 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pywatts/core/pipeline.py:Pipeline.test",
"pywatts/core/pipeline.py:Pipeline.train",
"pywatts/core/pipeline.py:Pipeline._run"
],
"edited_modules": [
"pywatts/core/pipe... | KIT-IAI/pyWATTS | 6fd8bc9a74e775a2b1fb62b9337518aa5a728e5c | Ensure backward compatibility after summary feature
**What is your feature request related to?**
* Problem related
**Please describe the module/problem**
Due to the new summary feature pyWATTS is not backward compatible because `pipeline.train(..)` and `pipeline.test(..)` now return a tuple of `(data, summary)`.
... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 22454a5..e68c5eb 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -16,6 +16,7 @@
* Time needed by the fit method is recorded by the summary. (Part of the summary.md)
* Section about how to get results of a pyWATTS pipeline.
* Add MAECalculator as another error measur... |
KIT-IAI__pyWATTS-156 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pywatts/summaries/mae_summary.py:MAE._apply_metric"
],
"edited_modules": [
"pywatts/summaries/mae_summary.py:MAE"
]
},
"file": "pywatts/summaries/mae_summary.py"
},
... | KIT-IAI/pyWATTS | 66c902f6f678b4210b085cb5e899a81d5b9f10e4 | Calculate Metrics on cutouts
**What is your feature request related to?**
* Module request
**Please describe the module/problem**
Sometimes, it is useful to calculate a metric not only on the complete dataset but also on a cutout. This functionality is currently not available in the RMSE, MAE and so on.
**Des... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 6d1db58..5cbbe89 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,8 @@
## Unreleased
### Added
+* Metric can be calculated on cutouts ([#149](https://github.com/KIT-IAI/pyWATTS/issues/149))
+
### Changed
diff --git a/pywatts/summaries/mae_summary.py b/pywat... |
KIT-IAI__pyWATTS-188 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "examples/example.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pywatts/modules/... | KIT-IAI/pyWATTS | c1f3630a82ca099033b381acb4db2cbe4f990379 | Feature selection module
**What is your feature request related to?**
* Module request
**Please describe the module/problem**
A module to select features from a given feature space. Remove redundant features, keep features with high information value.
Possible approaches: filter, wrapper, hybrid
Possible sel... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 30be6e8..8edb432 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -11,6 +11,8 @@
### Changed
* Retraining is triggered after all steps are transformed ([#117](https://github.com/KIT-IAI/pyWATTS/issues/117))
+* The sklean-wrapper includes now methods based on the Selecto... |
KIT-IAI__pyWATTS-190 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "examples/example.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules... | KIT-IAI/pyWATTS | f85b3cc42a92d8403912edbb042fe5cd3f3b990b | [Online Learning] Fill buffer before online execution starts
**What is your feature request related to?**
* Problem related
**Please describe the module/problem**
If you simulate the online behaviour of modules and you use retraining, then it might happen that the relearning is triggered at the beginning of the ... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 30be6e8..8235e3f 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -7,10 +7,13 @@
* Metric can be calculated on cutouts ([#149](https://github.com/KIT-IAI/pyWATTS/issues/149))
* Add custom scaler module for pre-processing ([#167](https://github.com/KIT-IAI/pyWATTS/issues/1... |
KIT-IAI__pyWATTS-194 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pywatts/summaries/metric_base.py:MetricBase.transform"
],
"edited_modules": [
"pywatts/summaries/metric_base.py:MetricBase"
]
},
"file": "pywatts/summaries/metric_base.... | KIT-IAI/pyWATTS | 14499431fd122da41cab2b9489cf7a4d8997e11f | Execution on entire data as default for metric
**Describe the bug**
When using a summary for a metric (e.g. MAE) on a complete data set, ": complete" is added to its key due to line 91 in metric_base.py.
**To Reproduce**
Steps to reproduce the behavior:
Run metric on complete data set.
**Expected behavior**
T... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 373fece..bc043c7 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -25,6 +25,7 @@
* Fixed wrong check of if summary should be returned in _run method of pipeline ([#157](https://github.com/KIT-IAI/pyWATTS/issues/157))
* Fixed Pipeline.to_folder() for modules that store par... |
KIT-IAI__pyWATTS-207 | [
{
"changes": {
"added_entities": [
"pywatts/core/base.py:Base.get_min_data"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"pywatts/core/base.py:Base"
]
},
"file": "pywatts/core/base.py"
},
{
"changes": {
"added_en... | KIT-IAI/pyWATTS | c9301aa529cf5c26a3f9a3af330ce2a3daf637d2 | [Online Learning] Modules has to specify how much past data they need.
Some modules need multiple value to calculate the current value. E.g. rolling_mean and sample_module. However, the current online/batch learning approach only provides the past batch as input, which might not be enough.
## Solution:
* [ ] The m... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 3c9218b..fb7cd5b 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -12,6 +12,7 @@
* Enable Multiple RefitConditions ([#192](https://github.com/KIT-IAI/pyWATTS/issues/192))
* Periodic Refit Condition ([#192](https://github.com/KIT-IAI/pyWATTS/issues/192))
* Add AnomalyGene... |
KIT-IAI__pyWATTS-208 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "examples/example_keras.py"
},
{
"changes": {
"added_entities": [
"pywatts/core/base.py:Base.get_min_data"
],
"added_modules"... | KIT-IAI/pyWATTS | c9301aa529cf5c26a3f9a3af330ce2a3daf637d2 | Storage of custom keras loss function
**Describe the bug**
If pipeline.to_folder is called on a pipeline which contains a KerasWrapper with a custom loss function, then pyWATTS fails.
**To Reproduce**
Steps to reproduce the behavior:
1. Build a NN with Keras with a custom loss functoin
2. Add the NN and the cus... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 3c9218b..373fece 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -12,6 +12,7 @@
* Enable Multiple RefitConditions ([#192](https://github.com/KIT-IAI/pyWATTS/issues/192))
* Periodic Refit Condition ([#192](https://github.com/KIT-IAI/pyWATTS/issues/192))
* Add AnomalyGene... |
KIT-IAI__pyWATTS-225 | [
{
"changes": {
"added_entities": [
"pywatts/modules/feature_extraction/rolling_mean.py:RollingMean.__init__",
"pywatts/modules/feature_extraction/rolling_mean.py:RollingMean.get_params",
"pywatts/modules/feature_extraction/rolling_mean.py:RollingMean.set_params"
],
"add... | KIT-IAI/pyWATTS | 06908b250b5b69c16977282b5201f111ccdb891a | EWMA option for rolling_mean
**What is your feature request related to?**
* Module request
**Please describe the module/problem**
Enable a EWMA Profile. Thus, add an alpha value to the rolling_mean.
**What type of Feature Request**
* Module request,
| diff --git a/CHANGELOG.md b/CHANGELOG.md
index 3e43c40..b5faf26 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,4 +1,9 @@
# Changelog
+## 0.3.1 Unreleased
+
+### Added
+* Add alpha to rolling mean ([#225](https://github.com/KIT-IAI/pyWATTS/issues/225))
+
## 0.3.0 - 2022-31-03
diff --git a/pywatts/modules/featu... |
KIT-IAI__pyWATTS-231 | [
{
"changes": {
"added_entities": [
"pywatts/modules/models/profile_neural_network.py:ProfileNeuralNetwork._get_inputs"
],
"added_modules": null,
"edited_entities": [
"pywatts/modules/models/profile_neural_network.py:ProfileNeuralNetwork.transform",
"pywatts/module... | KIT-IAI/pyWATTS | 73b197275c208a9724a7dffd21663d0d3c56b4d5 | Enable PNN without weather information
**What is your feature request related to?**
* Module request
**Please describe the module/problem**
I would like to use the PNN without weather information. Perhaps, the input can be made flexible. | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 6870644..c4fb783 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -7,6 +7,8 @@
* Add a module for statistic feature extraction ([#217](https://github.com/KIT-IAI/pyWATTS/issues/217))
* Add a module for inserting synthetic concept drift ([#226](https://github.com/KIT-IAI/p... |
KIT-IAI__pyWATTS-261 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pywatts/modules/postprocessing/merger.py:Merger._align_temporal"
],
"edited_modules": [
"pywatts/modules/postprocessing/merger.py:Merger"
]
},
"file": "pywatts/modules/... | KIT-IAI/pyWATTS | 1faa4ccf48ece96e77a33d479eca6b64b776aad9 | Merger does not work (merges in the wrong direction) | diff --git a/pywatts/modules/postprocessing/merger.py b/pywatts/modules/postprocessing/merger.py
index 5260efd..10754ba 100644
--- a/pywatts/modules/postprocessing/merger.py
+++ b/pywatts/modules/postprocessing/merger.py
@@ -84,7 +84,7 @@ class Merger(BaseTransformer):
r = []
for i in range(horizon):
... |
KIT-IAI__pyWATTS-41 | [
{
"changes": {
"added_entities": [
"pywatts/callbacks/debug_callback.py:StatisticCallback.__init__"
],
"added_modules": null,
"edited_entities": [
"pywatts/callbacks/debug_callback.py:StatisticCallback.__call__"
],
"edited_modules": [
"pywatts/callback... | KIT-IAI/pyWATTS | 35982f34725135adef011c33ac61af5cdebf1b59 | The summary function writes to a file (instead of printing)
**What is your feature request related to?**
* Problem related
**Please describe the problem**
It is possible to print out a summary of the data set in the latest step with the flag `summary = true`. Currently, this summary is simply printed and not saved... | diff --git a/pywatts/callbacks/debug_callback.py b/pywatts/callbacks/debug_callback.py
index df55b0b..d8ab1f3 100644
--- a/pywatts/callbacks/debug_callback.py
+++ b/pywatts/callbacks/debug_callback.py
@@ -1,5 +1,5 @@
import xarray as xr
-from typing import Dict
+from typing import Dict, Optional
from pywatts.callba... |
KIT-IAI__pyWATTS-62 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pywatts/modules/root_mean_squared_error.py:RmseCalculator.__init__",
"pywatts/modules/root_mean_squared_error.py:RmseCalculator.get_params",
"pywatts/modules/root_mean_squared_error.py:R... | KIT-IAI/pyWATTS | 31b5b04c028d793ffe13048b0e2dafa5d03bb1bb | Documentation of RMSE Module is outdated
The documentation of the RMSE module is outdated
| diff --git a/pywatts/modules/root_mean_squared_error.py b/pywatts/modules/root_mean_squared_error.py
index 0eabc2d..12105d2 100644
--- a/pywatts/modules/root_mean_squared_error.py
+++ b/pywatts/modules/root_mean_squared_error.py
@@ -10,33 +10,31 @@ from pywatts.utils._xarray_time_series_utils import _get_time_indeces
... |
KIT-IAI__pyWATTS-66 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pywatts/wrapper/function_module.py:FunctionModule.transform"
],
"edited_modules": [
"pywatts/wrapper/function_module.py:FunctionModule"
]
},
"file": "pywatts/wrapper/fu... | KIT-IAI/pyWATTS | 41fe40037111461907cd815362743df44449619d | FunctionModule uses old API
**Describe the bug**
The transform module of the FunctionModule takes only x, we should change it to kwargs which are then passed to the wrapped function.
**Expected behavior**
The transform methods takes multiple key word arguments and passes them to the wrapped function
| diff --git a/pywatts/wrapper/function_module.py b/pywatts/wrapper/function_module.py
index 558973c..8d14590 100644
--- a/pywatts/wrapper/function_module.py
+++ b/pywatts/wrapper/function_module.py
@@ -9,7 +9,8 @@ from pywatts.core.filemanager import FileManager
class FunctionModule(BaseTransformer):
"""
- Th... |
KIT-IAI__pyWATTS-68 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pywatts/modules/sample_module.py:Sampler.__init__",
"pywatts/modules/sample_module.py:Sampler.get_params",
"pywatts/modules/sample_module.py:Sampler.set_params",
"pywatts/modules... | KIT-IAI/pyWATTS | 5caece95676b6e8a981f9d72dfae87247c41e8fd | data_var_name parameter of sample module is not needed any more
**Describe the bug**
The data_var_name parameter of the sample module was needed for the old API. The new api do not need it any more.
**Expected behavior**
Remove the paramter data_var_names
| diff --git a/CHANGELOG.md b/CHANGELOG.md
index 149d4bd..3df65fe 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -19,7 +19,7 @@
* Fixed pipeline crashing in RMSE module because of wrong time index ([#39](https://github.com/KIT-IAI/pyWATTS/issues/39))
* Fixed bracket operator not working for steps within the pipeli... |
KIT-IAI__pyWATTS-79 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pywatts/modules/rolling_base.py:RollingBase.transform"
],
"edited_modules": [
"pywatts/modules/rolling_base.py:RollingBase"
]
},
"file": "pywatts/modules/rolling_base.p... | KIT-IAI/pyWATTS | 0818b1cad73d749c8d4ac6e8c983b53432bda7fc | RollingGroupBy WeekdayWeekend and WeekdayWeekendAndHoliday do not work for variance, skewness and kurtosis
**Describe the bug**
If RollingGroupBy.WeekdayWeekend or WeekdayWeekendAndHoliday are specified for RollingVariance RollingSkewness or RollingKurtosis, the RollingMean is calculated
**To Reproduce**
Steps to ... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 683a278..a9a2940 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -11,6 +11,8 @@
### Deprecated
### Fixed
+* Missing call of _get_rolling in Rolling Base ([#76](https://github.com/KIT-IAI/pyWATTS/issues/76))
+
## 0.1.0 - 2021-25-03
diff --git a/pywatts/modules/rol... |
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