instance_id stringlengths 10 57 | file_changes listlengths 1 15 | repo stringlengths 7 53 | base_commit stringlengths 40 40 | problem_statement stringlengths 11 52.5k | patch stringlengths 251 7.06M |
|---|---|---|---|---|---|
datalad__datalad-next-149 | [
{
"changes": {
"added_entities": null,
"added_modules": [
"datalad_next/exceptions.py:UrlTargetNotFound"
],
"edited_entities": null,
"edited_modules": null
},
"file": "datalad_next/exceptions.py"
},
{
"changes": {
"added_entities": null,
"added_m... | datalad/datalad-next | cb4aca3d5eb7c13d58fb44c504a89ad3d195a743 | `UrlOperations.sniff()` exceptions should distinguish connection error from access error
When a URL works in principle, but points to something that is just not there (e.g. HTTP404) vs we cannot tell right now (HTTP5xx, or network down).
This is needed for a reliable operation of CHECKPRESENT in git-annex special re... | diff --git a/datalad_next/exceptions.py b/datalad_next/exceptions.py
index 85015a3..4e99d16 100644
--- a/datalad_next/exceptions.py
+++ b/datalad_next/exceptions.py
@@ -4,8 +4,17 @@ from datalad.runner import CommandError
from datalad.support.exceptions import (
AccessDeniedError,
AccessFailedError,
- NoD... |
datalad__datalad-next-164 | [
{
"changes": {
"added_entities": [
"datalad_next/annexremote/uncurl.py:UncurlRemote._store_delete"
],
"added_modules": null,
"edited_entities": [
"datalad_next/annexremote/uncurl.py:UncurlRemote.checkurl",
"datalad_next/annexremote/uncurl.py:UncurlRemote.transfer_... | datalad/datalad-next | a4c98425e0cb637a9d3a88cd631136a6c53a64d1 | Test uncurl remote with chunking | diff --git a/datalad_next/annexremote/uncurl.py b/datalad_next/annexremote/uncurl.py
index 557de86..256cb63 100644
--- a/datalad_next/annexremote/uncurl.py
+++ b/datalad_next/annexremote/uncurl.py
@@ -151,17 +151,29 @@ for composing URLs via a template.
- ``annex_remoteuuid`` - UUID of the special remote (location) us... |
datalad__datalad-next-222 | [
{
"changes": {
"added_entities": [
"datalad_next/url_operations/any.py:AnyUrlOperations._load_handler_registery"
],
"added_modules": null,
"edited_entities": [
"datalad_next/url_operations/any.py:AnyUrlOperations.__init__",
"datalad_next/url_operations/any.py:AnyU... | datalad/datalad-next | cf24cdd44120928e23a35463981744114f0b02eb | Allow for URL handler definition in config
Presently `AnyUrlOperations` only consults a runtime/code registry. We could...
Specify URL handlers in configuration:
The items would be of syntax: `datalad.url-handler.<regex>.<property>`,
where `<regex>` is a match expression when to apply a particular handler.
Pu... | diff --git a/datalad_next/url_operations/any.py b/datalad_next/url_operations/any.py
index 7ab94ad..c91d94a 100644
--- a/datalad_next/url_operations/any.py
+++ b/datalad_next/url_operations/any.py
@@ -4,18 +4,14 @@
from __future__ import annotations
from importlib import import_module
+import json
import logging
... |
datalad__datalad-next-231 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"datalad_next/annexremotes/uncurl.py:UncurlRemote.checkurl",
"datalad_next/annexremotes/uncurl.py:UncurlRemote.checkpresent"
],
"edited_modules": [
"datalad_next/annexremotes/... | datalad/datalad-next | ee46bc4c1c001acb778139b19f6fa103a5d8b51f | Rename URL operation `sniff()` -> `stat()`
More commonly understood. | diff --git a/README.md b/README.md
index ff46261..d7aae95 100644
--- a/README.md
+++ b/README.md
@@ -73,7 +73,7 @@ package and its commands.
- New modular framework for URL operations. This framework directly supports operation
on `http(s)`, `ssh`, and `file` URLs, and can be extended with custom functionality
f... |
datalad__datalad-next-257 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"datalad_next/credman/manager.py:CredentialManager.get",
"datalad_next/credman/manager.py:CredentialManager._assign_credential_type"
],
"edited_modules": [
"datalad_next/credm... | datalad/datalad-next | 9db27268e574f55d655d5daf245c193439d17675 | Better support for lonely token credential specification
```sh
DATALAD_CREDENTIAL_MIKE_TOKEN=some datalad credentials get mike
mike(secret ✗): [token=some]
```
So right now it considers it to be a credential, but a credential without a secret and a `token` property.
This is suboptimal. This means that tokens c... | diff --git a/datalad_next/credman/manager.py b/datalad_next/credman/manager.py
index 4d4167f..167a64c 100644
--- a/datalad_next/credman/manager.py
+++ b/datalad_next/credman/manager.py
@@ -201,8 +201,9 @@ class CredentialManager(object):
# no secret, no credential
if any(not p.startswith('_') ... |
datalad__datalad-next-278 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"datalad_next/constraints/base.py:_MultiConstraint.__repr__"
],
"edited_modules": [
"datalad_next/constraints/base.py:_MultiConstraint"
]
},
"file": "datalad_next/constr... | datalad/datalad-next | efe9fb30713f4b9f505fa2aa27203255a52883db | EnsureGeneratorFromFileLike should not stop on exception
Right now any invalid input will cause it to stop and raise.
However for any batch mode application it would be essential to be able to ignore errors and/or simply report on them
The implementation should be changed to yield (not raise) a special value. Lik... | diff --git a/datalad_next/constraints/base.py b/datalad_next/constraints/base.py
index cd2bdad..d82c994 100644
--- a/datalad_next/constraints/base.py
+++ b/datalad_next/constraints/base.py
@@ -87,10 +87,6 @@ class _MultiConstraint(Constraint):
EnsureNone() if c is None else c for c in constraints
... |
datalad__datalad-next-292 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"datalad_next/commands/download.py:Download"
]
},
"file": "datalad_next/commands/download.py"
},
{
"changes": {
"added_entities": null,
"ad... | datalad/datalad-next | 10b5d92d48c0f2d801f9ae88373bc8bbcbceb40d | Implement `AltConstraints.__or__` not `__ior__`
This is the sibling of https://github.com/datalad/datalad/issues/7164.
I think the real issue is that the current implementation matches the semantics of `__ior__()` and not `__or__()`.
And this needs to be fixed. | diff --git a/datalad_next/commands/download.py b/datalad_next/commands/download.py
index 03d464b..4f91ccd 100644
--- a/datalad_next/commands/download.py
+++ b/datalad_next/commands/download.py
@@ -8,7 +8,6 @@ from pathlib import (
Path,
PurePosixPath,
)
-from typing import Dict
from urllib.parse import urlp... |
datalad__datalad-next-362 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"datalad_next/constraints/exceptions.py:ParameterConstraintContext.get_label_with_parameter_values"
],
"edited_modules": [
"datalad_next/constraints/exceptions.py:ParameterConstraintC... | datalad/datalad-next | 46db8c6669b8a57eebf85bf001043ac1b4851f2d | Insufficient arguments not handled well in `EnsureCommandParameterization`
Not given all mandatory arguments via the Python API results in a plain
```
CommandParametrizationError: 0 command parameter constraint violation
```
while the CLI (where argparse is intercepting this immediately) provides a usage synops... | diff --git a/datalad_next/constraints/exceptions.py b/datalad_next/constraints/exceptions.py
index a3e4d9a..2955c50 100644
--- a/datalad_next/constraints/exceptions.py
+++ b/datalad_next/constraints/exceptions.py
@@ -273,8 +273,14 @@ class ParameterConstraintContext:
"""Like ``.label`` but each parameter will ... |
datalad__datalad-next-365 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"datalad_next/url_operations/http.py:HttpUrlOperations._stream_download_from_request"
],
"edited_modules": [
"datalad_next/url_operations/http.py:HttpUrlOperations"
]
},
... | datalad/datalad-next | 944ecdb003b550f1a0da9162fcc66481d5d306fe | http-downloads via `download` (`HttpUrlOperations`) result in gzipped files on disk | diff --git a/datalad_next/url_operations/http.py b/datalad_next/url_operations/http.py
index 8d31c03..63ddb89 100644
--- a/datalad_next/url_operations/http.py
+++ b/datalad_next/url_operations/http.py
@@ -9,7 +9,6 @@ import sys
from typing import Dict
import requests
from requests_toolbelt import user_agent
-from re... |
datalad__datalad-next-381 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "datalad_next/types/annexkey.py"
}
] | datalad/datalad-next | 85250d5fce519e9ef54ecaff2a970958807197f0 | `AnnexKey` should be hashable
I would think that using this type as a key in a mapping would be a standard use case. It would require the following change:
```diff
diff --git a/datalad_next/types/annexkey.py b/datalad_next/types/annexkey.py
index 74bbcb6..5a85342 100644
--- a/datalad_next/types/annexkey.py
+++ b... | diff --git a/datalad_next/types/annexkey.py b/datalad_next/types/annexkey.py
index 74bbcb6..037280b 100644
--- a/datalad_next/types/annexkey.py
+++ b/datalad_next/types/annexkey.py
@@ -1,3 +1,5 @@
+"""git-annex key representation"""
+
from __future__ import annotations
from dataclasses import dataclass
@@ -14,7 +16... |
datalad__datalad-next-583 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "datalad_next/commands/ls_file_collection.py"
},
{
"changes": {
"added_entities": [
"datalad_next/iter_collections/gittree.py:GitTreeItem... | datalad/datalad-next | a27a4eb91844a305056d042cc32eb8720c814609 | Double check and document (if needed) `.name` conventions for `iter_collections`
I cannot put my finger on it, but I feel the nature of the value of `.name` for a reported item is non-uniform.
I am not aware of a documentation for the convention, if how iterators should behave.
The `.name` should always be a `Pur... | diff --git a/datalad_next/commands/ls_file_collection.py b/datalad_next/commands/ls_file_collection.py
index 9748cbf..5b1f4b9 100644
--- a/datalad_next/commands/ls_file_collection.py
+++ b/datalad_next/commands/ls_file_collection.py
@@ -57,7 +57,6 @@ from datalad_next.iter_collections.utils import (
)
from datalad_ne... |
datalayer__jupyter-server-nbmodel-9 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "jupyter_server_config.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"jupyter_ser... | datalayer/jupyter-server-nbmodel | 77cdb6f58b5d851549aedff515a04d7e7d11b920 | Should code be executed asynchronously in RTC mode?
<!--
Welcome! Thanks for thinking of a way to improve Datalayer. If this solves a problem for you, then it probably solves that problem for lots of people! So the whole community will benefit from this request.
Before creating a new feature request please search t... | diff --git a/.gitignore b/.gitignore
index 1048b01..795efd7 100644
--- a/.gitignore
+++ b/.gitignore
@@ -101,3 +101,4 @@ dmypy.json
# OSX files
.DS_Store
.jupyter_ystore.db
+.vscode
diff --git a/README.md b/README.md
index 7916d4a..4934ec9 100644
--- a/README.md
+++ b/README.md
@@ -34,6 +34,83 @@ that the server ext... |
datapythonista__mnist-12 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"mnist/__init__.py:download_file"
],
"edited_modules": [
"mnist/__init__.py:download_file"
]
},
"file": "mnist/__init__.py"
}
] | datapythonista/mnist | aeae1406afea11c1c23788f23856053edcfc536b | Allowing specification of the download directory
Right now the functions listed on the README.md doesn't allow specifying the target directory. This functionality should be possible just by propagating extra parameters to the download function. | diff --git a/README.md b/README.md
index b164037..80a9d4e 100644
--- a/README.md
+++ b/README.md
@@ -63,4 +63,18 @@ train_images = mnist.train_images()
x = images.reshape((images.shape[0], images.shape[1] * images.shape[2]))
```
+Both the url where the files can be found, and the temporary directory where
+they wil... |
datasciencecampus__parliai-public-26 | [
{
"changes": {
"added_entities": [
"src/parliai_public/readers/base.py:BaseReader._check_response"
],
"added_modules": null,
"edited_entities": [
"src/parliai_public/readers/base.py:BaseReader.__init__",
"src/parliai_public/readers/base.py:BaseReader.analyse"
... | datasciencecampus/parliai-public | b82328f4b2511783149cfd57393cda1c24f158d8 | Add post-processing step to verify the LLM output is present in original content verbatim | diff --git a/README.md b/README.md
index e142eac..dbe6dfb 100644
--- a/README.md
+++ b/README.md
@@ -55,7 +55,9 @@ Once pre-commits are activated, whenever you commit to this repository a series
## Usage
[theyworkforyou.com](https://www.theyworkforyou.com)
-By default, parliamentary content from the previous day (a... |
datosgobar__pydatajson-124 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pydatajson/ckan_utils.py:map_dataset_to_package"
],
"edited_modules": [
"pydatajson/ckan_utils.py:map_dataset_to_package"
]
},
"file": "pydatajson/ckan_utils.py"
},
... | datosgobar/pydatajson | 70ed537996200a79c3d3f16d4862160731314dac | Agregar opción para mover `theme` a `keyword` en `push_dataset_to_ckan`
**Contexto**
Los temas específicos (`theme`) son temas que tienen sentido dentro del contexto y dominio temático bajo el cual cada nodo original opera. Sirven para clasificar a sus datasets según categorías temáticas específicas a la problemática ... | diff --git a/docs/MANUAL.md b/docs/MANUAL.md
index 556645c..2191b01 100644
--- a/docs/MANUAL.md
+++ b/docs/MANUAL.md
@@ -94,6 +94,8 @@ Toma los siguientes parámetros:
- **portal_url**: URL del portal de CKAN de destino.
- **apikey**: La apikey de un usuario del portal de destino con los permisos para crear el dat... |
datosgobar__pydatajson-125 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pydatajson/ckan_utils.py:map_dataset_to_package"
],
"edited_modules": [
"pydatajson/ckan_utils.py:map_dataset_to_package"
]
},
"file": "pydatajson/ckan_utils.py"
},
... | datosgobar/pydatajson | 3c428354f3f1b48b9b70815ba370e8cd1b11b07b | Agregar opción para copiar `superTheme` a `theme` en `push_dataset_to_ckan`
**Contexto**
Los temas globales (`superTheme`) son temas transversales bajo los cuales los nodos originales clasifican a sus datasets para indexarlos en un nodo integrador.
El `superTheme` de un dataset en su nodo original, es el `theme` de e... | diff --git a/docs/MANUAL.md b/docs/MANUAL.md
index 2191b01..39d9678 100644
--- a/docs/MANUAL.md
+++ b/docs/MANUAL.md
@@ -94,8 +94,11 @@ Toma los siguientes parámetros:
- **portal_url**: URL del portal de CKAN de destino.
- **apikey**: La apikey de un usuario del portal de destino con los permisos para crear el da... |
datosgobar__pydatajson-126 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pydatajson/ckan_utils.py:map_dataset_to_package",
"pydatajson/ckan_utils.py:map_distributions_to_resources"
],
"edited_modules": [
"pydatajson/ckan_utils.py:map_dataset_to_pa... | datosgobar/pydatajson | c71794df9f7e570d86394a7af9f038aeb85b64d4 | Agregar opción para copiar el `identifier` original, sin prependear el `catalog_id`
**Contexto**
Poder escribir un dataset con su identifier original es útil para utilizar la función no como federador, sino como forma de restaurar los metadatos de un dataset a partir de un backup anterior.
**Propuesta**
Agregar un a... | diff --git a/docs/MANUAL.md b/docs/MANUAL.md
index 39d9678..cd72809 100644
--- a/docs/MANUAL.md
+++ b/docs/MANUAL.md
@@ -87,13 +87,14 @@ Existen dos métodos, cuyos reportes se incluyen diariamente entre los archivos
### Métodos para federación de datasets
- **pydatajson.DataJson.push_dataset_to_ckan()**: Copia la m... |
datosgobar__pydatajson-131 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pydatajson/ckan_utils.py:map_dataset_to_package"
],
"edited_modules": [
"pydatajson/ckan_utils.py:map_dataset_to_package"
]
},
"file": "pydatajson/ckan_utils.py"
},
... | datosgobar/pydatajson | ef99387305d7cd46831c715c7a443f4b056baeb4 | Robustecer el manejo de themes por parte de push_dataset_to_ckan()
Este es un issue que hace referencia al 24 de monitoreo apertura:
https://github.com/datosgobar/monitoreo-apertura/issues/24
Lo abro acá porque me parece que es más apropiado discutirlo en este repo.
----------------------------------------------... | diff --git a/pydatajson/ckan_utils.py b/pydatajson/ckan_utils.py
index f71570d..9724f44 100644
--- a/pydatajson/ckan_utils.py
+++ b/pydatajson/ckan_utils.py
@@ -1,6 +1,8 @@
#!/usr/bin/env python
# -*- coding: utf-8 -*-
import json
+import re
+import sys
from datetime import time
from dateutil import parser, tz
fr... |
datosgobar__pydatajson-153 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pydatajson/federation.py:harvest_catalog_to_ckan"
],
"edited_modules": [
"pydatajson/federation.py:harvest_catalog_to_ckan"
]
},
"file": "pydatajson/federation.py"
}
... | datosgobar/pydatajson | dae546a739eb2aab1c34b3d8bbb5896fe804e0aa | Robustecer el manejo de harvest_catalog_to_ckan()
Hay que corregir 2 problemas:
- En caso de pasar una lista vacía en el dataset list, no se debe federar ningún dataset. Actualmente se federan todos.
-En caso de que alguno de las llamadas a `harvest_dataset_to_ckan()` falle, loggear y continuar con el resto. Actu... | diff --git a/pydatajson/federation.py b/pydatajson/federation.py
index 43e932e..b503d95 100644
--- a/pydatajson/federation.py
+++ b/pydatajson/federation.py
@@ -5,11 +5,13 @@ de la API de CKAN.
"""
from __future__ import print_function
+import logging
from ckanapi import RemoteCKAN
-from ckanapi.errors import NotF... |
datosgobar__pydatajson-191 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pydatajson/ckan_reader.py:read_ckan_catalog",
"pydatajson/ckan_reader.py:add_superTheme",
"pydatajson/ckan_reader.py:map_resource_to_distribution",
"pydatajson/ckan_reader.py:map... | datosgobar/pydatajson | 91872076f46aa9a1b3cfbd7206c278d5ebf3bbc2 | Agregar algunos tests a módulos no testeados
Como `ckan_reader`. | diff --git a/pydatajson/ckan_reader.py b/pydatajson/ckan_reader.py
index 88711e7..cb2bf0f 100644
--- a/pydatajson/ckan_reader.py
+++ b/pydatajson/ckan_reader.py
@@ -64,7 +64,7 @@ def read_ckan_catalog(portal_url):
# agrega un nuevo dataset a la lista
packages.append(portal.call_action(
- ... |
datosgobar__pydatajson-210 | [
{
"changes": {
"added_entities": [
"pydatajson/federation.py:get_organizations_from_ckan"
],
"added_modules": [
"pydatajson/federation.py:get_organizations_from_ckan"
],
"edited_entities": null,
"edited_modules": null
},
"file": "pydatajson/federation.... | datosgobar/pydatajson | 3b9447bbe8f4250cc1b3def1e014f67c4fca0eb0 | Get organizations from ckan
El objetivo es implementar un método que pasada la url de un portal, devuelva las organizaciones presentes completas con su jerarquía. | diff --git a/docs/MANUAL.md b/docs/MANUAL.md
index 207d9fe..e03b74f 100644
--- a/docs/MANUAL.md
+++ b/docs/MANUAL.md
@@ -428,6 +428,15 @@ Toma los siguientes parámetros:
portal de destino. Si no se pasa, se toma como organización el catalog_id
Retorna el id en el nodo de destino de los datasets federados.
+
+... |
datosgobar__pydatajson-211 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "pydatajson/__init__.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pydatajson/ba... | datosgobar/pydatajson | 185d79d95555dd3041404b208a09583cb95a9a19 | Push organizations to ckan
Dado un árbol jerárquico de organizaciones, el objetivo es crear las organizaciones allí descriptas, manteniendo la jerarquía original | diff --git a/.gitignore b/.gitignore
index e6e7bf3..35e9136 100644
--- a/.gitignore
+++ b/.gitignore
@@ -74,7 +74,6 @@ TODO.md
# Archivos temporales de prueba
tests/temp/*
-tests/results/catalog/*
.ipynb_checkpoints
samples/archivos-generados/*
.DS_Store
diff --git a/HISTORY.md b/HISTORY.md
index f99fae6..ae1624... |
datosgobar__pydatajson-212 | [
{
"changes": {
"added_entities": [
"pydatajson/federation.py:get_organization_from_ckan"
],
"added_modules": [
"pydatajson/federation.py:get_organization_from_ckan"
],
"edited_entities": null,
"edited_modules": null
},
"file": "pydatajson/federation.py... | datosgobar/pydatajson | bcc401111ada65362839f1f92490198ddc5d94ea | Get organization from ckan
El objetivo es implementar un método que devuelva la información de una organizacion a partir de su nombre o id y la url del portal pasado por parametro. | diff --git a/docs/MANUAL.md b/docs/MANUAL.md
index 8a0c2f6..a84878b 100644
--- a/docs/MANUAL.md
+++ b/docs/MANUAL.md
@@ -438,6 +438,16 @@ Toma los siguientes parámetros:
Retorna una lista de diccionarios con la información de las organizaciones. Recursivamente, dentro del campo `children`,
se encuentran las organ... |
datosgobar__pydatajson-213 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pydatajson/backup.py:make_catalog_backup"
],
"edited_modules": [
"pydatajson/backup.py:make_catalog_backup"
]
},
"file": "pydatajson/backup.py"
},
{
"changes": ... | datosgobar/pydatajson | ac551b939a944f2e0bbabfef546672ae243233b2 | Push organization to ckan
El objetivo es implementar un método que tome la data de una organización y cree via API la organización en un andino pasado por parámetro | diff --git a/docs/MANUAL.md b/docs/MANUAL.md
index a84878b..9c97bb2 100644
--- a/docs/MANUAL.md
+++ b/docs/MANUAL.md
@@ -461,6 +461,20 @@ parámetros:
Retorna el árbol de organizaciones creadas. Cada nodo tiene un campo `success` que indica si fue creado exitosamente o
no. En caso de que `success` sea False, los h... |
datosgobar__pydatajson-293 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "pydatajson/constants.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pydatajson/h... | datosgobar/pydatajson | 7ac9d34f7ecfe7b9804eba44626c7ac15606f09a | Modificar criterio de análisis de broken URL: es válida a menos que 4xx o 5xx
Excepciones: 429 "Too Many Requests" no se debe considerar broken. | diff --git a/pydatajson/constants.py b/pydatajson/constants.py
index dc49ecb..cbfbd03 100644
--- a/pydatajson/constants.py
+++ b/pydatajson/constants.py
@@ -1,6 +1,7 @@
REQUESTS_TIMEOUT = 30
DEFAULT_TIMEZONE = "America/Buenos_Aires"
-VALID_STATUS_CODES = [200, 203, 302]
+INVALID_STATUS_CODES_REGEX = ["^4[0-9]+$", "... |
datosgobar__series-tiempo-ar-40 | [
{
"changes": {
"added_entities": [
"series_tiempo_ar/validations/csv_validations.py:ValidationOptions.__init__",
"series_tiempo_ar/validations/csv_validations.py:ValidationOptions.create_with_defaults",
"series_tiempo_ar/validations/csv_validations.py:BaseValidation.__init__",
... | datosgobar/series-tiempo-ar | 8e83b67bcae145c7f3164493548649946e2581a4 | Implementar parámetros de validación modificables desde el admin de Django
Implica poder elegir los parámetros
MINIMUM_VALUES = 2
MAX_MISSING_PROPORTION = 0.999
MAX_TOO_SMALL_PROPORTION = 0.02
MIN_TEMPORAL_FRACTION = 10
MAX_FIELD_TITLE_LEN = 60
MAX_NULL_SERIES_PROPORTION = 0.20
desde el admin de Django, en ... | diff --git a/requirements_dev.txt b/requirements_dev.txt
index 4299463..6616c83 100644
--- a/requirements_dev.txt
+++ b/requirements_dev.txt
@@ -3,3 +3,4 @@ pylint
black
pyyaml
cryptography
+regex!=2019.12.9
diff --git a/series_tiempo_ar/validations/csv_validations.py b/series_tiempo_ar/validations/csv_validations.p... |
davebshow__goblin-54 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"goblin/element.py:VertexProperty.__init__"
],
"edited_modules": [
"goblin/element.py:VertexProperty"
]
},
"file": "goblin/element.py"
}
] | davebshow/goblin | cc152a9c8e5eca92715721ae26d0ec94703818a9 | Issues with Sphinx: `VertexProperty` Missing Attribute
Build failure in sphinx:
```
File "/lib/python3.5/site-packages/sphinx/ext/autodoc.py", line 862, in filter_members
not keep, self.options)
File "/lib/python3.5/site-packages/sphinx/application.py", line 593, in emit_firstresult
for result in sel... | diff --git a/goblin/element.py b/goblin/element.py
index a80d427..ff5e37b 100644
--- a/goblin/element.py
+++ b/goblin/element.py
@@ -178,6 +178,7 @@ class VertexProperty(Vertex, abc.BaseProperty):
self._data_type = data_type
self._default = default
self._db_name = db_name
+ self._val =... |
davebshow__goblin-65 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"goblin/properties.py:Integer.validate"
],
"edited_modules": [
"goblin/properties.py:Integer"
]
},
"file": "goblin/properties.py"
}
] | davebshow/goblin | 6328a004969d2cf02af9748045719020324bf8d5 | 64-bit Integer Properties
`goblin.Integer` uses the built-in python `int` for validating whether a given value is integer (https://github.com/davebshow/goblin/blob/master/goblin/properties.py#L175). However, this causes problems with 64-bit integers. For example, `list` and `set` cardinality creates `*VertexPropertyMan... | diff --git a/goblin/properties.py b/goblin/properties.py
index f803052..912bb20 100644
--- a/goblin/properties.py
+++ b/goblin/properties.py
@@ -172,6 +172,8 @@ class Integer(abc.DataType):
def validate(self, val):
if val is not None:
try:
+ if isinstance(val, long):
+ ... |
davidchall__topas2numpy-13 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"topas2numpy/binned.py:BinnedResult.__init__",
"topas2numpy/binned.py:BinnedResult._read_binary",
"topas2numpy/binned.py:BinnedResult._read_ascii"
],
"edited_modules": [
... | davidchall/topas2numpy | f20177d6930798e317033ab0e66117bb65ee08d6 | Detect best NumPy dtype (use unsigned int for SurfaceTrackCount)
When the TOPAS scorer mode is set to 'SurfaceTrackCount' then the result is an integer. It would be best if the numpy dtype of the loaded data was set to an unsigned integer type in this case.
It seems this library loads such arrrays as 'float64' type... | diff --git a/topas2numpy/binned.py b/topas2numpy/binned.py
index dac1dfe..2b65a6d 100644
--- a/topas2numpy/binned.py
+++ b/topas2numpy/binned.py
@@ -47,15 +47,15 @@ class BinnedResult(object):
dimensions: list of BinnedDimension objects
data: dict of scored data
"""
- def __init__(self, ... |
daviddrysdale__python-phonenumbers-182 | [
{
"changes": {
"added_entities": [
"python/phonenumbers/phonenumberutil.py:NumberParseException.__reduce__"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"python/phonenumbers/phonenumberutil.py:NumberParseException"
]
},
"file"... | daviddrysdale/python-phonenumbers | 5bcfeb70b6ae8d4ebe525999910f3180f6870807 | NumberParseException is not picklable
Hi,
I noticed that `NumberParseException` is not picklable. It deviates from the `__init__` signature of `Exception`, which itself implements `__reduce__` s.t. only the `msg` argument is pickled. This program:
```python
import pickle
from phonenumbers.phonenumberutil import... | diff --git a/python/phonenumbers/phonenumberutil.py b/python/phonenumbers/phonenumberutil.py
index 8ff04afd..0948934d 100644
--- a/python/phonenumbers/phonenumberutil.py
+++ b/python/phonenumbers/phonenumberutil.py
@@ -3223,6 +3223,9 @@ class NumberParseException(UnicodeMixin, Exception):
self.error_type = err... |
davidesarra__jupyter_spaces-15 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"jupyter_spaces/space.py:Space.execute"
],
"edited_modules": [
"jupyter_spaces/space.py:Space"
]
},
"file": "jupyter_spaces/space.py"
}
] | davidesarra/jupyter_spaces | 035e984dab3d6b29e46db982619a376c3c293b6a | Automatic console output
It would be great if space cells would automatically print their return result similar to a normal cell. Having to use the print statement for output is cumbersome. | diff --git a/README.md b/README.md
index 398cbb9..222a688 100644
--- a/README.md
+++ b/README.md
@@ -37,7 +37,7 @@ Reloading the extension will remove all spaces.
```python
%%space <space-name>
alpha = 0.50
-print(alpha)
+alpha
```
When you execute a cell within a space, all references are firstly searched in
@@... |
davidhalter__jedi-641 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"jedi/api/classes.py:BaseDefinition.params"
],
"edited_modules": [
"jedi/api/classes.py:BaseDefinition"
]
},
"file": "jedi/api/classes.py"
},
{
"changes": {
... | davidhalter/jedi | e0753da6f1ed83185b84c0f9ab65eed67c80dcb4 | 'Lambda' object has no attribute 'get_subscope_by_name'
Jedi 0.9.0, Python 2.7.3
Reproduction:
```Python
import jedi
script = """\
my_lambda = lambda x: x+1
my_lambda(1) ... | diff --git a/AUTHORS.txt b/AUTHORS.txt
index 64aae316..bc258d6b 100644
--- a/AUTHORS.txt
+++ b/AUTHORS.txt
@@ -33,5 +33,6 @@ Savor d'Isavano (@KenetJervet) <newelevenken@163.com>
Phillip Berndt (@phillipberndt) <phillip.berndt@gmail.com>
Ian Lee (@IanLee1521) <IanLee1521@gmail.com>
Farkhad Khatamov (@hatamov) <comsg... |
davidhalter__jedi-922 | [
{
"changes": {
"added_entities": [
"jedi/evaluate/compiled/mixed.py:source_findable"
],
"added_modules": [
"jedi/evaluate/compiled/mixed.py:source_findable"
],
"edited_entities": [
"jedi/evaluate/compiled/mixed.py:find_syntax_node_name"
],
"edite... | davidhalter/jedi | c1c3f35e08a2404814d0463a648c562c15f1beb6 | Slow completion for existing object with long `__repr__` method
Hi,
For completion with existing objects it seems that the `__repr__()` method is evaluated for an error message within the inspect module which is afterward caught. This makes the completion as slow as `__repr__()` while this evaluation in unnecessary ... | diff --git a/AUTHORS.txt b/AUTHORS.txt
index b5619dcb..52204a8b 100644
--- a/AUTHORS.txt
+++ b/AUTHORS.txt
@@ -43,6 +43,7 @@ bstaint (@bstaint)
Mathias Rav (@Mortal) <rav@cs.au.dk>
Daniel Fiterman (@dfit99) <fitermandaniel2@gmail.com>
Simon Ruggier (@sruggier)
+Élie Gouzien (@ElieGouzien)
Note: (@user) means a ... |
daviskirk__climatecontrol-9 | [
{
"changes": {
"added_entities": [
"climatecontrol/settings_parser.py:Settings.temporary_changes"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"climatecontrol/settings_parser.py:Settings"
]
},
"file": "climatecontrol/settings_... | daviskirk/climatecontrol | 26a70d6ca739c452639fe18816bf06ad24e4c4c6 | Function to save and restore settings (for testing)
This should allow creating a pytest fixture which undoes all changes to the Settings object after the test is finished.
Instead of a function, a context manager could be used instead. | diff --git a/README.rst b/README.rst
index 9df1ef9..2776c15 100644
--- a/README.rst
+++ b/README.rst
@@ -200,6 +200,29 @@ save it to a file like "cli.py" and then call it after installing click:
whithout needing to set any env vars.
+Testing
+-------
+
+When testing your application, different behaviours often dep... |
dbader__schedule-569 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"schedule/__init__.py:Job.__repr__"
],
"edited_modules": [
"schedule/__init__.py:Job"
]
},
"file": "schedule/__init__.py"
}
] | dbader/schedule | a3ecd3548aff70bef15a61baee0d2d7f22f57992 | Job __repr__ throws AttributeError when job_func is None
```
>>> s._job
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/path/to/my/virtualenv/site-packages/schedule/__init__.py", line 284, in __repr__
args = [repr(x) if is_repr(x) else str(x) for x in self.job_func.args]
Attr... | diff --git a/schedule/__init__.py b/schedule/__init__.py
index a73c6a6..2db9b0a 100644
--- a/schedule/__init__.py
+++ b/schedule/__init__.py
@@ -292,9 +292,13 @@ class Job:
job_func_name = self.job_func.__name__
else:
job_func_name = repr(self.job_func)
- args = [repr(x) if is_... |
dbcli__litecli-113 | [
{
"changes": {
"added_entities": [
"litecli/sqlexecute.py:utf8_resilient_decoder"
],
"added_modules": [
"litecli/sqlexecute.py:utf8_resilient_decoder"
],
"edited_entities": [
"litecli/sqlexecute.py:SQLExecute.connect"
],
"edited_modules": [
... | dbcli/litecli | a1a01c11d6154b6f841b81fbdeb6b8b887b697d3 | TabularOutputFormatter chokes on values that can't be converted to UTF-8 if it's a text column
I don't know how to solve this. If there is a single record with a non-convertible column it won't print anything.
`Could not decode to UTF-8 column 'verifier' with text '`'���U'`
sqlite3 prints
```
2bho15FMrSQhKAYnjBq... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index b8c8122..0ccb53a 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,7 +1,5 @@
## Unreleased - TBD
-<!-- add upcoming change notes here -->
-
### Features
- Add verbose feature to `favorite_query` command. (Thanks: [Zhaolong Zhu])
@@ -12,6 +10,7 @@
### Bug Fixes
... |
dbcli__litecli-191 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"litecli/packages/special/dbcommands.py:describe"
],
"edited_modules": [
"litecli/packages/special/dbcommands.py:describe"
]
},
"file": "litecli/packages/special/dbcomma... | dbcli/litecli | e58bbcd3c7e498e2efd3cd85e0b9ae5437a440a6 | The describe command fails with 'near "(": syntax error'
Any use of the describe command results in a syntax error.
```
dev.db> \d auth_user
near "(": syntax error
```
This is due to passing a tuple to `format()` instead of the string arg directly.
```
if arg:
args = (arg,)
query = ""... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 7bda87b..58f8192 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,14 +1,8 @@
-## Upcoming - TBD
-
-
-### Features
-
+## 1.12.4 - 2024-11-11
### Bug Fixes
-
-### Internal Changes
-
+* Fix the syntax error when `\d tbl` is used.
## 1.12.3 - 2024-09-10
@@ -17,7 +... |
dbcli__litecli-79 | [
{
"changes": {
"added_entities": [
"litecli/packages/completion_engine.py:_expecting_arg_idx"
],
"added_modules": [
"litecli/packages/completion_engine.py:_expecting_arg_idx"
],
"edited_entities": [
"litecli/packages/completion_engine.py:suggest_special"
... | dbcli/litecli | cd5d4e0cf9164a147c0c59f6f559347c851db5d6 | Support CSV import
SQLite [allows users to import data from CSV files][1]:
```sh
$ cat foo.csv
one,two,three
1,2,3
4,5,6
$ sqlite3 foo.db
SQLite version 3.22.0 2018-01-22 18:45:57
Enter ".help" for usage hints.
sqlite> .mode csv
sqlite> .import foo.csv foo
sqlite> .schema foo
CREATE TABLE foo(
"one" ... | diff --git a/.gitignore b/.gitignore
index ab7d02e..63c3eb6 100644
--- a/.gitignore
+++ b/.gitignore
@@ -6,6 +6,7 @@
/src
/test/behave.ini
/litecli_env
+/.venv
/.eggs
.vagrant
diff --git a/changelog.md b/changelog.md
index 7ef61d6..da703e3 100644
--- a/changelog.md
+++ b/changelog.md
@@ -1,3 +1,10 @@
+Upcomming:... |
dcs4cop__xcube-419 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube/core/normalize.py:normalize_dataset",
"xcube/core/normalize.py:_ensure_lat_decreasing",
"xcube/core/normalize.py:adjust_spatial_attrs"
],
"edited_modules": [
"x... | dcs4cop/xcube | e224598cc6face83a14f082246ca5df74bd7e03f | Writing to zarr fails with message "specified zarr chunks would overlap multiple dask chunks"
For some data it is necessary to rechunk it in order to deal with it efficiently. This rechunking process might result in that the final chunk of a dimension has a smaller size than the previous ones. E.g., if we have a dimens... | diff --git a/CHANGES.md b/CHANGES.md
index be15df9a..df4ef834 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -1,7 +1,11 @@
-## Changes in 0.7.1.dev1 (in development)
-
-* Added `s3fs` requirement that has been removed by accident.
-* Added missing requirements `requests` and `urllib3`.
+## Changes in 0.7.1
+
+* Dataset n... |
dcs4cop__xcube-582 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube/core/gen2/remote/config.py:ServiceConfig.from_file",
"xcube/core/gen2/remote/config.py:load_json_or_yaml_file"
],
"edited_modules": [
"xcube/core/gen2/remote/config.py:... | dcs4cop/xcube | f333bcec05206f59cbc342cbe22949afe1b374d5 | xcube gen2 DataStore configuration to understand env var references
I want to configure a data store which contains input files to be used xcube gen2 service generator. The data is located in an s3 bucket which is protected, so my configuration looks like the following:
```
my_data:
title: "My Data for xcube gen... | diff --git a/CHANGES.md b/CHANGES.md
index 9c10486d..2e66417b 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -1,5 +1,14 @@
## Changes in 0.9.3 (in development)
+* It is now possible to use environment variables in most
+ xcube configuration files. Unix bash syntax is used, i.e.
+ `${ENV_VAR_NAME}` or `$ENV_VAR_NAM... |
dcs4cop__xcube-633 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube/webapi/auth.py:_get_missing_scope"
],
"edited_modules": [
"xcube/webapi/auth.py:_get_missing_scope"
]
},
"file": "xcube/webapi/auth.py"
}
] | dcs4cop/xcube | b6a949e94d203808e14f46abf729f976c7b02367 | Allow granted permissions to be wildcards
**Is your feature request related to a problem? Please describe.**
For authorized clients, we require the xcube Web API to grant access to generic groups of datasets, rather than to lists of individual datasets only.
**Describe the solution you'd like**
A simple first ... | diff --git a/CHANGES.md b/CHANGES.md
index 20eef50e..a10bf9d7 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -2,6 +2,13 @@
### Enhancements
+* For authorized clients, the xcube Web API provided by `xcube serve`
+ now allows granted scopes to contain wildcard characters `*`, `**`,
+ and `?`. This is useful to give a... |
dcs4cop__xcube-743 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube/core/store/fs/registry.py:new_fs_data_store"
],
"edited_modules": [
"xcube/core/store/fs/registry.py:new_fs_data_store"
]
},
"file": "xcube/core/store/fs/registry... | dcs4cop/xcube | 4a23a32bd43946ac05360ddbc509b7a92d77b87f | Allow explicit configuration of datasets served by the S3 store
**Is your feature request related to a problem? Please describe.**
Consider a situation where we want a store to serve data from Zarrs from a very large S3 bucket (millions of files, petabytes of data; e.g. Eodata on Creodias). The usual store creation ... | diff --git a/CHANGES.md b/CHANGES.md
index 2e6a6c92..5e35c3a8 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -2,6 +2,17 @@
### Other
+* The xcube filesystem data stores such as "file", "s3", "memory"
+ can now filter the data identifiers reported by `get_data_ids()`. (#585)
+ For this purpose, the data stores now a... |
dcs4cop__xcube-779 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube/core/geom.py:rasterize_features"
],
"edited_modules": [
"xcube/core/geom.py:rasterize_features"
]
},
"file": "xcube/core/geom.py"
}
] | dcs4cop/xcube | a9ea521deb7b572d89c00800182d264665482cd6 | `fill_value` and `dtype` not used correctly in `rasterize_features()`
**Describe the bug**
Function `xcube.core.geom.rasterize_features()` allows specifying how a given feature shall be rasterized as an xarray variable by passing target `fill_value` and `dtype` among other things for each feature.
Currently `f... | diff --git a/CHANGES.md b/CHANGES.md
index a240011c..23cddf6d 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -4,6 +4,13 @@
### Fixes
+* Implementation of function `xcube.core.geom.rasterize_features()`
+ has been changed to account for consistent use of a target variable's
+ `fill_value` and `dtype` for a given fe... |
dcs4cop__xcube-784 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube/util/timeindex.py:_ensure_timestamp_compatible"
],
"edited_modules": [
"xcube/util/timeindex.py:_ensure_timestamp_compatible"
]
},
"file": "xcube/util/timeindex.p... | dcs4cop/xcube | b65f79339efba9bf788c6c579e031c06427a351c | Fix "Can't determine indexer timezone" warning
The following recently appeared in a server log:
```
WARNING: Can't determine indexer timezone; leaving it unmodified.
/home/alicja/miniconda3/envs/xcube/lib/python3.9/site-packages/xarray/core/indexes.py:207: FutureWarning: Indexing a timezone-naive DatetimeIndex wit... | diff --git a/CHANGES.md b/CHANGES.md
index 73d90fc3..968f9f03 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -16,6 +16,9 @@
* xcube CLI tools no longer emit warnings when trying to import
installed packages named `xcube_*` as xcube plugins.
+* The `xcube.util.timeindex` module can now handle 0-dimensional `ndarray... |
dcs4cop__xcube-787 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube/core/geom.py:get_dataset_bounds"
],
"edited_modules": [
"xcube/core/geom.py:get_dataset_bounds"
]
},
"file": "xcube/core/geom.py"
},
{
"changes": {
... | dcs4cop/xcube | 9eb8349c2906424f9da5662fb2aeb9f41c04407e | xcube server cannot handle longitude and latitude as dimension names
**Describe the bug**
A cube with the dimensions `latitude` and `longitude` cannot be visualised via xcube viewer, because the server returns an error:
I would expect xcube server to be able to handle dimensions `longitude` and `latitude` the same ... | diff --git a/CHANGES.md b/CHANGES.md
index 81709690..153bc565 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -23,6 +23,12 @@
`Can't determine indexer timezone; leaving it unmodified.`
which was emitted in such cases.
+### Fixes
+
+* `xcube serve` will now also accept datasets with coordinate names
+ `longitude` a... |
dcs4cop__xcube-861 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube/webapi/timeseries/controllers.py:get_time_series"
],
"edited_modules": [
"xcube/webapi/timeseries/controllers.py:get_time_series"
]
},
"file": "xcube/webapi/times... | dcs4cop/xcube | 2fa54a63631bf1c81e8f45f6fc7b93aab9dab2fe | Time series requests may miss outer values
**Describe the bug**
The xcube server's time series operation `POST /timeseries/{datasetId}/{varName}?startDate={startDate}&endDate={endDate}` may miss outer values of the requested time range if `startDate` or `endDate` are derived from rounded values of the original time ... | diff --git a/CHANGES.md b/CHANGES.md
index e1aa8848..823bc15c 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -1,9 +1,18 @@
## Changes in 1.0.6 (in development)
* Updated [xcube Dataset Specification](docs/source/cubespec.md).
+
* Bundled [xcube-viewer 1.1.0-dev.1](https://github.com/dcs4cop/xcube-viewer/releases/tag... |
dcs4cop__xcube-892 | [
{
"changes": {
"added_entities": [
"xcube/server/api.py:Api.endpoints",
"xcube/server/api.py:ApiHandler.defined_methods",
"xcube/server/api.py:ApiRoute.path_and_methods"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"xcube/se... | dcs4cop/xcube | e20d6bdc658d269766832142610bc544f6cfb3c8 | Unify OGC APIs endpoints under a single prefix
We currently have parts of the modular OGC API exposed at various endpoints:
- STAC under /catalog
- coverages under /catalog (doesn't make sense semantically, but overlaps with STAC)
- compute under / (effectively an implementation of processes under a different n... | diff --git a/CHANGES.md b/CHANGES.md
index ad2e64d2..4d9e72da 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -2,10 +2,14 @@
### Enhancements
-* Added a basic implementation of the draft version of OGC API - Coverages
+* Added a basic implementation of the draft version of OGC API - Coverages.
+* Adapted the STAC impl... |
dcs4cop__xcube-947 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube/core/store/fs/accessor.py:FsAccessor.load_fs"
],
"edited_modules": [
"xcube/core/store/fs/accessor.py:FsAccessor"
]
},
"file": "xcube/core/store/fs/accessor.py"
... | dcs4cop/xcube | 36cb8d49bceffa0547f21de04ac1c5e745b91d26 | Resolve/document dependency discrepancies
conda-forge releases (e.g. [here](https://github.com/conda-forge/xcube-feedstock/pull/48) ) trigger a dependency analysis which always finds a significant number of discrepancies between the dependencies listed in `meta.yaml`. Automated dependency anaylsis isn't 100% reliable, ... | diff --git a/CHANGES.md b/CHANGES.md
index 39684cd1..9225d17e 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -1,5 +1,8 @@
## Changes in 1.4.2 (in development)
+* Update dependencies to better match imports; remove the defaults channel;
+ turn adlfs into a soft dependency. (#945)
+
## Changes in 1.4.1
### Enhanceme... |
dcs4cop__xcube-sh-77 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube_sh/chunkstore.py:SentinelHubChunkStore.__init__",
"xcube_sh/chunkstore.py:SentinelHubChunkStore.get_band_encoding"
],
"edited_modules": [
"xcube_sh/chunkstore.py:Sentin... | dcs4cop/xcube-sh | 67f5600947d6c291f2f51b4d96e28ecd47c0c8ba | Cannot omit band names for "CUSTOM" datasets
Currently, when opening a cube given a `CubeConfig` with `dataset_name="CUSTOM"` and given `collection_id`, then users must also pass `band_names` otherwise an error occurs:
SentinelHubError: 500 Server Error: Internal Server Error for url: https://creodias.sentinel-h... | diff --git a/xcube_sh/chunkstore.py b/xcube_sh/chunkstore.py
index d0f3125..b26c497 100644
--- a/xcube_sh/chunkstore.py
+++ b/xcube_sh/chunkstore.py
@@ -553,12 +553,16 @@ class SentinelHubChunkStore(RemoteStore):
trace_store_calls=False):
self._sentinel_hub = sentinel_hub
if cube_con... |
dcs4cop__xcube-sh-78 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube_sh/chunkstore.py:SentinelHubChunkStore.get_time_ranges",
"xcube_sh/chunkstore.py:SentinelHubChunkStore.get_band_encoding"
],
"edited_modules": [
"xcube_sh/chunkstore.py... | dcs4cop/xcube-sh | 944d5c5ef3c4a217c519f41370805195a1b691c0 | Specify nodata value when generating a cube.
It would be really useful to be able to specify a `nodata` value during the `xcube` generation ( as an argument of `CubeConfig`). This would enable to set the nodata values that are set by the user in BYOC collections. | diff --git a/CHANGES.md b/CHANGES.md
index 66bd980..247c3f6 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -3,10 +3,18 @@
* It is now possible accessing BYOC/BYOD and DEM datasets without
providing the `time_period` cube configuration parameter.
- (#67, #35. #25)
In case such a dataset has no associated time in... |
dcs4cop__xcube-sh-82 | [
{
"changes": {
"added_entities": [
"xcube_sh/sentinelhub.py:SentinelHub._fetch_token"
],
"added_modules": null,
"edited_entities": [
"xcube_sh/sentinelhub.py:SentinelHub.__init__",
"xcube_sh/sentinelhub.py:SentinelHub.datasets",
"xcube_sh/sentinelhub.py:Se... | dcs4cop/xcube-sh | f333382b150b9da3fa74ee4608ce4e3ab1413d99 | Connection broken or TokenExpiredError for certain cube requests
When requesting large cubes via the sh store, it happens, that the connection breaks or the token expires. Therefore the generated cube is not complete and useless.
To reproduce see issue https://github.com/bcdev/service-eurodatacube/issues/132 | diff --git a/CHANGES.md b/CHANGES.md
index 46f9913..4abfdc0 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -1,5 +1,8 @@
## Changes in 0.9.4 (in development)
+* Avoiding `TokenExpiredError` that occurred after
+ requesting tiles from Sentinel Hub after more than 1h. (#49)
+
* Fixed some import statements to be compat... |
dcs4cop__xcube-sh-91 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"xcube_sh/chunkstore.py:SentinelHubChunkStore.get_time_ranges"
],
"edited_modules": [
"xcube_sh/chunkstore.py:SentinelHubChunkStore"
]
},
"file": "xcube_sh/chunkstore.py... | dcs4cop/xcube-sh | 0340708b1ccc3fea18eefbf9e279535cc10e1e19 | Landsat 8 L2 Surface Reflectance seems to have wrong format (int instead of float)
I am using CubeGeneratorRequest to request Landsat 8 Level 2 SR data from sentinelHub. I request multiple SR bands plus the BQA quality band. The BQA band shows the correct integer values, while the SR bands are either 0 or 1. The format... | diff --git a/CHANGES.md b/CHANGES.md
index 3be9a38..a75d85a 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -1,5 +1,10 @@
## Changes in 0.9.6 (in development)
+* Fixed Landsat radiance/reflectance bands to have
+ sample type `FLOAT32` by default, was `UNIT16`. (#89)
+* Avoid having `wavelength: NaN` values in band me... |
ddelange__retrie-8 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/retrie/retrie.py:Checklist.__init__"
],
"edited_modules": [
"src/retrie/retrie.py:Checklist"
]
},
"file": "src/retrie/retrie.py"
},
{
"changes": {
"ad... | ddelange/retrie | 9c76a758f3bc9febae29aa21b5855a4f282c6e15 | Add a list of words
First, this library is really helpful, thank you very much.
Could you please implement an `add` function that receives a list rather than a single word?
E.g. I would like to use it in the following way:
```
from retrie.trie import Trie
trie = Trie()
trie.add(*["abc", "foo", "abs"]) # or tri... | diff --git a/README.md b/README.md
index d2bf0b5..0a6e6db 100644
--- a/README.md
+++ b/README.md
@@ -20,8 +20,7 @@ from retrie.trie import Trie
trie = Trie()
-for term in ["abc", "foo", "abs"]:
- trie.add(term)
+trie.add("abc", "foo", "abs")
assert trie.pattern() == "(?:ab[cs]|foo)" # equivalent to but faster... |
deathbeds__importnb-148 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "src/importnb/__init__.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_mo... | deathbeds/importnb | 605c026018e14bca8af08ee3660160b989de9b32 | add a `--version` switch to the CLI | diff --git a/src/importnb/__init__.py b/src/importnb/__init__.py
index cfd6f3d..54d648d 100644
--- a/src/importnb/__init__.py
+++ b/src/importnb/__init__.py
@@ -27,7 +27,7 @@ def get_ipython(force=True):
import builtins
from ._version import __version__
-from .loader import Notebook, reload
from .entry_points impo... |
deathbeds__wtypes-3 | [
{
"changes": {
"added_entities": [
"wtypes.py:Trait._resolve_defaults",
"wtypes.py:_Object.from_config_file",
"wtypes.py:Dict.__new__",
"wtypes.py:Dict._validate",
"wtypes.py:Dict.__setitem__",
"wtypes.py:Dict.update",
"wtypes.py:DataClass.__setattr_... | deathbeds/wtypes | 8d102bec197a4fab1d993a0d5737cbe94a576788 | Make non default Object annotations required objects. | diff --git a/wtypes.ipynb b/wtypes.ipynb
index afe5a26..242ab26 100644
--- a/wtypes.ipynb
+++ b/wtypes.ipynb
@@ -25,7 +25,7 @@
" https://json-schema.org/\n",
" \"\"\"\n",
" __version__ = \"0.0.1\"\n",
- " import jsonschema, munch, typing, abc, inspect, dataclasses, copy, re\n",
+ " ... |
deathbeds__wtypes-6 | [
{
"changes": {
"added_entities": [
"wtypes.py:_SchemaMeta.example",
"wtypes.py:Link.__enter__",
"wtypes.py:Link.__exit__",
"wtypes.py:Link.link",
"wtypes.py:Link.dlink",
"wtypes.py:Link.observe",
"wtypes.py:Link._propagate",
"wtypes.py:Link._... | deathbeds/wtypes | bb28303748e377de8e2425ad57fbdb0455cd9691 | Observable interface and evented validation. | diff --git a/wtypes.ipynb b/wtypes.ipynb
index 242ab26..ade3721 100644
--- a/wtypes.ipynb
+++ b/wtypes.ipynb
@@ -125,16 +125,24 @@
" cls._type = schema.pop('type', None) or cls._type\n",
" # Combine metadata across the module resolution order.\n",
" cls._merge_annotations... |
debrief__pepys-import-141 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pepys_import/file/nmea_importer.py:NMEAImporter.load_this_file",
"pepys_import/file/nmea_importer.py:NMEAImporter.parse_location"
],
"edited_modules": [
"pepys_import/file/nm... | debrief/pepys-import | 7d8dde9f5615be686cdc61bbcf1872fc9281f917 | Bug in writing to PostGres
It _looks like_ we're trying to write a Typed Quantity to PostGres:
```
'PLATFORM-1' added to Platform!
'PLATFORM-1' added to Platform!
Traceback (most recent call last):
File "/home/ian/git/pepys-import/venv/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1249, in _execut... | diff --git a/pepys_import/file/nmea_importer.py b/pepys_import/file/nmea_importer.py
index 4291bdee..37cf181a 100644
--- a/pepys_import/file/nmea_importer.py
+++ b/pepys_import/file/nmea_importer.py
@@ -126,7 +126,7 @@ class NMEAImporter(Importer):
heading = convert_absolute_angle(self.heading, l... |
debrief__pepys-import-347 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"importers/e_trac_importer.py:ETracImporter._load_this_line"
],
"edited_modules": [
"importers/e_trac_importer.py:ETracImporter"
]
},
"file": "importers/e_trac_importer.... | debrief/pepys-import | 70af5a161f6a092cd17c02a7ffc60b67858470c2 | Bug in storing zero values for fields in various importers
In various importers we have code that looks like this:
```
elevation = convert_distance(elevation_str, unit_registry.metre, None, self.errors, self.error_type)
if elevation:
state.elevation = elevation
```
The `convert_distance` function returns ... | diff --git a/importers/e_trac_importer.py b/importers/e_trac_importer.py
index f13334ff..5cf138c7 100644
--- a/importers/e_trac_importer.py
+++ b/importers/e_trac_importer.py
@@ -115,24 +115,24 @@ class ETracImporter(Importer):
self.name, "location", state.location, "decimal degrees"
)
-... |
debrief__pepys-import-40 | [
{
"changes": {
"added_entities": [
"pepys_import/core/formats/state2.py:State2.set_location",
"pepys_import/core/formats/state2.py:State2.set_location_obj",
"pepys_import/core/formats/state2.py:State2.get_location"
],
"added_modules": null,
"edited_entities": [
... | debrief/pepys-import | 663809b32420b28eb91f3ee22102821fa0e59808 | Minor - use (x,y) location objects
There's currently a bug whereby location is only expressed in degrees.
We should switch to passing self-describing completed `State2` objects around. | diff --git a/docs/usage.rst b/docs/usage.rst
index 625b98fa..d8edb959 100644
--- a/docs/usage.rst
+++ b/docs/usage.rst
@@ -4,4 +4,16 @@ Usage
To use pepys-import in a project::
- import pepys_import
+ from pepys_import.file.file_processor import FileProcessor
+ from pepys_import.file.replay_parser import ... |
decargroup__pykoop-178 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pykoop/kernel_approximation.py:RandomFourierKernelApprox.__init__",
"pykoop/kernel_approximation.py:RandomFourierKernelApprox.fit"
],
"edited_modules": [
"pykoop/kernel_appro... | decargroup/pykoop | 21073ad53ea893e6b42222f6ad0e3444004390f3 | Fix "inverse" Fourier transform in parameters and docs of RFF lifting functions
It should be the Fourier transform not the inverse one. | diff --git a/CITATION.cff b/CITATION.cff
index ee217ef..5ab8fb4 100644
--- a/CITATION.cff
+++ b/CITATION.cff
@@ -10,6 +10,6 @@ authors:
orcid: "https://orcid.org/0000-0002-1987-9268"
affiliation: "McGill University"
title: "decargroup/pykoop"
-version: v1.2.4
+version: v2.0.0
doi: 10.5281/zenodo.5576490
ur... |
decargroup__pykoop-179 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pykoop/koopman_pipeline.py:score_trajectory"
],
"edited_modules": [
"pykoop/koopman_pipeline.py:score_trajectory"
]
},
"file": "pykoop/koopman_pipeline.py"
}
] | decargroup/pykoop | 8c798d69d915524d1186f15f0f2a4bcc1e94543f | `pykoop.score_trajectory()` does not work with `multioutput=raw_values`
```
File "pykoop/koopman_pipeline.py", line 3509, in score_trajectory
if not np.isfinite(score):
ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all()
``` | diff --git a/pykoop/koopman_pipeline.py b/pykoop/koopman_pipeline.py
index 3dafbb4..821c79d 100644
--- a/pykoop/koopman_pipeline.py
+++ b/pykoop/koopman_pipeline.py
@@ -3425,7 +3425,7 @@ def score_trajectory(
else:
score = regression_metric(**regression_metric_args)
# Return error score if score is n... |
dedupeio__dedupe-1062 | [
{
"changes": {
"added_entities": [
"dedupe/api.py:DedupeMatching.__init__"
],
"added_modules": null,
"edited_entities": [
"dedupe/api.py:ActiveMatching.__init__",
"dedupe/api.py:Dedupe.prepare_training",
"dedupe/api.py:Link.prepare_training"
],
... | dedupeio/dedupe | 82435a431395b79c6c7075c84a916ab1c8f70bd3 | Inconsistent alphaNumericPredicate behavior
Hi, I believe `alphaNumericPredicate` implementation is inconsistent.
Example:
```
In [1]: from dedupe.predicates import alpha_numeric
In [2]: alpha_numeric("a_1")
Out[2]: ['a', '1']
In [3]: alpha_numeric("a 1")
Out[3]: ['1']
In [4]: alpha_numeric("a")
Out[4]... | diff --git a/dedupe/api.py b/dedupe/api.py
index 84d6acc..ce71fad 100644
--- a/dedupe/api.py
+++ b/dedupe/api.py
@@ -130,6 +130,9 @@ class DedupeMatching(IntegralMatching):
"""
+ def __init__(self, *args, **kwargs) -> None:
+ super().__init__(*args, **kwargs)
+
def partition(
self, data... |
dedupeio__dedupe-1197 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"dedupe/variables/exists.py:ExistsType"
]
},
"file": "dedupe/variables/exists.py"
}
] | dedupeio/dedupe | 3b4ceaa04f66eb1407fa13803c3822c57a4b0683 | ExistsType subclasses CategoricalType which requires categories
I've tried to use the new syntax for field definitions and encountered a potential bug:
`dedupe.variables.Exists("first_name")`
doesn't work as stated in the Variable-definition.rst
The following error occurs:
> TypeError: CategoricalType.__init__(... | diff --git a/.github/workflows/pythonpackage.yml b/.github/workflows/pythonpackage.yml
index 634a970..ccbdd62 100644
--- a/.github/workflows/pythonpackage.yml
+++ b/.github/workflows/pythonpackage.yml
@@ -50,7 +50,7 @@ jobs:
- name: pytest
run: pytest
- name: Code Coverage
- uses: codecov/codecov-... |
dedupeio__dedupe-837 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"dedupe/predicates.py:CompoundPredicate.__call__"
],
"edited_modules": [
"dedupe/predicates.py:CompoundPredicate"
]
},
"file": "dedupe/predicates.py"
}
] | dedupeio/dedupe | 5092f2598f1f2bcb4f3b1f0ec85f88b95ce7454b | CompoundPredicate should escape `:` to avoid wrong block_keys
I've found an issue on `CompoundPredicate` caused by the lack of escaping `:` chars inside fields.
This causes two problems. First, it can generate duplicate `block_key`s for the same `id`. Here's the example:
```
(SimplePredicate: (commonSetElementPr... | diff --git a/dedupe/predicates.py b/dedupe/predicates.py
index 1934811..e796a6d 100644
--- a/dedupe/predicates.py
+++ b/dedupe/predicates.py
@@ -329,9 +329,14 @@ class CompoundPredicate(tuple):
def __call__(self, record, **kwargs):
predicate_keys = [predicate(record, **kwargs)
f... |
deepchem__deepchem-2802 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"deepchem/data/datasets.py:DiskDataset.set_shard"
],
"edited_modules": [
"deepchem/data/datasets.py:DiskDataset"
]
},
"file": "deepchem/data/datasets.py"
}
] | deepchem/deepchem | 9ef6c58eefd4e5f9bee40743ca14defa6f764f80 | Bug in dataset.get_shape() when used after dataset.set_shard()
## 🐛 Bug
## To Reproduce
<!-- If you have a code sample, error messages, stack traces, please provide it here as well. -->
## Expected behavior
```
import deepchem as dc
import numpy as np
X = np.random.randn(10, 3)
y = np.random.randn(10)
... | diff --git a/deepchem/data/datasets.py b/deepchem/data/datasets.py
index f80a399ca..dd5ba637f 100644
--- a/deepchem/data/datasets.py
+++ b/deepchem/data/datasets.py
@@ -2286,6 +2286,7 @@ class DiskDataset(Dataset):
basename = "shard-%d" % shard_num
DiskDataset.write_data_to_disk(self.data_dir, basename, X, y,... |
deepchem__deepchem-2979 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"deepchem/feat/graph_data.py:GraphData.__init__"
],
"edited_modules": [
"deepchem/feat/graph_data.py:GraphData"
]
},
"file": "deepchem/feat/graph_data.py"
}
] | deepchem/deepchem | ba780d3d21013b2924fd3301913ff530939a2ccb | GraphData class not working for single atom mols
## 🐛 Bug
`GraphData` class checks if the `edge_index` contains the invalid node number, using the condition `np.max(edge_index) >= len(node_features)`. In case of single atom mols, `edge_index` in an empty array of `shape = (2, 0)` and np.max() method raises error fo... | diff --git a/deepchem/feat/graph_data.py b/deepchem/feat/graph_data.py
index b9d037e95..000b4d750 100644
--- a/deepchem/feat/graph_data.py
+++ b/deepchem/feat/graph_data.py
@@ -69,7 +69,9 @@ class GraphData:
raise ValueError('edge_index.dtype must contains integers.')
elif edge_index.shape[0] != 2:
r... |
deepchem__deepchem-3165 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"deepchem/data/datasets.py:NumpyDataset.merge"
],
"edited_modules": [
"deepchem/data/datasets.py:NumpyDataset"
]
},
"file": "deepchem/data/datasets.py"
},
{
"cha... | deepchem/deepchem | 0fb7c4a889f0ad3238abdde10237ad8e0d616460 | Updating deepchem to follow 4 spaces for indentation
Context: DeepChem codebase currently uses 2 spaces for indents.
Proposal: Migrate to 4 spaces for indents.
Here is a breakdown of PRs to update indentation.
- [x] The first pull request should update setup.cfg to use indent_width as 4 for yapf.
Updating cor... | diff --git a/deepchem/data/datasets.py b/deepchem/data/datasets.py
index 02c9b5269..e76e4eea8 100644
--- a/deepchem/data/datasets.py
+++ b/deepchem/data/datasets.py
@@ -1090,6 +1090,8 @@ class NumpyDataset(Dataset):
axis=0,
)
+ if y.ndim == 1:
+ y = y.reshape(-1, 1)
return NumpyDataset(... |
deepchem__deepchem-3520 | [
{
"changes": {
"added_entities": [
"deepchem/models/torch_models/layers.py:MXMNetGlobalMessagePassing.__init__",
"deepchem/models/torch_models/layers.py:MXMNetGlobalMessagePassing.forward",
"deepchem/models/torch_models/layers.py:MXMNetGlobalMessagePassing.message",
"deepch... | deepchem/deepchem | 7cc7e91931333f86e832108ce1d094c89be88506 | Scaffold splitting of BBBP dataset
Scaffolding splitting of BBBP dataset throws a ValueError.
Steps to reproduct:
```py
import deepchem as dc
tasks, dataset, transformer = dc.molnet.load_bbbp(featurizer=dc.feat.DummyFeaturizer(),
splitter=dc.splits.ScaffoldSplitter()... | diff --git a/deepchem/models/torch_models/layers.py b/deepchem/models/torch_models/layers.py
index 74aa2320a..f8524e990 100644
--- a/deepchem/models/torch_models/layers.py
+++ b/deepchem/models/torch_models/layers.py
@@ -1,4 +1,5 @@
import math
+from math import pi as PI
import numpy as np
from typing import Any, Tu... |
deepset-ai__haystack-7038 | [
{
"changes": {
"added_entities": [
"haystack/components/evaluators/statistical_evaluator.py:StatisticalEvaluator._recall_single_hit",
"haystack/components/evaluators/statistical_evaluator.py:StatisticalEvaluator._recall_multi_hit"
],
"added_modules": null,
"edited_entitie... | deepset-ai/haystack | 5910b4adc9b2688155abb8d2290e5cf56833eb0b | Implement function to calculate Recall metric
As specified in proposal #5794 we need to implement a function to calculate the Recall metric.
Ideally the function should be part of the private interface and called only through the `calculate_metrics` function (see #6063). `_calculate_recall()` could be a nice name.
... | diff --git a/haystack/components/evaluators/statistical_evaluator.py b/haystack/components/evaluators/statistical_evaluator.py
index 6f65fc10..a6c00964 100644
--- a/haystack/components/evaluators/statistical_evaluator.py
+++ b/haystack/components/evaluators/statistical_evaluator.py
@@ -1,4 +1,5 @@
import collections
+... |
deepset-ai__haystack-7536 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"haystack/components/evaluators/answer_exact_match.py:AnswerExactMatchEvaluator.run"
],
"edited_modules": [
"haystack/components/evaluators/answer_exact_match.py:AnswerExactMatchEvalu... | deepset-ai/haystack | 6a8834e43e850cfb74ea0ff120a30bd8675dc493 | feat: `AnswerExactMatchEvaluator` input should be one answer per query instead of list of answers
We should change the inputs of the `AnswerExactMatchEvaluator` added in https://github.com/deepset-ai/haystack/pull/7050 from
`questions: List[str], ground_truth_answers: List[List[str]], predicted_answers: List[List[str]... | diff --git a/.github/CODEOWNERS b/.github/CODEOWNERS
index 1657c912..c559d08f 100644
--- a/.github/CODEOWNERS
+++ b/.github/CODEOWNERS
@@ -4,8 +4,8 @@
# in the repo. Unless a later match takes precedence,
# @deepset-ai/core-engineering will be requested for review
# when someone opens a pull request.
-* ... |
deepset-ai__haystack-7621 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"haystack/components/evaluators/context_relevance.py:ContextRelevanceEvaluator"
]
},
"file": "haystack/components/evaluators/context_relevance.py"
},
{
... | deepset-ai/haystack | 8cb3cecf3408b96e718b9e2f00d13697997a1b75 | SASEvaluator output scores are list of ndarray for bi-encoders but should be list of float
**Describe the bug**
Individual scores returned by SASEvaluator are lists of ndarray but should be just lists of float. Currently the output with model `sentence-transformers/all-mpnet-base-v2` is:
`{'individual_scores': [[[1.]... | diff --git a/haystack/components/evaluators/context_relevance.py b/haystack/components/evaluators/context_relevance.py
index d78ccfc7..6402ef3b 100644
--- a/haystack/components/evaluators/context_relevance.py
+++ b/haystack/components/evaluators/context_relevance.py
@@ -113,7 +113,7 @@ class ContextRelevanceEvaluator(L... |
delfick__python-dict2xml-27 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"dict2xml/__init__.py:dict2xml"
],
"edited_modules": [
"dict2xml/__init__.py:dict2xml"
]
},
"file": "dict2xml/__init__.py"
}
] | delfick/python-dict2xml | e7823cf44431392b786bc1a91748fb1d1a1b9883 | DataSorter is not working
As it was mentioned in #25, if I don't want to sort my data i should use data_sorter this way:
I guess i do the same:
![image](https://github.com/user-attachments/assets/3908b34d-8206-42dc-9358-5... | diff --git a/README.rst b/README.rst
index 0d52dc6..1060d25 100644
--- a/README.rst
+++ b/README.rst
@@ -137,6 +137,10 @@ Limitations
Changelog
---------
+1.7.6 - TBD
+ * Fixed the ``dict2xml.dict2xml`` entry point to distribute options
+ correctly
+
1.7.5 - 13 February 2024
* Introduced the ``data_so... |
delph-in__pydelphin-162 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"delphin/mrs/compare.py:_make_digraph",
"delphin/mrs/compare.py:_isomorphic_var_signature"
],
"edited_modules": [
"delphin/mrs/compare.py:_make_digraph",
"delphin/mrs/... | delph-in/pydelphin | 83108aee8c1db2b4293f118616301d092a33f4df | Predicate terminology is outdated
PyDelphin still refers to "string" and "grammar" predicates, where these should be "surface" and "abstract" ("string" is compared to "type", not "grammar"/"abstract"). | diff --git a/CHANGELOG.md b/CHANGELOG.md
index c622845..d728f60 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -31,6 +31,14 @@
* Converting to PENMAN via the `convert` command should no longer crash for
disconnected graphs, but print a log message to stderr, print a blank line
to stdout, and then continue (#161... |
delph-in__pydelphin-359 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "delphin/cli/convert.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modu... | delph-in/pydelphin | b5c7094691f01a161983224fe78b2ad26e7fea9b | format function for TypeDefinition seems to mess up some of the Lists
If I `iterparse` this TypeDefinition
```
main-vprn := basic-main-verb & norm-pronominal-verb &
[ SYNSEM.LOCAL.CAT.VAL [ SUBJ < #subj >,
COMPS < #comps >,
CLTS #clt ],
ARG-ST < #subj... | diff --git a/.github/workflows/checks.yml b/.github/workflows/checks.yml
index 2a5298f..0ef3a60 100644
--- a/.github/workflows/checks.yml
+++ b/.github/workflows/checks.yml
@@ -37,4 +37,4 @@ jobs:
pytest .
- name: Type-check with mypy
run: |
- mypy delphin --namespace-packages --explicit-pac... |
demosense__demorepo-39 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/demorepo/commands/command_run.py:_run_targets",
"src/demorepo/commands/command_run.py:stage",
"src/demorepo/commands/command_run.py:run"
],
"edited_modules": [
"s... | demosense/demorepo | c5e8e938224a7cf1cdffe51bf8755cd4f103dd3d | Stop stage/command when errors happen
Some stages should be able to define a short circuit strategy when a particular script fails.
Use Case: Specifically in deploy scripts with dependences, the script should stop to avoid resources being deployed when their dependencies failed. | diff --git a/README.md b/README.md
index c479d90..750f7a8 100644
--- a/README.md
+++ b/README.md
@@ -59,7 +59,7 @@ python3 -m demorepo [command] [options]
### run
```
-demorepo run [-h] [-t TARGETS] [-e ENV] [--reverse-targets] command
+demorepo run [-h] [-t TARGETS] [-e ENV] [--reverse-targets] [--stop-on-error] c... |
demosense__demorepo-40 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/demorepo/commands/command_run.py:run"
],
"edited_modules": [
"src/demorepo/commands/command_run.py:run"
]
},
"file": "src/demorepo/commands/command_run.py"
},
{... | demosense/demorepo | 6dcff3ceada6957d9e14e646bde040c32ac8ac0f | Reimplement recursive-deps | diff --git a/src/demorepo/commands/command_run.py b/src/demorepo/commands/command_run.py
index 504024f..2e725b5 100644
--- a/src/demorepo/commands/command_run.py
+++ b/src/demorepo/commands/command_run.py
@@ -171,6 +171,7 @@ def run(args):
command = args['command']
targets = args.get('targets', None)
rev... |
dephell__dephell_specifier-8 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "dephell_specifier/constants.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"dephe... | dephell/dephell_specifier | 9153083a7463b7390c3efb09713e65a909e08cd7 | Retrieving input out of Specifier('==1.0-1')
`str(Specifier('==1.0-1'))` is `==1.0-1` however
`str(Specifier('==1.0-1').version)` is `1.0.post1`
To get `1.0-1` back out, I need to do `str(Specifier('==1.0-1')._spec.version)`
`1.0-1` is `1.0.post1` in equivalent in recent versions of Python libraries, but does... | diff --git a/dephell_specifier/constants.py b/dephell_specifier/constants.py
index 6895c4b..7060a13 100644
--- a/dephell_specifier/constants.py
+++ b/dephell_specifier/constants.py
@@ -13,4 +13,4 @@ PYTHONS_POPULAR = ('3.5', '3.6', '3.7')
PYTHONS_UNRELEASED = ('3.8', '4.0')
PYTHONS = PYTHONS_POPULAR + PYTHONS_DEPRECA... |
deppen8__pandas-vet-127 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/pandas_vet/__init__.py:check_inplace_false"
],
"edited_modules": [
"src/pandas_vet/__init__.py:check_inplace_false"
]
},
"file": "src/pandas_vet/__init__.py"
}
] | deppen8/pandas-vet | b45e2283b2d880f88401992424c59682d0e4c380 | inplace set to a variable raises exception
**Describe the bug**
raised exception
**To Reproduce**
Steps to reproduce the behavior:
Have the following code in a file
```python
def some_function(dataFrame, in_place=False):
return dataFrame.drop([], inplace=in_place)
```
**Expected behavior**
Allow `... | diff --git a/src/pandas_vet/__init__.py b/src/pandas_vet/__init__.py
index 9060511..2a4f0e0 100644
--- a/src/pandas_vet/__init__.py
+++ b/src/pandas_vet/__init__.py
@@ -173,7 +173,11 @@ def check_inplace_false(node: ast.Call) -> List:
"""
errors = []
for kw in node.keywords:
- if kw.arg == "inplac... |
deppen8__pandas-vet-42 | [
{
"changes": {
"added_entities": [
"pandas_vet/__init__.py:check_for_arithmetic_methods",
"pandas_vet/__init__.py:check_for_comparison_methods"
],
"added_modules": [
"pandas_vet/__init__.py:check_for_arithmetic_methods",
"pandas_vet/__init__.py:check_for_compari... | deppen8/pandas-vet | 128232a43e8dd2819e77da5a03f494691e494da1 | Arithmetic and comparison operators
We should implement checks for all of the text-based arithmetic and comparison operators. If found, recommend using the operator itself. Something like:
> Use <operator> instead of <text method>
| use | check for |
| --- | ---------- |
| `+` | `.add` |
| `-` | `.sub` and `.s... | diff --git a/pandas_vet/__init__.py b/pandas_vet/__init__.py
index 8c286e0..b675fd8 100644
--- a/pandas_vet/__init__.py
+++ b/pandas_vet/__init__.py
@@ -14,6 +14,9 @@ class Visitor(ast.NodeVisitor):
ast.NodeVisitor will automatically call the appropriate method for a given node type
i.e. calling self.visit ... |
deschler__django-modeltranslation-662 | [
{
"changes": {
"added_entities": [
"modeltranslation/admin.py:TranslationBaseModelAdmin._get_widget_from_field"
],
"added_modules": null,
"edited_entities": [
"modeltranslation/admin.py:TranslationBaseModelAdmin.patch_translation_field"
],
"edited_modules": [
... | deschler/django-modeltranslation | 5ab3a45af6262c599f4108de938a93028f9377dd | TabbedUI not working for ForeignKeys
Hi,
is there a reason, why the tabbed UI does not work for foreign key fields?
If it's a bug and someone hints me in the right direction, I might be able to fix i... | diff --git a/modeltranslation/admin.py b/modeltranslation/admin.py
index e610216..4430ee6 100644
--- a/modeltranslation/admin.py
+++ b/modeltranslation/admin.py
@@ -94,7 +94,7 @@ class TranslationBaseModelAdmin(BaseModelAdmin):
db_field.empty_value == 'both' or orig_field.name in self.both_empty_values... |
deschler__django-modeltranslation-671 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"modeltranslation/manager.py:MultilingualQuerySet.raw_values",
"modeltranslation/manager.py:MultilingualQuerySet.values",
"modeltranslation/manager.py:MultilingualQuerySet.values_list"
... | deschler/django-modeltranslation | 943e90226c69a96b33e8f80554a905f5c03d19cd | Error "'Cast' object has no attribute 'split'" when using Cast in values_list()
We're using wagtail with [wagtail-modeltranslation](https://github.com/infoportugal/wagtail-modeltranslation), which uses [django-modeltranslation](https://github.com/deschler/django-modeltranslation), and we've stumbled over this error:
... | diff --git a/modeltranslation/manager.py b/modeltranslation/manager.py
index a17a815..064a66b 100644
--- a/modeltranslation/manager.py
+++ b/modeltranslation/manager.py
@@ -406,8 +406,8 @@ class MultilingualQuerySet(QuerySet):
return super(MultilingualQuerySet, self).only(*fields)
# This method was not ... |
deshima-dev__decode-12 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "decode/__init__.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules"... | deshima-dev/decode | d3a6683570dbe85fbe81a03f7f59379ec8df38f8 | Release v0.5.7
- Update version numbers written in:
- pyproject.toml
- decode/__init__.py
- docs/conf.py
- tests/test_metadata.py | diff --git a/decode/__init__.py b/decode/__init__.py
index b530747..6147cd5 100644
--- a/decode/__init__.py
+++ b/decode/__init__.py
@@ -1,5 +1,5 @@
# flake8: noqa
-__version__ = "0.5.6"
+__version__ = "0.5.7"
__author__ = "DESHIMA software team"
diff --git a/docs/conf.py b/docs/conf.py
index de2291b..8663081 100... |
deshima-dev__decode-14 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "decode/__init__.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules"... | deshima-dev/decode | 8b70f186b2c01c01fd48174753ea1b55a6e43248 | Release v0.5.8
- Update Python requirements (>=3.6.1 → >= 3.6)
- Also update poetry.lock
- Update version numbers (0.5.7 → 0.5.8) written in:
- pyproject.toml
- decode/__init__.py
- docs/conf.py
- tests/test_metadata.py | diff --git a/decode/__init__.py b/decode/__init__.py
index 6147cd5..49c96c0 100644
--- a/decode/__init__.py
+++ b/decode/__init__.py
@@ -1,5 +1,5 @@
# flake8: noqa
-__version__ = "0.5.7"
+__version__ = "0.5.8"
__author__ = "DESHIMA software team"
diff --git a/docs/conf.py b/docs/conf.py
index 8663081..f771c05 100... |
deshima-dev__decode-16 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "decode/__init__.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules"... | deshima-dev/decode | 21c0888b2f7fa84eef7f8b30b5a553fc83a6867d | Release v0.5.9
- Fix wrong version of pyyaml (`^3.13` → `^5.3`) in `pyproject.toml`
- Also update `poetry.lock`
- Update version numbers (0.5.7 → 0.5.8) written in:
- `pyproject.toml`
- `decode/__init__.py`
- `docs/conf.py`
- `tests/test_metadata.py` | diff --git a/decode/__init__.py b/decode/__init__.py
index 49c96c0..4172dd8 100644
--- a/decode/__init__.py
+++ b/decode/__init__.py
@@ -1,5 +1,5 @@
# flake8: noqa
-__version__ = "0.5.8"
+__version__ = "0.5.9"
__author__ = "DESHIMA software team"
diff --git a/docs/conf.py b/docs/conf.py
index f771c05..ae26901 100... |
deshima-dev__decode-205 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "decode/__init__.py"
},
{
"changes": {
"added_entities": [
"decode/utils.py:phaseof"
],
"added_modules": [
"decode/ut... | deshima-dev/decode | 409f4df5f669b57e63f4665f3335765846c69215 | Add utility to get phase label of 1D DataArray | diff --git a/CITATION.cff b/CITATION.cff
index b1d2ddd..86816f7 100644
--- a/CITATION.cff
+++ b/CITATION.cff
@@ -3,8 +3,8 @@ message: "If you use this software, please cite it as below."
title: "de:code"
abstract: "DESHIMA code for data analysis"
-version: 2024.8.3
-date-released: 2024-08-10
+version: 2024.8.4
+dat... |
deshima-dev__deshima-sensitivity-81 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "deshima_sensitivity/__init__.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"ed... | deshima-dev/deshima-sensitivity | 3d949dc6afd0d88474ec97da2036e6095f00bc90 | Release v0.4.1 | diff --git a/.devcontainer/Dockerfile b/.devcontainer/Dockerfile
index 143c0f4..595477a 100644
--- a/.devcontainer/Dockerfile
+++ b/.devcontainer/Dockerfile
@@ -1,4 +1,4 @@
-FROM python:3.9-slim
+FROM python:3.10-slim
ENV POETRY_VIRTUALENVS_CREATE=false
diff --git a/.devcontainer/devcontainer.json b/.devcontainer/... |
deshima-dev__deshima-sensitivity-96 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "deshima_sensitivity/__init__.py"
}
] | deshima-dev/deshima-sensitivity | 5e5a2f61221cbb8b60c27bf46ed843d33a60f743 | Fix project dependencies | diff --git a/CITATION.cff b/CITATION.cff
index fd0a812..f2e3ba9 100644
--- a/CITATION.cff
+++ b/CITATION.cff
@@ -3,7 +3,7 @@ message: "If you use this software, please cite it as below."
title: "deshima-sensitivity"
abstract: "Sensitivity calculator for DESHIMA-type spectrometers"
-version: 0.3.1
+version: 0.3.2
d... |
desihub__desitransfer-35 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"py/desitransfer/daemon.py:TransferDaemon.backup"
],
"edited_modules": [
"py/desitransfer/daemon.py:TransferDaemon"
]
},
"file": "py/desitransfer/daemon.py"
}
] | desihub/desitransfer | ebb918221d97914d4e749ce6eff8806656756423 | Transfer 'NightSummary' in night logs from KPNO to NERSC
With the rsynch of nightlogs/, also transfer all files that include the string 'NightSummary' from KPNO to NERSC. They do not have a '_kpno' tag, but they are only written at KPNO. | diff --git a/bin/desi_tucson_transfer.sh b/bin/desi_tucson_transfer.sh
index c93e0a8..7f4e01a 100755
--- a/bin/desi_tucson_transfer.sh
+++ b/bin/desi_tucson_transfer.sh
@@ -31,7 +31,7 @@ set -o noglob
#
# Static data sets don't need to be updated as frequently.
#
-static='protodesi public/epo spectro/redux/andes spe... |
desihub__desitransfer-39 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"py/desitransfer/daemon.py:TransferDaemon.checksum",
"py/desitransfer/daemon.py:verify_checksum"
],
"edited_modules": [
"py/desitransfer/daemon.py:TransferDaemon",
"py... | desihub/desitransfer | 1e2627d6b9b7e9681b9470ef682fb428b452c6fd | Add information on type of checksum failure
When a checksum failure is detected, add log information about the type of failure: invalid checksum or missing/extraneous file. | diff --git a/bin/desi_tucson_transfer.sh b/bin/desi_tucson_transfer.sh
index 1dfcb3e..7db65cb 100755
--- a/bin/desi_tucson_transfer.sh
+++ b/bin/desi_tucson_transfer.sh
@@ -35,7 +35,7 @@ static='protodesi public/epo spectro/redux/andes spectro/redux/blanc spectro/red
#
# Dynamic data sets may change daily.
#
-dynami... |
desihub__desiutil-173 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"py/desiutil/modules.py:configure_module"
],
"edited_modules": [
"py/desiutil/modules.py:configure_module"
]
},
"file": "py/desiutil/modules.py"
}
] | desihub/desiutil | 93f40ac22f0d5629bb80713e11918e1d1cd3f36b | desiInstall creates incorrect module file for QuasarNP
QuasarNP is a semi-external package hosted in desihub. It doesn't have a boilerplate etc/quasarnp.module file, but it also doesn't require anything custom so I was expecting the desiInstall default module file to work. desiInstall does correctly identify the "py"... | diff --git a/doc/changes.rst b/doc/changes.rst
index ef3bf1d..0fc8189 100644
--- a/doc/changes.rst
+++ b/doc/changes.rst
@@ -5,7 +5,10 @@ Change Log
3.2.2 (unreleased)
------------------
-* No changes yet.
+* Add module config support for packages like QuasarNP where the GitHub
+ name is capitalized by the python ... |
desihub__desiutil-185 | [
{
"changes": {
"added_entities": [
"py/desiutil/install.py:DesiInstall.unlock_permissions"
],
"added_modules": null,
"edited_entities": [
"py/desiutil/install.py:DesiInstall.set_install_dir",
"py/desiutil/install.py:DesiInstall.install"
],
"edited_modu... | desihub/desiutil | 8d5bbda3e42181fe4f5233b534b2e6b4abb1e52e | Disable warnings about Python scripts not in PATH.
During a recent run of `pip install` there was a new warning message:
```
WARNING: The scripts fits2bitmap, fitscheck, fitsdiff, fitsheader, fitsinfo, samp_hub, showtable, volint and wcslint are installed in '/global/common/software/desi/users/bweaver/cori/desicond... | diff --git a/.github/workflows/python-package.yml b/.github/workflows/python-package.yml
index 5463342..b17e805 100644
--- a/.github/workflows/python-package.yml
+++ b/.github/workflows/python-package.yml
@@ -17,9 +17,9 @@ jobs:
fail-fast: true
matrix:
os: [ubuntu-latest]
- ... |
desihub__desiutil-188 | [
{
"changes": {
"added_entities": [
"py/desiutil/install.py:DesiInstall.compile_branch"
],
"added_modules": null,
"edited_entities": [
"py/desiutil/install.py:DesiInstall.run"
],
"edited_modules": [
"py/desiutil/install.py:DesiInstall"
]
},
... | desihub/desiutil | 4f910f407c4b7fa9636aa64fc65acd72c49a3cf7 | desiInstall of specex/main and fiberassign/main, which need compilation too
desiInstall supports "in-place" installations of python repos that adds `$PRODUCT_DIR/py` to `$PYTHONPATH` and `$PRODUCT_DIR/bin` to `$PATH` so that any changes to the repo are automatically available without having to do a separate installatio... | diff --git a/doc/changes.rst b/doc/changes.rst
index 8697970..93581d9 100644
--- a/doc/changes.rst
+++ b/doc/changes.rst
@@ -8,9 +8,14 @@ Change Log
* :command:`desiInstall` uses desihub location of simqso fork (commit e963344_).
* Allow :command:`desiInstall` to remove permission-locked directories;
suppress cert... |
desihub__desiutil-195 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"py/desiutil/iers.py:freeze_iers"
],
"edited_modules": [
"py/desiutil/iers.py:freeze_iers"
]
},
"file": "py/desiutil/iers.py"
},
{
"changes": {
"added_enti... | desihub/desiutil | a15f4f98214d14ad05e740d68f333994dfa1f1f8 | Allow desiInstall to install packages with world-read
Currently `desiInstall` removes world-read permissions when installing DESI packages. Since, in principle, we want all NERSC users to have access to the DESI software stack to work with public data, we need to default to installing world-read permission, with the n... | diff --git a/.gitignore b/.gitignore
index d73e8fc..af39064 100644
--- a/.gitignore
+++ b/.gitignore
@@ -33,6 +33,8 @@ MANIFEST
# Other
.*.swp
*~
+.vscode
+.env
# Mac OSX
.DS_Store
diff --git a/doc/desiInstall.rst b/doc/desiInstall.rst
index 8c926f0..c1b28b7 100644
--- a/doc/desiInstall.rst
+++ b/doc/desiInstall... |
desihub__desiutil-93 | [
{
"changes": {
"added_entities": [
"py/desiutil/log.py:_configure_root_logger"
],
"added_modules": [
"py/desiutil/log.py:_configure_root_logger"
],
"edited_entities": [
"py/desiutil/log.py:get_logger"
],
"edited_modules": [
"py/desiutil/l... | desihub/desiutil | 229031acffe2b18186e4928a8a9832131849dc6d | Questions/suggestions for logging module
I have some questions/suggestions about `log.get_logger()` after adapting `desisurvey` and `surveysim` to use it.
Environment variables usually set a default that can be overridden via the API, but `$DESI_LOGLEVEL` overrides the API `level` parameter. I found this confusing ... | diff --git a/doc/changes.rst b/doc/changes.rst
index 362be2b..6cb18fc 100644
--- a/doc/changes.rst
+++ b/doc/changes.rst
@@ -7,9 +7,13 @@ Change Log
* Enhance :mod:`desiutil.log` with a context manager (PR `#92`_), and
change the way the log level is set.
+* Avoid logging interference with :func:`desiutil.log.get... |
destag__at-date-15 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "atdate/atdate_format.py"
}
] | destag/at-date | dc4d4b9dc25ad7b4039bfd4b9dea771df23ee282 | Add rule to parser to omit word 'now'
Parser now require string in format like `now next month`.
It would be good if word `now` would be optional and strings like `next month` would be parsed like one above.
This change requires adding rule to parser string and probably adding additional methods to **api.py**. | diff --git a/atdate/atdate_format.py b/atdate/atdate_format.py
index 6749166..42e910b 100644
--- a/atdate/atdate_format.py
+++ b/atdate/atdate_format.py
@@ -7,6 +7,7 @@ format_string = r'''
| date increment
| nowspec
| nowspec increment
+ | increment
time: HR24CLOCK_HR_MIN ... |
destag__at-date-17 | [
{
"changes": {
"added_entities": [
"atdate/api.py:AtDateTransformer._iso_time",
"atdate/api.py:AtDateTransformer._iso_date"
],
"added_modules": null,
"edited_entities": [
"atdate/api.py:AtDateParser.execute",
"atdate/api.py:AtDateTransformer._hr24clock_hou... | destag/at-date | 3957d0b750ef1205adb0ba2fc3dccf34c3f0ce62 | ISO 8601 compatibility
I think that it would be nice to support dates and times in ISO 8601 format. | diff --git a/atdate/api.py b/atdate/api.py
index b42b2ac..7f1af8e 100644
--- a/atdate/api.py
+++ b/atdate/api.py
@@ -15,7 +15,9 @@ class AtDateParser:
tree = self.parser.parse(string_to_parse.lower())
new_tree = transformer.transform(tree)
- next_time_run = new_tree if isinstance(new_tree, da... |
dev-cafe__parselglossy-52 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"parselglossy/documentation.py:documentation_generator",
"parselglossy/documentation.py:document_keyword",
"parselglossy/documentation.py:rec_documentation_generator"
],
"edit... | dev-cafe/parselglossy | b28084a6ca692dd1cecc2e07a229f20d1630e162 | Repeated keywords in the autogenerated documentation
* parselglossy version: b28084a
* Python version: 3.7.0
* Operating System: Ubuntu-18.10
### What I Did
The following `template.yml`
```
keywords:
- name: foo
type: int
docstring: foo
- name: bar
type: int
docstring: bar
- name: ... | diff --git a/parselglossy/documentation.py b/parselglossy/documentation.py
index f101cb7..0b8ed79 100644
--- a/parselglossy/documentation.py
+++ b/parselglossy/documentation.py
@@ -51,14 +51,19 @@ def documentation_generator(
"""
comment = (
+ ".. raw:: html\n\n"
+ " <style> .red {color:#aa... |
dev-cafe__parselglossy-99 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"parselglossy/api.py:generate",
"parselglossy/api.py:document"
],
"edited_modules": [
"parselglossy/api.py:generate",
"parselglossy/api.py:document"
]
},
... | dev-cafe/parselglossy | 727d40f300f696fd4cbe54dc9fc91188fe2638ec | Chain of dependencies
### Description
The following chain of dependencies currently does not work if neither `bar` nor `baz` is set:
```
keywords:
- name: foo
type: float
docs... | diff --git a/parselglossy/api.py b/parselglossy/api.py
index 99ea3d4..ae507bf 100644
--- a/parselglossy/api.py
+++ b/parselglossy/api.py
@@ -174,7 +174,7 @@ def generate(
stencil = read_yaml_file(template_)
# Check if the template is valid
- is_template_valid(stencil)
+ stencil = is_template_valid(ste... |
devanshshukla99__pytest-remote-response-28 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "docs/conf.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null... | devanshshukla99/pytest-remote-response | c724ec73a4bddca226c22e2aae33bed593200b99 | Fix database
Probably better to move to a thread safe dB, just to be safe.
Work towards reducing the footprint.
| diff --git a/docs/conf.py b/docs/conf.py
index 484ca87..ab1554b 100644
--- a/docs/conf.py
+++ b/docs/conf.py
@@ -260,5 +260,5 @@ intersphinx_mapping = {
"urllib3": ("https://urllib3.readthedocs.io/en/stable/", None),
"requests": ("https://docs.python-requests.org/en/master/", None),
"aiohttp": ("https://... |
developmentseed__cogeo-mosaic-228 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"cogeo_mosaic/backends/base.py:BaseBackend.get_assets"
],
"edited_modules": [
"cogeo_mosaic/backends/base.py:BaseBackend"
]
},
"file": "cogeo_mosaic/backends/base.py"
... | developmentseed/cogeo-mosaic | 2e12ff197f3c64bd3ba36c99ce2f27597342881a | add`asset_prefix` to assets
### Discussed in https://github.com/developmentseed/cogeo-mosaic/discussions/226
<div type='discussions-op-text'>
<sup>Originally posted by **scottyhq** December 6, 2023</sup>
I tired rendering the 0.0.3 example which uses public data:
https://titiler.xyz/mosaicjson/map?url=https://... | diff --git a/CHANGES.md b/CHANGES.md
index 12763d0..1ec014f 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -1,3 +1,6 @@
+## 7.1.0
+
+* Automatically remove/add `asset_prefix` in Mosaic Backends
## 7.0.1 (2023-10-17)
diff --git a/cogeo_mosaic/backends/base.py b/cogeo_mosaic/backends/base.py
index 4fe4f64..7cb8a91 1006... |
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