instance_id stringlengths 10 57 | file_changes listlengths 1 15 | repo stringlengths 7 53 | base_commit stringlengths 40 40 | problem_statement stringlengths 11 52.5k | patch stringlengths 251 7.06M |
|---|---|---|---|---|---|
idaholab__MontePy-487 | [
{
"changes": {
"added_entities": [
"montepy/data_inputs/isotope.py:Isotope._handle_stupid_legacy_stupidity"
],
"added_modules": null,
"edited_entities": [
"montepy/data_inputs/isotope.py:Isotope.__init__",
"montepy/data_inputs/isotope.py:Isotope.nuclide_str",
... | idaholab/MontePy | a280fb35338e26f4d3a867c0b12a013d1e8e194b | Metastable isotopes are printed as regular isotopes
**Describe the bug**
MontePy knows what metastable isotopes are (#111, #257). Their string representations (#473, #474) do not currently show the metastable state.
**To Reproduce**
A short code snippet of what you have ran. Please change or remove any speci... | diff --git a/doc/source/changelog.rst b/doc/source/changelog.rst
index 8d6b03a2..14d8a0bf 100644
--- a/doc/source/changelog.rst
+++ b/doc/source/changelog.rst
@@ -1,6 +1,13 @@
MontePy Changelog
=================
+#Next Version#
+--------------
+
+**Bug Fixes**
+
+* Fixed bug that didn't show metastable states for p... |
idaholab__MontePy-488 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"montepy/materials.py:Materials"
]
},
"file": "montepy/materials.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
... | idaholab/MontePy | 4749e95102c838296482b3fd6e237d064ad35972 | Materials Are Not Updated In New Input File
**Describe the bug**
When materials are added to or modified within an input file, the material cards are not updated. Old materials are still written, and new materials are not written. However, the cell is updated correctly.
**To Reproduce**
A short code snippet of... | diff --git a/doc/source/changelog.rst b/doc/source/changelog.rst
index ea0401a7..d3291f87 100644
--- a/doc/source/changelog.rst
+++ b/doc/source/changelog.rst
@@ -6,6 +6,7 @@ MontePy Changelog
**Features Added**
* Write problems to either file paths or streams (file handles) with MCNP_Problem.write_problem() (:issu... |
idaholab__MontePy-493 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "montepy/__init__.py"
},
{
"changes": {
"added_entities": [
"montepy/input_parser/input_file.py:MCNP_InputFile.from_open_stream"
],... | idaholab/MontePy | 26cfedcfc5d19f090e888be7a607cf83160aad9b | Implement MCNP_Problem.write(file_handle)
**Is your feature request related to a problem? Please describe.**
In addition to `MCNP_Problem.write_to_file(new_problem)`, implement `MCNP_Problem.write_to_stream(file_stream)`. Then, users can write to any open file stream, including `io.StringIO`.
**Describe the sol... | diff --git a/doc/source/changelog.rst b/doc/source/changelog.rst
index 14d8a0bf..ea0401a7 100644
--- a/doc/source/changelog.rst
+++ b/doc/source/changelog.rst
@@ -3,11 +3,15 @@ MontePy Changelog
#Next Version#
--------------
+**Features Added**
+
+* Write problems to either file paths or streams (file handles) with... |
idaholab__MontePy-538 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"montepy/numbered_object_collection.py:NumberedDataObjectCollection.append"
],
"edited_modules": [
"montepy/numbered_object_collection.py:NumberedDataObjectCollection"
]
},
... | idaholab/MontePy | 5a12a285e174088f81418a09daa90ab6b4827769 | Materials.append_renumber adds double materials
**Describe the bug**
If you use `problem.materials.append_renumber(mat)` there will be two instances of `mat` in `problem.data_inputs` which will break a lot of things.
**To Reproduce**
``` python
problem = montepy.read_input("foo.imcnp")
new_mat = ...
... | diff --git a/doc/source/changelog.rst b/doc/source/changelog.rst
index 530c536c..89e89561 100644
--- a/doc/source/changelog.rst
+++ b/doc/source/changelog.rst
@@ -4,6 +4,10 @@ MontePy Changelog
#Next Version#
--------------
+**Bug Fixes**
+
+* Fixed a bug where ``problem.materials.append_renumber`` would double add... |
idaholab__MontePy-553 | [
{
"changes": {
"added_entities": [
"montepy/input_parser/input_file.py:MCNP_InputFile.is_stream"
],
"added_modules": null,
"edited_entities": [
"montepy/input_parser/input_file.py:MCNP_InputFile.__init__",
"montepy/input_parser/input_file.py:MCNP_InputFile.from_op... | idaholab/MontePy | 2b510c07ac9a2d027c31560879a094e2f539afb8 | Add support for reading from non-file steams
**Is your feature request related to a problem? Please describe.**
It would be nice (mainly in testing) to do:
``` python
fh = io.StringIO()
fh.write(...)
fh.seek(0)
problem = montepy.read_input(fh)
```
**Describe the solution you'd like**
`montepy.read_input`... | diff --git a/doc/source/changelog.rst b/doc/source/changelog.rst
index 86568400..9a219af4 100644
--- a/doc/source/changelog.rst
+++ b/doc/source/changelog.rst
@@ -1,6 +1,13 @@
MontePy Changelog
=================
+#Next Version#
+--------------
+
+**Bug Fixes**
+
+* Fixed bug where file streams couldn't actually be ... |
idaholab__MontePy-563 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"montepy/cell.py:_number_validator",
"montepy/cell.py:Cell.number"
],
"edited_modules": [
"montepy/cell.py:_number_validator",
"montepy/cell.py:Cell"
]
},
... | idaholab/MontePy | c5b84e65f88e8dcca337fa321300a1fce42e8095 | Remove O(N^2) operation from NumberedObjectCollection
**Is your feature request related to a problem? Please describe.**
I was analyzing some data from parsing times and found that we have O(N^2) scaling despite fixing #510. After some investigation I found the culprit is in `NumberedObjectCollections.append`. This ... | diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index c636a23f..630f96d9 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -49,7 +49,8 @@ jobs:
test:
runs-on: ubuntu-latest
- permissions: write-all
+ permissions:
+ actions: write
strategy:
... |
idaholab__MontePy-598 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"montepy/data_inputs/material.py:Material._update_values"
],
"edited_modules": [
"montepy/data_inputs/material.py:Material"
]
},
"file": "montepy/data_inputs/material.py... | idaholab/MontePy | e6c0e860a9c7efbd4adf70c0448eb294b2f6c0f1 | Montepy is_atomic_fraction does not work as expected
<!--
**Reminders**
1. This is not a place to debug your MCNP models
1. MCNP is export controlled and only its 6.2 and 6.3 user manuals are public. Don't include any information about MCNP which is not in those manuals.
1. Your model may be export controlled, or p... | diff --git a/.github/pull_request_template.md b/.github/pull_request_template.md
index 2e4bb9b4..d3a13b32 100644
--- a/.github/pull_request_template.md
+++ b/.github/pull_request_template.md
@@ -13,29 +13,35 @@ Please provide a summary of the change, referencing the issue it fixes, if appli
- [ ] I have performed a se... |
idaholab__MontePy-612 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "doc/source/conf.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules"... | idaholab/MontePy | 57aaac51030af591f65576eaa309e9d4653d9e01 | Write getting started and migration guide for Materials in 1.0 | diff --git a/doc/source/api/montepy.particle.rst b/doc/source/api/montepy.particle.rst
index 7b887d96..42d3cb64 100644
--- a/doc/source/api/montepy.particle.rst
+++ b/doc/source/api/montepy.particle.rst
@@ -4,6 +4,5 @@ montepy.particle module
.. automodule:: montepy.particle
:members:
- :inherited-members:
... |
idaholab__MontePy-663 | [
{
"changes": {
"added_entities": [
"montepy/data_inputs/material.py:Material.contains_all",
"montepy/data_inputs/material.py:Material.contains_any",
"montepy/data_inputs/material.py:Material._promote_nuclide",
"montepy/data_inputs/material.py:Material._contains_arb"
]... | idaholab/MontePy | 572214d91b3e2e4b9abf163acd9e5a92fd9ae1e9 | Search for Material Nuclides containing just elemental data.
**Is your feature request related to a problem? Please describe.**
Sometimes you get a model with legacy nuclear data, e.g., `26000.50c` that you want to replace.
However, if you do `problem.materials.get_containing("26000.50c")` you will get all iron isotop... | diff --git a/doc/source/changelog.rst b/doc/source/changelog.rst
index dc907ef1..6c16d227 100644
--- a/doc/source/changelog.rst
+++ b/doc/source/changelog.rst
@@ -14,7 +14,7 @@ MontePy Changelog
* Made it easier to create an Isotope (now Nuclide): ``montepy.Nuclide("H-1.80c")`` (:issue:`505`).
* When a typo in an obj... |
idaholab__MontePy-680 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"montepy/cell.py:Cell.atom_density",
"montepy/cell.py:Cell.mass_density",
"montepy/cell.py:Cell.remove_duplicate_surfaces",
"montepy/cell.py:Cell.clone"
],
"edited_mod... | idaholab/MontePy | 003c5ef963d6e60105874b6a0e7e65d9593f1ee3 | Relax 'float' type enforcement to any real number and 'int' type enforcement to any integral
**Is your feature request related to a problem? Please describe.**
Numeric variables come in many different types. Virtually all places where `float` is enforced, any real number is valid instead. An `int`, `numpy.uint8`, or `n... | diff --git a/doc/source/changelog.rst b/doc/source/changelog.rst
index 6c16d227..2b6d4450 100644
--- a/doc/source/changelog.rst
+++ b/doc/source/changelog.rst
@@ -25,6 +25,7 @@ MontePy Changelog
* An error is now raised when typos in object attributes are used, e.g., ``cell.nubmer`` (:issue:`508`).
* Warnings are no ... |
idaholab__MontePy-681 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"montepy/data_inputs/importance.py:Importance.__str__"
],
"edited_modules": [
"montepy/data_inputs/importance.py:Importance"
]
},
"file": "montepy/data_inputs/importance... | idaholab/MontePy | 966e0de809c4123621d4c25b3afd32e68d0bfd15 | Blank importance objects can't be printed
<!--
**Reminders**
1. This is not a place to debug your MCNP models
1. MCNP is export controlled and only its 6.2 and 6.3 user manuals are public. Don't include any information about MCNP which is not in those manuals.
1. Your model may be export controlled, or proprietary.... | diff --git a/.gitignore b/.gitignore
index 5f1cbc17..ec84e334 100644
--- a/.gitignore
+++ b/.gitignore
@@ -15,6 +15,7 @@ doc/build/*
.coverage
.hypothesis/
.idea/
+.venv/
.ipynb_checkpoints/
montepy/_version.py
diff --git a/AUTHORS b/AUTHORS
index 9d2c6cbd..5d9d47bf 100644
--- a/AUTHORS
+++ b/AUTHORS
@@ -1,3 +1,... |
idaholab__MontePy-707 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"montepy/data_inputs/universe_input.py:UniverseInput._tree_value"
],
"edited_modules": [
"montepy/data_inputs/universe_input.py:UniverseInput"
]
},
"file": "montepy/data... | idaholab/MontePy | d8ae7899d506897c3d7ec409baafd21c719799e7 | Bug with no default universe
**Describe the bug**
When a cell is made from scratch, has no universe, and universes are used in a problem (I think) an `AttributeError` is raised.
**To Reproduce**
``` python
import montepy
problem = montepy.read_input("demo/pin_cell.imcnp")
universe = montepy.Universe(100)
proble... | diff --git a/doc/source/changelog.rst b/doc/source/changelog.rst
index 573dd5cb..953c134f 100644
--- a/doc/source/changelog.rst
+++ b/doc/source/changelog.rst
@@ -36,6 +36,7 @@ MontePy Changelog
* Fixed bug where ``surf.is_reflecting`` would put an extra space in the output e.g., ``* 1 PZ...`` (:issue:`697`).
* Fixed... |
idaholab__MontePy-710 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"montepy/input_parser/syntax_node.py:ValueNode.format"
],
"edited_modules": [
"montepy/input_parser/syntax_node.py:ValueNode"
]
},
"file": "montepy/input_parser/syntax_n... | idaholab/MontePy | 3f83b66fb11c21435237b2a7b38737cb41ec3ba4 | Surfaces can't be unset from is_reflecting
**Describe the bug**
This seems to be closely tied to #698. When you parse a surface, set `is_reflecting=False` and then export it, the output is not updated.
**To Reproduce**
``` python
In [1]: import montepy
In [2]: surf = montepy.surfaces.Surface("*1 P 0.0")
In [3]: ... | diff --git a/doc/source/changelog.rst b/doc/source/changelog.rst
index cb72a5e1..e14f48a3 100644
--- a/doc/source/changelog.rst
+++ b/doc/source/changelog.rst
@@ -37,6 +37,7 @@ MontePy Changelog
* Fixed bug where setting a lattice would print as ``LAT=None``. Also switched ``CellModifier`` to print in the cell block b... |
idaholab__MontePy-717 | [
{
"changes": {
"added_entities": [
"montepy/data_inputs/fill.py:_verify_3d_index",
"montepy/data_inputs/fill.py:Fill._update_cell_transform_values",
"montepy/data_inputs/fill.py:Fill._update_multi_index_limits"
],
"added_modules": [
"montepy/data_inputs/fill.py:... | idaholab/MontePy | 366d87d078b1fba6b70c61fec5109790e5524d1c | Multi-Universe fill can't be created from scratch
**Describe the bug**
Multi-universe fills can't be realistically updated, and is really just read-only
**To Reproduce**
``` python
import montepy
cell = montepy.Cell(number=1)
lattice_cell.fill.multiple_universes = True
inst_universe = montepy.Universe(1)
guide_unive... | diff --git a/doc/source/changelog.rst b/doc/source/changelog.rst
index 10a31c93..ff57bacf 100644
--- a/doc/source/changelog.rst
+++ b/doc/source/changelog.rst
@@ -38,6 +38,7 @@ MontePy Changelog
* Fixed bug that wouldn't allow cloning most surfaces (:issue:`704`).
* Fixed bug that crashed when some cells were not ass... |
idaholab__MontePy-723 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"montepy/mcnp_object.py:MCNP_Object.wrap_string_for_mcnp"
],
"edited_modules": [
"montepy/mcnp_object.py:MCNP_Object"
]
},
"file": "montepy/mcnp_object.py"
}
] | idaholab/MontePy | 021078c284c75513b34d625a742221f86e6cbb2f | Bug in line expansion with adding extra lines
**Describe the bug**
When you add so much information that a line must wrap it creates a bug when exporting.
**To Reproduce**
``` python
import montepy
import numpy as np
problem = montepy.read_input("tests/inputs/test_universe.imcnp")
fill = problem.cells[1].fill
univer... | diff --git a/doc/source/changelog.rst b/doc/source/changelog.rst
index ff57bacf..3a9a2d1f 100644
--- a/doc/source/changelog.rst
+++ b/doc/source/changelog.rst
@@ -37,7 +37,7 @@ MontePy Changelog
* Fixed bug where setting a lattice would print as ``LAT=None``. Also switched ``CellModifier`` to print in the cell block b... |
ifosch__accloudtant-104 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"accloudtant/aws/prices.py:process_model"
],
"edited_modules": [
"accloudtant/aws/prices.py:process_model"
]
},
"file": "accloudtant/aws/prices.py"
},
{
"changes... | ifosch/accloudtant | 8fdb36de3e41cc719b1e1df95c1083a9ea427392 | Create footer for report
When I use the `report` command
I want to get a footer with totals. | diff --git a/accloudtant/aws/prices.py b/accloudtant/aws/prices.py
index 44435af..1cb74ef 100644
--- a/accloudtant/aws/prices.py
+++ b/accloudtant/aws/prices.py
@@ -143,7 +143,8 @@ def process_model(url, instances=None):
instances = {}
js_name = url.split('/')[-1]
pricing = requests.get(url)
- for... |
ifosch__accloudtant-108 | [
{
"changes": {
"added_entities": [
"accloudtant/aws/reports.py:Reports.print_report"
],
"added_modules": null,
"edited_entities": [
"accloudtant/aws/reports.py:Reports.__init__",
"accloudtant/aws/reports.py:Reports.__repr__"
],
"edited_modules": [
... | ifosch/accloudtant | b662c13380e9e5c42232e51ef3ef059c679ad5e9 | CSV as output format
The table format is great to see the data in the terminal, but to facilytate the import into other tools, CSV is a best (and simple) choice. | diff --git a/accloudtant/aws/reports.py b/accloudtant/aws/reports.py
index 0f56ea5..6754f6b 100644
--- a/accloudtant/aws/reports.py
+++ b/accloudtant/aws/reports.py
@@ -22,15 +22,15 @@ from accloudtant.aws.reserved_instance import ReservedInstance
from accloudtant.aws.prices import Prices
import sys
-
class Report... |
ifosch__accloudtant-26 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"accloudtant/aws/prices/__init__.py:Prices.__init__"
],
"edited_modules": [
"accloudtant/aws/prices/__init__.py:Prices"
]
},
"file": "accloudtant/aws/prices/__init__.py"... | ifosch/accloudtant | 66343620af6679769c3f5a7c727ae5d3492dc5ac | Warnings on non supported pricelists vanished
When printing prices, there were a nice list of warnings about problems getting the data.
Since the addition of the two commands, this list vanished. | diff --git a/accloudtant/aws/prices/__init__.py b/accloudtant/aws/prices/__init__.py
index c038349..3b0dec6 100644
--- a/accloudtant/aws/prices/__init__.py
+++ b/accloudtant/aws/prices/__init__.py
@@ -12,8 +12,11 @@ from accloudtant.utils import fix_lazy_json
class Prices(object):
def __init__(self):
- s... |
ifosch__accloudtant-52 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"accloudtant/aws/reports.py:Reports.find_reserved_instance",
"accloudtant/aws/reports.py:Reports.__repr__"
],
"edited_modules": [
"accloudtant/aws/reports.py:Reports"
]
... | ifosch/accloudtant | 71d752b9244ff84978a83413be84035a92d5c077 | Add price information to EC2 instances information
<!---
@huboard:{"order":6.0732421875,"milestone_order":0.09375,"custom_state":""}
-->
| diff --git a/accloudtant/aws/reports.py b/accloudtant/aws/reports.py
index 26af2d1..905018e 100644
--- a/accloudtant/aws/reports.py
+++ b/accloudtant/aws/reports.py
@@ -16,10 +16,13 @@ class Reports(object):
def find_reserved_instance(self):
for instance in self.instances:
- instance.current ... |
ifosch__accloudtant-82 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"accloudtant/aws/instance.py:Instance.name"
],
"edited_modules": [
"accloudtant/aws/instance.py:Instance"
]
},
"file": "accloudtant/aws/instance.py"
}
] | ifosch/accloudtant | 9dd6000060b4bddfa5366ef3102fe7d42371d514 | Fails with Python 3
My system have Python 3 installed by default (Archlinux). This is the output of `accloudtant report`:
```
Traceback (most recent call last):
File "/usr/bin/accloudtant", line 22, in <module>
cli()
File "/usr/lib/python3.5/site-packages/click/core.py", line 716, in __call__
return... | diff --git a/accloudtant/aws/instance.py b/accloudtant/aws/instance.py
index 4e19b2d..2073f28 100644
--- a/accloudtant/aws/instance.py
+++ b/accloudtant/aws/instance.py
@@ -62,7 +62,7 @@ class Instance(object):
@property
def name(self):
names = [tag for tag in self.tags if tag['Key'] == 'Name']
- ... |
ifosch__accloudtant-88 | [
{
"changes": {
"added_entities": [
"accloudtant/aws/instance.py:Instance.__repr__"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"accloudtant/aws/instance.py:Instance"
]
},
"file": "accloudtant/aws/instance.py"
},
{
"ch... | ifosch/accloudtant | 79e3cf915208ffd58a63412ffc87bd48f8bfb2dd | Iterate over appropriate subsets for performance improvement
When generating reports, the code iterates over all instances, and all reserved instances, to get the links between these, the report should iterate over running instances and active reserved instances, only. | diff --git a/accloudtant/aws/instance.py b/accloudtant/aws/instance.py
index d83c3dc..f360c03 100644
--- a/accloudtant/aws/instance.py
+++ b/accloudtant/aws/instance.py
@@ -28,6 +28,9 @@ class Instance(object):
'best': 0.0,
}
+ def __repr__(self):
+ return "<accloudtant.aws.instance.In... |
ihmwg__python-ihm-61 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"ihm/dumper.py:_ModelDumper.dump_atoms"
],
"edited_modules": [
"ihm/dumper.py:_ModelDumper"
]
},
"file": "ihm/dumper.py"
}
] | ihmwg/python-ihm | fb9199d655bef19b66674dc6334ea24ecd68259b | Missing auth_seq_id from _atom_site
I am using python-ihm to generate mmcif files based on pdbs generated by docking.
However I noticed that `_atom_site.auth_seq_id` is missing from the dump atoms function: https://github.com/ihmwg/python-ihm/blob/fb9199d655bef19b66674dc6334ea24ecd68259b/ihm/dumper.py#L1461
Then ... | diff --git a/ihm/dumper.py b/ihm/dumper.py
index 4511db3..c9189a1 100644
--- a/ihm/dumper.py
+++ b/ihm/dumper.py
@@ -1464,7 +1464,7 @@ class _ModelDumper(Dumper):
with writer.loop("_atom_site",
["group_PDB", "id", "type_symbol",
"label_atom_id", "label_alt_i... |
ikalchev__HAP-python-187 | [
{
"changes": {
"added_entities": [
"pyhap/accessory.py:Accessory.set_primary_service"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"pyhap/accessory.py:Accessory"
]
},
"file": "pyhap/accessory.py"
},
{
"changes": {
... | ikalchev/HAP-python | 5ac5b8307b1c66481958c60fb84691ea4842aca8 | New Accessory Typs + Services
It seems their might have been new accessories added with iOS version 12.2 beta 1.
I recently saw a feature request to add a TV service and found this afterwards:
https://github.com/KhaosT/HAP-NodeJS/pull/638
I tried to download the current HAP specifications, but it seems they aren't... | diff --git a/pyhap/accessory.py b/pyhap/accessory.py
index ed103a6..f5115b1 100644
--- a/pyhap/accessory.py
+++ b/pyhap/accessory.py
@@ -115,6 +115,12 @@ class Accessory:
self.add_service(service)
return service
+ def set_primary_service(self, primary_service):
+ """Set the primary service... |
ikalchev__HAP-python-243 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pyhap/camera.py:Camera.set_endpoints"
],
"edited_modules": [
"pyhap/camera.py:Camera"
]
},
"file": "pyhap/camera.py"
},
{
"changes": {
"added_entities": n... | ikalchev/HAP-python | feba43826d144e439a92eb8260863a6cea96b7fa | Unable to encode TLV value for camera
When trying to create a camera I'm getting this exception:
```
[hap_server] Exception in set_characteristics: object of type 'int' has no len()
Traceback (most recent call last):
File "/home/homekit/camera_test/venv/lib/python3.7/site-packages/pyhap/hap_server.py", line 559... | diff --git a/pyhap/camera.py b/pyhap/camera.py
index 5a6fca8..155aad9 100644
--- a/pyhap/camera.py
+++ b/pyhap/camera.py
@@ -682,8 +682,8 @@ class Camera(Accessory):
SETUP_TYPES['ADDRESS'], res_address_tlv,
SETUP_TYPES['VIDEO_SRTP_PARAM'], video_srtp_tlv,
SETUP_TYPES['AUDIO_SRTP_P... |
ikalchev__HAP-python-328 | [
{
"changes": {
"added_entities": [
"pyhap/accessory_driver.py:AccessoryDriver._validate_start",
"pyhap/accessory_driver.py:AccessoryDriver.async_start"
],
"added_modules": null,
"edited_entities": [
"pyhap/accessory_driver.py:AccessoryDriver.__init__",
"py... | ikalchev/HAP-python | e8920d8450039e30bdaf0a4298405574f532018f | Do not pass `loop` to asyncio.Event
Passing the loop argument to constructors is deprecated in Python 3.8 and will be removed in Python 3.10. You can trigger this as an error now by running the test suite with error on warning:
```
py.test tests/ -Werror -x
```
Making this change would require to remove all pas... | diff --git a/.github/workflows/ci.yaml b/.github/workflows/ci.yaml
index 9c730b0..6113907 100644
--- a/.github/workflows/ci.yaml
+++ b/.github/workflows/ci.yaml
@@ -9,7 +9,7 @@ jobs:
runs-on: ubuntu-latest
strategy:
matrix:
- python-version: [3.5, 3.6, 3.7, 3.8]
+ python-version: [3.5, 3.... |
ikalchev__HAP-python-343 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pyhap/accessory_driver.py:AccessoryDriver.start",
"pyhap/accessory_driver.py:AccessoryDriver.publish"
],
"edited_modules": [
"pyhap/accessory_driver.py:AccessoryDriver"
... | ikalchev/HAP-python | ac90099f5c007369a9e75d65dbdb78f1525ea2a1 | module 'asyncio' has no attribute 'SafeChildWatcher'
Upon running any HAP-pyhon service the following exception is caught:
```
[accessory_driver] Loading Accessory state from `busy_home.state`
[accessory_driver] Starting the event loop
[accessory_driver] Closed the event loop
Traceback (most recent call last):
... | diff --git a/pyhap/accessory_driver.py b/pyhap/accessory_driver.py
index 5db6ac2..96c1426 100644
--- a/pyhap/accessory_driver.py
+++ b/pyhap/accessory_driver.py
@@ -19,7 +19,6 @@ import asyncio
import base64
from concurrent.futures import ThreadPoolExecutor
import hashlib
-import json
import logging
import os
imp... |
ikalchev__HAP-python-458 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pyhap/hap_handler.py:HAPServerHandler._pair_verify_two"
],
"edited_modules": [
"pyhap/hap_handler.py:HAPServerHandler"
]
},
"file": "pyhap/hap_handler.py"
}
] | ikalchev/HAP-python | d9243b6abfbde59c03560b10f4a926a39ab1e1e2 | Stopped working after upgrading to iOS 17
I have configured a bridge and a single door accessory in home assistant.
They stopped working after updating to iOS 17 my AppleTV & iPhone.
I removed them both from iOS home app and from Home Assistant and tried to reconfigure them as before, but pairing never succeeds. Af... | diff --git a/pyhap/hap_handler.py b/pyhap/hap_handler.py
index 103cdc1..399bfcc 100644
--- a/pyhap/hap_handler.py
+++ b/pyhap/hap_handler.py
@@ -606,6 +606,13 @@ class HAPServerHandler:
data = tlv.encode(HAP_TLV_TAGS.SEQUENCE_NUM, HAP_TLV_STATES.M4)
self._send_tlv_pairing_response(data)
+
+ i... |
ikalnytskyi__picobox-79 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/picobox/_box.py:Box.pass_"
],
"edited_modules": [
"src/picobox/_box.py:Box"
]
},
"file": "src/picobox/_box.py"
}
] | ikalnytskyi/picobox | fbc02ea61d8c65588e9c74724611715920711728 | Add coroutine functions support to `pass_` decorator
Currently the `picobox.pass_()` decorator can be successfully applied to coroutine functions, and such a coroutine function can be successfully used. For instance, the following code works as expected:
```python
@picobox.pass_("database_session")
async def get_m... | diff --git a/docs/index.rst b/docs/index.rst
index eff5e2b..12c0e27 100644
--- a/docs/index.rst
+++ b/docs/index.rst
@@ -358,6 +358,15 @@ Release Notes
backward incompatible changes will be released along with bumping major
version component.
+4.1.0
+`````
+
+(unreleased)
+
+* Fix a bug when a coroutine fun... |
ikamensh__flynt-163 | [
{
"changes": {
"added_entities": [
"src/flynt/cli.py:state_from_args"
],
"added_modules": [
"src/flynt/cli.py:state_from_args"
],
"edited_entities": [
"src/flynt/cli.py:run_flynt_cli"
],
"edited_modules": [
"src/flynt/cli.py:run_flynt_cli... | ikamensh/flynt | 5b071580192a78694280da0681e07b5262801c4e | Transform concatenation does not work with "--string"
Version/Dist information:
`Python 3.10.6`
`Bash v5.1.16(1)-release`
`Ubuntu 22.04`
`x86_64`
Expected behavior is achieved when reading from a python file.
`cat test.py`:
```
#!/bin/env python
test_string = 'This' + ' ' + 'may ' + ' ' + 'not' + ' ' + 'wo... | diff --git a/src/flynt/cli.py b/src/flynt/cli.py
index f61f21d..67132db 100644
--- a/src/flynt/cli.py
+++ b/src/flynt/cli.py
@@ -7,7 +7,7 @@ import warnings
from typing import List, Optional
from flynt import __version__
-from flynt.api import fstringify, fstringify_code_by_line, fstringify_content
+from flynt.api ... |
ikamensh__flynt-189 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "src/flynt/__init__.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/flynt/stat... | ikamensh/flynt | c573f8b05cfb6ffe1f92bb72bf59d3851a81cbc1 | transform-joins breaks code
Here's my flynt output:
```
Running flynt v.1.0.0
Using config file at /asdf/qwer/pyproject.toml
Using following options: Namespace(verbose=True, quiet=False, no_multiline=False, line_length=88, dry_run=True, stdout=False, string=False, transform_percent=True, transform_format=True, tran... | diff --git a/pyproject.toml b/pyproject.toml
index 22220a9..9bbd0af 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -83,7 +83,7 @@ max-branches = 18
max-statements = 67
[tool.ruff.per-file-ignores]
-"test/*" = ["I"]
+"test/*" = ["I", "S"]
"test/integration/*" = [
"F523",
"F821",
diff --git a/src/flyn... |
ikamensh__flynt-72 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/flynt/api.py:_fstringify_file"
],
"edited_modules": [
"src/flynt/api.py:_fstringify_file"
]
},
"file": "src/flynt/api.py"
},
{
"changes": {
"added_ent... | ikamensh/flynt | b7fc1b8ee2964fad30ed96c48d53964673ae766f | feature request: dryrun mode?
Would it be possible to support a mode that doesn't modify files in place? Perhaps just printing a diff to stdout about what would change, and then exit status based on whether any files would be modified? | diff --git a/README.md b/README.md
index a4f43ec..797566f 100644
--- a/README.md
+++ b/README.md
@@ -42,6 +42,10 @@ optional arguments:
--no-multiline convert only single line expressions
-ll LINE_LENGTH, --line-length LINE_LENGTH
for expressions spanning multiple lines, convert on... |
ikegami-yukino__jaconv-15 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"jaconv/jaconv.py:alphabet2kana"
],
"edited_modules": [
"jaconv/jaconv.py:alphabet2kana"
]
},
"file": "jaconv/jaconv.py"
}
] | ikegami-yukino/jaconv | 95d5eaf7f20ef2da9b318262a6ac321cb58cb943 | alphabet2kana bug
1. `su` is converted before `tsu` leading to words like 'atsui' being converted to 「あっすい」
2. Trailing `oh` is converted too soon leaving words like 'itoh' as 「いっおお」
3. Remaining `oh` replacements should be done after other replacements, current placement causes words like `toho` to become 「っおおお」
3.... | diff --git a/README.rst b/README.rst
index 76c89af..60e4c6c 100644
--- a/README.rst
+++ b/README.rst
@@ -41,12 +41,12 @@ See also `document <http://ikegami-yukino.github.io/jaconv/jaconv.html>`_
# half-width character to full-width character
# but only ascii characters
- jaconv.h2z(u'abc', kana=False, ascii=Tr... |
ilevkivskyi__com2ann-21 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/com2ann.py:wrap_function_header"
],
"edited_modules": [
"src/com2ann.py:wrap_function_header"
]
},
"file": "src/com2ann.py"
}
] | ilevkivskyi/com2ann | bb8a37fa473060623ff4589b3cf3f4ebf4f1eb09 | When using --wrap-signatures, return annotations with commas also get wrapped
For example:
```python
def func(arg1: SomeVeryLongType1,
arg2: SomeVeryLongType2) -> Dict[str,
int]:
...
```
This is not a syntax error, but looks ugly. | diff --git a/src/com2ann.py b/src/com2ann.py
index b1683e3..166672e 100644
--- a/src/com2ann.py
+++ b/src/com2ann.py
@@ -459,6 +459,7 @@ def wrap_function_header(header: str) -> List[str]:
parts: List[str] = []
next_part = ''
nested = 0
+ complete = False # Did we split all the arguments inside (...)... |
ilevkivskyi__com2ann-35 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/com2ann.py:process_assign"
],
"edited_modules": [
"src/com2ann.py:process_assign"
]
},
"file": "src/com2ann.py"
}
] | ilevkivskyi/com2ann | ce7583b5a98ee5b9dbeb8a8cef4239893e230291 | Type comment left in place when expression is type ignored
Thanks for this tool, it's really useful :)
If you have code like this:
``` python
foo = object()
bar = (
# Comment which explains why this ignored
foo.quox # type: ignore[attribute]
) # type: Mapping[str, Distribution]... | diff --git a/src/com2ann.py b/src/com2ann.py
index b3a892e..9e853bd 100644
--- a/src/com2ann.py
+++ b/src/com2ann.py
@@ -467,7 +467,8 @@ def process_assign(comment: AssignData, data: FileData,
# We perform the tasks in order from larger line/columns to smaller ones
# to avoid shuffling the line column numbers... |
ilevkivskyi__com2ann-47 | [
{
"changes": {
"added_entities": [
"src/com2ann.py:parse_cli_args",
"src/com2ann.py:rebase_path",
"src/com2ann.py:process_single_entry"
],
"added_modules": [
"src/com2ann.py:parse_cli_args",
"src/com2ann.py:rebase_path",
"src/com2ann.py:process_s... | ilevkivskyi/com2ann | eb07a3119494af56d3ce96ff41466e17f9f83e2a | Accepting multiple input files
It would be much easier to use this tool if it accepted mutliple files as input. I imagine that in that case, `-o` would be forbidden to avoid ambiguity.
I might do a PR, just wanted to check if it would be welcome before doing it. | diff --git a/.github/workflows/lint_python.yml b/.github/workflows/lint_python.yml
index b916402..e709693 100644
--- a/.github/workflows/lint_python.yml
+++ b/.github/workflows/lint_python.yml
@@ -9,7 +9,7 @@ jobs:
with:
python-version: 3.x
- run: pip install --upgrade pip wheel
- - run:... |
ilevkivskyi__com2ann-58 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/com2ann.py:main"
],
"edited_modules": [
"src/com2ann.py:main"
]
},
"file": "src/com2ann.py"
}
] | ilevkivskyi/com2ann | 6fa4c021c8b1cec27ccd8c900c0ddea7faab91bb | Multiple input files are generated to single file
When a command is called with multiple files (ex. `com2ann f1.py f2.py`), then the first file (`f1.py`) is chosen as output for both files.
This is especially problematic when `pre-commit` hook is used. | diff --git a/src/com2ann.py b/src/com2ann.py
index 5e41a5f..f6d0f48 100644
--- a/src/com2ann.py
+++ b/src/com2ann.py
@@ -936,8 +936,8 @@ def main() -> None:
options = Options(**args)
for infile in infiles:
- outfile = outfile or infile
- process_single_entry(in_path=infile, out_path=outfile, o... |
ilevkivskyi__typing_inspect-71 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"typing_inspect.py:get_args"
],
"edited_modules": [
"typing_inspect.py:get_args"
]
},
"file": "typing_inspect.py"
}
] | ilevkivskyi/typing_inspect | 6dd6b38bc12bcbaf814fb0c69a801365b81e3611 | Support Python 3.9
typing_inspect doesn't really work with Python 3.9 right now. There are issues like #60 and #64, but a variety of things need to be updated.
My initial survey (just guessing from poking at implementations; it would be better to have someone review/expand this list who is more intimately familiar wit... | diff --git a/.travis.yml b/.travis.yml
index 1fb80e9..6cf3061 100644
--- a/.travis.yml
+++ b/.travis.yml
@@ -5,6 +5,7 @@ matrix:
fast_finish: true
include:
- python: 3.9
+ - python: 3.9.1
- python: 3.8
- python: 3.7
- python: 3.6
diff --git a/typing_inspect.py b/typing_inspect.py
index d3a0... |
ilevkivskyi__typing_inspect-74 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"typing_inspect.py:get_args"
],
"edited_modules": [
"typing_inspect.py:get_args"
]
},
"file": "typing_inspect.py"
}
] | ilevkivskyi/typing_inspect | d1d46f4c2429dd0a60f902fa7b728d67bb2d1582 | Python 3.9 support breaks List
There was a regression in release 0.7.0 from 0.6.0.
Currently,
```python
>>> from typing import List, Set
>>> from typing_inspect import get_args
>>> get_args(list[str]) # Yay this works! Great to see support for Python 3.9!
(<class 'str'>,)
>>> get_args(List)
Traceback (most ... | diff --git a/typing_inspect.py b/typing_inspect.py
index c11b856..4c765e3 100644
--- a/typing_inspect.py
+++ b/typing_inspect.py
@@ -467,7 +467,8 @@ def get_args(tp, evaluate=None):
if NEW_TYPING:
if evaluate is not None and not evaluate:
raise ValueError('evaluate can only be True in Python ... |
ilevkivskyi__typing_inspect-94 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"typing_inspect.py:get_parameters"
],
"edited_modules": [
"typing_inspect.py:get_parameters"
]
},
"file": "typing_inspect.py"
}
] | ilevkivskyi/typing_inspect | b24da20b0f137e00cd8c511843ff52cb92dcf470 | `get_parameters` throws exception with non-indexed types from `typing` on python 3.10
**python 3.7**
```
>>> from typing import List
>>> from typing_inspect import get_parameters
>>> get_parameters(List)
(~T,)
```
**python 3.10.6**
```
>>> from typing import List
>>> from typing_inspect import get_parameter... | diff --git a/typing_inspect.py b/typing_inspect.py
index d786e96..0268b16 100644
--- a/typing_inspect.py
+++ b/typing_inspect.py
@@ -408,7 +408,11 @@ def get_parameters(tp):
else:
return ()
elif NEW_TYPING:
- if (isinstance(tp, typingGenericAlias) or
+ if (
+ (
+ ... |
iluvcapra__pycmx-12 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pycmx/parse_cmx_statements.py:_parse_cmx3600_line"
],
"edited_modules": [
"pycmx/parse_cmx_statements.py:_parse_cmx3600_line"
]
},
"file": "pycmx/parse_cmx_statements.p... | iluvcapra/pycmx | b6379ec1fe7c300ec1c18a3ef0c2c680e65007c8 | Questions about event.number
I use print(len(events) when using CMX) with a maximum of 999 events, but my edl has more than 4000, the edl encoding is' ISO-8859-1 ', and the EDL.format is 3600. I would like to ask if there is a maximum limit for events. | diff --git a/README.md b/README.md
index c41dd81..6b7c3c1 100644
--- a/README.md
+++ b/README.md
@@ -5,12 +5,13 @@
# pycmx
-The `pycmx` package provides a basic interface for parsing a CMX 3600 EDL and its most most common variations.
+The `pycmx` package provides a basic interface for parsing a CMX 3600 EDL and
... |
imageio__imageio-1048 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "imageio/__init__.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules... | imageio/imageio | ab9653bd86b34002ce5526259dbfc6a860bfb843 | It does not seem to support avif image format
```
import imageio.v3 as iio
im=iio.imread('51.avif')
```
_OSError Traceback (most recent call last)
[<ipython-input-4-2fb2e37d23e4>](https://localhost:8080/#) in <cell line: 2>()
1 import imageio.v3 as iio
----> 2 im=iio.im... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 69ba5da..3d4c9d3 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -7,6 +7,12 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
<!--next-version-placeholder-->
+## v2.32.0 (2023-11-06)
+
+### Feature
+
+* Add support for HEIF format ([#... |
imageio__imageio-1084 | [
{
"changes": {
"added_entities": [
"imageio/core/request.py:SeekableFileObject.readline"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"imageio/core/request.py:SeekableFileObject"
]
},
"file": "imageio/core/request.py"
}
] | imageio/imageio | a4f4c05704065d4ad96e16d1d84467fb4c538613 | AttributeError: 'SeekableFileObject' object has no attribute 'readline'
trouble occur when reading some website address as follow, but same address is ok by skimage.io import imread:
File "/usr/local/lib/python3.8/site-packages/imageio/v2.py", line 359, in imread
with imopen(uri, "ri", **imopen_args) as file:... | diff --git a/imageio/core/request.py b/imageio/core/request.py
index f42da19..47b7c95 100644
--- a/imageio/core/request.py
+++ b/imageio/core/request.py
@@ -697,6 +697,9 @@ class SeekableFileObject:
return res
+ def readline(self):
+ yield from self._file.readline()
+
def tell(self):
... |
imageio__imageio-150 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "imageio/core/__init__.py"
},
{
"changes": {
"added_entities": [
"imageio/core/util.py:image_as_uint"
],
"added_modules": [
... | imageio/imageio | 8f0efc08ae98db69c02dc2820e4e76985cf0e60d | Support writing 16-bit color channels for PNG
I'm trying to transition away from MATLAB and imageio has been incredibly helpful. However, I need to work with 64-bit PNGs (16-bit color channels and 16-bit alpha channel) and although it looks like reading 16-bit channels is supported, writing is not supported.
I creat... | diff --git a/imageio/core/__init__.py b/imageio/core/__init__.py
index 0347ec7..b5cedf0 100644
--- a/imageio/core/__init__.py
+++ b/imageio/core/__init__.py
@@ -6,7 +6,7 @@
(everything but the plugins).
"""
-from .util import Image, Dict, asarray, image_as_uint8, urlopen # noqa
+from .util import Image, Dict, asar... |
imageio__imageio-209 | [
{
"changes": {
"added_entities": [
"imageio/core/request.py:fix_HTTPResponse"
],
"added_modules": [
"imageio/core/request.py:fix_HTTPResponse"
],
"edited_entities": [
"imageio/core/request.py:Request.get_file"
],
"edited_modules": [
"imag... | imageio/imageio | 18721f19cef4a5448cfd54251c474800b6c89948 | UnsupportedOperation seek while reading HTTP uri
I am using imageio for a while, but since I upgraded to python 3.6, I have problems loading an image from an online location
```
imageio.imread(url)
---------------------------------------------------------------------------
UnsupportedOperation ... | diff --git a/imageio/core/request.py b/imageio/core/request.py
index 42185bb..bc07b25 100644
--- a/imageio/core/request.py
+++ b/imageio/core/request.py
@@ -326,6 +326,7 @@ class Request(object):
elif self._uri_type in [URI_HTTP or URI_FTP]:
assert not want_to_write # This should have been tested... |
imageio__imageio-236 | [
{
"changes": {
"added_entities": [
"imageio/plugins/_tifffile.py:test_tifffile"
],
"added_modules": [
"imageio/plugins/_tifffile.py:test_tifffile"
],
"edited_entities": [
"imageio/plugins/_tifffile.py:imsave",
"imageio/plugins/_tifffile.py:TiffWriter... | imageio/imageio | 7df104500646d0cf7dd143aec698ef9ce77b7005 | ffmpeg read_infos bug
Hi,
I just found a bug in the ffmpeg plugin that results in the following traceback:
```python
Traceback (most recent call last):
File "C:/Users/Felix/PycharmProjects/imageio/test.py", line 9, in <module>
vid = imageio.get_reader(filename, 'ffmpeg', ffmpeg_params=['-loglevel', 'fatal'... | diff --git a/imageio/plugins/_tifffile.py b/imageio/plugins/_tifffile.py
index 6072ace..5d87f70 100644
--- a/imageio/plugins/_tifffile.py
+++ b/imageio/plugins/_tifffile.py
@@ -1,9 +1,10 @@
#!/usr/bin/env python
# -*- coding: utf-8 -*-
# tifffile.py
+# styletest: skip
-# Copyright (c) 2008-2017, Christoph Gohlke
-... |
imageio__imageio-255 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"imageio/plugins/tifffile.py:TiffFormat"
]
},
"file": "imageio/plugins/tifffile.py"
}
] | imageio/imageio | 0e0be918f05f8f2812277c9204677b05c7d6f73f | Incorrect image dimensions after reading in 3D+c TIFF
I'm trying to read the following file:
https://www.dropbox.com/s/0ynbscx4cmd5k91/E_z2_512_1um_CONTROL.tif?dl=1
skimage (ie tifffile) reads this correctly, but imageio doesn't — even though I thought it also used tifffile as a backend for tiffs?
```python
I... | diff --git a/imageio/plugins/tifffile.py b/imageio/plugins/tifffile.py
index f6d25ad..a26ea79 100644
--- a/imageio/plugins/tifffile.py
+++ b/imageio/plugins/tifffile.py
@@ -37,8 +37,11 @@ READ_METADATA_KEYS = ('planar_configuration', 'is_fluoview', 'is_nih',
class TiffFormat(Format):
-
""" Provides support fo... |
imageio__imageio-310 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "imageio/core/functions.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"imageio/co... | imageio/imageio | b122f914d2b8f6971f958d925b79261fc8df51f8 | update tifffile
[Version 2017.09.29](https://www.lfd.uci.edu/%7Egohlke/code/tifffile.py.html) brought significant updates for `tifffile.py`, e.g. consolidated access to metadata. At the moment, imageio holds at version 2017.01.12; it would be great if this could be updated. | diff --git a/.travis.yml b/.travis.yml
index 99368c9..11e3828 100644
--- a/.travis.yml
+++ b/.travis.yml
@@ -21,7 +21,7 @@ matrix:
env: TEST_UNIT=0 TEST_STYLE=1
#
- python: "2.7"
- env: TEST_UNIT=1 TEST_INSTALL=1
+ env: TEST_UNIT=1 TEST_INSTALL=1 IS_LEGACY=1
- pyt... |
imageio__imageio-321 | [
{
"changes": {
"added_entities": [
"imageio/plugins/ffmpeg.py:parse_device_names",
"imageio/plugins/ffmpeg.py:parse_ffmpeg_info"
],
"added_modules": [
"imageio/plugins/ffmpeg.py:parse_device_names",
"imageio/plugins/ffmpeg.py:parse_ffmpeg_info"
],
"e... | imageio/imageio | a22145a9ebbd3aa3bc742911e052ed1903381486 | ffmpeg: you are trying to apply an input option to an output file or vice versa. Move this option before the file it belongs to.
I'm trying to get imageio reading only I-frames with ffmpeg plugin. Therefore, I'm using the following line in python:
`video_reader = imageio.get_reader(video_path, 'ffmpeg', ffmpeg_param... | diff --git a/imageio/plugins/ffmpeg.py b/imageio/plugins/ffmpeg.py
index ae17fe2..61be3bf 100644
--- a/imageio/plugins/ffmpeg.py
+++ b/imageio/plugins/ffmpeg.py
@@ -174,6 +174,11 @@ class FfmpegFormat(Format):
Parameters for reading
----------------------
+ fps : scalar
+ The number of frames ... |
imageio__imageio-374 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"imageio/plugins/freeimage.py:FreeimagePngFormat"
]
},
"file": "imageio/plugins/freeimage.py"
},
{
"changes": {
"added_entities": null,
"ad... | imageio/imageio | 7df4f3afd0fb54845d28237f7c794c81e195684a | When should the Pillow plugin apply gamma correction?
*original title: Reading PNG files differently than scipy.misc*
I've been using `scipy.misc.imread`for reading (tomographic) images for processing.
After a recent upgrade of my system I'm told this is deprecated in favor of `imageio.imread`.
Unfortunately my... | diff --git a/imageio/plugins/freeimage.py b/imageio/plugins/freeimage.py
index 2e52c3d..7f93cb6 100644
--- a/imageio/plugins/freeimage.py
+++ b/imageio/plugins/freeimage.py
@@ -195,7 +195,7 @@ class FreeimagePngFormat(FreeimageFormat):
Parameters for reading
----------------------
ignoregamma : bool
- ... |
imageio__imageio-429 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"imageio/core/request.py:Request.__init__",
"imageio/core/request.py:Request._parse_uri",
"imageio/core/request.py:Request.get_file",
"imageio/core/request.py:Request.finish"
... | imageio/imageio | 1a7f572a3bff99e479f66c3e58720443caabe4b9 | Failure to write when using a file for plugins using get_local_filename
Hi,
It's said in the [docs](https://imageio.readthedocs.io/en/stable/userapi.html#imageio.imwrite) that I can use file objects for imread/imwrite functions
but actually it's only true for PIL, so this code
```python
import imageio
import n... | diff --git a/imageio/core/request.py b/imageio/core/request.py
index 76eccdf..99ef28f 100644
--- a/imageio/core/request.py
+++ b/imageio/core/request.py
@@ -104,6 +104,7 @@ class Request(object):
# To handle the plugin side
self._file = None # To store the file instance
+ self._file_is_local... |
imageio__imageio-447 | [
{
"changes": {
"added_entities": null,
"added_modules": [
"imageio/plugins/freeimage.py:FreeimagePnmFormat"
],
"edited_entities": null,
"edited_modules": null
},
"file": "imageio/plugins/freeimage.py"
}
] | imageio/imageio | 88b2a43cea81139e1a76460c68fa9aadebadfc1e | PPM-FI not creating ASCII output
When ssing the PPM-FI format string, no ASCII output is created.
```python
imageio.imwrite(path, image_data, "PPM-FI")
```
Produces for example
```
P6
200 100
65535
<binary data>
```
This is the expected behavior when using PPMRAW-FI. The expected ASCII output would b... | diff --git a/.gitignore b/.gitignore
index ec7c106..35d4389 100644
--- a/.gitignore
+++ b/.gitignore
@@ -33,3 +33,6 @@ __pychache__
# IDE
.idea
+.project
+.pydevproject
+.settings
diff --git a/imageio/plugins/freeimage.py b/imageio/plugins/freeimage.py
index 7f93cb6..ca7db87 100644
--- a/imageio/plugins/freeimage.p... |
imageio__imageio-510 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"imageio/core/format.py:Format.get_reader",
"imageio/core/format.py:Format.get_writer"
],
"edited_modules": [
"imageio/core/format.py:Format"
]
},
"file": "image... | imageio/imageio | 09c34ccd708e1913c8a58459f9db54dbf14210f9 | `if imageio.get_reader(...): pass` fails for FfmpegFormat.Reader objects
The following statement:
`if imageio.get_reader('<video0>'): pass`
raises 'OverflowError: cannot convert float infinity to integer' (at least in Python 2.7)
It seems that `FfmpegFormat.Reader` has no `__nonzero__()` method (nor `__bool__(... | diff --git a/imageio/core/format.py b/imageio/core/format.py
index 34ce741..c5e093a 100644
--- a/imageio/core/format.py
+++ b/imageio/core/format.py
@@ -30,12 +30,22 @@ a format object using ``imageio.formats.add_format()``.
# imageio.get_reader and imageio.get_writer.
import os
+import sys
import numpy as np
... |
imageio__imageio-512 | [
{
"changes": {
"added_entities": [
"imageio/core/request.py:SeekableFileObject.__init__",
"imageio/core/request.py:SeekableFileObject.read",
"imageio/core/request.py:SeekableFileObject.tell",
"imageio/core/request.py:SeekableFileObject.seek",
"imageio/core/request.p... | imageio/imageio | dc212e26c4fdd662f195c017e34f03b184ea6ab0 | UnsupportedOperation seek while reading GIF from HTTP uri
Related to:
https://github.com/imageio/imageio/issues/202
https://github.com/imageio/imageio/issues/238
https://github.com/imageio/imageio/issues/335
Reading GIF images from a HTTP fails with `"UnsupportedOperation: seek"`
For example, try running:
```... | diff --git a/imageio/core/request.py b/imageio/core/request.py
index a4a68bf..dbd455b 100644
--- a/imageio/core/request.py
+++ b/imageio/core/request.py
@@ -340,12 +340,12 @@ class Request(object):
# Open zipfile and open new file object for specific file
self._zipfile = zipfile.ZipFil... |
imageio__imageio-557 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"imageio/core/util.py:Array.__new__"
],
"edited_modules": [
"imageio/core/util.py:Array"
]
},
"file": "imageio/core/util.py"
}
] | imageio/imageio | 4a72d564a6d36d53b5209b8bcc497e8dc5e43bd5 | Creating Array from preexisting Array drops metadata
```python
>>> import numpy as np, imageio
>>> t = imageio.core.Array(np.array([1, 2]), meta={"foo": 1})
>>> (t * 2).meta
Dict([('foo', 1)])
>>> t[:].meta
Dict([('foo', 1)])
>>> imageio.core.Array(t).meta
Dict()
```
Given that most operations on an Array app... | diff --git a/imageio/core/util.py b/imageio/core/util.py
index 8f382e7..c433cae 100644
--- a/imageio/core/util.py
+++ b/imageio/core/util.py
@@ -124,7 +124,7 @@ class Array(np.ndarray):
if not (meta is None or isinstance(meta, dict)):
raise ValueError("Array expects meta data to be a dict.")
... |
imageio__imageio-678 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"imageio/core/request.py:Request.__init__"
],
"edited_modules": [
"imageio/core/request.py:Request"
]
},
"file": "imageio/core/request.py"
}
] | imageio/imageio | e1226c751fb30196879620977d6f4072c45f8719 | imageiov2.10.1. The imwrite will raise ValueError when filename include "#".
Imageio V2.10.1
```
import imageio
import numpy as np
imageio.imwrite('#1.jpg', np.zeros([512, 512, 3], dtype=np.uint8))
```
It will raise ValueError: Could not find a format to read the specified file in ImageMode.single_image mode.
... | diff --git a/imageio/core/request.py b/imageio/core/request.py
index d24e259..d2ddae2 100644
--- a/imageio/core/request.py
+++ b/imageio/core/request.py
@@ -244,8 +244,11 @@ class Request(object):
# Set extension
if self._filename is not None:
- parts = urlparse(self._filename)
- ... |
imankulov__linguee-api-51 | [
{
"changes": {
"added_entities": [
"linguee_api/parser_utils.py:take_first_non_empty_item"
],
"added_modules": [
"linguee_api/parser_utils.py:take_first_non_empty_item"
],
"edited_entities": null,
"edited_modules": null
},
"file": "linguee_api/parser_u... | imankulov/linguee-api | 7ca9ca3dadc77997e7952003f03d7aa8a48a130f | 500 error for "über"
xextract.parsers.ParsingError: Parser String(name="usage_frequency") matched 2 elements ("?" expected).
looks like there are two span with tag_c class.
| diff --git a/linguee_api/parser_utils.py b/linguee_api/parser_utils.py
index cadea2b..6708037 100644
--- a/linguee_api/parser_utils.py
+++ b/linguee_api/parser_utils.py
@@ -55,3 +55,11 @@ def take_first_item(variants) -> Optional[str]:
if not variants["item"]:
return None
return variants["item"][0]
+... |
inbo__niche_vlaanderen-268 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "docs/conf.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"niche_vlaanderen/niche.... | inbo/niche_vlaanderen | 27bb1e1eefa6c771635101841bf6dd8178dbc4ce | Abiotic: use custom acidity OR nutrient_level
* niche_vlaanderen version: 1.0
* Python version: 3
* Operating System: Win
## Niche Python Package question
### Description
If you use mymodel.run( abiotic= True), you need to provide both an input layer for acidity and nutrient_level.
It happens regularly t... | diff --git a/LICENSE b/LICENSE
index 03bf2b2..c70f54f 100644
--- a/LICENSE
+++ b/LICENSE
@@ -1,6 +1,6 @@
MIT License
-Copyright (c) 2017 Instituut voor Natuur en Bosonderzoek (INBO)
+Copyright (c) 2017-2020 Instituut voor Natuur en Bosonderzoek (INBO)
Permission is hereby granted, free of charge, to any person ob... |
indico__flask-multipass-72 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "flask_multipass/__init__.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"flask_mu... | indico/flask-multipass | d7d885326f8f9f40126af2b7dda4808d222391b7 | Type error on init_app
```
File ".../site-packages/flask_multipass/util.py", line 146, in resolve_provider_type
entry_points = importlib_entry_points(group=base._entry_point, name=type_)
TypeError: entry_points() for an unexpected keyword argument 'group'
```
I see this error and version 0.5 dies while loading... | diff --git a/CHANGES.rst b/CHANGES.rst
index 4a63425..0817943 100644
--- a/CHANGES.rst
+++ b/CHANGES.rst
@@ -1,6 +1,11 @@
Changelog
=========
+Version 0.5.1
+-------------
+
+- Fix compatibility with Python 3.8 and 3.9
+
Version 0.5
-----------
diff --git a/flask_multipass/__init__.py b/flask_multipass/__init__... |
inducer__pudb-260 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pudb/ui_tools.py:make_canvas"
],
"edited_modules": [
"pudb/ui_tools.py:make_canvas"
]
},
"file": "pudb/ui_tools.py"
}
] | inducer/pudb | fef17b6f33da7d03758c150b37cd2f84754aa01d | "Canvas text is wider than the maxcol specified" with Chinese
The full script is simple:
```
data = "中文"
```
Run it with
```
pudb3 a.py
```
And press "n" I got this:
```
Traceback (most recent call last):
File "/usr/lib/python3.6/site-packages/pudb/__init__.py", line 83, in runscript
dbg._runscrip... | diff --git a/pudb/ui_tools.py b/pudb/ui_tools.py
index 9997cad..a398865 100644
--- a/pudb/ui_tools.py
+++ b/pudb/ui_tools.py
@@ -1,6 +1,6 @@
from __future__ import absolute_import, division, print_function
import urwid
-from urwid.util import _target_encoding
+from urwid.util import _target_encoding, calc_width
... |
inducer__pycparserext-46 | [
{
"changes": {
"added_entities": [
"pycparserext/ext_c_parser.py:FuncDeclExt.__iter__"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"pycparserext/ext_c_parser.py:FuncDeclExt"
]
},
"file": "pycparserext/ext_c_parser.py"
}
] | inducer/pycparserext | 9e66047b3d3b3c50abe212a319ba42663b796f58 | Cannot traverse nodes using NodeVisitor, FuncDeclExt is not iterable
Using `GnuCParser()` and subclassing `c_ast.NodeVisitor`, I cannot traverse the nodes as in the FuncDefs example in https://github.com/eliben/pycparser/blob/master/examples/func_defs.py
It results in the following error:
```
Traceback (most recen... | diff --git a/pycparserext/ext_c_parser.py b/pycparserext/ext_c_parser.py
index b59d98e..7611ce1 100644
--- a/pycparserext/ext_c_parser.py
+++ b/pycparserext/ext_c_parser.py
@@ -169,6 +169,12 @@ class FuncDeclExt(c_ast.Node):
nodelist.append(("asm", self.asm))
return tuple(nodelist)
+ def __it... |
inducer__pycparserext-52 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pycparserext/ext_c_generator.py:AsmAndAttributesMixin._generate_type"
],
"edited_modules": [
"pycparserext/ext_c_generator.py:AsmAndAttributesMixin"
]
},
"file": "pycpa... | inducer/pycparserext | 9365b816fdad96c28ca5d5a8bad771125c53098e | add support for __volatile__, and __restrict__
I added some support to handle Snapdragon processors, header files. Basically, trivial support for __volatile__ I could have used a #define but this seems to be a better method. I think GCC supports both __XXX and __XXX__ for all of those key words so this is really a mi... | diff --git a/pycparserext/ext_c_generator.py b/pycparserext/ext_c_generator.py
index 3ecccad..297793d 100644
--- a/pycparserext/ext_c_generator.py
+++ b/pycparserext/ext_c_generator.py
@@ -63,7 +63,13 @@ class AsmAndAttributesMixin(object):
if isinstance(modifier, c_ast.ArrayDecl):
... |
inducer__pycparserext-53 | [
{
"changes": {
"added_entities": [
"pycparserext/ext_c_generator.py:GnuCGenerator.visit_RangeExpression"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"pycparserext/ext_c_generator.py:GnuCGenerator"
]
},
"file": "pycparserext/e... | inducer/pycparserext | 667781d692eb69ad4906eb107e168d4384bf006d | GNU C array init with "..." not supported
This is a GNU extension, see [Designated Inits](https://gcc.gnu.org/onlinedocs/gcc/Designated-Inits.html#Designated-Inits) in the GCC manual. However, the GnuCParser doesn't cope:
```
>>> from pycparserext.ext_c_parser import GnuCParser
>>> p=GnuCParser()
>>> p.parse("int widt... | diff --git a/pycparserext/ext_c_generator.py b/pycparserext/ext_c_generator.py
index 751905a..3ecccad 100644
--- a/pycparserext/ext_c_generator.py
+++ b/pycparserext/ext_c_generator.py
@@ -138,6 +138,9 @@ class GnuCGenerator(AsmAndAttributesMixin, CGeneratorBase):
def visit_TypeList(self, n):
return ', '.... |
inducer__pycparserext-62 | [
{
"changes": {
"added_entities": [
"pycparserext/ext_c_parser.py:GnuCParser.p_labeled_statement_4"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"pycparserext/ext_c_parser.py:GnuCParser"
]
},
"file": "pycparserext/ext_c_parser.... | inducer/pycparserext | 502dbb977e9cc9336f447aaaab86c1ee1addb03a | Support for case ranges
Hi,
Thanks for this project!
I see that you've implemented designated range initializers. Would you consider implementing the somewhat related case ranges (https://gcc.gnu.org/onlinedocs/gcc/Case-Ranges.html)? | diff --git a/pycparserext/ext_c_parser.py b/pycparserext/ext_c_parser.py
index 62efb56..f91394e 100644
--- a/pycparserext/ext_c_parser.py
+++ b/pycparserext/ext_c_parser.py
@@ -558,6 +558,15 @@ class GnuCParser(_AsmAndAttributesMixin, CParserBase):
"""
p[0] = RangeExpression(p[2], p[4], coord=self._co... |
inducer__pycparserext-80 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "pycparserext/ext_c_lexer.py"
}
] | inducer/pycparserext | 1c5ca53be93875350856baa6ce72326882c97637 | type cast parsing error in (__typeof(h))spa_meta_first(m) line, __typeof(h) type is not allowed by parser rules
Hello, while trying to run project https://gitlab.com/matpi/pipewire-py
I get an error
```
State : 484
Stack : declaration_specifiers id_declarator declaration_list_opt brace_open unary_expression ... | diff --git a/pycparserext/ext_c_lexer.py b/pycparserext/ext_c_lexer.py
index eb237b6..0d740c9 100644
--- a/pycparserext/ext_c_lexer.py
+++ b/pycparserext/ext_c_lexer.py
@@ -65,7 +65,7 @@ _COMMON_KEYWORDS = [
'__asm__', '__asm', 'asm']
_GNU_KEYWORDS = [
- '__typeof__', 'typeof',
+ '__typeof__', 'typeof', '... |
inducer__pymbolic-58 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pymbolic/parser.py:Parser.parse_terminal",
"pymbolic/parser.py:Parser.parse_postfix"
],
"edited_modules": [
"pymbolic/parser.py:Parser"
]
},
"file": "pymbolic/p... | inducer/pymbolic | 725a184b2a38a1095d83635b9c2efe9b15371584 | [Parser] Incorrect if-else precedence
```python
In [11]: parse("10 if x or y else 20")
```
raises:
```
ParseError: else expected, or found instead at index 8: ...or y else 20...
```
| diff --git a/pymbolic/parser.py b/pymbolic/parser.py
index b846193..cb4cb62 100644
--- a/pymbolic/parser.py
+++ b/pymbolic/parser.py
@@ -37,6 +37,8 @@ _openpar = intern("openpar")
_closepar = intern("closepar")
_openbracket = intern("openbracket")
_closebracket = intern("closebracket")
+_true = intern("True")
+_fals... |
inducer__pytools-222 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pytools/persistent_dict.py:KeyBuilder.update_for_time"
],
"edited_modules": [
"pytools/persistent_dict.py:KeyBuilder"
]
},
"file": "pytools/persistent_dict.py"
}
] | inducer/pytools | a5efddf54fd4467d729ec4118faa1a059b309d0b | `datetime` hashing tests fail
https://github.com/inducer/pytools/actions/runs/8864710333/job/24340173299
@matthiasdiener could you take a look? | diff --git a/pytools/persistent_dict.py b/pytools/persistent_dict.py
index fb77d4b..4090cb4 100644
--- a/pytools/persistent_dict.py
+++ b/pytools/persistent_dict.py
@@ -460,7 +460,7 @@ class KeyBuilder:
import datetime
# Convert to datetime object
- self.rec(key_hash, datetime.datetime.combin... |
influxdata__influxdb-client-python-183 | [
{
"changes": {
"added_entities": [
"influxdb_client/client/write/dataframe_serializer.py:_not_nan"
],
"added_modules": [
"influxdb_client/client/write/dataframe_serializer.py:_not_nan"
],
"edited_entities": [
"influxdb_client/client/write/dataframe_serialize... | influxdata/influxdb-client-python | 91dcafb5e1c7b7854cf225afba87f5bdfe00b3a1 | using Pandas DataFrame can corrupt data
The code in [dataframe_serializer.py](https://github.com/influxdata/influxdb-client-python/blob/91dcafb5e1c7b7854cf225afba87f5bdfe00b3a1/influxdb_client/client/write/dataframe_serializer.py) could use some improvement.
- the code is hard to understand. It operates by building ... | diff --git a/.gitignore b/.gitignore
index 59b4156..3be131d 100644
--- a/.gitignore
+++ b/.gitignore
@@ -114,4 +114,3 @@ sandbox
# OpenAPI-generator
/.openapi-generator*
**/writer.pickle
-/tests/data_frame_file.csv
diff --git a/CHANGELOG.md b/CHANGELOG.md
index db72fe7..50cd774 100644
--- a/CHANGELOG.md
+++ b/CHANGE... |
influxdata__influxdb-client-python-203 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/influxdb_client.py:InfluxDBClient.from_config_file"
],
"edited_modules": [
"influxdb_client/client/influxdb_client.py:InfluxDBClient"
]
},
"file"... | influxdata/influxdb-client-python | 4f1e14e4a01200b1a927e2ca470b3662fcb376fd | `InfluxDBClient.from_config_file()` incompatible with config files generated by `influx setup`
The method `InfluxDBClient.from_config_file()` does not seem to be compatible with the config file format generated by `influx setup` due to quotation marks around strings. Would it be better to make the client deal with the ... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 36afb4f..249f243 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,5 +1,8 @@
## 1.16.0 [unreleased]
+### Features
+1. [#203](https://github.com/influxdata/influxdb-client-python/pull/203): Allow configuring client via TOML file.
+
### Documentation
1. [#202](https://... |
influxdata__influxdb-client-python-218 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "examples/buckets_management.py"
},
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edi... | influxdata/influxdb-client-python | d465ddaba26d9b50bb0529ac259ee1dd360f57aa | Documentation unclear on proper extended usage of WriteApi client
Does the WriteAPI client support context management? If so what does the context manager do - flush, close, wait for batch to complete? I cannot answer any of these queststions reading the doucmentation so I don't know if I should be creating a new inst... | diff --git a/README.rst b/README.rst
index ec0618f..d0c1ce6 100644
--- a/README.rst
+++ b/README.rst
@@ -220,7 +220,7 @@ Writes
The `WriteApi <https://github.com/influxdata/influxdb-client-python/blob/master/influxdb_client/client/write_api.py>`_ supports synchronous, asynchronous and batching writes into InfluxDB 2.0... |
influxdata__influxdb-client-python-222 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/influxdb_client.py:InfluxDBClient.__init__"
],
"edited_modules": [
"influxdb_client/client/influxdb_client.py:InfluxDBClient"
]
},
"file": "influ... | influxdata/influxdb-client-python | 2870071c1e958d085e2c81f815895808ec680fe6 | No request timeout causing points not being written to influxdb
<!--
Thank you for reporting a bug.
* Please add a :+1: or comment on a similar existing bug report instead of opening a new one.
* https://github.com/influxdata/influxdb-client-python/issues?utf8=%E2%9C%93&q=is%3Aissue+is%3Aopen+is%3Aclosed+so... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index f2eaa3b..2ee6a67 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,9 @@
### Features
1. [#203](https://github.com/influxdata/influxdb-client-python/issues/219): Bind query parameters
+### Bug Fixes
+1. [#222](https://github.com/influxdata/influxdb-client-python/... |
influxdata__influxdb-client-python-238 | [
{
"changes": {
"added_entities": [
"influxdb_client/client/util/date_utils.py:DateHelper.__init__"
],
"added_modules": null,
"edited_entities": [
"influxdb_client/client/util/date_utils.py:DateHelper.to_utc"
],
"edited_modules": [
"influxdb_client/clie... | influxdata/influxdb-client-python | be6760d50fac203137e7e2edd91b63c2ed8e68ca | _convert_timestamp assumes passed datetime to be UTC
This function here https://github.com/influxdata/influxdb-client-python/blob/62f93503044dbbd86443555ccfac5cfd8359f91a/influxdb_client/client/write/point.py#L130 assumes a passed datetime object to be in UTC format if no timezone is specified. I find this to be highly... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index dbc23df..891af11 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,7 @@
### Features
1. [#237](https://github.com/influxdata/influxdb-client-python/pull/237): Use kwargs to pass query parameters into API list call - useful for the ability to use pagination.
1. [#2... |
influxdata__influxdb-client-python-254 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/write/dataframe_serializer.py:data_frame_to_list_of_points"
],
"edited_modules": [
"influxdb_client/client/write/dataframe_serializer.py:data_frame_to_list_of_... | influxdata/influxdb-client-python | bccc2b86116c8fd62b82f115dea7d024201e99c1 | Field type is set to `string` when writing `float32` type from Pandas DataFrame
<!--
Thank you for reporting a bug.
* Please add a :+1: or comment on a similar existing bug report instead of opening a new one.
* https://github.com/influxdata/influxdb-client-python/issues?utf8=%E2%9C%93&q=is%3Aissue+is%3Aope... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index bf7506b..7695d7a 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -5,6 +5,9 @@
1. [#241](https://github.com/influxdata/influxdb-client-python/pull/241): Add detail error message for not supported type of `Point.field`
1. [#238](https://github.com/influxdata/influxdb-clien... |
influxdata__influxdb-client-python-270 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/write/dataframe_serializer.py:data_frame_to_list_of_points"
],
"edited_modules": [
"influxdb_client/client/write/dataframe_serializer.py:data_frame_to_list_of_... | influxdata/influxdb-client-python | a2dbc0b4323129a4460c1f85ab6f1b2fc671d38d | Support write_precision in _write_client.write when record is a Pandas dataframe
<!--
Thank you for suggesting an idea to improve this client.
* Please add a :+1: or comment on a similar existing feature request instead of opening a new one.
* https://github.com/influxdata/influxdb-client-python/issues?utf8... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index d545bee..d7466fa 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -6,6 +6,9 @@
### Deprecated
1. [#264](https://github.com/influxdata/influxdb-client-python/pull/264): Deprecated `org_id` options BucketsApi.create_bucket in favor of `org` parameter
+### Bug Fixes
+1. [#... |
influxdata__influxdb-client-python-303 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/influxdb_client.py:InfluxDBClient.__init__"
],
"edited_modules": [
"influxdb_client/client/influxdb_client.py:InfluxDBClient"
]
},
"file": "influ... | influxdata/influxdb-client-python | cf2186200156c1f5cc2008703bb54775241d2aba | re-escaping the \ character when converting to line protocol
- **InfluxDB version: 1.8.5**
- **InfluxDB-python version: 1.18.0**
- **Python version: 3.6.9**
- **Operating system version: Ubuntu 18.04**
influx is re-escaping `\` character when converting to line protocol.
here is my python code
```
from influx... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 255be7d..5ab8620 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,11 +3,16 @@
### Features
1. [#281](https://github.com/influxdata/influxdb-client-python/pull/281): `FluxTable`, `FluxColumn` and `FluxRecord` objects have helpful reprs
1. [#293](https://github.com/infl... |
influxdata__influxdb-client-python-378 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/write/dataframe_serializer.py:DataframeSerializer.__init__",
"influxdb_client/client/write/dataframe_serializer.py:DataframeSerializer.serialize"
],
"edited_mo... | influxdata/influxdb-client-python | 7e09dde76878257c3723a3280f3b9a205d8fbd0a | Regression: invalid field format with NaN values
I noticed a regression in the way NaN values are handled when working with pandas dataframes. Could it be a result of [500835](https://github.com/influxdata/influxdb-client-python/commit/500835f3b1d3b2b87214ede830b750a6018c0ca9#diff-02179d31a524332a9b64b57d464f6a56c0725d... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 8c1cea4..3be0491 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -2,6 +2,7 @@
### Bug Fixes
1. [#375](https://github.com/influxdata/influxdb-client-python/pull/375): Construct `InfluxDBError` without HTTP response
+1. [#378](https://github.com/influxdata/influxdb-clie... |
influxdata__influxdb-client-python-495 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/write/point.py:Point.to_line_protocol",
"influxdb_client/client/write/point.py:_append_time",
"influxdb_client/client/write/point.py:_escape_key",
"influxd... | influxdata/influxdb-client-python | fade9e08ca6e7a60f12091ab0e1701e3dfa01b55 | Warn on measurement starting with hashtags
<!--
Thank you for suggesting an idea to improve this client.
* Please add a :+1: or comment on a similar existing feature request instead of opening a new one.
* https://github.com/influxdata/influxdb-client-python/issues?utf8=%E2%9C%93&q=is%3Aissue+is%3Aopen+is%3... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 4c336bb..09bbb80 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -13,6 +13,7 @@
### Others
1. [#472](https://github.com/influxdata/influxdb-client-python/pull/472): Drop supports for Python 3.6
+1. [#495](https://github.com/influxdata/influxdb-client-python/pull/495): ... |
influxdata__influxdb-client-python-502 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/flux_csv_parser.py:FluxCsvParser.parse_record",
"influxdb_client/client/flux_csv_parser.py:FluxCsvParser.add_column_names_and_tags"
],
"edited_modules": [
... | influxdata/influxdb-client-python | 07224165fb8624ba8dc3cc03a11d7afa7679c67d | FluxTable / FluxRecord can't handle tables with duplicate column labels
### Specifications
-
### Code sample to reproduce problem
Make a query for measurements that include a field called *result* or other labels that occur by default in the [annotated CSV response header](https://docs.influxdata.com/influxd... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 13c59ff..d84e990 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -2,6 +2,7 @@
### Features
1. [#498](https://github.com/influxdata/influxdb-client-python/pull/498): Add possibility to update user's password by `users_api`
+1. [#502](https://github.com/influxdata/influx... |
influxdata__influxdb-client-python-538 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/write/point.py:Point.from_dict",
"influxdb_client/client/write/point.py:Point.__init__",
"influxdb_client/client/write/point.py:Point.to_line_protocol",
"i... | influxdata/influxdb-client-python | 2d1fb2c286ca043ca1dc98ae44fb1814e8ef0f18 | Add uint64 support to line protocol serializer
<!--
Thank you for suggesting an idea to improve this client.
* Please add a :+1: or comment on a similar existing feature request instead of opening a new one.
* https://github.com/influxdata/influxdb-client-python/issues?utf8=%E2%9C%93&q=is%3Aissue+is%3Aopen+... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 82c701b..244bb58 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -2,6 +2,7 @@
### Features
1. [#536](https://github.com/influxdata/influxdb-client-python/pull/536): Query to `CSV` skip empty lines
+1. [#538](https://github.com/influxdata/influxdb-client-python/pull/538... |
influxdata__influxdb-client-python-559 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/write_api.py:WriteOptions.__init__",
"influxdb_client/client/write_api.py:WriteApi.__del__",
"influxdb_client/client/write_api.py:WriteApi._on_next"
],
... | influxdata/influxdb-client-python | a07fea6a3d8625ff327be9b824760978958f5246 | Exceptions in Callback Handlers can lead to deadlock
### Specifications
* Client Version: 1.3.6
* InfluxDB Version: 1.8.10 / 2.x
* Platform: Any
### Code sample to reproduce problem
Attaching repro script
[repro_lockup.py.gz](https://github.com/influxdata/influxdb-client-python/files/10700243/repro_lockup.py.... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 6708882..4e8da89 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,5 +1,8 @@
## 1.37.0 [unreleased]
+### Bug Fixes
+1. [#559](https://github.com/influxdata/influxdb-client-python/pull/559): Exceptions in callbacks can cause deadlocks
+
## 1.36.0 [2023-01-26]
### Fe... |
influxdata__influxdb-client-python-584 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/flux_csv_parser.py:FluxCsvParser._to_value"
],
"edited_modules": [
"influxdb_client/client/flux_csv_parser.py:FluxCsvParser"
]
},
"file": "influx... | influxdata/influxdb-client-python | 8fa51469385000dbb276295bce5c9efbd9357f4f | Missing entrys in bool column are replaced with "None" (DataFrame)
### Specifications
* Client Version: 1.35
* InfluxDB Version: 2.6
* Platform: Linux
### Code sample to reproduce problem
``` query = f'from(bucket: "{bucket}")\
|> range(start: {start_time}, stop: {end_time... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index c44f0a8..0838da5 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -2,7 +2,7 @@
### Breaking Changes
-This release disables using of the HTTP proxy environment variables `HTTP_PROXY` and `HTTPS_PROXY` for the asynchronous HTTP client.
+This release disables using of th... |
influxdata__influxdb-client-python-625 | [
{
"changes": {
"added_entities": [
"influxdb_client/client/write/point.py:Point.__eq__"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"influxdb_client/client/write/point.py:Point"
]
},
"file": "influxdb_client/client/write/poin... | influxdata/influxdb-client-python | 8286f454885ff7938c27d703e65e1287798f165e | `class Point` doesn't support equality comparison
### Specifications
* Client Version: influxdb-client==1.39.0
* InfluxDB Version: irrelevant
* Platform: windows
### Code sample to reproduce problem
```python
def test_point_equality():
point_a = (
Point("asd")
.tag("foo", "bar")
... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 23f7dc2..2f2cb4d 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,5 +1,8 @@
## 1.40.0 [unreleased]
+### Features
+1. [#625](https://github.com/influxdata/influxdb-client-python/pull/625): Make class `Point` equatable
+
### Bug Fixes
1. [#562](https://github.com/infl... |
influxdata__influxdb-client-python-631 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/_sync/rest.py:RESTClientObject.request"
],
"edited_modules": [
"influxdb_client/_sync/rest.py:RESTClientObject"
]
},
"file": "influxdb_client/_sync/rest... | influxdata/influxdb-client-python | d7181fab9612dd0558822fc40e5d9ccf5a15d56b | Ping throwing exception when DEBUG is True
### Specifications
* Client Version: influxdb-client-python/1.36.0
* InfluxDB Version: v2.7.1
* Platform: alpine-linux
### Code sample to reproduce problem
```python
from influxdb_client import InfluxDBClient
client = InfluxDBClient(url='http://localhost:8086',... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 2f2cb4d..6f11f45 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -5,6 +5,7 @@
### Bug Fixes
1. [#562](https://github.com/influxdata/influxdb-client-python/pull/562): Use `ThreadPoolScheduler` for `WriteApi`'s batch subject instead of `TimeoutScheduler` to prevent creat... |
influxdata__influxdb-client-python-648 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/write/dataframe_serializer.py:_not_nan",
"influxdb_client/client/write/dataframe_serializer.py:_any_not_nan",
"influxdb_client/client/write/dataframe_serializer.py... | influxdata/influxdb-client-python | a645ea99e0b518e78f112c5dee3fe81dfb31a2cd | WriteApi.write does not support pandas' nullable integer
### Specifications
* Client Version: 1.36.1
* InfluxDB Version: 2.7.0
* Platform: Mac
If you have a dataframe with Pandas' nullable integer as one of the column datatypes, and a row includes a `pd.NA` value, you get the following traceback:
```
Traceba... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 27fbe50..d4f8c92 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,5 +1,8 @@
## 1.42.0 [unreleased]
+### Bug Fixes
+1. [#648](https://github.com/influxdata/influxdb-client-python/pull/648): Fix `DataFrame` serialization with `NaN` values
+
## 1.41.0 [2024-03-01]
##... |
influxdata__influxdb-client-python-93 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"influxdb_client/client/influxdb_client.py:InfluxDBClient.__init__"
],
"edited_modules": [
"influxdb_client/client/influxdb_client.py:InfluxDBClient"
]
},
"file": "influ... | influxdata/influxdb-client-python | e68cf1a2030bc33c9619907227615adebe2070cc | trim trailing slash for urls
When using a url without a trailing slash, everything works fine:
`client = InfluxDBClient(url="https://us-west-2-1.aws.cloud2.influxdata.com", token=token, org=org, debug=True)`
But when adding a trailing slash to the url:
`client = InfluxDBClient(url="https://us-west-2-1.aws.cloud2... | diff --git a/CHANGELOG.md b/CHANGELOG.md
index 5122bb1..2bf8f08 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -6,6 +6,7 @@
### Bug Fixes
1. [#85](https://github.com/influxdata/influxdb-client-python/issues/85): Fixed a possibility to generate empty write batch
2. [#86](https://github.com/influxdata/influxdb-client... |
infobloxopen__infoblox-client-278 | [
{
"changes": {
"added_entities": [
"infoblox_client/connector.py:Connector.download_file",
"infoblox_client/connector.py:Connector.upload_file"
],
"added_modules": null,
"edited_entities": [
"infoblox_client/connector.py:Connector._log_request"
],
"edi... | infobloxopen/infoblox-client | 06e026d76e10d90625527086a0fdd5e077855152 | Missing required support for file upload and download on the fileop object
- OS - Mac OS X 11.2.1 (big sur)
- Python 3.9.2
- infoblox-client 0.5.0 (master)
There is currently no support for uploading files or downloading files when using the fileop object. For example, when calling uploadinit function on the Conne... | diff --git a/.gitignore b/.gitignore
index aeb75fc..b500602 100644
--- a/.gitignore
+++ b/.gitignore
@@ -57,3 +57,4 @@ docs/_build
Session.vim
.netrwhist
*~
+pyvenv.cfg
diff --git a/infoblox_client/connector.py b/infoblox_client/connector.py
index 2690e0a..4e3fb52 100644
--- a/infoblox_client/connector.py
+++ b/info... |
infobloxopen__infoblox-client-292 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"infoblox_client/connector.py:Connector.get_object",
"infoblox_client/connector.py:Connector._get_object"
],
"edited_modules": [
"infoblox_client/connector.py:Connector"
... | infobloxopen/infoblox-client | 2efaf4b92fb077af28a2f5e44b88b6083efaa084 | Unable to capture 500 errors
Hello,
currently, it seems not possible to distinguish 404 errors from 5XX using connector's `_get_object`.
https://github.com/infobloxopen/infoblox-client/blob/d3131bd32efbe101276279ce29cf4d7954e040c7/infoblox_client/connector.py#L341-L344
the connector threat all http error exactly ... | diff --git a/infoblox_client/connector.py b/infoblox_client/connector.py
index a2946b6..2e9928b 100644
--- a/infoblox_client/connector.py
+++ b/infoblox_client/connector.py
@@ -44,6 +44,8 @@ CLOUD_WAPI_MAJOR_VERSION = 2
def reraise_neutron_exception(func):
+ """This decorator catches third-party exceptions and ... |
infobloxopen__infoblox-client-295 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"infoblox_client/objects.py:Dhcpmember",
"infoblox_client/objects.py:NetworkV4",
"infoblox_client/objects.py:NetworkTemplateV4"
]
},
"file": "i... | infobloxopen/infoblox-client | b6af5306673744ee1de9285ef6b1cd90e0838f6e | _custom_field_processing bug in NetworkV4 fails to properly serialize members
High-level API call to NetworkV4 fails to serialize members properly. This has been confirmed on the infoblox-client 0.5.0, as well as, _master_. This was tested and confirmed on NIOS v8.5.3 and v8.5.4.
Steps to reproduce:
1. create a ... | diff --git a/infoblox_client/objects.py b/infoblox_client/objects.py
index 6ca7bd1..3c817b6 100644
--- a/infoblox_client/objects.py
+++ b/infoblox_client/objects.py
@@ -639,7 +639,7 @@ class Dhcpddns(SubObjects):
class Dhcpmember(SubObjects):
- _fields = ['ipv4addr', 'ipv6addr', 'name']
+ _fields = ['_struct... |
infobloxopen__infoblox-client-6 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"infoblox_client/object_manager.py:InfobloxObjectManager.create_dns_zone"
],
"edited_modules": [
"infoblox_client/object_manager.py:InfobloxObjectManager"
]
},
"file": "... | infobloxopen/infoblox-client | 3de58f527e14a03dcda5c537a1d82671a1aadb99 | Need to return Zone if it was created
Currentry None is returned from create_dns_zone:
https://github.com/infobloxopen/infoblox-client/blob/master/infoblox_client/object_manager.py#L249
Need to return created DnsZone object. | diff --git a/infoblox_client/object_manager.py b/infoblox_client/object_manager.py
index d61987c..3a19fdd 100644
--- a/infoblox_client/object_manager.py
+++ b/infoblox_client/object_manager.py
@@ -246,15 +246,15 @@ class InfobloxObjectManager(object):
zone_format=None, ns_group=None, prefix=Non... |
ingresso-group__pyticketswitch-70 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"pyticketswitch/client.py:Client.get_trolley",
"pyticketswitch/client.py:Client.make_reservation",
"pyticketswitch/client.py:Client.release_reservation"
],
"edited_modules": [... | ingresso-group/pyticketswitch | a22c4a3679174b1798acda89e59559930eb1f1a3 | missing "input_contained_unavailable_order" flag in trolley/reservation response
Currently when you attempt to add something to a trolley that is not available (sold out, performance in the past, max tickets per order exceeded, etc) it just appears as an empty trolley without any indication that something has gone wron... | diff --git a/pyticketswitch/client.py b/pyticketswitch/client.py
index 8b00be5..7726b43 100644
--- a/pyticketswitch/client.py
+++ b/pyticketswitch/client.py
@@ -1081,7 +1081,8 @@ class Client(object):
def get_trolley(self, token=None, number_of_seats=None, discounts=None,
seats=None, send_code... |
inhumantsar__python-ec2-reaper-15 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": null,
"edited_modules": null
},
"file": "ec2_reaper/aws_lambda.py"
}
] | inhumantsar/python-ec2-reaper | d4b0f08b945f95f550149482486c4301f87f3619 | lambda function doesn't honor the debug option properly
passed `DEBUG: false` as an env var but it still does NO-OPs and debug logging. the env var is probably being read by python in as a string. | diff --git a/ec2_reaper/aws_lambda.py b/ec2_reaper/aws_lambda.py
index e9fcdd2..e90645d 100644
--- a/ec2_reaper/aws_lambda.py
+++ b/ec2_reaper/aws_lambda.py
@@ -25,10 +25,15 @@ TAG_MATCHER = json.loads(TAG_MATCHER) if isinstance(TAG_MATCHER, strclasses) els
SLACK_ENDPOINT = os.environ.get('SLACK_ENDPOINT', None)
DE... |
inhumantsar__python-ec2-reaper-16 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"ec2_reaper/aws_lambda.py:_respond"
],
"edited_modules": [
"ec2_reaper/aws_lambda.py:_respond"
]
},
"file": "ec2_reaper/aws_lambda.py"
}
] | inhumantsar/python-ec2-reaper | d4b0f08b945f95f550149482486c4301f87f3619 | lambda return val isn't json serializable
datetimes cause lambda's return to fail. everything else still happens but the return code is always an error. | diff --git a/ec2_reaper/aws_lambda.py b/ec2_reaper/aws_lambda.py
index e9fcdd2..ff4f30b 100644
--- a/ec2_reaper/aws_lambda.py
+++ b/ec2_reaper/aws_lambda.py
@@ -25,10 +25,15 @@ TAG_MATCHER = json.loads(TAG_MATCHER) if isinstance(TAG_MATCHER, strclasses) els
SLACK_ENDPOINT = os.environ.get('SLACK_ENDPOINT', None)
DE... |
innolitics__hdat-16 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"hdat/hdat_cli.py:parse_arguments",
"hdat/hdat_cli.py:hdat_cli"
],
"edited_modules": [
"hdat/hdat_cli.py:parse_arguments",
"hdat/hdat_cli.py:hdat_cli"
]
},
... | innolitics/hdat | 3b3b8250e98a9ffe8bb583b7f7024c4d0cbc07bc | Find a way to avoid needing `.hdatsuites`
As usual, it would be good to write out your design here so we can discuss, before implementing. | diff --git a/README.md b/README.md
index 5714ec4..b296333 100644
--- a/README.md
+++ b/README.md
@@ -103,9 +103,9 @@ A casespec is a string that selects one or more test cases. A casespec may spec
Here are several casespecs along with the test cases they would select:
-- `` Selects all test cases in all suites.
-... |
instructlab__sdg-461 | [
{
"changes": {
"added_entities": [
"src/instructlab/sdg/blocks/llmblock.py:LLMMessagesBlock._gen_kwargs",
"src/instructlab/sdg/blocks/llmblock.py:LLMMessagesBlock._generate",
"src/instructlab/sdg/blocks/llmblock.py:LLMMessagesBlock.generate"
],
"added_modules": null,
... | instructlab/sdg | 02ccaefbb5469a37cb4f6d5dde8d7a96df87be48 | Finish syncing LLMMessagesBlock from research code
#409 Only brings in a stub of LLMMessagesBlock with the actual functionality commented out. We need to uncomment, adjust to fit our upstream conventions and params, and add tests for this block's intended functionality. | diff --git a/src/instructlab/sdg/blocks/llmblock.py b/src/instructlab/sdg/blocks/llmblock.py
index 89d9a27..b940954 100644
--- a/src/instructlab/sdg/blocks/llmblock.py
+++ b/src/instructlab/sdg/blocks/llmblock.py
@@ -457,48 +457,64 @@ class LLMLogProbBlock(LLMBlock):
# This is part of the public API.
@BlockRegistry... |
instructlab__sdg-484 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/instructlab/sdg/pipeline.py:Pipeline._generate_single"
],
"edited_modules": [
"src/instructlab/sdg/pipeline.py:Pipeline"
]
},
"file": "src/instructlab/sdg/pipeline.... | instructlab/sdg | a532a8d99ffe447152948e9442464923aba62637 | Configured `batch_size` not used to re-split output samples from each Pipeline Block
For Pipeline Blocks that potentially generate multiple output samples per input samples, we are not re-splitting those output samples based on the configured `batch_size`. For example, our full pipeline's `gen_knowledge` can generate p... | diff --git a/src/instructlab/sdg/pipeline.py b/src/instructlab/sdg/pipeline.py
index 59613a8..9c32464 100644
--- a/src/instructlab/sdg/pipeline.py
+++ b/src/instructlab/sdg/pipeline.py
@@ -187,7 +187,6 @@ class Pipeline:
def _generate_single(self, dataset) -> Dataset:
"""Generate a single dataset by runni... |
instructlab__sdg-493 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"src/instructlab/sdg/blocks/llmblock.py:ConditionalLLMBlock._format_prompt"
],
"edited_modules": [
"src/instructlab/sdg/blocks/llmblock.py:ConditionalLLMBlock"
]
},
"fil... | instructlab/sdg | 8191c2a8a7e1e165d252df0f7011e12905df9506 | ConditionalLLMBlock not working with Jinja templates
We had a user discover that during the Jinja template transition we missed updating `ConditionalLLMBlock` to use Jinja templates. So, we need to fix that as well as plug the hole in our test coverage to ensure ConditionalLLMBlock works as well. What happens is we hav... | diff --git a/src/instructlab/sdg/blocks/llmblock.py b/src/instructlab/sdg/blocks/llmblock.py
index b940954..3350a77 100644
--- a/src/instructlab/sdg/blocks/llmblock.py
+++ b/src/instructlab/sdg/blocks/llmblock.py
@@ -323,14 +323,15 @@ class ConditionalLLMBlock(LLMBlock):
)
def _format_prompt(sel... |
int-brain-lab__ibllib-777 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"brainbox/processing.py:bincount2D"
],
"edited_modules": [
"brainbox/processing.py:bincount2D"
]
},
"file": "brainbox/processing.py"
},
{
"changes": {
"add... | int-brain-lab/ibllib | db14a3e9ca15ae7a8cb9fb034f8488aa20704a36 | Add support for multi depth FOV sessions | diff --git a/brainbox/processing.py b/brainbox/processing.py
index a20cb122..79b769ab 100644
--- a/brainbox/processing.py
+++ b/brainbox/processing.py
@@ -1,17 +1,16 @@
-'''
-Processes data from one form into another, e.g. taking spike times and binning them into
-non-overlapping bins and convolving spike times with a ... |
int-brain-lab__ibllib-787 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"ibllib/io/extractors/mesoscope.py:MesoscopeSyncTimeline.get_timeshifts"
],
"edited_modules": [
"ibllib/io/extractors/mesoscope.py:MesoscopeSyncTimeline"
]
},
"file": "i... | int-brain-lab/ibllib | 73c912ef85099b711753310bca3bf2771f77e433 | mesoscope extractor expects nr of FOVs == nr or ROIs in raw SI tif
For multi-depth imaging, the nr of FOVs we define in the metadata (one per unique scanfield*depth) is not equal to the nr of 'enabled' ROIs in the header of the scanimage tifs (one per unique scanfield). However, the mesoscope extractor currently assert... | diff --git a/ibllib/io/extractors/mesoscope.py b/ibllib/io/extractors/mesoscope.py
index ade22240..8754869a 100644
--- a/ibllib/io/extractors/mesoscope.py
+++ b/ibllib/io/extractors/mesoscope.py
@@ -746,6 +746,15 @@ class MesoscopeSyncTimeline(extractors_base.BaseExtractor):
Calculate the time shifts for each ... |
int-brain-lab__ibllib-868 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"ibllib/pipes/mesoscope_tasks.py:MesoscopePreprocess._consolidate_exptQC"
],
"edited_modules": [
"ibllib/pipes/mesoscope_tasks.py:MesoscopePreprocess"
]
},
"file": "ibll... | int-brain-lab/ibllib | 136978f4e550fe2d1470f3074d4591e03b4b0ff2 | Support mixed enums in MesoscopePreprocess._consolidate_exptQC
Currently `MesoscopePreprocess._consolidate_exptQC` will raise if the exptQC.mat files have a different enumeration. This is unnecessary as the enumerations are entirely independent for each bout and a new hybrid enumeration can be generated instead of rais... | diff --git a/ibllib/pipes/mesoscope_tasks.py b/ibllib/pipes/mesoscope_tasks.py
index 427086b8..2547bdc9 100644
--- a/ibllib/pipes/mesoscope_tasks.py
+++ b/ibllib/pipes/mesoscope_tasks.py
@@ -486,23 +486,42 @@ class MesoscopePreprocess(base_tasks.MesoscopeTask):
numpy.array
An array of frame indice... |
intake__intake-439 | [
{
"changes": {
"added_entities": null,
"added_modules": null,
"edited_entities": [
"intake/source/base.py:DataSource.persist"
],
"edited_modules": [
"intake/source/base.py:DataSource"
]
},
"file": "intake/source/base.py"
}
] | intake/intake | aa83ccd41ed32f90f6bef5dbbe0e8a9e67c6d781 | persist ttl argument should check that it's an int.
I just tried to use persist for the first time and passed a file name to the `ttl` argument (don't ask me why but I kind of thought `ttl` might be a terrible abbreviation of title). Passing a string to ttl did not through an error, but when I try to call `is_persisted... | diff --git a/intake/source/base.py b/intake/source/base.py
index f3abbbb..79fc62e 100644
--- a/intake/source/base.py
+++ b/intake/source/base.py
@@ -259,13 +259,26 @@ class DataSource(DictSerialiseMixin):
return self.plot
def persist(self, ttl=None, **kwargs):
- """Save data from this source to l... |
intake__intake-457 | [
{
"changes": {
"added_entities": [
"intake/catalog/base.py:Catalog.__len__"
],
"added_modules": null,
"edited_entities": null,
"edited_modules": [
"intake/catalog/base.py:Catalog"
]
},
"file": "intake/catalog/base.py"
}
] | intake/intake | 34dd38089ccb805759508659b5e8475034df2f0c | Implement __len__ on Catalog class?
Catalog types almost meet the requirements for a [Collection](https://docs.python.org/3.8/library/collections.abc.html). They implement `__iter__` and `__contains__`. But not `__len__`. If we implement `__len__`, then a `Catalog` will be a valid `Collection`.
My specific applica... | diff --git a/intake/catalog/base.py b/intake/catalog/base.py
index a482bd1..34c2e7c 100644
--- a/intake/catalog/base.py
+++ b/intake/catalog/base.py
@@ -306,6 +306,9 @@ class Catalog(DataSource):
"""Return an iterator over catalog entries."""
return iter(self._get_entries())
+ def __len__(self):
... |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.