|
|
--- |
|
|
license: cc-by-nc-4.0 |
|
|
task_categories: |
|
|
- text-classification |
|
|
language: |
|
|
- en |
|
|
tags: |
|
|
- medical |
|
|
- drug-drug-interaction |
|
|
- pharmacology |
|
|
- clinical |
|
|
- ddi |
|
|
size_categories: |
|
|
- 1K<n<10K |
|
|
--- |
|
|
|
|
|
# DDI Corpus Processed |
|
|
|
|
|
Drug-Drug Interaction (DDI) detection dataset processed from the [SemEval-2013 DDI Corpus](https://github.com/isegura/DDICorpus). |
|
|
|
|
|
## Dataset Description |
|
|
|
|
|
This dataset contains drug-drug interaction examples for 5-class classification: |
|
|
|
|
|
- **MECHANISM**: Mechanistic description of how drugs interact (e.g., inhibition, induction) |
|
|
- **EFFECT**: Clinical effect of concurrent use (e.g., increased toxicity, decreased efficacy) |
|
|
- **ADVISE**: Advisory or cautionary information about concurrent use |
|
|
- **INT**: General interaction without specific type |
|
|
- **NONE**: No interaction between the drug pair |
|
|
|
|
|
## Dataset Statistics |
|
|
|
|
|
| Split | Total | MECHANISM | EFFECT | ADVISE | INT | NONE | |
|
|
|-------|-------|-----------|--------|--------|-----|------| |
|
|
| Train | 5,744 | 1,319 (23%) | 1,687 (29%) | 826 (14%) | 189 (3%) | 1,723 (30%) | |
|
|
| Test | 1,398 | 302 (22%) | 360 (26%) | 221 (16%) | 96 (7%) | 419 (30%) | |
|
|
|
|
|
## Data Format |
|
|
|
|
|
Each example contains: |
|
|
- `sentence`: The original sentence containing drug mentions |
|
|
- `drug1`: First drug entity |
|
|
- `drug2`: Second drug entity |
|
|
- `relation`: Interaction type (MECHANISM, EFFECT, ADVISE, INT, or NONE) |
|
|
- `source_file`: Original XML source file |
|
|
- `sentence_id`: Original sentence ID |
|
|
- `pair_id`: Original pair ID |
|
|
|
|
|
## Usage |
|
|
|
|
|
```python |
|
|
from datasets import load_dataset |
|
|
|
|
|
dataset = load_dataset("MaziyarPanahi/DDI-Corpus-Processed") |
|
|
``` |
|
|
|
|
|
## Citation |
|
|
|
|
|
If you use this dataset, please cite: |
|
|
|
|
|
```bibtex |
|
|
@article{herrero2013ddi, |
|
|
title={The DDI corpus: An annotated corpus with pharmacological substances and drug--drug interactions}, |
|
|
author={Herrero-Zazo, Mar{\'\i}a and Segura-Bedmar, Isabel and Mart{\'\i}nez, Paloma and Declerck, Thierry}, |
|
|
journal={Journal of Biomedical Informatics}, |
|
|
volume={46}, |
|
|
number={5}, |
|
|
pages={914--920}, |
|
|
year={2013} |
|
|
} |
|
|
``` |
|
|
|
|
|
## License |
|
|
|
|
|
CC BY-NC 4.0 (following original DDI Corpus license) |
|
|
|
