Datasets:

OpenMed
/

pgc-other

CHR int64	SNP string	BP int64	A1 string	A2 string	FRQ_A_12339 float64	FRQ_U_1041717 float64	INFO float64	OR float64	SE float64	P float64	ngt int64	Direction string	HetISqt float64	HetDf int64	HetPVa float64	Nca int64	Nco int64	Neff_half float64	_source_file string
1	rs960326	207,014,776	T	C	0.905	0.898	0.992	0.999795	0.0241	0.7966	0	--++----+-+--++	0	14	0.8507	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs4396169	205,768,309	C	T	0.714	0.722	0.998	1.000022	0.0157	0.8963	0	++-+-++-++++-+-	51	14	0.01203	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs1829998	201,273,456	T	C	0.9	0.9	0.997	0.999999	0.0238	0.7529	6	?+++-++---+++-+	0	13	0.9213	12,024	1,038,567	21,044.53	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs10863860	206,983,365	T	C	0.702	0.69	0.996	1.000062	0.0155	0.9852	0	-++--+++--+--++	0	14	0.4875	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2064148	209,909,385	A	G	0.749	0.742	0.998	1.000027	0.0166	0.9859	0	?++-+---------+	42.1	13	0.04859	12,024	1,038,567	21,044.53	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs609391	201,564,909	C	T	0.803	0.797	0.998	0.999879	0.018	0.8372	8	++-+--+-+---+--	0	14	0.7239	12,190	1,038,737	21,333.45	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2808489	200,286,485	T	C	0.688	0.693	0.995	1.000022	0.0157	0.1804	5	---++--+-++-+++	0	14	0.4786	12,190	1,038,737	21,333.45	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2281845	201,081,943	C	T	0.596	0.596	0.996	0.999963	0.0146	0.6913	16	++---+--++-++--	32.5	14	0.1088	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs4240828	209,188,309	C	A	0.61	0.615	0.999	1.000068	0.0145	0.1571	2	--++--++-+-+-+-	0	14	0.6931	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs4393158	209,851,897	G	A	0.935	0.935	0.985	1.000033	0.0292	0.9219	2	?--+-++-+-+--++	17.2	13	0.2662	12,024	1,038,567	21,044.53	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs11120575	206,626,607	G	A	0.504	0.505	0.998	1.00003	0.0142	0.1133	11	+++++-+--+-++-+	0	14	0.5857	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs7527336	208,642,105	C	T	0.914	0.913	0.98	0.999963	0.0265	0.6457	1	?++-+-+--+++---	0	13	0.4821	11,875	1,035,587	20,760.72	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6684392	208,677,189	A	G	0.578	0.571	0.998	1.000366	0.0144	0.02812	0	-+++++++++-++-+	0	14	0.7333	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs12038475	200,740,278	G	T	0.917	0.929	0.996	0.999874	0.0257	0.546	0	-++++--+---+-++	0	14	0.5968	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs12751143	206,625,223	T	C	0.792	0.794	0.999	1.000047	0.0172	0.7853	0	+-++-+-+++-++++	5.1	14	0.3955	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2782524	204,656,803	C	A	0.792	0.796	0.993	1.000144	0.0179	0.05888	3	--+--++--+--+-+	50.1	14	0.01406	12,190	1,038,737	21,333.45	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs4951064	204,281,004	C	T	0.557	0.557	0.996	0.999928	0.0151	0.2832	1	+-+-+?+++-+++++	0	13	0.7376	10,863	1,032,034	19,118.04	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs1000352	209,675,578	T	C	0.906	0.905	0.999	0.999931	0.0242	0.4925	0	+---+----+-+++-	32.2	14	0.1111	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs10800745	200,849,676	A	G	0.878	0.892	0.996	1.000052	0.0215	0.7001	4	+-++++--++--+--	0	14	0.9222	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs1819291	201,385,061	C	T	0.878	0.871	0.99	1.000196	0.0216	0.2692	11	+----+--++-+---	0	14	0.5923	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs12035141	209,079,136	T	G	0.901	0.901	0.992	0.999903	0.0244	0.5024	0	-++++----+++---	0.6	14	0.4435	12,190	1,038,737	21,333.45	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2993447	202,248,554	A	G	0.484	0.477	0.998	0.999999	0.0147	0.08182	2	--+--?+-++----+	0	13	0.7042	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2810643	203,924,819	G	A	0.639	0.646	0.998	0.999998	0.0149	0.215	0	-++-+++--+-+-+-	0	14	0.6043	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs11240544	205,615,442	T	C	0.651	0.645	0.996	1.000018	0.0151	0.696	0	?++--+---+-++--	0	13	0.8803	12,024	1,038,567	21,044.53	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs7418638	206,671,796	C	T	0.553	0.545	0.995	1.000053	0.0147	0.5426	2	+-+-+?-----+++-	0	13	0.8061	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6427850	200,672,410	T	G	0.54	0.536	0.994	1.000095	0.0142	0.4527	3	+++-+---++-++--	0.8	14	0.4415	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs11799553	209,310,911	G	A	0.626	0.606	0.991	1.000068	0.0154	0.03293	0	+--+-?++++--++-	8.3	13	0.3617	10,863	1,032,034	19,118.04	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2843170	209,456,703	C	T	0.73	0.721	0.995	1.000046	0.0167	0.2962	11	++--+?--+++++-+	0	13	0.8875	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs4844698	208,773,517	T	C	0.559	0.568	0.994	0.999973	0.0146	0.4298	0	+----+++++--+--	0	14	0.5042	12,190	1,038,737	21,333.45	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6690037	207,263,829	A	G	0.491	0.484	0.984	0.999924	0.0148	0.726	11	---++?+++-++--+	0	13	0.8029	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6696091	203,837,577	G	T	0.64	0.639	0.998	0.999772	0.0147	0.1232	8	++-+-+++-+-++++	31.6	14	0.1164	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs7545125	207,424,727	G	A	0.709	0.702	0.999	1.000024	0.0158	0.4548	0	++-+++-+-+++--+	0	14	0.8463	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs3927459	207,883,907	G	T	0.533	0.533	0.992	1.000049	0.0144	0.8848	0	?-+--++++--+--+	0	13	0.9327	12,024	1,038,567	21,044.53	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs12123211	202,944,639	A	G	0.682	0.688	0.994	1.000006	0.0153	0.6018	11	-++++---+----+-	0	14	0.7556	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2745955	208,064,341	G	A	0.706	0.71	0.995	1.000065	0.0158	0.4241	0	+++-------++--+	0	14	0.472	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6693481	203,766,395	C	T	0.676	0.663	0.996	0.999949	0.0151	0.992	2	++-+--+-+--+++-	26.4	14	0.1646	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs677715	208,047,284	G	A	0.607	0.599	0.999	0.999775	0.0146	0.09993	0	++++++++++--++-	0	14	0.6474	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6698441	202,652,939	C	T	0.692	0.688	0.988	1.000186	0.0162	0.1806	11	+---+?----+--+-	0	13	0.9262	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs7529849	201,561,117	C	T	0.925	0.929	0.998	0.99987	0.0267	0.341	1	--+-+--+--+++++	52.6	14	0.008844	12,190	1,038,737	21,333.45	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs7413575	204,788,772	T	C	0.879	0.876	0.997	1.000006	0.0218	0.1901	4	?+++++++++-+---	0.1	13	0.4463	12,024	1,038,567	21,044.53	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2153715	201,314,624	G	A	0.741	0.743	0.997	1.000103	0.0163	0.4928	0	-+--+-+---+++--	0	14	0.7608	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs1652333	207,470,460	A	G	0.709	0.702	0.999	0.999964	0.0158	0.3889	4	--+---+-+---++-	0	14	0.8763	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs1429904	207,461,884	A	C	0.726	0.718	0.999	1.000056	0.0158	0.1422	0	+++0+---+--++-+	6.7	14	0.3778	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs10900433	204,884,871	G	A	0.813	0.814	0.996	0.999991	0.0182	0.4483	0	--+-++-+----+--	0	14	0.7469	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs12087811	205,303,766	C	T	0.707	0.699	0.999	0.999895	0.0156	0.1753	0	-+++0+-+-++++-+	0	14	0.6827	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2292099	200,844,340	T	G	0.904	0.908	0.993	0.999916	0.0242	0.4233	11	-+-+-+++-++-+++	1.8	14	0.4309	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs15672	206,669,958	G	A	0.557	0.549	0.997	1.000105	0.0149	0.4816	2	+-+-+?-----+++-	0	13	0.8299	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs4245724	204,216,762	T	C	0.663	0.653	0.998	1.000054	0.0157	0.1834	0	-+-++?++++++---	0	13	0.8344	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs10494847	203,819,440	A	C	0.88	0.874	0.998	0.999898	0.022	0.5235	2	-+-+0+++-+---++	0	14	0.4746	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6673562	202,652,491	A	G	0.691	0.685	0.988	1.000081	0.0162	0.1949	0	-+++-?++++-++-+	0	13	0.9095	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6702219	203,850,090	A	G	0.526	0.52	0.998	0.999992	0.0141	0.2121	5	----+--+--+---+	24.3	14	0.1853	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs10919876	200,247,025	T	C	0.729	0.733	0.995	1.000029	0.016	0.1068	6	-+--+-++++-++--	42.8	14	0.03999	12,190	1,038,737	21,333.45	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs509501	207,604,663	C	T	0.713	0.705	0.998	0.999937	0.0158	0.2401	0	+++-+---+----++	0	14	0.8998	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs1933570	208,929,589	T	C	0.853	0.855	0.999	0.999979	0.0198	0.2333	0	-++-++---+++---	3.5	14	0.4123	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs4265490	204,265,584	C	A	0.725	0.722	0.994	1.00007	0.0165	0.8337	5	+---+?+++-+++--	0	13	0.6344	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs3767511	201,052,199	T	C	0.781	0.785	0.993	0.999972	0.0171	0.9919	9	-+++-+-+-+++-+-	0	14	0.8873	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs12047943	209,082,762	C	T	0.9	0.901	0.993	0.999833	0.0241	0.3901	0	+----++++---+++	13	14	0.3073	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs1626370	201,288,955	G	A	0.798	0.785	0.999	0.999985	0.0177	0.6191	5	-+--+-+-+-++---	0	14	0.7607	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6667532	204,948,659	A	G	0.901	0.901	1	1.000047	0.0244	0.2736	5	+-?-+++++-+---+	0	13	0.9302	12,045	782,105	21,029.93	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6689572	208,940,942	G	A	0.907	0.909	0.997	0.999818	0.0249	0.05067	5	+++--++-+---+-+	0	14	0.493	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6540543	209,749,556	C	T	0.805	0.801	0.989	1.000028	0.0182	0.8225	0	?+--++--++-----	17.1	13	0.2671	11,875	1,035,587	20,760.72	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs7512320	209,657,768	C	A	0.881	0.88	0.999	0.999949	0.0221	0.1623	0	-+++-++++---+-+	41.5	14	0.0469	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs17405517	204,264,047	G	A	0.725	0.722	0.994	1.000015	0.0165	0.8372	2	+---+?+++-+++--	0	13	0.6266	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs1781030	208,424,205	T	C	0.542	0.549	0.987	0.99994	0.0144	0.03033	3	-0--------++-+-	0	14	0.9652	12,190	1,038,737	21,333.45	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6667578	204,626,549	C	T	0.507	0.5	0.996	0.999962	0.0143	0.4883	3	-+-+-+---+++++-	0	14	0.7629	12,190	1,038,737	21,333.45	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs11118979	208,229,228	T	G	0.774	0.762	0.999	1.000388	0.0169	0.07436	0	+++-++-+--++++-	0	14	0.9817	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs9430148	206,636,715	G	A	0.941	0.94	0.993	1.00002	0.0318	0.7181	2	?--+-++-++--+-+	41.1	13	0.05454	12,024	1,038,567	21,044.53	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs11579421	205,607,227	T	C	0.651	0.644	0.996	1.000008	0.0149	0.901	11	+++--+---+-++--	0	14	0.8803	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs1517810	201,850,057	T	C	0.682	0.678	0.999	0.999815	0.0153	0.06633	7	+-++-+-+--+----	0	14	0.5613	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs10863704	208,382,156	C	T	0.704	0.713	0.993	0.999926	0.0156	0.06912	11	-+++++-+++-+--+	0	14	0.8617	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs12021556	200,436,428	A	G	0.914	0.918	0.996	0.999974	0.0254	0.4487	0	+--++++---+-++-	0	14	0.6406	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs16849387	201,813,951	A	G	0.78	0.769	0.998	0.999914	0.0175	0.8385	0	+--++?--++-+-+-	0	13	0.9914	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2250377	201,860,626	G	A	0.679	0.678	0.999	0.999951	0.0153	0.09815	11	-+--+-+-++-++-+	0	14	0.5025	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs12567990	207,681,685	C	T	0.813	0.811	0.996	1.000066	0.0183	0.5186	0	-+-+---+++-+-++	0	14	0.5294	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs4951360	204,293,242	G	A	0.736	0.736	0.994	1.000185	0.0166	0.3072	0	-+-+-?+------++	12.3	13	0.3183	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs1028402	209,636,670	C	T	0.793	0.796	0.999	1.000011	0.0175	0.0763	0	-+-++-++++--+-+	25.5	14	0.1727	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs11118982	208,263,980	G	A	0.54	0.541	0.998	0.999982	0.0142	0.08964	0	+-+-+++++-++--+	19.6	14	0.2346	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs3820425	201,117,946	C	T	0.78	0.778	0.999	1.000426	0.0173	0.05494	0	+---+--+----+-+	28.5	14	0.1435	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs11240358	205,070,573	G	A	0.613	0.602	1	0.999852	0.0147	0.3714	7	-+--+-++------+	0	14	0.4619	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6701064	202,093,735	G	T	0.542	0.543	0.994	1.000072	0.0143	0.4465	16	+++-+-+-+-+----	9.2	14	0.3504	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs12724599	202,045,541	C	T	0.706	0.709	0.995	1.000031	0.0157	0.4309	11	-+-----+++-+-++	25.8	14	0.1699	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs10863745	209,184,218	G	A	0.606	0.61	0.999	1.000193	0.0145	0.1479	0	--++--+--+-+-+-	0	14	0.6263	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs11240512	205,512,917	G	A	0.68	0.672	1	1.000078	0.0158	0.8692	0	++++-?--++--+--	0	13	0.5968	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs627670	209,929,299	A	G	0.756	0.747	0.997	1.000029	0.0163	0.7305	0	++-++--++-----+	41.8	14	0.04537	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs11803397	208,929,786	A	C	0.898	0.897	0.999	1.00003	0.0234	0.738	0	-+---+--+--+-++	36.6	14	0.07661	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs7526243	209,162,503	G	A	0.858	0.861	0.998	0.999868	0.0203	0.7587	0	--+--++-+++--+-	47	14	0.0228	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs1970530	207,924,066	A	G	0.581	0.563	0.999	0.999988	0.0145	0.9233	2	?--+++----+--++	0	13	0.9875	12,024	1,038,567	21,044.53	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2243170	207,009,910	C	T	0.905	0.898	0.993	1.000114	0.0241	0.763	5	++--++++-+-++--	0	14	0.8576	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6668272	204,885,484	G	A	0.813	0.814	0.996	1.000024	0.0182	0.4402	0	--+-++-+----+--	0	14	0.7297	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs880878	203,435,718	A	G	0.797	0.795	0.998	0.999938	0.0175	0.1824	5	+-------+-++--+	13	14	0.3082	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs7530576	200,630,818	C	A	0.927	0.929	0.999	0.999789	0.0266	0.3646	0	-+++++--+++++--	0	14	0.8074	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs6593899	204,716,535	G	T	0.617	0.627	0.979	0.999914	0.0152	0.11	0	+++-++++?-+---+	0	13	0.7552	11,953	1,033,987	20,881.98	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2275737	202,920,300	C	A	0.559	0.562	0.999	1.000017	0.0142	0.717	5	+---++++-+++-+-	39.3	14	0.05937	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs12410558	208,366,991	C	T	0.835	0.841	0.997	1.00004	0.0193	0.07157	0	--++--+++-+----	0	14	0.67	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs10900472	205,181,526	C	T	0.59	0.592	1	1.000025	0.0144	0.8262	5	+-+-+-+-++-+-+-	4	14	0.4069	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs12028423	202,187,960	G	A	0.568	0.573	0.998	0.999372	0.0148	0.001861	0	+++++?-++-+++--	0	13	0.5094	11,012	1,035,014	19,401.85	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2952	208,049,077	T	C	0.607	0.599	0.999	0.999899	0.0146	0.09876	11	----------++--+	0	14	0.6466	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs7548249	208,719,848	C	T	0.566	0.564	0.999	0.999892	0.0142	0.4221	11	+++-+--+-+-++-+	3.7	14	0.4106	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs2483061	206,622,996	G	A	0.785	0.783	0.999	1.000039	0.0176	0.1226	0	?-++-+-++-++-+-	23.9	13	0.1951	12,024	1,038,567	21,044.53	PGS_prsCS_bpd15_2024_all_autos_24b.gz
1	rs4511151	200,435,809	A	G	0.914	0.918	0.996	1.000061	0.0254	0.4602	0	+--++++---+-++-	0	14	0.6294	12,339	1,041,717	21,617.26	PGS_prsCS_bpd15_2024_all_autos_24b.gz

End of preview. Expand in Data Studio

PGC Other Psychiatric Conditions — GWAS Summary Statistics

Dataset Description

Genome-wide association study (GWAS) summary statistics for Other Psychiatric Conditions phenotypes from the Psychiatric Genomics Consortium (PGC).

This dataset contains multiple GWAS publications as separate subsets (configs). Each can be loaded independently.

Usage

from datasets import load_dataset

# Load a specific GWAS (e.g., bpd2025)
ds = load_dataset("OpenMed/pgc-other", "bpd2025")
print(ds)

Available Configs

from datasets import get_dataset_config_names
configs = get_dataset_config_names("OpenMed/pgc-other")
print(configs)

Subsets (Publications)

Config	Phenotype	Journal	Year	PubMed	Rows	License
`bpd2025`	Borderline Personality Disorder	Nature Genetics	2025	Pending	30,901,961	CC BY 4.0
`ciac`	Clozapine-Induced Agranulocytosis	Nature Communications	2014	25187353	—	CC BY 4.0

Data Format

All data has been converted to Apache Parquet format with shards of 10,000 rows. Common columns include:

Column	Description
`SNP` / `ID`	SNP rsID or variant identifier
`CHR`	Chromosome
`BP` / `POS`	Base-pair position (typically GRCh37/hg19)
`A1` / `ALT`	Effect allele
`A2` / `REF`	Non-effect (reference) allele
`OR` / `BETA`	Odds ratio or effect size
`SE`	Standard error
`P`	P-value
`INFO`	Imputation quality score
`FRQ` / `MAF`	Allele frequency
`_source_file`	Original source filename

Note: Column names vary between publications. The _source_file column tracks the original file each row came from.

Citation

When using any subset, please cite:

The original publication (see PubMed links above)
The data DOI from Figshare (see supplementary metadata)
Acknowledge the PGC:

"Data were obtained from the Psychiatric Genomics Consortium — https://pgc.unc.edu/"