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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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import { Component, ElementRef, OnDestroy, SecurityContext, TemplateRef, ViewChild, } from "@angular/core"; import { combineLatest, fromEvent, Subscription } from "rxjs"; import { QuickTourService } from "../quickTour.service"; import { debounceTime, map, shareReplay } from "rxjs/operators"; import { DomSan...
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import { create as bufCreate, type DescMessage, type MessageShape, toBinary as bufToBinary, } from '@bufbuild/protobuf'; import { AnySchema, timestampNow } from '@bufbuild/protobuf/wkt'; import { v4 as uuidv4 } from 'uuid'; import aboutProto from '../proto/about.json'; import { type VortexMessage, type Vor...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * @file Distance Representation * @author Alexander Rose <alexander.rose@weirdbyte.de> * @author Fred Ludlow <fred.ludlow@gmail.com> * @private */ import { Color } from 'three' import { RepresentationRegistry } from '../globals' import { defaults } from '../utils' import { DistancePicker } from '../utils/pic...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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import { SVGTransformUtils } from "../utils/SVGTransformUtils"; import { SVGPathUtils } from "../utils/SVGPathUtils"; import { type BoundingBox, BoundingBoxUtils } from "../utils/BoundingBoxUtils"; import { TWO_FRAMES_TIMEOUT } from "libs/editor/tests/integration/e2e/utils/constants"; class TimeSeriesHelper { privat...
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import { Destructable } from "../Common/Destructable"; import type { Waveform } from "../Waveform"; import { WaveformAudio, type WaveformAudioOptions } from "./WaveformAudio"; export type Options = { src: string; }; type MediaResponse = ArrayBuffer | null; export class MediaLoader extends Destructable { private ...
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/** * @file Ball And Stick Representation * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { defaults } from '../utils' import { ExtensionFragDepth, RepresentationRegistry } from '../globals' import StructureRepresentation, { StructureRepresentationParameters, StructureRepresentationData...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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import { test } from 'node:test'; import assert from 'node:assert/strict'; import { createRequire } from 'node:module'; import { classifySignals, diagnostics, decide, isExemptAuthor, parseOwners, findPullRequest, pickStepGuidance, targetsDefaultBranch } from '../classify.ts'; import type { CheckRun, Config, SignalState...
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/** * @file Charged * @author Alexander Rose <alexander.rose@weirdbyte.de> * @author Fred Ludlow <Fred.Ludlow@astx.com> */ import { Vector3 } from 'three' import { defaults } from '../../utils' import { radToDeg } from '../../math/math-utils' import Structure from '../../structure/structure' import { AA3, Bases, ...
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import { SerializedTraceData, TraceData } from '../../core/entities/trace_data'; import { TraceInfo } from '../../core/entities/trace_info'; import { JSONBig } from '../../core/utils/json'; import { GetCredentialsForTraceDataDownload, GetCredentialsForTraceDataUpload } from '../spec'; import { makeRequest } from '../ut...
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/** * TypeScript interfaces for the agreement dashboard API response and UI state. * * Mirrors the data contract from the design doc (§14) and the backend * dataclasses in dimensions.pipeline.types. */ // --------------------------------------------------------------------------- // API Response Types // --------...
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import { existsSync, mkdirSync, mkdtempSync, readFileSync, rmSync, writeFileSync } from 'node:fs'; import { tmpdir } from 'node:os'; import { join } from 'node:path'; import { createInterface } from 'node:readline'; import { runSetup } from '../src/commands/setup'; import { selectPrompt } from '../src/ui-select'; jes...
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import { ComputationWorkerQueue } from "./ComputationWorkerQueue"; // Priority levels for computation tasks export enum TaskPriority { HIGH = "high", NORMAL = "normal", LOW = "low", } // Interface for progress details per priority level export interface PriorityProgress { queued: number; active: number; p...
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// biome-ignore-all lint/correctness/noUnusedPrivateClassMembers: AudioUltra; skip unsafe removal import type { Layer } from "../Layer"; import { averageMinMax, clamp } from "../../Common/Utils"; import type { Renderer, RenderContext } from "./Renderer"; import type { WaveformAudio } from "../../Media/WaveformAudio"; i...
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/** * @file Structure * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { Vector3, Box3 } from 'three'; import { Signal } from 'signals'; import { CifBlock } from 'molstar/lib/mol-io/reader/cif'; import BitArray from '../utils/bitarray'; import PrincipalAxes from '../math/principal-axes'; ...
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/** * Utility functions for the agreement dashboard. * * All functions are pure (no side-effects) and operate on the types * defined in ./types.ts. */ import type { AggregationResult, AgreementMethod, DimensionInfo, DimensionMeta, DimensionScore, MajorityVoteResult, TaskAgreementResult, } from "./ty...
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import TriggerOptions = Cypress.TriggerOptions; import ObjectLike = Cypress.ObjectLike; import ClickOptions = Cypress.ClickOptions; type MouseInteractionOptions = Partial<TriggerOptions & ObjectLike & MouseEvent>; export const ImageView = { get image() { cy.log("Get main image"); return cy.get("img[alt=imag...
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/** * @file Picking Proxy * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { Vector3, Matrix4, Vector2 } from 'three' import Stage from '../stage/stage' import StructureComponent from '../component/structure-component' import MouseObserver from '../stage/mouse-observer' import { Picker ...
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/** * @file Line Representation * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { defaults } from '../utils' import { RepresentationRegistry } from '../globals' import StructureRepresentation, { StructureRepresentationParameters, StructureRepresentationData } from './structure-represent...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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import Dagre from '@dagrejs/dagre'; import { type Edge, type Node as ReactFlowNode, Position } from '@xyflow/react'; // these correspond to GraphLabel options in dagre export interface LayoutOptions { /** Direction of the graph layout */ rankdir?: 'TB' | 'LR'; /** Vertical spacing between ranks */ ranksep?: nu...
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/** * @file Surface Utils * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { degToRad } from '../math/math-utils' import { m4new, m4multiply, m4makeTranslation, m4makeScale, m4makeRotationY } from '../math/matrix-utils' import { v3addScalar, v3subScalar, v3divideScalar, v3multiplySca...
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/** * `mlflow-codex setup` — interactively register the notify hook in the user's * Codex config and write an MLflow tracing config alongside it. * * Writes: * - `config.toml` — prepends `notify = ["mlflow-codex", "notify-hook"]` * ahead of any `[section]` headers. Refuses to modify a pre-existing * `n...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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import { beforeEach, describe, expect, it } from "bun:test"; import { DEFAULT_HOTKEYS, HOTKEY_SECTIONS } from "./defaults"; import { clearDynamicHotkeySections, getDynamicHotkeys, getDynamicSections, getHotkeySections, getTypedDefaultHotkeys, } from "./utils"; import { extractBespokeHotkeys, syncProjectInterf...
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import { z } from "zod"; import type { FieldDefinition, MessageDefinition, ProviderConfig, VisibleWhen } from "./common"; // Re-export ProviderConfig for convenience export type { ProviderConfig }; /** * Check if a visibleWhen / requiredWhen condition matches the current form data. */ export function matchesWhen(wh...
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/** * Constrains a point to stay within the specified bounds * @param point - The point to constrain * @param bounds - The bounds {width, height} * @returns The constrained point */ export function constrainPointToBounds( point: { x: number; y: number }, bounds: { width: number; height: number }, ): { x: numbe...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * @file Viewer Utils * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { Vector2, Vector3, Matrix4, Points, Scene, Camera, Object3D, WebGLRenderer, Color } from 'three' import { createParams } from '../utils' import TiledRenderer from './tiled-renderer' import { quicksortCmp } fr...
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import path from 'path'; import os from 'os'; import { initializeSDK } from './provider'; import { AuthProvider, createAuthProvider, isDatabricksUri } from '../auth'; /** * User-facing shape for specifying a Databricks Unity Catalog trace location. * * All three fields are required. Unlike Python's * `mlflow.set_e...
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/** * @file Text Buffer * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { CanvasTexture, Vector3, Matrix4 } from 'three'; import '../shader/SDFFont.vert'; import '../shader/SDFFont.frag'; import MappedQuadBuffer from './mappedquad-buffer'; import { BufferData, BufferTypes, BufferParamete...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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import { Directive, ElementRef, Inject, Input, OnDestroy } from "@angular/core"; import { Observable, fromEvent, merge, Subscription } from "rxjs"; import { map, filter, shareReplay, switchMap, pairwise, takeUntil, switchMapTo } from "rxjs/operators"; import { getExportNehuba } from 'src/util/fn' import { computeDistan...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * @file Alignment * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { Debug, Log } from '../globals' // const nucleotides = 'ACTG'; const aminoacidsX = 'ACDEFGHIKLMNPQRSTVWY' const aminoacids = 'ARNDCQEGHILKMFPSTWYVBZ?' const blosum62x = [ [4, 0, -2, -1, -2, 0, -2, -1, -1, -1, -1,...
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/** * @file Molecular Surface Representation * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { RepresentationRegistry } from '../globals' import { defaults } from '../utils' import StructureRepresentation, { StructureRepresentationParameters, StructureRepresentationData } from './struct...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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import { javascript } from "@codemirror/lang-javascript"; import { json } from "@codemirror/lang-json"; import { python } from "@codemirror/lang-python"; import { xml } from "@codemirror/lang-xml"; import { indentUnit } from "@codemirror/language"; import { searchKeymap } from "@codemirror/search"; import { history, hi...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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// Imported only so the `{@link LIST_REGISTRY}` reference below resolves; eslint // cannot see JSDoc links as usage. // eslint-disable-next-line @typescript-eslint/no-unused-vars import { LIST_REGISTRY } from '../data-sources/duckdb/lists'; import type { MetadataDataSource } from '../data-sources/MetadataDataSource'; i...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/* * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you ...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * @file Tube Mesh Buffer * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ // @ts-ignore: unused import Matrix4 required for declaration only import { Vector3, Matrix4 } from 'three' import { defaults, getUintArray } from '../utils' import { serialArray } from '../math/array-utils' import M...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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import { quicksortIP, quicksortCmp, arraySortedCmp, quickselectCmp } from '../../src/math/array-utils' describe('math/array-utils', function () { describe('quicksortIP', function () { it('eleSize 1', function () { var list = [ 3, 0, 5, 9, 2, 1, 7 ] // console.log( list ); var arr1 = new F...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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// @generated by protoc-gen-es v2.2.5 with parameter "target=ts" // @generated from file dbtlabs/proto/public/v1/events/fusion/invocation/invocation.proto (package v1.public.events.fusion.invocation, syntax proto3) /* eslint-disable */ import type { GenFile, GenMessage } from "@bufbuild/protobuf/codegenv1"; import { f...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * @file Validation * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { Vector3, Color } from 'three' import { Debug, Log } from '../globals' import { defaults } from '../utils' import { ClashPicker } from '../utils/picker' import { uniformArray3 } from '../math/array-utils' import { ...
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/** * @file ngl * @private * @author Alexander Rose <alexander.rose@weirdbyte.de> */ /** * The NGL module. These members are available in the `NGL` namespace when using the {@link https://github.com/umdjs/umd|UMD} build in the `ngl.js` file. * @module NGL */ export { Debug, setDebug, MeasurementDefaultParams, se...
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import { mkdtempSync, readFileSync, rmSync } from 'node:fs'; import { tmpdir } from 'node:os'; import { join } from 'node:path'; import { ensureInitialized, getEffectiveTracingConfig, MLFLOW_ENABLE_ASYNC_TRACE_LOGGING, parseTraceLocation, resolveSettingsPath, writeTracingSettings, } from '../src/config'; ...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/*! ***************************************************************************** Copyright (c) Microsoft Corporation. All rights reserved. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www....
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import type { Edge, Node as ReactFlowNode } from '@xyflow/react'; import { beforeEach, describe, expect, it } from 'vitest'; import { isCardCompact, useLineageStore } from './lineageStore'; const ROOT = 'model.jaffle_shop.customers'; function graph(): { nodes: ReactFlowNode[]; edges: Edge[] } { return { nodes:...
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// biome-ignore-all lint/correctness/noUnusedPrivateClassMembers: AudioUltra; skip unsafe removal import type { ColorMapper } from "../../ColorMapper"; import type { LRUCache } from "../../../Common/LRUCache"; import { type BatchProgress, type DetailedComputationProgress, TaskPriority, } from "../../../Common/Wor...
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/** * @file ngl * @private * @author Alexander Rose <alexander.rose@weirdbyte.de> */ /** * The NGL module. These members are available in the `NGL` namespace when using the {@link https://github.com/umdjs/umd|UMD} build in the `ngl.js` file. * @module NGL */ export { Debug, setDebug, MeasurementDefaultPara...
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/** * @file Contact * @author Alexander Rose <alexander.rose@weirdbyte.de> */ import { Color } from 'three' import { Debug, Log } from '../../globals' import { createParams } from '../../utils' import { TextBufferData } from '../../buffer/text-buffer' import Structure from '../../structure/structure' import AtomPr...
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import type { BezierPoint } from "../types"; import type { EventHandlerProps } from "./types"; import { getClosestPointOnLine, getClosestPointOnBezierCurve } from "../utils"; import { addBezierPoint } from "./drawing"; // Convert stage coordinates to image coordinates export function stageToImageCoordinates( stagePo...
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import { sanitizeHtml, htmlEscape, matchesSelector, findByXpath, isValidTreeNode, getNodesInRange, getTextNodesInRange, findNodeAt, removeSpans, } from "../html"; const htmlSanitizeList = [ { input: '<iframe src="http://malicious.com"></iframe>', expected: "", }, { input: "<script>a...
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export const allTagsConfig = ` <View> <Audio name="audio" value="$audio" /> <TextArea name="textarea" toName="audio"/> <Choices name="choices" toName="audio"> <Choice value="choices_1" /> <View> <Choice value="choices_2" /> </View> </Choices> <Number name="number"...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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// @generated by protoc-gen-es v2.2.5 with parameter "target=ts" // @generated from file dbtlabs/proto/public/v1/events/dbt_index.proto (package v1.public.events.dbt_index, syntax proto3) /* eslint-disable */ import type { GenFile, GenMessage } from "@bufbuild/protobuf/codegenv1"; import { fileDesc, messageDesc } from...
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import { InjectionToken } from "@angular/core" import { merge, Observable, of, Subject, Subscription } from "rxjs" import { filter, map, mapTo, pairwise, switchMap, switchMapTo, takeUntil, withLatestFrom } from 'rxjs/operators' import { getUuid } from "src/util/fn" import { TLineJsonSpec } from "./line" import { TPoint...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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import { ExportResult, ExportResultCode } from '@opentelemetry/core'; import { Context } from '@opentelemetry/api'; import { Span as OTelSpan, ReadableSpan as OTelReadableSpan, SpanProcessor, SpanExporter, } from '@opentelemetry/sdk-trace-base'; import { createAndRegisterMlflowSpan } from '../core/api'; import ...
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import { TestBed } from "@angular/core/testing" import { provideMockStore } from "@ngrx/store/testing" import { AtlasWorkerService } from "src/atlasViewer/atlasViewer.workerService.service" import { AngularMaterialModule } from "src/sharedModules" import { getUuid } from "src/util/fn" import { IAV_POSTMESSAGE_NAMESPACE...
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/** * @file Component * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { Vector3, Quaternion, Matrix4, Euler, Box3 } from 'three' import { Signal } from 'signals' import { defaults, createParams } from '../utils' import { generateUUID } from '../math/math-utils' import Annotation, { An...
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/** * @file Xtc Parser * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { Debug, Log, ParserRegistry } from '../globals' import { ensureBuffer } from '../utils' import TrajectoryParser from './trajectory-parser' import { NumberArray } from '../types'; const MagicInts = new Uint32Array([...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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import { mkdirSync, readFileSync, writeFileSync } from 'node:fs'; import { homedir } from 'node:os'; import { dirname, resolve } from 'node:path'; import { createAuthProvider, init, MlflowClient } from '@mlflow/core'; export const MLFLOW_CLAUDE_TRACING_ENABLED = 'MLFLOW_CLAUDE_TRACING_ENABLED'; export const MLFLOW_TR...
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/** * @file Contact Representation * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { defaults } from '../utils' import { RepresentationRegistry } from '../globals' import StructureRepresentation, { StructureRepresentationParameters } from './structure-representation' import { calculateC...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/* * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you ...
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/** * Licensed to the Apache Software Foundation (ASF) under one * or more contributor license agreements. See the NOTICE file * distributed with this work for additional information * regarding copyright ownership. The ASF licenses this file * to you under the Apache License, Version 2.0 (the * "License"); you...
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/** * @file Selection Parser * @author Alexander Rose <alexander.rose@weirdbyte.de> * @private */ import { SelectionRule, SelectionOperator } from './selection-test' import { kwd, SelectAllKeyword, SmallResname, NucleophilicResname, HydrophobicResname, AromaticResname, AmideResname, AcidicResname, BasicResna...