sha256 stringlengths 64 64 | language stringclasses 27
values | size int32 1 491k | lines int32 1 21.8k | content stringlengths 1 200k |
|---|---|---|---|---|
204dd313bb7a4b5d045e6acade6042dee20dd4aaa311df3b41bcea5a2290dc06 | MATLAB | 12,933 | 392 | function [bstats,wstats,cstats,sstats]=nt_idxx(fname,p)
%nt_idxx(fname,p) - create an index file to summarize large data file
%
% Usage:
% nt_idx(fname): calculate index structs, store in index file
% nt_idx(fname,p): override default parameters
% [bstats,wstats,cstats,sstats]=nt_idx(fname,...): return index stru... |
099b242f034458135fdc300e6194492944eab0078396d048c4d00a87af995844 | MATLAB | 12,950 | 367 | function outpict = imrecolor(ref,inpict,varargin)
% OUTPICT=IMRECOLOR(REFPICT,INPICT,{OPTIONS})
% Use histogram matching to transfer color information from one image to another
% without transferring any object content from the reference image, as would otherwise
% occur with a simple 'color' type imag... |
f699f6836690ca28909136eddad2029a286c07b4b2c5793c3cb2a98039a058bf | MATLAB | 12,951 | 333 | function [] = plot_stats_VMstim(results_folder, biom_1, biom_2, cat_disp, particles_no_tot, exp_abs_tot, coloc_tot, ratio_tot, pear_tot, MCC_tot, coloc)
%% data to analyse
allData = 0; % 0 excludes GF control from the analysis
%% compute normalisations
normalise_to_ctrl_rep = 0;
normalise_to_ctrl = 0;
%% analysis m... |
29b2fa738b3c3b7067d5b903856db3f8ef7d8267850c64fb8b22879360812bab | MATLAB | 13,047 | 284 | function outpict = morphnhood(inpict,varargin)
% OUTPICT=MORPHNHOOD(INPICT,MODE,{NHOOD},NUMPASSES)
% Perform the selected morphological neighborhood operation on an image.
%
% This is a passthrough to the IPT functions bwmorph(), bwperim(), and bwlookup(), with internal
% fallback implementations to help rem... |
c8f4c0d5c2bea6feb6e8c0a8b2bcdd07c31877f1506f42d1ce0df1bb303fed56 | MATLAB | 13,049 | 246 | function [sampleinfo] = writeSpykingCircus(cfg, MuseStruct, force, varargin)
% WRITESPYKINGCIRCUS writes a concatinated data file for SpykingCircus and
% sampleinfo is returned for later (cutting results back up)
%
% use as
% writeSpykingCircus(cfg, MuseStruct, force, varargin)
%
% third argument "force" is to force... |
cad2b9c27c4690cbfe003a41e67cd4b780ed7c44d0e567578edca4eb88d67267 | MATLAB | 13,087 | 335 | %% Main analysis scripts
%% Mass-univariate analysis
% scripts can be obtained from https://github.com/zhou-feng/matlab_scripts
%% Predict on discovery cohort
% the discovery dataset is availabe at
% some scripts we used were modified based on the code provided by
% Kohoutová et al.(2020, Nature Protocols,
% ... |
21c8d46de689537aeb505f4be226c59dd406261b914a7b1ba34e25d285f28d6a | MATLAB | 13,090 | 335 | %% Main analysis scripts
%% Mass-univariate analysis
% scripts can be obtained from https://github.com/zhou-feng/matlab_scripts
%% Predict on discovery cohort
% the discovery dataset is availabe at
% some scripts we used were modified based on the code provided by
% Kohoutová et al.(2020, Nature Protocols,
% ... |
c855363375db1a4131c993625c576bfe33c3887db87cfdf4fef5a2e5ffcd76c8 | MATLAB | 13,097 | 281 | function [spike] = ft_spike_maketrials(cfg,spike)
% FT_SPIKE_MAKETRIALS converts raw timestamps in a SPIKE structure to spike
% times that are relative to an event trigger in an SPIKE structure. This
% is a preprocessing step to use functions such as FT_SPIKE_PSTH.
%
% The main function of FT_SPIKE_MAKETRIALS is to cr... |
7f2cc46c8bf965bafe2f188cc4dbce8724f277171cf45d2a8b839fddd38e2544 | MATLAB | 13,150 | 326 | function result = compareMaps(maps, defineSubarea, f0Thres, varargin)
% compareMaps: calculate sparseness and inter-stimulus correlation for a
% set of activity maps
%
% Usage:
% compareMaps(maps, defineSubarea, f0Thres, whichChannel)
% Inputs:
% maps: N x 1 array of activityMap objects
% defineSubarea: how to decid... |
839b86c6afad2fea8ffa595cdd4db971c0939f61c12ffcc678970a0421d87123 | MATLAB | 13,164 | 388 | classdef TDEV < handle
%TDEV TDevAccX wrapper
% obj = TDEV() connects to Workbench server
%
% obj.TD TDevAccX object
%
% obj = TDEV('parameter',value,...)
%
% 'parameter', value pairs
% 'SERVER' string, data tank server (default 'Local')
% 'VERBOSE' bool,... |
ee12fcad92232e854a9563f2a47bc1ee4ab829f0bbf559a3e37fc48319455d93 | MATLAB | 13,184 | 339 | %% EMG ANALYSIS – MS TAPPING STUDY
%
% Estrazione e quantificazione dell’EMG (FDI) dai dati grezzi g.Tec (.hdf5)
%
% Background:
% Durante la raccolta dati, in una parte dei soggetti l’ordine dei canali
% era diverso a causa di un errore di collegamento (cable mistake) fra il
% cappuccio EEG e l’amplificatore. Pe... |
7f1641a0fb678e5eb1aca045ab6c502a796c9c44274df1456e9f31ed5a89d564 | MATLAB | 13,203 | 285 | function [spike] = ft_spike_maketrials(cfg,spike)
% FT_SPIKE_MAKETRIALS converts raw timestamps in a SPIKE structure to spike
% times that are relative to an event trigger in an SPIKE structure. This
% is a preprocessing step to use functions such as FT_SPIKE_PSTH.
%
% The main function of FT_SPIKE_MAKETRIALS is to cr... |
114889be81c7a73ee28ec39a8cdfbb7e9b3c2458e3f0a6858bd15d1cb2cc5b26 | MATLAB | 13,216 | 316 | % Scripts for recreating Figure 6 in manuscript. For transient inputs; Sustained inputs in another script
%each script for each figure
%**NOTE: highlight segment you wish to run and push "Run Selection" in Editor tab; if you push "Run", it will run the entire program**
%% Figure 6A
%Program for varying times of tr... |
5f437456e0c335f3c0cb3c5cf96aa965eda0d146899e6cec6c3613d7e1326831 | MATLAB | 13,291 | 419 | %% test threshold and filtering for analysis
%% biomarker paramters
function [pixel_thresh,min_size,max_size,do_watershed,correct_brightness, kernel, colormap] = get_biomarker_info(biomarker)
% Threshold can be between 0 and 1, with smaller values corresponding
% to higher intensity of antibody labelling required
[r... |
ee37943f34a88f08960ce0d634192094e7df345702881af76e3d98736ca82157 | MATLAB | 13,342 | 299 | function result=psignifit(data,options)
% main function for fitting psychometric functions
%function result=psignifit(data,options)
% This function is the user interface for fitting psychometric functions to
% data.
%
% pass your data in the n x 3 matrix of the form:
% [x-value, number correct, number of trials]
... |
96386364696dc341070cdeb25e62510218733f9a8d04bed65681057d929c7f87 | MATLAB | 13,392 | 399 | function plotdata(cfg,dat_micro,dat_macro,SpikeTrials)
% find datafilename corresponding to channel
channelindx = [];
for ilabel = 1 : size(dat_micro.label,1)
if strfind(dat_micro.label{ilabel},cfg.channel)
channelindx = ilabel;
end
end
% select channel for plotting
cfgtemp = [];
cfgte... |
4b149172779910f0a013275223c39044e81a68d04011dc974a47a32419e29e24 | MATLAB | 13,480 | 348 | function simulations_samsrf(REDO, basedir)
% Script to perform simulation for retinotopy data.
% ---------------------------------------------------------------------
% Copyright (C) 2024 Simon R. Steinkamp
% This program is free software: you can redistribute it and/or modify
% it under the terms o... |
64b59f4dcd59f5ee29f13f3eeea93ae2b3bb5f31e8f9825a5ab5ec1d89cde057 | MATLAB | 13,549 | 465 | % =========================================================================
% Title: Statistical Analysis and Plotting of Spectral Features
%
% Author: Gabriele Mancini
% Date: 2025-12-10
%
% Description:
% This script loads precomputed spectral and firing-rate features extracted
% from simulated LFP or EEG proxy signa... |
c328ce50a1cc7bccfef5dc1d3b61c9269a51bd0d3716824a27e321596384af97 | MATLAB | 13,620 | 314 | function [xml_doc] = serialize( header)
%SERIALIZE Summary of this function goes here
% Detailed explanation goes here
docNode = com.mathworks.xml.XMLUtils.createDocument('ismrmrdHeader');
docRootNode = docNode.getDocumentElement;
docRootNode.setAttribute('xmlns','http://www.ismrm.org/ISMRMRD');
docRootNode.setAttrib... |
6c4cdadeab1f1e8d7a83cbe8aa2d6c8728dca094d9fc390611dfb55ada40fed2 | MATLAB | 13,683 | 329 | % function [] = taskRatingR_im(subid,nsession)
% MBB motivational battery (version 2.2).
% Task RatingR
%
% Written by Raphael Le Bouc - September 2013
% Triggers and eye_tracker added by Alizee Lopez - October 2015
% modified by Nicolas Clairis - mars 2016 and re-adapted in january 2017
% for NeuroSpin study
%%Uncom... |
f941cf6fd6e301bf9fa8538aa62963316a9433859d6b517e2bee4e36874966a7 | MATLAB | 13,747 | 381 | %% FP3002_v060_Howland.m
%
% Fiber Photometry Analysis
%
% Written for the lab of John Howland - University of Saskatchewan
%
% It is recommended that users read through the documentation in full
% prior to using this analysis. This applies to each section in the code
%
% All outpu... |
397966ccaff0d261e11bede85117761c86215a7214b30ae4c12d3bdef37a822a | MATLAB | 13,807 | 374 | function [output,extras] = urlread2(urlChar,method,body,headersIn,varargin)
%urlread2 Makes HTTP requests and processes response
%
% [output,extras] = urlread2(urlChar, *method, *body, *headersIn, varargin)
%
% * indicates optional inputs that must be entered in place
%
% UNDOCUMENTED MATLAB VERSION
%
% EXAMPL... |
2477af0c098cbc1b36f52df1e6b5c9562f105b64b02a79ff28a3e1d2fb850793 | MATLAB | 13,813 | 294 | function [outpict com] = imdestroyer(inpict,iterations,amt)
% IMDESTROYER(INPICT, ITERATIONS,AMOUNT)
% feeds INPICT through randomly selected image manipulation functions
% selecting bounded random parameters each time, for ITERATIONS
% number of times.
%
% Webdocs: http://mimtdocs.rf.gd/manual/htm... |
3e0933118216100b59df0f36dc546aef39bb102c03c9a10950342043f7e80b66 | MATLAB | 13,824 | 478 | function spm_prf_editor(PRF,mask,posterior)
% Tool for exploring the prior and posterior settings of a pRF model
%
% PRF - the pRF model, which may or may not be estimated
% mask - if set, this is a 2D binary stimulus matrix which is overlaid
% on the pRF response
% posterior - if true, the poste... |
ba5edbbeffce1879eec42a33ae7de3560eca79612ad1c750f82c7bdabc8d9b99 | MATLAB | 13,892 | 418 | % =========================================================================
%
% Author: Gabriele Mancini
% Date: 2025-12-10
%
% Description:
% Loads periodic and aperiodic spectral features extracted from simulated
% LFP/EEG data (Feature_extraction.m pipeline) together with simulation
% parameters. Performs correlatio... |
e0229df40d3ff2c15d5d0f7a3e9684f5f14472128f44e4e6b760b3c29054a5fa | MATLAB | 13,923 | 373 | function Figure0(cfg, MuseStruct)
cfg.plot.units = ft_getopt(cfg.plot, 'units', []);
cfg.spike.name = cfg.plot.name;
cfg.LFP.name = cfg.plot.name;
% ncols = max(3, size(cfg.LFP.name, 2));
ncols = 2;
nrows = 6;
% get file and samplinfo to recover trials
SpikeTrials_timelocked ... |
c322b2724477dba8d1fce225eacf042719c178d9467df22ef9e07e30e7bd6ea1 | MATLAB | 13,933 | 351 | function [SpikeIndex, ChanId, SpikeFV] = mDetectSpike(varargin)
% This function detects spikes in the EEG. The input parameters to the function are
% (1) DATA = EEG signal of M x N dimension where M = data length and N = # of
% channels.
% (2) Fs = samping rate
% (3) BlockSize = length of data block to be processed in... |
761ed447cd323ea588bfd5284c866612af6ea90f82d54c99b61d1ad5cfbd28f6 | MATLAB | 13,991 | 449 | function [ftData1, ftData2] = P1_TMS_iEEG_preprocessing(dataDir, saveDir, queue, input_parameters)
% preprocessing of TMS-iEEG data
% Input:
% dataDir: directory of the folder, saving all the raw data of all subjects
% saveDir: directory of the folder, saving all the preprocessed data of all subjects
% queue: a one-co... |
44057013e72c0843ab507ddd712e89c7e91bbcd7d2456a6174bad3dfca74cef3 | MATLAB | 14,031 | 437 | function ButtonName=MFquestdlg(Pos,Question,Title,Btn1,Btn2,Btn3,Default)
% MFQUESTDLG Question dialog box.
% -----------------------------------------------------------------------
% --------------------- Modified Function Help ----------------------
% ‘MFquestdlg’ is a simple modification of ‘questdlg’ which enabl... |
567efcd69e6bd66e15dd0fdb8c4a0cab4cc58613592052d6f3440347d99d17cc | MATLAB | 14,077 | 309 | function tufteaxis(mmx, mmy)
%TUFTEAXIS changes the coordinate axis in a Tufte style.
%
% inputs:
% mmx [min(x), max(x)], the existing XTick are used, OR
% [min(x), t1, t2, t3, max(x)], use exactly these
% mmy [min(y), max(y)], the existing YTick are used, OR
% [min(y), t1, t2, t3, max(y... |
8571a7b3ed04057c49b7e4a3cbbe020fc6288600a4e66f8aa7ea08d7a9dda643 | MATLAB | 14,162 | 419 | function [data] = SEV2mat(SEV_DIR, varargin)
%SEV2MAT TDT SEV file format extraction.
% data = SEV2mat(SEV_DIR), where SEV_DIR is a string, retrieves
% all sev data from specified directory in struct format. SEV files
% are generated by an RS4 Data Streamer, or by enabling the Discrete
% Files option in the Sy... |
e4af0d946076f05bfd05abb9c3fd8c8eca23aae7a66178514b7b45f4ebcdcb6f | MATLAB | 14,177 | 270 | function [MuseStruct_corrected] = dtx_remove_wrong_seizure(cfg, MuseStruct, remove_seizure_between_2_files)
cfg.type = ft_getopt(cfg, 'type');
if ~strcmp(cfg.type, 'dtx')
MuseStruct_corrected = MuseStruct;
return
end
fname = fullfile(cfg.datasavedir,[cfg.prefix,'MuseStruct_corrected_dtx.mat']);
MuseStruct_cor... |
7c681c8a41229aa7c41264b22c115180cf78f20cd2bd6e515d95fa5931e15266 | MATLAB | 14,196 | 338 | function [trialsout] = GenerateBlocks(blocks)
%Define block contents.
for k = 1:length(blocks)
j = blocks(k);
switch j
case 1
%% block 1 %natural, coherent, upright
rep = 4;
walkerindex = [1]; %natural 1, mod... |
b50434d9c2eee1e6bae67f5a1d790552830a2366207a81e01bc8b485b89ce899 | MATLAB | 14,252 | 295 | function [SpikeRaw] = readSpikeRaw_Phy(cfg, force)
% function [SpikeRaw] = readSpikeRaw_Phy(cfg, force)
%
% SPIKERAW reads SpykingCircus results (spike times, templates, amplitudes).
% Data must have been converted for Phy GUI, with parameter prelabelling = True
% https://spyking-circus.readthedocs.io/en/latest/advan... |
cea259579ee288f1651be935e53f9ec86dc9c084dee41c0c25e1048978e05c01 | MATLAB | 14,259 | 313 | function [dat, stats_all, stats_responsive] = stats_unit_density(cfg, force)
set(groot,'defaultAxesTickLabelInterpreter','none');
hyplabels = ["REM", "AWAKE", "PHASE_1", "PHASE_2", "PHASE_3"];
fname_out = fullfile(cfg{1}.datasavedir, 'stats_unit_density.mat');
%% load data
if force == false && exist(fname_out, '... |
4eba9024cf91bd51acd9acd69b7deab163fcc18b9c94c31885b70c5aaf4546b4 | MATLAB | 14,260 | 302 | function [SpikeTrials] = readSpikeTrials_windowed(cfg, MuseStruct, SpikeRaw, force)
% [SpikeTrials] = readSpikeTrials_MuseMarkers(cfg, MuseStruct, SpikeRaw, force)
% Make a Fieldtrip spike trials structure based on equal overlapping
% windows.
%
% ### Necessary input:
% cfg.prefix = prefix to output files
%... |
a367e1080c86cd95949d17b3a1762fca7f283edc52da09c5ef04958db4a6c91a | MATLAB | 14,284 | 432 | function plotGrandAverageTimelocked(cfg, LFP, dat, dat_hyp, trialinfo)
hyplabels = ["REM", "AWAKE", "PHASE_1", "PHASE_2", "PHASE_3"];
% baseline correction
clear dat_bl
baseline_all = [-0.5 -0.2];
baseline_hyp = [dat{1}.time(1) dat{1}.time(end)]; % extract from dat - max
for iunit = 1 : size(dat, 2)
fp... |
31f6985b2a5409bab347f660912137dd9bc85e8307acf59efcae6dd77584d85f | MATLAB | 14,285 | 432 | function plotGrandAverage_timelocked(cfg, LFP, dat, dat_hyp, trialinfo)
hyplabels = ["REM", "AWAKE", "PHASE_1", "PHASE_2", "PHASE_3"];
% baseline correction
clear dat_bl
baseline_all = [-0.5 -0.2];
baseline_hyp = [dat{1}.time(1) dat{1}.time(end)]; % extract from dat - max
for iunit = 1 : size(dat, 2)
f... |
2c79591f7a2eac1710979cf2c450177c109bb83ed59f8ec4a57c646e4f40926e | MATLAB | 14,317 | 466 | function plotGrandAverage_windowed(cfg, LFP, dat, dat_hyp, trialinfo)
hyplabels = ["REM", "AWAKE", "PHASE_1", "PHASE_2", "PHASE_3"];
% baseline correction
clear dat_bl
baseline_all = [-0.5 -0.2];
baseline_hyp = [dat{1}.time(1) dat{1}.time(end)]; % extract from dat - max
for iun... |
7e467fbaaed49cc4ae7839a5f030b834f4900f55e2fa278bbb74f4c2993ec693 | MATLAB | 14,339 | 534 | function ctout = colorpicker(varargin)
% COLORTABLE=COLORPICKER(IMAGE, {OPTIONS})
% Opens an interactive GUI for selecting colors from an existing image
%
% The current image view can be zoomed using the mouse wheel.
% Color points may be selected by simply clicking on the image.
%
% Upon selection of a c... |
ac9d7d6c311f1dc5f7f4fd90f15ea744aa15c30dd324cd7e7fb28e378ea5a2e2 | MATLAB | 14,369 | 332 | function Figure1
restoredefaultpath
if isunix
addpath /network/lustre/iss01/charpier/analyses/stephen.whitmarsh/git/fieldtrip
addpath /network/lustre/iss01/charpier/analyses/stephen.whitmarsh/EpiCode/projects/hspike/
addpath /network/lustre/iss01/charpier/analyses/stephen.whitmarsh/EpiCode/shared/
addp... |
628fb24953e1551c06c9da1da137cdaa3cac0c2383e45e6899cfcbefb338e1a2 | MATLAB | 14,394 | 335 | function [MuseStruct] = alignMuseMarkersXcorr(cfg, MuseStruct, force)
% ALIGNMUSEMARKERSXCORR determines timing shift of MUSE markers according
% to crosscorrelation with average
%
% use as
% [MuseStruct] = alignMuseMarkersXcorr(cfg, MuseStruct, force)
%
% Multiple channels can be used simultaneously.
% Results are... |
54b1a4090de266ca3e0c34ae431908e0df4a420cb4c1c376a9ace48e49d3e616 | MATLAB | 14,416 | 362 | function err = fLocAnalysis(session, init_params, glm_params, clip, QA)
%
% Automated analysis of fMRI data from fLoc funcional localizer experiment
% using vistasoft functions (https://github.com/vistalab/vistasoft).
%
% err = fLocAnalysis(session, [init_params], [glm_params], clip, [QA])
%
% INPUTS
% 1) session: ... |
c3ac4c47116ac430b8b6d0149287621710ac60b73b888ff61ec0aa301a60ac13 | MATLAB | 14,448 | 344 | % Contact ythomas@csail.mit.edu or msabuncu@csail.mit.edu for bugs or questions
%
%=========================================================================
%
% Copyright (c) 2008 Thomas Yeo and Mert Sabuncu
% All rights reserved.
%
%Redistribution and use in source and binary forms, with or without
%modification, a... |
9f6e2cf4a86822a19399530bc3a5fe0d8505a1be6c57ee77102f96e2be0e65df | MATLAB | 14,459 | 303 | function [SpikeRaw] = readSpikeRaw_Phy(cfg, force)
% function [SpikeRaw] = readSpikeRaw_Phy(cfg, force)
%
% SPIKERAW reads SpykingCircus results (spike times, templates, amplitudes).
% Data must have been converted for Phy GUI, with parameter prelabelling = True
% https://spyking-circus.readthedocs.io/en/latest/advan... |
c4aec4e41d10fb8c891aa18f60a3672d0cd09ec1f27e5db97079a8b9b6da6ddb | MATLAB | 14,470 | 262 | function [config] = katia_setparams
disp('setting parameters');
if ismac
error('Platform not supported')
elseif isunix
rootpath_analysis = '/network/lustre/iss02/charpier/analyses/vn_pet';
rootpath_data = '/network/lustre/iss02/epimicro/patients/raw';
os = 'unix';
elseif ispc
... |
184a77719249c21434b106a7ca363180a03dbbd62bf34cf0c864090d0b63dfe9 | MATLAB | 14,473 | 335 | function [MuseStruct] = readMuseMarkers(cfg, force)
% READMUSEMARKERS crawls and searches through patient directories to
% extracts marker timings (time and samples) created by Muse.
%
% use as
% [MuseStruct] = readMuseMarkers(cfg, force)
%
% The first argument is the configuration struct defined by a _setparams.m... |
30a612f0ea1c4f94ea1d6d1d561e55aa41c2108891437ce5d483fea9365c38ff | MATLAB | 14,512 | 370 | %% extract all markers
addpath('~/fieldtrip');
ft_defaults
patient_directory = '/Volumes/epimicro/Donnees-analyses/Stephen/2230 files with markers/';
directory_searchstring = '02230*';
data_searchstring = '*m1*.ncs';
eventtype_start = 'BAD__START__';
eventtype_end = 'BAD__END__';
[bad.... |
9dc494cabf802a3db9d3bd55ab01515674a7e1c610e4af19ef21c4c16cc232dd | MATLAB | 14,557 | 276 | function Figure3(cfg_fig)
cfg = pnh_setparams;
cfg_fig.plot.name = {'PSW', 'FA', 'ES'};
ipart = 1;
for ipatient = 1 : 4
SpikeTrials{ipatient} = readSpikeTrials_MuseMarkers(cfg{ipatient});
SpikeDensity{ipatient} = spikeTrialDensity(cfg{ipatient});
SpikeWaveforms{ipatient} = read... |
7853aa975ae78fd06cfbde47e21b869b704854ba8bd062efc2b486680687267a | MATLAB | 14,584 | 301 |
%% set parameters
if ispc
addpath (genpath('\\lexport\iss01.charpier\analyses\lgi1\Git-Paul\EpiCode\development'));
addpath \\lexport\iss01.charpier\analyses\lgi1\Git-Paul\fieldtrip;
ft_defaults
addpath (genpath('\\lexport\iss01.charpier\analyses\lgi1\Git-Paul\EpiCode\projects\dtx'));
addpath (genp... |
f70cb41be7b555b9d4c8ee73f219fe39b56c355bfb0e52f93cbf78877bbd9f82 | MATLAB | 14,620 | 311 | function [LFP] = readLFPavg(cfg, MuseStruct, force)
% READLFP reads data epoched according to markers from MuseStruct.
% Use as
% [LFP] = readLFP(cfg, MuseStruct, force)
%
% Will also mark overlap with hypnogram markers
% Optionally downsample to same samplerate if data contains multiple
% samplerates to allow combi... |
b8fb894cd0707f5da862f6516a82cb6b22aadb2f171515ef6abca0057aa90718 | MATLAB | 14,663 | 364 | function [total_cells_table,cells_table,stats] = get_DCX_figures_new2(save_path,area)
% Find mat files for final results dataset
cell_categories = {'A', 'B','C', 'D','E', 'F'};
files = dir(fullfile(save_path,'*.mat'));
for i = 1:length(files)
indx(i,1) = contains(files(i).name,'._');
end
files(indx,:) ... |
9bcb12ea72a45fdd58d4ebee9e0be12fc825441167448267df579ca3b554b673 | MATLAB | 14,717 | 296 | function [SpikeTrials] = readSpikeTrials_MuseMarkers(cfg, MuseStruct, SpikeRaw, force)
% [SpikeTrials] = readSpikeTrials_MuseMarkers(cfg, MuseStruct, SpikeRaw, force)
% Make a Fieldtrip spike trials structure based on a Fieldtrip raw spike
% structure and on timings defined by Muse Markers.
% Trials separated between ... |
e9d71bf80efe8af010e9a1e10342a8514343ae6b193b456235e79b598856cb83 | MATLAB | 14,746 | 397 | function outpict = textblock(intext,geometry,varargin)
% OUTPICT=TEXTBLOCK(INTEXT,SIZE,{OPTIONS})
% Generate an image containing a multi-row block of specified text rendered as
% fixed-width white characters on a black background. This tool uses textim();
% as such, the character set is IBM CP437. See t... |
204bb4e111fd91f8b3c4a10da6513504ecfbadb907a0c6e6fdd461f4c585b088 | MATLAB | 14,771 | 278 | function Figure3(cfg_fig)
cfg = pnh_setparams;
cfg_fig.plot.name = {'PSW', 'FA', 'ES'};
ipart = 1;
for ipatient = 1 : 4
SpikeTrials{ipatient} = readSpikeTrials_MuseMarkers(cfg{ipatient});
SpikeDensity{ipatient} = spikeTrialDensity(cfg{ipatient});
SpikeWaveforms{ipatient} = read... |
177ef1816c9e931615fe030fd742fa27bf8e1f5d39d5ea7ab9aab8eb8f8aafb5 | MATLAB | 14,855 | 457 | %
% BDP BrainSuite Diffusion Pipeline
%
% Copyright (C) 2019 The Regents of the University of California and
% the University of Southern California
%
% Created by Chitresh Bhushan, Divya Varadarajan, Justin P. Haldar, Anand A. Joshi,
% David W. Shattuck, and Richard M. Leahy
%
% This program is free sof... |
b92961e94e6b6c416f558a74550f668101d3f3d311cccc152ac2a8b8c6cba6a8 | MATLAB | 14,881 | 401 | function [B,ndx,dbg] = natsort(A,rgx,varargin)
% Natural-order / alphanumeric sort the elements of a text array.
%
% (c) 2012-2024 Stephen Cobeldick
%
% Sorts text by character code and by number value. By default matches
% integer substrings and performs a case-insensitive ascending sort.
% Options to select th... |
5203dfe2397dc05640cb40f3ff91ce4ffc3464b43bc4b71686930e47230d5aea | MATLAB | 14,882 | 393 | function CBIG_ComputeROIs2ROIsCorrelationMatrix(output_file, subj_text_list1, subj_text_list2, ...
discard_frames_list, ROIs1, ROIs2, regression_mask1, regression_mask2, all_comb_bool, avg_sub_bool)
% CBIG_ComputeROIs2ROIsCorrelationMatrix(output_file, subj_text_list1, subj_text_list2, discard_frames_list, ...
% R... |
7e6346f2284ea6dc46904266d1ff80f5b86e30e5a0e3676b55d44e17dadd4ba0 | MATLAB | 14,919 | 400 | function [particles_no_tot, exp_abs_tot, coloc_tot, ratio_tot, pear_tot, MCC_tot] = summarise_VMstim(results_folder, repeat_names, biom_1, biom_2,coloc)
%% Create summary plot of results biomarker
% @author: speressotti
%% Folders
% figures
fig_folder = fullfile(results_folder, biom_1,'Figures');
if ~exist(fi... |
7199e077e1a5b980f8760d2c031a09ed210bbd72764b3146157665022816eb12 | MATLAB | 15,007 | 363 | function Figure_raster
restoredefaultpath
if isunix
addpath /network/lustre/iss01/charpier/analyses/stephen.whitmarsh/git/fieldtrip
addpath /network/lustre/iss01/charpier/analyses/stephen.whitmarsh/EpiCode/projects/hspike/
addpath /network/lustre/iss01/charpier/analyses/stephen.whitmarsh/EpiCode/shared/
... |
66d6e4c2cc05ee10c67b890749dfdad0a6d6b2fe3be094d1dc6554f63c1d9c1c | MATLAB | 15,036 | 323 | function [SpikeRaw] = readSpikeRaw_Phy(cfg, force)
% function [SpikeRaw] = readSpikeRaw_Phy(cfg, force)
%
% SPIKERAW reads SpykingCircus results (spike times, templates, amplitudes).
% Data must have been converted for Phy GUI, with parameter prelabelling = True
% https://spyking-circus.readthedocs.io/en/latest/advan... |
54d82dee5623a950fd708e89fc5fb4c8ad5cc922e34f56341e47cac78a35fe1f | MATLAB | 15,087 | 253 | function [micromed_markers] = synchronize_micromed2
addpath /network/lustre/iss01/charpier/stephen.whitmarsh/WhitmarshEpilepsy
addpath /network/lustre/iss01/charpier/stephen.whitmarsh/WhitmarshEpilepsy/releaseDec2015/
patientdir = '/network/lustre/iss01/charpier/stephen.whitmarsh/data/pat_02614_1073/';
ft_defaults
%... |
fc6e178f1dca78bab4032711807918222a439ddc341b5cb9b3f8418df43fb071 | MATLAB | 15,117 | 356 | function [MuseStruct] = readMuseMarkers(cfg, force)
% READMUSEMARKERS crawls and searches through patient directories to
% extracts marker timings (time and samples) created by Muse.
%
% use as
% [MuseStruct] = readMuseMarkers(cfg, force)
%
% The first argument is the configuration struct defined by a _setparams.m... |
64e199fa97bb03af7d63d29d35abab0e6a27040fe17dcb410a17867447a0c2e9 | MATLAB | 15,191 | 412 | function varargout = imstats(instack,varargin)
% OUTARRAY=IMSTATS(INPICT,METRICS,{OPTIONS})
% [OV1 OV2 ...]=IMSTATS(INPICT,METRICS,{OPTIONS})
% Returns information about image colors. This is mostly a convenience
% tool to avoid dealing with reshaping arrays, avoiding NaNs, etc.
%
% INPICT is a... |
364a9876fefe58fc9a570f659157701394883609a9c177e6f29d0f8c2314429d | MATLAB | 15,246 | 521 | % main script for vector remapping
workdir_d = ["F:\Included miniscope Mice\M119\TrainingD11\" "F:\Included miniscope Mice\M120\TrainingD11\" "F:\Included miniscope Mice\M292\TrainingD6\" "F:\Included miniscope Mice\M319\TrainingD7\" "D:\Grouping First\M231\TrainingD9\" "D:\Grouping First\M314\Training_Separation... |
5793011069c92cb50e7d9404aa6077bcadfe84339d8e6cbf34cb6ea456639a9d | MATLAB | 15,324 | 341 | clc; clear;
stack_colors = {'k','','r','b','m'};
skip_lines = 19;
% jrr & tyr
sessions = [1968 1973 2026 2031 2035 2037 2041 2689 2699 2788 2796 2803 2835];
% jrr
%sessions = [2689 2699 2788 2796 2803 2835];
% tyr
%sessions = [1968 1973 2026 2031 2035 2037 2041];
% jrr and tyr 4ch;
left_channels = [1 2];
right_ch... |
77d410832dc5e7744ba094478e758bdac7487d2456d1047cd72f9585a2a07aa0 | MATLAB | 15,324 | 331 | clc; clear;
stack_colors = {'k','','r','b','m'};
skip_lines = 19;
sessions = [1964 1986 1992 1995 1998 2005 2039 2790 2792 2794 2798 2815 2843];
% jrr and tyr 4ch;
left_channels = [1 2];
right_channels = [3 4];
peri_all_stack5 = []; peri_all_stack4 = []; peri_all_stack3 = []; peri_all_stack1 = [];
low_freq_ind = 1:2... |
e29fbc9b4a873bd7ee76125a592dbd6c05d56b7ecb4bbdcf1ceece1e6faa164b | MATLAB | 15,329 | 261 | function [micromed_markers] = synchronize_micromed
addpath /network/lustre/iss01/charpier/stephen.whitmarsh/WhitmarshEpilepsy
addpath /network/lustre/iss01/charpier/stephen.whitmarsh/WhitmarshEpilepsy/releaseDec2015/
patientdir = '/network/lustre/iss01/charpier/stephen.whitmarsh/data/pat_02614_1073/';
patientdir = '... |
69571f3b7bdd0994d212b6adc5d5133229ab9a2f9f43de496fb00fe93b0243de | MATLAB | 15,370 | 507 | function [] = mc_undist()
%% Read parameters from files
fid = fopen('./prod.par','rb');
% catch problems with old par files
seq=0;
fftscale=1.5e9;
TE = 19;
TR = 2000;
%
sLine=fgets(fid);
count=0;
while (sLine>-1)
sLine=fgets(fid);
eq=findstr(sLine,'=');
if(~isempty(eq))
sParameter=deblank(sLin... |
3161173ad32a0e726cee625c1c58154696ad6498f5200440197e8928a969a68c | MATLAB | 15,393 | 472 | function [final_divided,sz_parameters,feature_list] = extract_data_R(animal_info,path_extract,seizure_duration_list,feature_list,folder_num,drug,second_stim,raw_or_normalized)
% On-Demand Seizures Facilitate Rapid Screening of Therapeutics for Epilepsy
% Authors: Yuzhang Chen, Brian Litt, Flavia Vitale, Hajime Takano
... |
3ab8f96be08877e1266408193ffcdf738753a16c68c47d486459afbe945019f6 | MATLAB | 15,395 | 448 | function plotdata_corr(cfg,dat_micro,dat_macro)
% find datafilename corresponding to channel
channelindx = [];
for ilabel = 1 : size(dat_micro.label,1)
if strfind(dat_micro.label{ilabel},cfg.channel)
channelindx = ilabel;
end
end
% select channel for plotting
cfgtemp = [];
cfgtemp.chan... |
cfa22f88dc34019227985bb16c79ac04851be8a3c5db5267ce1c754f90b51357 | MATLAB | 15,396 | 393 | function tom_localizer(subjID, run)
%% Version: September 7, 2011
%__________________________________________________________________________
%
% This script will localize theory-of-mind network areas by contrasting
% activation during false-belief tasks, in which characters have incorrect
% beliefs about the state of ... |
097687e07eede9b6d15583a1a8e672f31e24565a9ff6069e8032640a55ceffce | MATLAB | 15,399 | 385 | function [emm] = emmeans(fitmodel, varargin)
% Estimate marginal means
% NOTE: this function only works with models that contain no categorical-continuous interactions.
%
% Surprisingly, GeneralizedLinearMixedModel class does not store whether
% the model was fit using OFFSET. so the user must indicate this.
% Same t... |
d27479ea530fb20fa904ba445b8f7618b89110967ff0869091572c4f83633623 | MATLAB | 15,405 | 450 | function plotdata_corr(cfg,dat_micro,dat_macro)
% find datafilename corresponding to channel
channelindx = [];
for ilabel = 1 : size(dat_micro.label,1)
if strfind(dat_micro.label{ilabel},cfg.channel)
channelindx = ilabel;
end
end
% select channel for plotting
cfgtemp = [];
cfgtemp.chan... |
39667fb9d6c5938d28c480e377b3c4e18e7c955b644d5546b39633005dd7599a | MATLAB | 15,440 | 394 | function tom_localizer_ts(subjID, run)
%% Version: September 7, 2011
%__________________________________________________________________________
%
% This script will localize theory-of-mind network areas by contrasting
% activation during false-belief tasks, in which characters have incorrect
% beliefs about the state ... |
442d53e3b3db44ca2a2711f3b8f31609566756cdbdc0b760552d4261399289fc | MATLAB | 15,481 | 408 | function [LFP,Mode,Channels,Units,Sweeps] = LoadHDF5(filename,varargin)
% LoadHDF5 - Load HDF5 file (obtained from MultiChannel System recordings).
%
% USAGE
%
% [LFP,Mode,Channels,Units,Sweeps] = LoadHDF5(filename,varargin)
%
% This function calls the McsHDF5 Toolbox and reorganizes data for convenience
%
% ... |
34afe9e30ce2d68b027d62f38b1475b483fc5eddaf5c94ea02e9345459156356 | MATLAB | 15,535 | 279 | function [config] = PET_setparams
disp('setting parameters');
if ismac
error('Platform not supported')
elseif isunix
rootpath_analysis = '/network/lustre/iss02/charpier/analyses/vn_pet';
rootpath_data = '/network/lustre/iss02/epimicro/patients/raw';
os = 'unix';
elseif ispc
... |
b057ea6a0f8dc12197012d54a53c8b362ef181e8d8bee6f2434e6fee4e1436fe | MATLAB | 15,535 | 472 | %
% BDP BrainSuite Diffusion Pipeline
%
% Copyright (C) 2019 The Regents of the University of California and
% the University of Southern California
%
% Created by Chitresh Bhushan, Divya Varadarajan, Justin P. Haldar, Anand A. Joshi,
% David W. Shattuck, and Richard M. Leahy
%
% This program is free sof... |
b0a8a2ad3ea030d0e5a55568e98351eecf0324da2077d7931a00224050b8b004 | MATLAB | 15,546 | 410 | function outpict = imtweak(inpict,model,cparams,varargin)
% IMTWEAK(INPICT,COLORMODEL,CPARAMS,{OPTIONS})
% allows simplified manipulation of RGB images or triplets using a
% specified color model.
%
% INPICT is an RGB/RGBA/RGBAAA image of any numeric image class. Alpha is unmodified.
% Multifr... |
332b58e0ce621670976398b24a8586bc74f4762e46168bb733e8f39d42ecb518 | MATLAB | 15,606 | 440 | function [features,norm_features] = calculate_features(path_extract,filter_sz,feature_list, winLen, winDisp, bp_filters)
% On-Demand Seizures Facilitate Rapid Screening of Therapeutics for Epilepsy
% Authors: Yuzhang Chen, Brian Litt, Flavia Vitale, Hajime Takano
% DOI: https://doi.org/10.7554/eLife.101859
% Function... |
1ba501fd37a4dc79f3fe77b670292b478631c328cf2b6c63e9375cac581340b1 | MATLAB | 15,626 | 422 | function fit = fit_meta_d_mcmc_group(nR_S1, nR_S2, mcmc_params, fncdf, fninv, name)
% fit = fit_meta_d_mcmc_group(nR_S1, nR_S2, mcmc_params, fncdf, fninv)
%
% Given data from an experiment where observers discriminate between two
% stimulus alternatives on every trial and provides confidence ratings,
% fits equal-varia... |
f9e601141510a8e1cf199af9e65d975e2d7d31fece3496b756a6fccb0d74437a | MATLAB | 15,747 | 351 | function [MuseStruct] = readMuseMarkers_discontinuousMicromed(cfg, force)
%In addition to readMuseMarkers.m, this scripts reads the text file
%associated with Micromed data and reconstruct real time if the EEG file
%was composed of several fragments, from different times.
fname = fullfile(cfg.datasavedir, sprintf('%... |
4c0e1b8bf1fd274af23fa271d62756cf8f3fd1d99fdaec2331e510a82999c3ba | MATLAB | 15,850 | 460 | %% ==================== Figure 4 (Locust) ====================
clear all; close all; clc;
% Load data
load('data4_locust_PN85.mat');
%% Fig 4b: PCA contrast enhanced
clc; close all;
pcDim = 1:3;
smooth = 10;
for oo = 7 %1:2:size(contrastOrg,1)
tempName1 = strcat('data.',contrastOrg{oo,1});
temp... |
d9303e3ece3fe9aed04f890d24f13e99572c30de6ece6fd029970550d17374b9 | MATLAB | 15,900 | 572 | function uTest_RenameField(doSpeed)
% Automatic test: RenameField
% This is a routine for automatic testing. It is not needed for processing and
% can be deleted or moved to a folder, where it does not bother.
%
% uTest_RenameField(doSpeed)
% INPUT:
% doSpeed: Optional logical flag to trigger time consuming speed tes... |
9227df5fc4339cffac11f492f9dd5c20e29f64b8a04d82e090c06ed2267a61cd | MATLAB | 15,906 | 427 | %% ==================== Figure 3 (Locust) ====================
clear all; close all; clc;
% Load data
load('data3_locust_PN66.mat');
%% Fig3a: Correlation between all ON-OFF periods & distribution of corr values
clc;
maxON = [];
maxOFF = [];
for oo = 1:nOdors
tempData = eval(odors{oo});
maxON = [m... |
fc67b6b1d60e1ec34d8027d5e9be624d618bd63970caa7604559695a6b8857de | MATLAB | 15,997 | 498 | function varargout = imrectify(rawvec,varargin)
% IMRECTIFY(RAWVEC, {OPTIONS})
% This is a tool for recovering an image when it is presented as a vector without knowledge
% of its original geometry. This may occur when retrieving data from hardware or custom
% software which writes images in nonstan... |
9c9327d6d2a8a256db30e00e378754abab0921d2f80799f06ec8fdfb76e22c7a | MATLAB | 16,071 | 286 | function [dat_unit, dat_lfp] = plotGrandAverageTimelockedModel(cfg, force)
set(groot,'defaultAxesTickLabelInterpreter','none');
hyplabels = ["REM", "AWAKE", "PHASE_1", "PHASE_2", "PHASE_3"];
fname_out = fullfile(cfg{1}.datasavedir, 'AllDataCombinedTimelocked.mat');
%% load data
if force == false && exist(fname_o... |
90e4ba4ff004aa8eb71385d9fa003bb431cfb2b76dd9bb0d8c482691b6b18886 | MATLAB | 16,130 | 363 | function [config] = Figure_template_timing
restoredefaultpath
if isunix
addpath /network/lustre/iss01/charpier/analyses/stephen.whitmarsh/git/fieldtrip
addpath /network/lustre/iss01/charpier/analyses/stephen.whitmarsh/EpiCode/projects/hspike/
addpath /network/lustre/iss01/charpier/analyses/stephen.whitmars... |
6d2e6af51931288050215681429eb74077be0e932b1d7cb89e549c4ca369a2c1 | MATLAB | 16,150 | 413 | %% Analysis script for Valerio Frazzini's study on electrophysiology of pathoanatomy
%
% (c) Stephen Whitmarsh, stephen.whitmarsh@gmail.com
%
% requires bandpassFilter.m from Mario
% requires releaseDec2015 from Neuralynx website
%% Add path
restoredefaultpath
if isunix
addpath /network/lustre/iss01/charpier/anal... |
73a6e11b315084d8791f2b2a580954abfd12c57f13de02cfb7c7510680875ad4 | MATLAB | 16,189 | 339 | function [config] = dtx_spikes_setparams(config)
disp('setting parameters for probe spike analysis');
if ismac
error('Platform not supported')
elseif isunix
rootpath_analysis = '/network/lustre/iss01/charpier/analyses/lgi1/DTX-spikes/';
rootpath_data = '/network/lustre/iss01/charpier/raw/lgi1/DTX-r... |
8af090341749285d4f1f123815640e6f5fc0c15fe4c04008bef7c81915117cf1 | MATLAB | 16,216 | 292 | function [dat_unit, dat_lfp] = stats_IED_behaviour(cfg, MuseStruct, force)
set(groot,'defaultAxesTickLabelInterpreter','none');
hyplabels = ["REM", "AWAKE", "PHASE_1", "PHASE_2", "PHASE_3"];
fname_out = fullfile(cfg{1}.datasavedir, 'stats_IED_behaviour.mat');
%% load data
if force == false && exist(fname_out, 'f... |
53146f50712b338543385387eae11b2360dc47c1037d9c4d6829ba0618d8db22 | MATLAB | 16,251 | 412 | classdef icparams
% ICPARAMS
% Class for image composition parameter (ICP) objects. This is intended for eventual use
% in IMCOMPOSE and MERGEDOWN to allow a standardized method of storing composition setups.
%
% This is all rather half-baked. For sake of convenience in handling the referent image, the
% ICP object... |
c33ddac00e74c307a2fbb72efe21a45a7ac62fadd5e3a0c075c7e7d252f80f79 | MATLAB | 16,404 | 287 | function out = PsignifitLegacyOptionsConverter( varargin )
%% function out = PsignifitLegacyOptionsConverter( varargin )
%
% Converts the most important options from the bootstrap-based legacy version 2.5
% to new Bayesian psignifit 4.
%
% FAW 04.2017 v0.5 Conversion of the most important options.
% ... |
6348b2743b51cada66372139a66ddb1d5b6dcfeca1459c0049179ffacb0851cc | MATLAB | 16,548 | 436 | function [seizure_duration,min_thresh,output_array,sz_parameters,to_fix_chart] = predict_seizure_duration(path_extract,sz_model,countdown_sec,to_fix_chart,to_plot,subFolders, max_trial,seizure_input)
% On-Demand Seizures Facilitate Rapid Screening of Therapeutics for Epilepsy
% Authors: Yuzhang Chen, Brian Litt, Flavi... |
bdd4eb0404014424ec7d5843d9a3ba5bc77733102bc6a99870b02b432e90ec5f | MATLAB | 16,601 | 323 | function [Sm,Dm,RESULTS,varargout] = patchGraFT(data,K,patches,corr_kern, params)
% RUN_GRAFT_PATCHES - apply GraFT algorithm on overlapping patches in parallel
%
% [Sm,Dm,RESULTS] = run_GraFT_patches(data,K,patches,corr_kern, params)
%
% Run the GraFT algorithm on a large dataset by operating on
% spatially overlapp... |
1c709461f31eb13a9cd7c98cf97ecddeeba188cc187d43ab7197939be5da2a80 | MATLAB | 16,636 | 376 | function [D,S] = mergeGraFTdictionaries(D,S,options,normalizeSpatial)
% function [D,S] = mergeGraFTdictionaries(D,S,options,normalizeSpatial)
%
%
%
% 2020 - Gal Mishne & Adam Charles
% 2022 - Alex Estrada - getSpatialWeights Update
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%% Initial... |
ab7db9af7de3f091034b92e1d68d28994f614c2c9b5005cb237df73b7ec430fe | MATLAB | 16,648 | 386 | % -------------------------------------------------------------------------------------------------
% (c) 2025 Leon F. Heffer, David J. Sly, James B. Fallon, Rick Minter, Rebecca C. Felsheim,
% Mathias Dietz and Stephen J. O’Leary.
%
% This file is part of a repository that contains the data originally recorded by He... |
fee9ad69b4e8493c82e8a790d91d0b5473b757dfbf138b8104d543bb11954b33 | MATLAB | 16,707 | 370 | classdef OcTree < handle
% OcTree point decomposition in 3D
% OcTree is used to create a tree data structure of bins containing 3D
% points. Each bin may be recursively decomposed into 8 child bins.
%
% OT = OcTree(PTS) creates an OcTree from an N-by-3 matrix of point
% coordinates.
%
% OT = OcTr... |
f9d76bbaf74dc0eb22906f070cd1591cc8bc2da29b4d29ad749c6430c5e5f0de | MATLAB | 16,741 | 321 | addpath /network/lustre/iss01/home/laurent.bailly/fieldtrip/
ft_defaults
addpath /network/lustre/iss01/epimicro/patients/shared/Laurent/Scripts_matlab/
% addpath /network/lustre/iss01/charpier/analyses/stephen.whitmarsh/fieldtrip/
ft_defaults
%% Settings
vect_pat = [2067, 2098, 2141, 2161, 2222, 2256... |
04a766d4ecc5f8a9b057767ff45cc77aab1dc8f47858b8bae8afb05082fe8a05 | MATLAB | 16,752 | 349 | function [senseMaps, eigenVal] = nullspace_vectors_G_matrix_2D(kCal, N1, N2, G, patchSize, ...
varargin)
% Function that calculates the nullspace vectors for each G(x) matrix. These
% vectors correspond to sensitivity maps at the x location.
%
% Input parameters:
% --kCal: N1_cal x N2_cal x Nc block of c... |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.