sha256 stringlengths 64 64 | language stringclasses 27
values | size int32 1 491k | lines int32 1 21.8k | content stringlengths 1 200k |
|---|---|---|---|---|
7785c79618c010fc405e3aec4334441874e66193737cd4f0e4cb3edb3374ecfc | SAS | 949 | 62 | %macro AddRowNumber4Com_Vars(dsdin,Com_Vars,desending_or_not,dsdout);
%let vars=%sysfunc(prxchange(s/ +/%str(,)/,-1,&Com_Vars));
%put Your input Com_Vars are &vars;
proc sort data=&dsdin;
by &Com_Vars;
run;
data &dsdout(drop=tag);
length tag $200;
retain tag '' ord 0;
set &dsdin;
if _n_=1 then do;
tag... |
b6c5fc1c991a975ce05e22a9dc201863c7902973b201477c57cf4c26cf4c25db | SAS | 949 | 48 | %macro make_dbsnp_db(
dbsnp_fullpath,
outlib_path,
outdsd
);
libname O "&outlib_path";
%File_Head(filename="&dbsnp_fullpath",n=10);
%ImportFilebyScanAtSpecCols(file=&dbsnp_fullpath
,dsdout=O.&outdsd
,firstobs=1
,dlm='09'x
,ImportAllinC... |
8bb50057c762a3725a0563335688b5bd68acaff9835f9dfb4114f5981c54fbdb | SAS | 962 | 30 | /* MACRO %GetVarType --> Calls %GetVarAttrib with specific parameter values
Version: 1.03
Author: Daniel Mastropietro
Created: 18-Nov-2004
Modified: 24-May-2015 (added vartype as LOCAL variable!, previous: 07-Jun-2012)
DESCRIPTION:
Returns the type (character or numeric) of a given variable in a dataset... |
93dd9b14e42eacda926f391408881994d5b512dd73f721ef792f2dcda0287a5f | SAS | 975 | 39 | %macro list_files(dir,file_rgx);
%local filrf rc did memcnt name i;
%let rc=%sysfunc(filename(filrf,&dir));
%let did=%sysfunc(dopen(&filrf));
%if &did eq 0 %then %do;
%put Directory &dir cannot be open or does not exist;
%return;
%end;
%do i = 1 %to %sysfunc(dnum(&did));
%let name=%... |
0caa1903323b46ece83529ad7263d8e5c50e6939934f487877d8ae4007fb6731 | SAS | 977 | 40 | %macro replacestrinfile(file,strrgx,newstr4rep,casesensitive=0,outdir=,outprefix=modified.,firstobs=1,obs=max);
filename IN "&file";
%if "&outdir"="" %then %do;
%let outdir=%curdir;
/* %let outdir=%sysfunc(getoption(work));*/
%end;
filename OUT "&outdir/&outprefix.&file";
data _null_;
... |
bdc747a74752866b9e702704b30eb67a835597612b5546a90625de5198b11c82 | SAS | 992 | 41 | %macro AddNullData2SeparateDsd(dsd,FrtSrtVar,SecSrtVar,Num4AddedNullLines,AddVar4output,Value4AddVar,dsdout);
proc sort data=&dsd;by &FrtSrtVar &SecSrtVar;
data &dsdout;
set &dsd;
if not last.&FrtSrtVar then output;
else do;
do i=1 to &Num4AddedNullLines;
if i=1 then output;
else do;
&AddVar4output=&Value4AddVa... |
fef2021dc20ef06a1e9263c6e033f1cff4a33d890e98be254fd2bdf719fb3aca | SAS | 1,009 | 55 | %macro number_rows_by_grp(
dsdin,
grp_var,
num_var4sort,
descending_or_not,
dsdout
);
%if &descending_or_not %then %do;
proc sort data=&dsdin;
key &grp_var &num_var4sort/ descending;
run;
%end;
%else %do;
proc sort data=&dsdin;
key &grp_var &num_var4sort;
run;
%end;
proc sort data=&dsdin;by &grp_va... |
1a0378552a5dbe8887595b68dda2b3906d38939a29109aadcae2bb134410d829 | SAS | 1,019 | 30 | %macro get_filenames(location=,dsd_out=filenames,match_rgx=);
filename _dir_ "%bquote(&location.)";
data &dsd_out(keep=memname);
length memname $1000.;
handle=dopen( '_dir_' );
if handle > 0 then do;
count=dnum(handle);
do i=1 to count; ... |
d081886e1177a99281aee73435b03a193616bbd56454e6c2e76f894b4b5dce0f | SAS | 1,021 | 49 | /* Apply variable names, labels and formats
from dataset indsd to target_dsd */
*options mprint;
%macro App_Dsd_Lbl_Fmt_To_Other_Dsd(indsd,target_dsd);
%let dsd_name=%scan(&indsd,-1,'.');
%let dsd_lib=%scan(&indsd,-2,'.');
proc sql noprint;
create table temp as
select name,label,format
from dictionary.colum... |
bd1bcfa9a2baca7796648ff0ad5b1d84d07c291f5d21a9f02046b210a2841e99 | SAS | 1,022 | 43 | %macro protein_coding_genes_close2gene(
gtf=gtf_hg38,
chr4gene=2,
dist=1e6,
genesymbol=SF3B1,
outdsd=combined_genes_by_dist,
macrvar4genes=nearby_genes /*Create a macro var to save these genes separated by space*/
);
%global ¯var4genes;
data input;
set >f;
where chr=&chr4gene and ensembl_transcript con... |
e5d0df68ba49325ecd697c11cb3184c48ff15659b5cf42a6927b965c49f0c8a4 | SAS | 1,022 | 36 | %macro import_all_bims(
dirpath=.,
outdsd=all_bims,
debug=0
);
%get_filenames(location=&dirpath,match_rgx=bim);
data &outdsd (drop=fname filepath memname t);
set filenames;
filepath = "&dirpath"||"\"||memname;
*Need to add truncover to infile data successfully;
%if &debug=1 %then %do;
infile dummy ... |
1e67f6d78d48129786021fe34e13ce86c10bc9f3c3d501abb563f5f4f389f85a | SAS | 1,032 | 61 | %macro QueryInterVar4MultVars(
query_dsd=,
chr_var=,/*chr var in numeric notation*/
pos_var=,
ref_var=,
alt_var=,
build=hg38,
dsdout=results4allvars
);
data _null_;
set &query_dsd;
n=_n_;
rc=dosubl('%QueryInterVar(chr='||&chr_var||',pos='||&pos_var||
',ref='||&ref_var||',alt='||&alt_var||',build='||"&build"||
',dsdout... |
52861e7a07f4928ce6e23c2214d92538496206ffc50874c1bf593b7f1ceb6680 | SAS | 1,042 | 36 | %macro print_text_as_title(
text=%str(Put your text here to print.)
);
proc odstext;
p "&text" /style=[color=darkred fontsize=14pt
just=center fontfamily=arial];
run;
*The following codes do not work very well;
/* data _tmp_; */
/* length _line_ $32767; */
/* _line_="&text"; */
/* output; */
/* pro... |
d4b847ee029117be0146d2ddee158893af2770e74b2c6054ca866ecd59cd7e0b | SAS | 1,045 | 61 |
%macro fmt_num_with_char(dsdin,numvar4fmt,charvar4fmt,fmt_output_name);
/*
*No need this;
proc freq data=&dsdin;
table &var4fmt/noprint out=uniquevalues;
run;
*/
proc sort data=&dsdin out=uniquevalues nodupkeys;
by &numvar4fmt;
run;
data fmtdsd;
set uniquevalues;
retain fmtname "&fmt_output_name" type '... |
37bd9d00aa45c3f69e86171dc2c402de0022ba108782ad5e412c6d6e0e3cfe5e | SAS | 1,054 | 39 |
%macro RandBetween(min, max);
%local min max rnd _unif_num_ _rnd_;
%let _unif_num_=%sysfunc(ranuni(0));
%let _rnd_=%sysevalf((1+&max-&min)*&_unif_num_);
%let rnd=%sysfunc(floor(&_rnd_));
&rnd
%mend;
/*Demo codes:;
*Note: rand('norma') does not work when using the macro by other macro!;
*So the macro has ... |
a1e2caae8813337f8f39567ee2456b5a51e3157e74ac425089495472f9c0cc0a | SAS | 1,063 | 42 |
%macro SplitDsdIntoMultiDsdsByNumGrp(dsd,numgrpvar,newdsd_prefix);
%local grp_var_list ii;
proc sql noprint;
select distinct &numgrpvar into: grp_var_list separated by ' '
from &dsd;
%put group vars: &grp_var_list;
*Do not use macro var i here, as it was used by Rename_Add_Prefix4All_Vars;
*Which... |
7b0f8b4bfa68b13e99a2e08b915bea11bf307e052f7269ac5106568d978b2971 | SAS | 1,064 | 74 | %macro chr_format_exchanger(dsdin,char2num,chr_var,dsdout);
data &dsdout(drop=_chr_);
set &dsdin(rename=(&chr_var=_chr_));
%if &char2num %then %do;
if lowcase(_chr_) in ("chrx","x") then do;
&chr_var=23;
end;
else if lowcase(_chr_) in ("chry","y") then do;
&chr_var=24;
end;
else do;
/* ... |
d6adc3fdeba33c7760db29d6c582efa8dab247e69967b49faf3bc875a3db787e | SAS | 1,075 | 47 | /* Apply variable names, labels and formats
from dataset indsd to target_dsd */
*options mprint;
%macro KeepColNotMatchingRgx(indsd,Rgx,outdsd);
%let dsd_name=%scan(&indsd,-1,'.');
%let dsd_lib=%scan(&indsd,-2,'.');
proc sql noprint;
create table temp as
select name,label,format
from dictionary.columns
w... |
7df39a6cf775af0427603388c50c07956a174565ce1c2052701384f072dc29ba | SAS | 1,076 | 33 | %macro varexist
/*----------------------------------------------------------------------
Check for the existence of a specified variable.
----------------------------------------------------------------------*/
(ds= /* Data set name */
,var= /* Variable name */);
/*---------------------------------... |
764ffee398f784fd86a686e8a59c808f0c1cf491010244a300d13e5f011425bb | SAS | 1,078 | 42 | %macro AddSpaces4str(str=test_str,add2end=1,nspaces=3,char4space=-);
%local _ns_ _str_;
%let _str_=&str;
%do _ns_=1 %to &nspaces;
%if &add2end=1 %then %do;
%let _str_=&_str_%str(&char4space);
%end;
%else %do;
%let _str_=%str(&char4space)&_str_;
%end;
%if &_ns_=&nspaces %then %do;
&_str_... |
422a955e0618eaacfc1b6be6be4f33d476fe27756744c63e79244c6ae2632c4f | SAS | 1,079 | 43 | %macro bed_regions_plot(indata=, yvar=, groupvar=name, startvar=start, endvar=end, linesize=10);
data bed_regions;
set &indata.;
length pos 8;
array p{*} &startvar. &endvar.;
do i = 1 to 2;
pos = p{i};
output;
end;
drop i;
run;
... |
b39d901dd563078f92abf8092cb8fb8bdfed2ed6af8cdfe7d5dc9e535500ad7f | SAS | 1,086 | 40 | %macro iml_PrintDescStats(table);
%local lib dsd;
%if %index(&table,.) %then %do;
%let lib=%scan(&table,1,.);
%let dsd=%scan(&table,2.);
%end;
%else %do;
%let lib=work;
%let dsd=&table;
%end;
proc iml;
start PrintDescStats( tbl );
cols = loc( TableIsVarNumeric(tbl) ); /* get column numbers */
if ncol(cols)=0 then ... |
2fa5b1c8324304c1e6e33e87c6a634f73869592afdcf608b7a20037dcfc807c4 | SAS | 1,097 | 42 | %macro QueryLD_SNPs_at_Haploreg4(
snp=rs2564978,
LDpop=EUR,
ldThresh=0.7,
outdsd=LD_dsd
);
%let query_str=%nrstr(&query=)&snp%nrstr(&ldThresh=)&ldThresh%nrstr(&ldPop=)&LDpop%nrstr(&output=text&submit=submit);
*Note: the important ldPop is required to obtain all high LD SNPs for the query SNPs;
*If no ldPop provided, it... |
ccac2ccae3a0c3ecd23f773c488643a442cf4c9860c41b50e8b5d8d5fc149d9d | SAS | 1,098 | 41 | %macro regress_out_covar_effects(
dsdin=,/*Input dsd*/
dsdout=,/*output dsd*/
varadjlist=,/*char covars used to adjust effects; these char covars are required to be put into the class statment*/
modeladjlist=,/*all covars, including char and numeric covars in a format for the model statment of proc glm; ensure the ... |
430466a5c165966862c383ce821e9c2196a01165f9c47db53a30272921c39fcb | SAS | 1,099 | 38 | /*An alternative way to create new directory;
%macro Create_Dir(dir=) ;
options noxwait;
%local rc fileref ;
%let rc = %sysfunc(filename(fileref,&dir)) ;
%if %sysfunc(fexist(&fileref)) %then
%put NOTE: The directory "&dir" exists ;
%else
%do ;
%sysexec md &dir ;
... |
d8d2648a3adfa002920c5109db0a164a1b9ce3db3446dd637f5e4869f2ae950b | SAS | 1,099 | 47 | %macro Check_VarnamesInDsd(indsd=,Rgx=.,exist_tag=);
%global &exist_tag;
%let &exist_tag=;
%put Your input sas dsd is &indsd;
*Add quit here to quit process that may prevent the script from running proc contents;
quit;
%put Going to run proc contents to obtain variable list!;
proc contents data=&indsd out=_t... |
404787dd151619aecec8a8e9af67964b534bd5d801c3eefb919a66e07039dd98 | SAS | 1,100 | 38 | %macro tabulate4bins(dsd,byids,target_var4bin,bins,dsdout);
%let ncutoffs=%numargs(&bins);
/*change byids for proc sql;*/
%let _byids_=%sysfunc(prxchange(s/\s+/%str(,)/,-1,&byids));
%let i=1;
%let bin=%scan(&bins,&i,%str(' '));
%let i=2;
%let format_string=%sysfunc(cat(low-,&bin)) = "low>=&bin";
%put &format_st... |
9cccb29b53f5e2cc1eb7c53dd16f0c45ad9eecb2221a19041533023ee2383bca | SAS | 1,103 | 32 | %macro keep_uniq_lst(
name,/*macro variable name that will be created to include the unique elements in the input variable lst
note: for duplicates, the last element will be kept in the final macro var!*/
lst /*Input list containing duplicates or multiple spaces; note: spaces will be trimed!*/
);
*Need to asign t... |
1809ebc3ece3586ae2c87f1f51ef1d1c943146f808252c953be2f6c0666fa3a1 | SAS | 1,106 | 29 | %macro FileAttribs(filename);
%local rc fid fidc Bytes CreateDT ModifyDT;
%let rc=%sysfunc(filename(onefile,&filename));
%let fid=%sysfunc(fopen(&onefile));
%if &fid ne 0 %then %do;
%let Bytes=%sysfunc(finfo(&fid,File Size (bytes)));
%let CreateDT=%sysfunc(finfo(&fid,Create Time))... |
66e0d988d95a7537b3c82698719706631a0df8ba4f5ffcfe14592ced8fdc649b | SAS | 1,106 | 43 | %macro Remove_dups_in_dsd(dsd,sort_var,key_var,first_or_last4dup,dsdout,sort_var_cutoff_func);
/*sort the values of sort_var and keep all structure with the first or last unique*/
/*values of key_var;*/
/*first_or_last=1 will keep first unique value that sorted ascendingly */
/*first_or_last=0 will keep last unique... |
98a88496c98e302495cad6906f36b3e56c1536d411d9732fc897ebee2cae5e5a | SAS | 1,107 | 47 |
%macro rename_files_in_dsd(dsd,filevar,indir,newfilevar);
*Remove duplicates in newfilevar;
proc sort data=&dsd nodupkeys;
by &newfilevar;
run;
proc sql noprint;
select count(&filevar) into: n
from &dsd;
proc sql noprint;
select &filevar into:v1-:v%sysfunc(left(&n))
from &dsd;
proc sql noprint... |
3b29dac9da786019eba16e817ae405b3bfa62d212c8e3dbf28282f018682a0e8 | SAS | 1,115 | 35 | %macro dwn_http_file(httpfile_url,outfile,outdir);
%if "&outfile"="" %then %do;
%let outfile=%sysfunc(prxchange(s/.*\///,-1,&httpfile_url));
%end;
%if "&outdir"="" %then %do;
*%let outdir=%curdir;
%let outdir=%sysfunc(getoption(work));
%end;
%put Downloaded file will be put into here:;
%put &outdir/&outfile;
filename o... |
89a2d67b59ff0e1213a21189296a6ee05b1135295f9ff46e491fc4b7521bc506 | SAS | 1,125 | 49 | %macro Query_GTEx_eQTLs4Genesymbol(
ensembl_gene_id=ENSG00000128383.12,/*For Apobec3a*/
outdsd=gene_eqtls
);
*https://gtexportal.org/api/v2/redoc#tag/Static-Association-Endpoints/operation/get_significant_single_tissue_eqtls_api_v2_association_singleTissueEqtl_get;
*for Apobec3a: ENSG00000128383.12;
%let url_link=%str... |
4e37b547e3db4d597cde1bcf59fd90bdcf2e5e085b73164e5923f53fde39a135 | SAS | 1,129 | 33 | %macro FileOrDirExist(dir) ;
%LOCAL rc fileref return;
%*arbitrarily assign value 0 to output if dir is empty;
%*This will avoid of error message issued by fexist later;
%if %length(&dir)=0 %then %do;
0
%end;
%*It is necessary to add else do macro statement here, otherwise, even if... |
a06f0338548f257168ec97cc3107cef69982f1632185547d35069903dbbf27f9 | SAS | 1,134 | 54 | %macro get_nearby_genes_by_dist(
gtf,/*GTF sas data set generated by the macro get_genecode_gtf_data*/
dist=5e4,
outputdsd=combined_genes_by_dist,
output_cnts4genes=gene_cnts,
max_gene_cnts4histgram=100
);
data gtf_hg38;
set >f;
run;
data gtf_hg38;
set gtf_hg38;
where type="gene";
keep genesymbol chr st ... |
310bdce65906852b6a9182aacd9ac055004944da7922e74075c756014c276c0e | SAS | 1,148 | 51 | %macro RunMacrosRepeatedly(Mvar_dsd,Mvar,MacroFullCommand);
proc sql noprint;
select count(unique(&Mvar)) into: tot
from &Mvar_dsd;
select unique(&Mvar) into: v1 -: %sysfunc(catx(%str(),v,&tot))
from &Mvar_dsd;
%do i=1 %to &tot;
%put &&v&i;
%let RepeatVar=&&v&i;
%str(
data _null_;
... |
a24f3a516672bb255902fbf9ec15cb9241b8cc4514fddfad4564a37cbd256952 | SAS | 1,156 | 39 | /*
Here is another version of David's macro. It eliminates the need to place
surrounding symbols around the list. Some may see this as advantage, while
others may think it a disadvantage. It also allows the separator to be any
of the standard ones accepted by SCAN and used in a legal manner ( i.e. no
use of 1(2... |
1430bf9eaffba4213220c64f93338f08e1783c6a0f0a0e0cd5d130d5b50d362f | SAS | 1,162 | 38 | %macro Union_Selected_Data_In_Lib(lib,excluded,dsd_not_contain_rgx,dsdout);
%let re=%sysfunc(prxparse(s/ /" "/oi));
%let rm_list=%sysfunc(prxchange(&re,-1,&excluded));
%let n_rgx=%eval(%sysfunc(count(&dsd_not_contain_rgx,%str( )))+1);
%syscall prxfree(re);
/*default memname char(32), which may be too short*/
proc... |
64ef5f5206a8579ee3c7513332246683fa92d9617848a604c50558c5cb3a4388 | SAS | 1,171 | 51 | %macro GetZIPContents(zip,dsdout);
*this script is only able to get contents of ZIP but not gzip;
*as gzip can not be opened directly!;
%let rc=1;
filename inzip ZIP "&zip";
/* Read the "members" (files) from the ZIP file */
data &dsdout(keep=memname isFolder);
length memname dirname $500 isFolder 8;
fid=dopen("inzip... |
06211980a634bb5f457840e433a78beff11667c12b8dfc79bb10e598d5196d7a | SAS | 1,172 | 60 | %macro Zscore4matrix(dsdin
,rowwide
,ByVar4rowwide
,dsdout
);
%if %eval(&rowwide=0) %then %do;
/*colwide z-score*/
proc standard data=&dsdin mean=0 std=1 out=&dsdout;
var _numeric_;
run;
%end;
%else %do;
/*row-wide z-score*/
proc transpose data=&dsdin out=&dsdin._tmp;
var _numeric_;
by &ByVar4rowwide n... |
6a175511f06efe6ffc42a1f8c4f486bb4088c7a35b7dd609297c4947ef96ed74 | SAS | 1,172 | 41 | *Note: if sep=%str(,), the macro var list needs to be bquoted!;
%macro select_element_range_from_list(
list=,
st=1,
end=, /*If empty, the total number of elements will be used by it*/
sublist=sublist,/*Output a global macro variable for using by other SAS codes*/
sep=\s /*Perl regular expression for target separ... |
b2519789067e10abf900692bc291d5f2d7c65879cef3e83e888e4f6cb0fc8f62 | SAS | 1,173 | 41 | %macro longdsd2matlabmatrix(dsd,var_row,var_col,data_var,value2asign4missing,dsdout,outdir4matrix);
proc sort data=&dsd;by &var_row &var_col;
proc transpose data=&dsd out=&dsdout(drop=_name_);
var &data_var;
by &var_row;
id &var_col;
run;
data &dsdout;
set &dsdout;
array x{*} _numeric_;
do i=1 to dim(x);
... |
172271883dfb18fd317a665102d4299195ae101642b9b6ee7db8a927bb3dd5a1 | SAS | 1,176 | 45 | %macro Bed2SAS_DB(Bed_Dir,Regex4bed,Libname4out,outdsd);
%ImportAllFilesInDirbyScan(filedir=&Bed_Dir
,fileRegexp=&Regex4bed
,dsdout=reg_dsd
,firstobs=0
,dlm='09'x
,ImportAllinChar=1
,MissingSymb=NaN
... |
6ce45ff5ec65ad3f4ee5d290b0bdb254e87a8c1421969d68bab29ddc5a87be70 | SAS | 1,176 | 41 | %macro ParseEnrichedGenesFromWebgestalt(enrichment_file,dsdout);
*typical Webgestalt file: enrichment_results_wg_result1642738253.txt;
proc import datafile="&enrichment_file"
dbms=tab out=&dsdout replace;
getnames=yes;
guessingrows=1000;
run;
data &dsdout (keep=gene description FDR);
*use strict FDR < 0.01;
... |
345c58296f2758b96ff26b5adaaae1844c1451d4eabedce2aebc232bedc920ea | SAS | 1,182 | 38 | %macro have_dups4var(
dsdin=,
var=,
dup_indicator= ,/*A name for a global macr var to indicate whether there are dups in var,
the value of which will be 1 or 0*/
dupdsdout=dups,/*A sas dataset containing exisiting duplicates*/
nodupdsdout=nodups /*A sas dataset containing non-duplicates*/
);
%global &dup_indic... |
132ed19419ac4e705ed8ce9024f53d982d8bac75a43118c07e309d37b2689102 | SAS | 1,191 | 42 | %macro curdir;
/*----------------------------------------------------------------------
Returns the current SAS directory physical name.
----------------------------------------------------------------------*/
/*----------------------------------------------------------------------
Originally developed by Tom Hoff... |
66c2661f62b313de50a7b16473d01d4c4a018250335b1b9b3c16e4c3b3472702 | SAS | 1,192 | 50 | %macro Scaleup_nrow_ncol(dsdin,row_var4row,row_var4col,value_var,dsdout);
%if "&value_var"="" %then %do;
%let value_var=*;
%end;
data tmp;
set &dsdin;
proc sort data=tmp nodupkeys;
by &row_var4row &row_var4col;
run;
/*Important to get unique values for row and col individually*/
proc sql;
create table t... |
1810dd0ab78abf46eb8bd711bb3e77f13110d2315f7c3da7ebca690b09bf57ff | SAS | 1,198 | 36 | %macro parse_macro_used_macros(macro_filepath,dsdout);
data &dsdout;
retain macro_i 0;
length file $1000. Macro_Info $1000.;
infile "¯o_filepath" lrecl=10000 obs=max;
input;
Macro_Info=_infile_;
x=Macro_info;
*It is important to stop the processing when encounter these Demo codes;
if prxmatch("/Demo/i",M... |
1b1792d06f4cc4c0250c22c7f4a8dc2efeae5bafb69d522e006089ac5ee81fff | SAS | 1,218 | 57 | %macro calc_pairwise_LD_among_1KG_pops(
snp1=,
snp2=,
outdsd=out,
pop=GBR /*Provide one population of the 1000 Genome phase 3 populations: CHB, CEU, ...;
if empty, it will query all populations and calcuate pairwise LD;*/
);
filename G temp;
%if %length(&pop)>0 %then %do;
*Query in one population;
%let ... |
d2d0ba939865b53e683a87406a74747fccbd118669791a05d242ea4909a75eb8 | SAS | 1,241 | 46 |
%Macro Import_Space_Separated_File(abs_filename,firstobs,getnames,outdsd);
filename outfile "tempdata.txt";
data _null_;
retain n 0;
infile "&abs_filename" lrecl=32767 firstobs=&firstobs end=end;
file outfile;
input;
_infile_=strip(_infile_);
_infile_=prxchange("s/\bNA\b/./",-1,_infile_);
_infile_=compbl(_in... |
91a61633ab3d843543be7487a3e4ff714ffa6f4ec43728d1a7ff33d7b8be7308 | SAS | 1,245 | 45 |
/*%let sysparm = name1=value1,name2=value2,name3=value3 ;*/
/*
Accepts multiple name value pairs e.g
-sysparm ‘name1=value1,name2=value2’
N.B.: &name1 &name2 are %global
sysparm must be put at the end of command;
*/
%macro multi_sysparm;
data _null_;
length sysparm express param value $ 200;
sys... |
5eeaae3bd59d45e8a7841ed8f2c3a8cabaaf7fc2e4b17af8e229b7e3b5841967 | SAS | 1,246 | 59 | %macro random_subset_cols4dsd(
dsdin,
rgx2matchcols,
rgx2fixedcols,
rnd_pct,
dsdout
);
proc contents data=&dsdin out=sampling noprint;
run;
*get fixed column names and saved them into a macro var;
*These fixed columns usually are few, so the length of macro var will not be truncated;
proc sql noprint;
select name int... |
2e78bab2e4580f947a49b1913ef0887309e1ef1efdfd84632d2d2836377e99df | SAS | 1,248 | 61 | %macro rename_sas_dsd(
dsdin,
dsdout
);
*rename the &dsdin as &dsdout;
%if %index(&dsdin,.) %then %do;
%let _dsdin_=%scan(&dsdin,2,.);
%let _inlib_=%scan(&dsdin,1,.);
%end;
%else %do;
%let _dsdin_=&dsdin;
%let _inlib_=work;
%end;
%if %index(&dsdout,.) %then %do;
%let _dsdout_=%scan(&dsdout,2... |
52c6bb5b4ab2ca761d7dc8530d72a645220721be4e075aa6b067424f948145ec | SAS | 1,248 | 49 | %macro boxgrpdisplaysetting(
boxwidth=0.8,
by_cluster=1 /*If boxplots are not plotted in sgpanel by subgrps, such proc sgplot, please provide value 0 to draw boxplot not in cluster*/
);
%if &by_cluster=1 %then %do;
%str(
groupdisplay=cluster boxwidth=&boxwidth fillattrs=(transparency=0.5)
whiskerattrs=(patter... |
465d09606a40e2434290cb31201964941d611c71a803f5f97113d13c26d457f0 | SAS | 1,256 | 56 | /* Apply variable names, labels and formats
from dataset indsd to target_dsd */
*options mprint;
%macro KeepColMatchingRgx(indsd,Rgx,outdsd,insensitive);
%let dsd_name=%scan(&indsd,-1,'.');
%let dsd_lib=%scan(&indsd,-2,'.');
%if (&insensitive eq 1) %then %do;
%put Rgx will be case insensitive;
%let Rgexp=/&rg... |
d79ac03bb8a2e36829a761151e8fa87c7bcf4dcc83137a36d2d766c28c9313fe | SAS | 1,275 | 45 | %macro filter_longform_dsd4matrix(
dsdin=,
var4matrix_row=, /*target variable that will be put into row-wide for a matrix*/
var4matrix_col=, /*target variable that will be put into column-wide for a matrix*/
value_var4matrix=, /*Numeric value variable for filtering*/
value_cutoff_fun=min,/*SQL group functions... |
b6ce048105e0d47eb5c4e0d0cc5152820b94f59dd0ec5f4753a13ef7cf8f8195 | SAS | 1,283 | 39 | %macro gnomad4proteinpaint(dir4gnomadcsv,gnomadcsv);
x cd "&dir4gnomadcsv";
%let gnomad_file=&gnomadcsv;
proc import datafile="&gnomad_file" dbms=csv out=gnomad replace;
getnames=yes;guessingrows=10000;
run;
data out(keep=chr Protein_st Vtype);
length chr $100.;
set gnomad;
chr=compress(catx(":",catx("","chr",... |
49c62973203aec2e885429347f774bd47cbdca9a4eeb2e898214481e3646c185 | SAS | 1,286 | 52 |
%macro listfiles2dsdInUE(dir,filergx,outdsd);
*Change dir into macro dir;
data _null_;
rc=dlgcdir("&dir");
put rc=;
run;
*For UE;
*%include "/folders/myshortcuts/zcheng/Macros/list_files.sas";
*%include "/folders/myshortcuts/zcheng/Macros/del_file_with_fullpath.sas";
*For SAS onDemand;
*%let uedir=%sysfu... |
1bc420e88d87eed5f4c1fa532a23095ecda15e5950aa6706d2bbb0ffae6d5958 | SAS | 1,295 | 45 | %macro Merge_Dsd_In_Lib_Rgx(lib,excluded,dsd_contain_rgx,comm_vars_rgx,dsdout);
%let n_rgx=%eval(%sysfunc(count(&dsd_contain_rgx,%str( )))+1);
/*default memname char(32), which may be too short*/
proc sql noprint;
create table temp_xyz as
select *
from dictionary.tables
where libname=upper("&lib");
%if "&e... |
58a8c28ae7166ca21d16d8f449ef6c40aa283ef9d486ff517e3f5613355b486a | SAS | 1,299 | 49 | %macro Import_VCF(dir=,filename=,dsdout=);
options compress=yes;
filename vcf "&dir/&filename";
*Get the total number of header lines;
*The last header line is used as header in proc import;
data _null_;
infile vcf lrecl=32767 length=linelen;
input header $varying32767.linelen;
n=_n_;
if substr(header,1,1)="... |
e41b1e37cfd95d9c026197634ffefde521a9010a1ad7fea0f4a51f5b61996dd8 | SAS | 1,299 | 45 | %macro Union_Data_In_Lib_Rgx(lib,excluded,dsd_contain_rgx,dsdout);
*Asign fake value to exclude dsd if the var excluded is empty;
%if %length(&excluded)=0 %then %let excluded=_____________;
%let n_rgx=%eval(%sysfunc(count(&dsd_contain_rgx,%str( )))+1);
/* %syscall prxfree(re); */
/*default memname char(32), which may... |
2fe6f0462e57114e96a38ab2ea204091fef89faaa22a3d3acbc8e21f997202df | SAS | 1,304 | 61 |
%macro cp_files_in_dsd(dsd,filevar,indir,outdir,newfiletag);
proc sql noprint;
select count(&filevar) into: n
from &dsd;
proc sql noprint;
select unique(&filevar) into:v1-:v%sysfunc(left(&n))
from &dsd;
%if (&newfiletag ne and &indir eq &outdir) %then %do;
%do i=1 %to &n;
%cp(f=&&v&i,fdir=&indir... |
776cd086592ed2bde0d6d1427934b7ecc139d7bcd3d92168692ff48d4059082f | SAS | 1,310 | 48 | %macro Query_Large_File_With_Idx(idx_var,rownames,dsdin,dsdout);
options nonotes nosource;
%put Query_Large_File_With_Idx(idx_var,rownames,dsdin,dsdout);
%put 'Query rownames are: ' &rownames;
%let num=1;
%let rowname=%qscan(&rownames,&num,%str( ));
%do %while(&rowname ne);
%if (&num=1) %then %do;
/* Pay atten... |
59d54076618f9612ae838c8acb445b0dbf17f12d6f891614ff6bcc6ed28435ba | SAS | 1,318 | 58 | /* Apply variable names, labels and formats
from dataset indsd to target_dsd */
*options mprint;
%macro Rename_Del_Rgx4All_Vars(indsd,Rgx);
%let dsd_name=%scan(&indsd,-1,'.');
%let dsd_lib=%scan(&indsd,-2,'.');
proc sql noprint;
create table temp as
select name,label,format
from dictionary.columns
where ... |
beeb6b34aed1e8892793db74204a3ec126293161b777c0bd5b1a11204d274433 | SAS | 1,329 | 58 | %macro cp(f,fdir,out,outdir);
%let filrf=myfile;
%let rc=%sysfunc(filename(filrf, &fdir\&f));
%let cpfileref=myfilecp;
%let rc1=%sysfunc(filename(cpfileref,&outdir\&out));
%let fid=%sysfunc(fcopy(&filrf,&cpfileref));
%put &fid;
%if &fid=0 %then %do;
%put "copy it successfully for" &fdir\&f ", which is saved ... |
b294922ccf57f32aa82336ac9fab3c29187848143d25501c82727a749cf66314 | SAS | 1,333 | 44 | %macro ImportDsd_via_Proc_Import(filepath,
_kept_variables,
_getnames_yes_no,
_datarow,
_dbms,
_force2Num,
dsdout);
*Make Linux and WIN usable filedir;
%let filepath=%sysfunc(prxchange(s/\\/\//,-1,&filepa... |
0d6f052c3d942b0c9ef86d320a86d2bfd12a3ca93ecf468cac68f694d2e5eb62 | SAS | 1,334 | 60 | %macro allele_columns2geno(
dsd=,
cols4alleles=4-9,/*Use %bquote if containing comma among these column numbers!*/
outdsd=out
);
%pull_column(dsd=&dsd,dsdout=&outdsd,cols2pull=&cols4alleles);
*get other columns not matching with these pulled columns;
%pull_column(dsd=&dsd,dsdout=&outdsd._,cols2pull=&cols4alleles... |
fb29c55f063e823b83e90fbc9aabec104e30a9c440eb38457400a7f46deb884a | SAS | 1,339 | 55 | %macro pull_column(dsd,dsdout,cols2pull,exclude_pulled_cols=0);
%check_col_orders(dsd=&dsd,colorder_info_out=colinfo,print_colobs=0);
proc sql noprint;
select count(*) into: tot
from colinfo;
select NAME into: v1 - : v%sysfunc(left(&tot))
from colinfo;
*replace numbers with linker to consective numbers;
... |
99fee910f1dfea7935c7c7e4c76997914699fbf571b9a2ccc12b506c287df90c | SAS | 1,349 | 44 | %macro scale_nums_in_list(/*Note that the input list with or without double quotes should be delimited by space*/
list,
factor,
contain_double_quote=1
);
%local _list_ _a_;
%*remove double quotes if there;
%if &contain_double_quote=1 %then %do;
%let list=%qsysfunc(prxchange(s/" "/ /,-1,&list));
%let list=%... |
a7a5b3125d0cb7abe2c9708a901c3ecd4ed61c79d03e6b0adad05db1f509dc57 | SAS | 1,351 | 40 | %macro squeez_single_num_var_length(
dsdin,
/*Note: the var in the dsdin will be squeezed, which means the output dsd would be dsdin*/
var);
%put going to reduce dsd size by using length command;
%let size=%FileAttribs(%sysfunc(getoption(work))/&dsdin..sas7bdat);
%put unreduced dsd size is &size Mb;
data _null_;... |
9ef344a91ef4036d260208351bab0302d808954eb2d65842eaf9523127ead458 | SAS | 1,360 | 73 | %macro GetNumGeno4VCF(
vcf_file=,
dsdout=NumGeno
);
*Get the total number of header lines;
%Header4VCF(
vcf_file=&vcf_file,
global_header_num=vcf_header_num,
global_colnames=vcf_colnames,
global_vcfcolnums=vcfcolnums
);
filename g "&vcf_file";
%let numofsample=%sysevalf(&vcfcolnums-9);
data &dsdout... |
481e03cbfe916e1e0e4e701d07f6c7a0edf58e121f577eb679f117e2de6fa0f8 | SAS | 1,361 | 55 | %macro import_fasta_like_file(
fasta_like_file,/*A file contain data like that of fasta*/
header_start_char,/*regular expression to match the start chars*/
outdsd,
onelinemode=1
);
/*clear and create new temp file*/
/*filename FT15F001 clear;*/
filename FT15F001 "&fasta_like_file";
/*Import data using parmcard... |
bf31429bdf11f216d5303834d533887ab4afb7998f7228630212831e93439c88 | SAS | 1,368 | 49 | %macro Rename_vars_with_info_from_dsd(
dsdin,
var_info_dsd,
old_var_info,/*a variable containing old variable names in the dsd var_info_dsd*/
new_var_info,/*a variable containing new variable names for renaming the old variable names
in the dsd var_info_dsd*/
outdsd);
proc sql noprint;
select &old_var_info,&n... |
5e684073e4e7b7a4deedae2a15586c41162344380ddd3bd28da8560e33ee3db9 | SAS | 1,375 | 52 | /* Apply variable names, labels and formats
from dataset indsd to target_dsd */
*options mprint;
%macro Rename_Add_Prefix4All_Vars(indsd,prefix);
*The macro requires to have the input dataset in the format of lib.dsd;
%if %index(&indsd,.) =0 %then %let indsd=work.&indsd;
%put your input dataset is assumed as &ind... |
64079a50a98ef33e8cb3b5fccfd4b709380713cb40b443e7d79c80ff2fdf8fa7 | SAS | 1,384 | 60 | %macro tanspose_table(
indsd=, /*A table with unique rownames and multiple variables for transposing into row-wide*/
rowname_var=,/*a variable name in the input data set to be transposed into column-wide;
Only unique rownames will be kept for transposing*/
column_vars=_numeric_,/*A list of variables that are subjec... |
bdec990c3cba12f7718f9b97cb5ed240ef230aa7fae284728b052944e342b4da | SAS | 1,394 | 41 | /*
data spambase;
%let url=//archive.ics.uci.edu/ml/machine-learning-databases;
infile "http:&url/spambase/spambase.data"
device=url delimiter=',';
input wf_make wf_adress wf_all wf_3d wf_our
wf_over wf_remove wf_internet wf_order wf_mail
wf_receive wf_will wf_peo... |
3c4e407aaab1c7fdfd86ed94447b62acfb6f9ec57ce89a1f79eccb6c0f69b2cc | SAS | 1,398 | 68 | %macro longdsd2struct_dsd(
indsd,
key1st_var,
key2nd_var,
structdsdout,
max_iteration=100 /*the number of times to recursively perform proc sql to lookup these keys*/
);
*remove duplicates and two keys are the same records;
proc sort data=&indsd(where=(&key1st_var^=&key2nd_var)) nodupkeys;
by &key1st_var &ke... |
5f5cce5f354c3163cf3930696fd7296ef4c0ed76590e4e464b713a3d9b2c9317 | SAS | 1,412 | 57 | %macro ImportGeneLevelASE(filenames,dsdout,Reads4AB);
*Read cutoff of two haplotypes;
%if &Reads4AB eq %then %do;
%let Reads4AB=20;
%end;
%let i=1;
%let fn=%qscan(&filenames,&i,%str( ));
%do %while (%qscan(&filenames,&i,%str( )) ne);
/*%let outdsd=%sysfunc(prxchange(s/\-/_/,999,&fn));*/
%ImportFilebyScan(fi... |
cbcf12e6c9dae76c380f8d631a34961eaace763a4406c6ba1c02a52c10e59747 | SAS | 1,432 | 78 | %macro groupsummary(
dsdin,
grps,/*grps for the by statement*/
vars4summary,/*Numeric vars subject to input functions by group*/
funcs4var, /*functions exclusively for the proc means*/
dsdout,
include_org_dsd_in_output=1 /*add the input dsdin into the dsdout*/
);
proc sort data=&dsdin;
by &grps;
ods selec... |
ce01552c034140229cba2bd7a92dfb9243ef8e64e5f19d2c4e79ea612628576b | SAS | 1,450 | 46 | %macro union(dsn1=, /*Name of the first data set */
dsn2=, /*Name of the second data set */
out= /*Name of combined data set */);
proc contents data=&dsn1 noprint
out=out1(keep=name type length where=(type=2));
proc contents data=&dsn2 noprint
... |
639772df7971ec8cd90e2ae70576b1ee23cbd91c3213c95c957026f508ee478b | SAS | 1,457 | 45 | %macro StandardizeVarscanIDs(VarscanID_dsd,VarName,outdsd);
data &outdsd;
length _chr_ $5.;
/*set &VarscanID_dsd(keep=&VarName);*/
set &VarscanID_dsd;
&VarName=strip(left(&VarName));
_&VarName._=&VarName;
if (prxmatch('/[()]/',&VarName)) then do;
/*For Mut: chr22:19111641 ( G->T )*/
... |
68c54bcfde5f1e50c676f37d94340d14ab92af36ae3b0f153d19ecb91e5feb10 | SAS | 1,475 | 68 | %macro check_header_DataRow(
file,
dlm='09'x,
header_rown=1,
data_rown=2,
dsdout=header
);
data &dsdout.1;
length varname $200.;
infile "&file" dsd dlm=&dlm firstobs=&header_rown obs=&header_rown;
input varname @@;
n=_n_;
run;
proc sql noprint;
select max(n) into: tot_headers
from &dsdout.1;
quit;
... |
b2e446d817e1ec78bf81a23c74521e7d26086ee4c046d4bcd699a603ea93f0ef | SAS | 1,475 | 40 |
%macro combo(r)/parmbuff;
%let i=2;
%let things=;
%do %while (%Qscan(&syspbuff,&i,%STR(,%))) ne );
%let p&i="%Qscan(&syspbuff,&i,%STR(,%)))";
%if &i=2 %then %let things=&&p&i;
%else %let things=&things,&&p&i;
%let i=%eval(&i+1);
%end;
%let n=%ev... |
968131521ae08a4b81d587c280fecc16c80176062da0221f35ab7cb663c95c0d | SAS | 1,486 | 81 | %macro SQUEEZE_wide_dsd(
dsdin,
dsdout_prefix,
split_num4vars,
dsdout
);
*Split large wide dsd;
%split_wide_dsd(
dsdin=&dsdin,
dsdout_prefix=&dsdout_prefix,
split_num4vars=&split_num4vars,
dsdout4subdsd=subdsdinfo,
delete_original_dsd=1
);
*Get the total number of vars in the subdsdinfo;
data _null_;
set subdsdinfo en... |
c1f3b5216702cbd611019604dc79f8f9c91c5963280a95b87671d450d86baca5 | SAS | 1,509 | 62 | %macro Header4VCF(
vcf_file=,
/*Create three global macro vars for using by other codes*/
global_header_num=vcf_header_num,
global_colnames=vcf_colnames,
global_vcfcolnums=vcfcolnums
);
filename vcf "&vcf_file";
%global &global_header_num &global_colnames &global_vcfcolnums;
*Reset values of these global mac... |
6c6d154cd46385ab34a2ca41fd187335d3f2484ac2b782fddeeb1a6fe58d26c4 | SAS | 1,516 | 68 | %macro geno2allelecolumns(
dsd=,
cols4genos=,/*such as 4-9 or %bquote(4-7,8); Use %bquote if containing comma among these column numbers!*/
outdsd=out
);
%pull_column(dsd=&dsd,dsdout=&outdsd,cols2pull=&cols4genos);
*get other columns not matching with these pulled columns;
%pull_column(dsd=&dsd,dsdout=&outdsd._,... |
942b8fe324e63abdb712287ba8e0e1564ad864c1d8eebb30a940f28d37f1c294 | SAS | 1,517 | 32 | %macro permute(r) / parmbuff; /* the parmbuff option assigns */
%let i=2; /* the invocation parameter list to the */
%let things=; /* macro variable &syspbuff */
%do %while (%Qscan(&syspbuff,&i,%STR(,%))) ne ); /* scan the syspbuff */
%let p&i="... |
cd0551f923a456345f27ad9c002b046a71088826390956132ef725fb5d114ec0 | SAS | 1,537 | 44 | %macro get_genecode_gtf_data(gtf_gz_url,outdsd);
%let OldOutDsd=&Outdsd;
*If the outdsd contains lib abbreviation;
*It is necessary to generate a gtf dsd in working directory first.;
%if %index(&OldOutDsd,.) %then %do;
%let outdsd=%scan(&outdsd,2,.);
%end;
%let wkdir=%sysfunc(getoption(work));
%let gtf_gz_file=%sysfu... |
0d1eeeb55afb8c5da8ec95304ee476ad18ee8847b873b88dd0ea11eb040858d7 | SAS | 1,539 | 66 | %macro infile_wide2long4sas(
file,/*The first column contain char value, with other columns are numeric*/
dlm,
dsdout
);
filename dsd_hd "&file";
*The best way to infile wide format data into long format data for sas;
data &dsdout;
retain ncols 0;
infile dsd_hd delimiter="&dlm" firstobs=1 obs=max truncover;
... |
288dd5694b2592441cca065bcd2f84d4e9dd27a18e899a895717af17a52e00f3 | SAS | 1,550 | 80 | %macro QureyMetaXcanTWAS4Genes(
metaxcan_twas_file,
ukb_twas_file,
genes,
dsdout,
rawp_cutoff=0.01
);
proc import datafile="&metaxcan_twas_file" dbms=tab out=TWAS replace;
getnames=yes;guessingrows=100000;
run;
proc import datafile="&ukb_twas_file" dbms=tab out=UKB replace;
getnames=yes;guessingrows=100000... |
aca79f024331b331d3b613e0b6e3326faec423347c64db74881573abd99c48f2 | SAS | 1,567 | 39 | %macro permute(r) / parmbuff; /* the parmbuff option assigns */
%let i=2; /* the invocation parameter list to the */
%let things=; /* macro variable &syspbuff */
%do %while (%Qscan(&syspbuff,&i,%STR(,%))) ne ); /* scan the syspbuff */
%let p&i="... |
b4cb80caea1faa5d8037e2d665dac250f00850c889118c539dcd2ca75a373c68 | SAS | 1,573 | 61 | %macro AddMissingTag4Grps(
dsdin=,/*Long format dsd with grp vars and numeric value var*/
grp_vars=, /*Group variables used to stratify numeric variable for missing test;
Note: any numeric variable with missing value in a group will lead to the assigment of
value 1 to the combination of these grp vars, meanwhile, ... |
1ef0b0078916fe8c63e5d6448098acd24e3aa165d917b73e6911a3089a256789 | SAS | 1,582 | 53 | %macro scASE_betabino(
dsdin=x2,
model_var=x , /*Currently it only accept one factor for the model statement*/
subj_var=subj,
read_var=A_cnt,
tot_var=tot
outdsd=nlmParameterEstimates
);
ods exclude all;
*First estimate model parameters using proc fmm with betabinomial model;
/*ods trace on;*/
ods output ... |
2c06eb6ba92d9105674ac337d7cb7969861e2c142425aba9733f4aa6f335d9ac | SAS | 1,585 | 52 | %macro Bim2Annovar(bim_fullpath,dsdout,annovar_input,annovar_dir,annovar_outdir);
data ANNOVAR(drop=A);
length A1 A2 $32767.;*This is for avoiding truncation of large deletion;
infile "&Plink_Bim..Bim" dlm='09'x dsd truncover lrecl=32767 length=linelen firstobs=1;
input;
Chr=input(scan(_infil... |
e067d5e2cfaac487b3facddba3272a0ffb5cf42a5be0a8264e7aa642cebc89de | SAS | 1,586 | 58 | %macro idx4list_in_alphabet_ord(
/*This macro is very useful for obtaining numeric index in an alphabetic sorted list for a query list;
The output idx can be used in a macro loop or in a array at data step!*/
list= ,/*Blank space separated elements*/
outdsd=list_order, /*A sas dataset will be created to contain the... |
483ce7e84a4fc70e4b6bcd800498288183d239d0e4ca75b581124a0be36aa78c | SAS | 1,606 | 73 | %macro QueryGTEx4GeneID(
geneids=Apobec3a Apobec3b,/*For Apobec3a*/
genomeBuild=hg38,/*hg38, but hg19 is not supported by GTEx*/
outdsd=gene_info
);
%let genomeBuild=%str(GRCh38/hg38);
%if "&genomeBuild"="hg19" %then %do;
%let genomeBuild=%str(GRCh37/hg19);
%put The hg19 query does not work right now;
%abor... |
3fe50cbd907bf709eac86bc403e4d46c2a0be4cf86d6f581dbd0df3b1a195f50 | SAS | 1,617 | 71 | %macro char_grp_to_num_grp4dups(dsdin,grp_vars4sort,descending_or_not,dsdout,num_grp_output_name);
%let nvars=%numargs(&grp_vars4sort);
data &dsdout;
set &dsdin;
%if &nvars>=1 %then %do;
grps_output_key=catx(':', of &grp_vars4sort);
%end;
%else %do;
grps_output_key=&grp_vars4sort;
%end;
run;
/*All grp keys a... |
0d16133428f0ffb98d049950a253fc5423e400b8f12b5d380edcabe5a182f445 | SAS | 1,652 | 62 | %macro Prep_numgeno4fisher(
dsin=, /* Input dataset name (already imported) */
snplist=, /* Space-separated list of SNP variable names */
outds=, /* Output dataset for fisher4cntdsd */
byvars=cancertype /* By variables, default as in your code */
);
/* Filter out missing p... |
1bbbe0b647165dadd66b8583d5d20d6aaefe9fcdfa7fc2ad428b273b94e6152a | SAS | 1,662 | 77 | %macro OpenSVG_Printer(
filename=mysvgfilename,
svgfileref=out,
other_paras4ods_graphics=%str( ),
outdir=,/*output svg to the dir; if empty, it will save it
into the dir %sysfunc(pathname(HOME));*/
);
*In Windows, due to sysfunc(pathname(HOME)) only works in Linux;
*the SVG will be failed to be written into the SAS i... |
26a864cb910889c8f93041c6a711951a626b5ecc6c143e112dd03a747212ee45 | SAS | 1,679 | 56 | /*
Here is another version of David's macro. It eliminates the need to place
surrounding symbols around the list. Some may see this as advantage, while
others may think it a disadvantage. It also allows the separator to be any
of the standard ones accepted by SCAN and used in a legal manner ( i.e. no
use of 1(2... |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.