sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
b3bbbc08f7f76c47a2f9b3accf0228b571bd757248c95e23f115d9a5add10d3b | MATLAB | 1,137 | 26 | function phi = rad2deg(phi)
%RAD2DEG returns the given angle in degree
% phi = rad2deg(phi) converts the angle phi given in radians to degree
%
% Input options:
% phi - angle, can be a scalar or matrix (rad)
%
% Output options:
% phi - angle (degree)
%
% See also: deg2rad
% SOFA API - funct... |
c7c8edcf12e364ef4a2665e0b42b493ee7e9d21026572c3be85770890cd9d73e | MATLAB | 1,137 | 41 | % 1D Gaussian filter.
%
% Equivalent to (but faster then):
% f = fspecial('Gaussian',[2*r+1,1],sigma);
% f = filter_gauss_nD( 2*r+1, r+1, sigma^2 );
%
% USAGE
% f = filter_gauss_1D( r, sigma, [show] )
%
% INPUTS
% r - filter size=2r+1, if r=[] -> r=ceil(2.25*sigma)
% sigma - standard deviation of filter
% ... |
e8b74ea40b6ba7af2abd47edb572fa89abc17f9edd72366feb1c1b61f87f6d64 | MATLAB | 1,137 | 39 | function sub = ind2sub2( siz, ind )
% Improved version of ind2sub.
%
% Almost the same as ind2sub, except always returns only a single output
% that contains all the index locations. Also handles multiple linear
% indicies at the same time. See help for ind2sub for more info.
%
% USAGE
% sub = ind2sub2( siz, ind )
%
... |
fbf73f5b2d6a3ba73d1acec8b90235c8a703844b7d95a5cf2ec294ed0515cd5a | MATLAB | 1,138 | 26 | function phi = deg2rad(phi)
%DEG2RAD returns the given angle in radians
% phi = deg2rad(phi) converts the angle phi given in degree to radians
%
% Input options:
% phi - angle, can be a scalar or matrix (degree)
%
% Output options:
% phi - angle (rad)
%
% See also: RAD2DEG
% SOFA API - func... |
039d1bf8d22981e3a9b460b2354f6896028ef1b724ee5f94d3f7cbb4111ce2a8 | MATLAB | 1,139 | 42 | function result = GuessImageMaxValue(im)
% Guess a good maximum value for the display of image im, which is typically
% the first frame of a movie.
% This version improves on the old version by first branching on the class of im.
% In particular GuessImageMaxValue(uint8(0)) => uint(255), not uint8(0).
if isa(im, 'uint... |
05273f420a564425ef3598a64c6ee6007d4558a4c01d223527e6602d34fb328d | MATLAB | 1,139 | 57 | function p=hfo_amp_detector(x,sD,th,fs,fc,Nc)
% function p=hfo_amp_detector(x,sD,th,fs)
% x is the filtered signal in HFO range
% sD is the standard deviation threshold
% th is the amplitude threshold. 4uV default
% fs s the sampling rate
% Fc minimum HFO frequency
% Nc is the min number of threshold crossings. ... |
adc52f30633416f362b7fa9f06b47569ad8ca5665fff114dbdc605c9136296a1 | MATLAB | 1,139 | 39 | function [chk, clusters] = check_spm_mat(mat1,mat2,clusters)
% mat1 is from clusters, mat2 is functional (imgs to extract)
%
% :Usage:
% ::
%
% check_spm_mat(mat1,mat2,clusters)
chk = mat1 - mat2; chk = chk(:);
chk = chk(1:end-1); % eliminate SPM scale factor
chk = any(chk);
if chk
% we need... |
d7ef3bb283cc53735f7b51d7e456fdbd4dfdf014ec3a545830d9dbbbd8879dfe | MATLAB | 1,139 | 40 | function [flag] = VBA_isInRange (X, bounds)
% // VBA toolbox //////////////////////////////////////////////////////////
%
% [flag] = VBA_isInRange (X, bounds)
% check if all elements of X are within bounds
%
% IN:
% - X: matrix, cell array of matrices, or structure to be checked
% - bounds: a 2x1 vector that define... |
c08458ecc2ea16621e1dd03eed0e5e19d82b7387c87d4d82694ab982113a01fd | MATLAB | 1,140 | 29 | function [AllProfiles,AllProfiles_Mean,AllProfiles_STD,AllProfiles_SEM]=...
ImageRotationProfiles(TempImage,CenterCoord,ProfileCoords,DegreeInterval,DegreeRange,RotationMethod)
AllProfiles=[];
for theta=1:length(DegreeRange)
TempAllProfiles(theta).Profile=[];
end
% p = gcp('noc... |
267df4c9ce155f90abf3a768012d16e920ac3490d4fe7efd066a9087e3f9f290 | MATLAB | 1,141 | 26 | function results = SOFAgetVersion(flag)
%SOFAGETVERSION
% version = SOFAgetVersion() returns the version of the SOFA API
% version = SOFAgetVersion('API') does the same.
%
% version = SOFAgetVersion('SOFA') returns the version of the SOFA
% supported by this API.
% SOFA API - function SOFAgetVersion
% Copyright... |
c4b0938402eb0a573b7823d39a5c82d1553bbf51629ae7a61cf3cf3a74c44ee0 | MATLAB | 1,142 | 49 | %% Compare Monte-Carlo and Numerical Integration
% Gelman p95 exercise 3.10.2
%%
% This file is from pmtk3.googlecode.com
function betaMCdemo()
data = [6 4 5 5; 60 40 52 48];
S = 10000;
setSeed(0);
for i=1:size(data, 1)
H1 = data(i, 1);
T1 = data(i, 2);
H2 = data(i, 3);
T2 = data(i, 4);
m1.a = H1+... |
31c4cfd4296b298d83c9411c920d9dfe5dc6b0e955612de48cf0fc14eba5cabd | MATLAB | 1,144 | 64 | %% Minfunc Rosen Demo
%
%%
% This file is from pmtk3.googlecode.com
function demoMinfunc()
figure;
%methods = {'sd', 'csd', 'cg', 'bfgs', 'newton', 'bb'};
methods = {'sd', 'cg', 'newton', 'bfgs'};
[nr nc] = nsubplots(length(methods));
for i=1:length(methods)
subplot(nr,nc,i);
helper(methods{i});
end
printPmtkF... |
8f9220569795481289e03bdc4e589f30686a46ec8294103bed433598c1a78e4e | MATLAB | 1,144 | 38 | %Support function for essential_distMinAnglePair implementing Newton's search
function [tMin,fMin]=essential_distMinAnglePair_dfNewton(m1,p1,c1,m2,p2,c2,tMin,tLow,tHigh)
tolDist=1e-8;
for i=1:100
% d=dfi(m1,p1,c1,tMin)+dfi(m2,p2,c2,tMin);
% dd=ddfi(m1,p1,c1,tMin)+ddfi(m2,p2,c2,tMin);
%The code below u... |
c039b9b757563a0bf068f964c4498ab47508be7f1d7fa668ba9c1aa134088f19 | MATLAB | 1,144 | 36 | %--------------------------------------------------------------------
function y_filt = Zach_MovingAvgFilter_Exclusions(y,span,exclude)
% moving average of the data.
span_halfish=floor(span/2);
exclude=logical(exclude);
y_nan=y;
%set all exclusions as nan as well as a ~half span +/-
for i=1:l... |
ddc9e6b8f9b6d41a1448e9720781e004833e9ff9c4ff00764cf081408b5c58ea | MATLAB | 1,144 | 52 | %% PCA Scree Plot
%
%%
% This file is from pmtk3.googlecode.com
seed = 0; randn('state', seed);
%X=[randn(100,2)+2.*ones(100,2);2.*randn(100,2)-2.*ones(100,2)];
data = loadData('heightWeight'); % data(:,1) = class, 2 = height, 3 = weight
X = data(:,2:3);
X = standardize(X);
figure;
plot(X(:,1), X(:,2), '.');
xlabel... |
e5659971a5ca2f2768e2dd29490a0edb3d7db9d79b195a80d1595ff893f3438e | MATLAB | 1,144 | 48 | function [events] = lan_spkfieldcoh(data, ts, freq, srate, std_thr)
%------- DEPENDENCIES
% - filter_hilbert.m
% - filtfilt.m
% - hilbert.m
%
% IMPORTANT: this function doesn't admit simultaneous continuous data.
% No results are provided if these are found.
%
%------- UNITS
% ts: seconds
% freq: 1/seconds
% srate: 1/s... |
9b60f5eb26d56f06b1156bd4d8c2c28cd5c38ea56a9125cdc9f7de1031ff2aae | MATLAB | 1,145 | 43 | function [S,bEff,Delta] = DWSE(G,tau,b,TR,D,T1,T2)
%
% calculates DW-SE Signal
%
% input:
% G = strength of diffusion gradient (mT/m)
% tau = duration of diffusion gradient (ms)
% b = b-value (ms/um2)
% TR = repetition time (ms)
% D = diffusion coefficient (um2/ms)
% T1 = longitudinal relaxation time (ms)
% T2 ... |
e9962411b18fc0b75a3671c60f696fe3ab2e9b5c0b9cf1136477c91d2f91a586 | MATLAB | 1,145 | 42 | Q = load('/groups/branson/bransonlab/roian/apt_testing/head_tail.lbl','-mat');
%%
nmov = numel(Q.labeledpos);
newnames = cell(nmov,1);
nlabels = zeros(nmov,1);
ddir = '/groups/branson/bransonlab/roian';
expnum = nan(nmov,1);
mousenum = nan(nmov,1);
sz = {};
for ndx = 1:nmov
curmov = Q.movieFilesAll{ndx,1};
curmov... |
45fb019dd94f90f7cbae157521a979b9e684d8e3391a6ee4554e7bc277676c6f | MATLAB | 1,146 | 40 | function vers = eegplugin_PAA(fig, trystrs, catchstrs)
% eegplugin_PAA() - EEGLAB plugin for period amplitude analysis
%
% Usage:
% >> eegplugin_PAA(fig, trystrs, catchstrs)
%
% Inputs:
% fig - [integer] EEGLAB figure.
% trystrs - [struct] "try" strings for menu callbacks.
% catchstrs - [struct] "ca... |
8ee127ad5f8a2ce106634c003b9c7770f917910c07eea9f62f6784da24ea0ce1 | MATLAB | 1,146 | 56 | function paracylTest()
%% Compare the speed of different implementations of the paracyl function
% This file is from pmtk3.googlecode.com
z=-10:0.5:10;
x=-10.5:.5:10;
as = [0.01 0.75 1];
bs = ones(1,4);
compare = true;
if true
tic
outNEG = zeros(numel(as), numel(z));
for k=1:length(z)
for i=1:len... |
9fb6199701aae3f96a24fe3a5540cdedf0bbc3ceb9589175025cb7a50e9e5a12 | MATLAB | 1,146 | 25 | function dataType = convertDataType(charOrClass)
% Convert between a data type character and a MATLAB class name.
% Data types from <http://docs.python.org/2/library/struct.html#format-characters>
persistent dataTypes;
if isempty(dataTypes)
dataTypes = struct('typeChar', {'c', 's',... |
cee3178becd9ea4d31248a15fe71adcb219a8c9c0e7cddd7722c902854afe9e6 | MATLAB | 1,146 | 38 | function h_newGroup3(handles)
global h_img3;
[currentInd, handles, currentStruct, currentStructName] = h_getCurrendInd3(handles);
[fname,fpath] = uiputfile('*.grp','Please specify a group name.');
if fname == 0
return;
else
[pname, fname2, fExt] = fileparts(fname);
if isempty(fExt)||strcmp(fEx... |
cc55a4d5be1164be503ab38c254e5de4451781fa07ebdf0dc12eb94997529c61 | MATLAB | 1,147 | 29 | clearvars
close all
%load('self_intersection_fixtgt_reltgt.mat');
%load('self_intersection_fixtgt_reltgt_vth0.2.mat');
%load('self_intersection_fixtgt_reltgt_vth0.2_1st_half.mat');
load('self_intersection_fixtgt_reltgt_vth0.2_2nd_half.mat');
n_trials = numel(trial_labels_rt);
% making observation matrices
% rows -> ... |
d931bbd9129264dcfb037ab4198a9892ae43fa59a388b4c97526fef180db0987 | MATLAB | 1,147 | 27 | function [XCF,XCF_bounds]=crosscorr_curv_r(curv,r,range_of_Lags)
% range_of_Lags: 'default' or 'full range'
% default use the default range of function crosscorr
% full range use the full range of curve or r.
for w=1:length(r) % num of worms
for n=1:height(r{w}) % num of neurons
for i=1:width(r{w}) % num of... |
a942dd1281ab53c7de6d6c7843b78544655b29d07cb740fc68c72bd78906b5b1 | MATLAB | 1,148 | 54 | function TF = tabularFactorMultiply(varargin)
% Multiply tabular factors
% T = tabularFactorMultiply(fac1, fac2, fac3, ...)
% Each factor is a struct as returned by tabularFactorCreate and has
% fields T, domain, sizes.
%%
% This file is from pmtk3.googlecode.com
if nargin == 1
facs = varargin{1};
else
facs =... |
7abda504145a0494d475d78dde1bd20babf8d6295bfd6476e78d01158f3ceff4 | MATLAB | 1,149 | 47 | %
% Copyright (c) 2015, Yarpiz (www.yarpiz.com)
% All rights reserved. Please read the "license.txt" for license terms.
%
% Project Code: YPML110
% Project Title: Implementation of DBSCAN Clustering in MATLAB
% Publisher: Yarpiz (www.yarpiz.com)
%
% Developer: S. Mostapha Kalami Heris (Member of Yarpiz Team)
... |
0af6dcae85f96d5923da3c52c365520737a14a537d06104ce7882ee09101807e | MATLAB | 1,150 | 43 | classdef TrxVisualizerMAModel < TrackingVisualizerModel
% Model layer for TrxVisualizerMA.
%
% Holds non-gobject properties extracted from TrxVisualizerMA:
% trajectory parameters, color state, and show/hide flags.
properties
lObj % Labeler reference
showTrxPreNFrm = 15 % number of preceding frames to show ... |
5cc6fd29bda5b3dc92243f4f9583b46532a70a1c666e922d7ad136c5ce42d3cd | MATLAB | 1,150 | 45 | %% Plot CI and HPD for beta posterior
%
%%
% This file is from pmtk3.googlecode.com
model.a = 3;
model.b = 9;
alpha = 0.05;
%%
l = betainvPMTK(alpha/2, model.a, model.b);
u = betainvPMTK(1-alpha/2, model.a, model.b);
CI = [l,u]
%%
[styles, colors, symbols] = plotColors;
xs = linspace(0.001, 0.999, 40);
ps = exp(bet... |
d89ee98d0d29c5e26cdd88e5e6a1b3a2b2c1f35ae71168282f57e78d49019310 | MATLAB | 1,150 | 40 | function output = zlibdecode(input)
%ZLIBDECODE Decompress input bytes using ZLIB.
%
% output = zlibdecode(input)
%
% The function takes a compressed byte array INPUT and returns inflated
% bytes OUTPUT. The INPUT is a result of GZIPENCODE function. The OUTPUT
% is always an 1-by-N uint8 array. JAVA must be enabled ... |
fe333e32b8e44fbe31db5486475d35ce5e091be83db09292a014a87530668dd0 | MATLAB | 1,150 | 41 | function val = numericalIntegral(f, range, tol)
% Evalaute an integral using quad, dblquad or triple quad
% f must be a function that takes an n*1, n*2 or n*3 matrix
% and returns the function value at the specified points.
% range is [x1min x1max x2min x2max x3min x3max]
% This file is from pmtk3.googlecode.com
if ... |
0392e34a401521e0c514c147dc8486a96463a71e50e9fe2d4bc750be00c596bd | MATLAB | 1,151 | 34 | function zScores = getZScores(PSTH,binSize,condition,spontTimes,fs)
if strcmp('full',condition) == 1
%Use the full data to calculate zscore. More conservative estimate
[psthRow,psthCol] = size(PSTH);
zScores = zeros(psthRow,psthCol);
for ck = 1:psthRow
curVal = PSTH(ck,:);
curZ = zscore(... |
34dbacc5cc51e254dce1969566afd2bef982e8c968c673e592c34744f6225177 | MATLAB | 1,151 | 46 | %%%%%%%%%%%%%%%%%%%% RECOMPUTES THE REPROJECTION ERROR %%%%%%%%%%%%%%%%%%%%%%%%
check_active_images;
% Reproject the patterns on the images, and compute the pixel errors:
ex = []; % Global error vector
x = []; % Detected corners on the image plane
y = []; % Reprojected points
if ~exist('alpha_c'),
alpha_c = 0;
e... |
717c8155bcdb7f3439d3ae8b8e070717fefff655ea0f994541ae811dcb5e139d | MATLAB | 1,151 | 40 | function [cl1,cl2,dat1,dat2] = iimg_cluster_intersect(dat1,dat2,volInfo)
% Prunes two image data vectors (dat1 and dat2) assumed to contain suprathreshold
% contiguous clusters ("blobs") by saving only those blobs that have one or
% more significant (nonzero) elements in both images
%
% :Usage:
% ::
%
% [cl1,cl2,da... |
27087006f8f36bb7621db0e679344e3428475d109bd3e903fa241a1791d8b726 | MATLAB | 1,152 | 20 | function test_roian_aws_tracking()
linux_project_file_path = '/groups/branson/bransonlab/apt/unittest/four-points-testing-2025-04-12-with-rois-added-and-fewer-smaller-avi-movies-lightly-trained.lbl' ;
[project_file_path, replace_path] = localize_test_project_path(linux_project_file_path) ;
tester = LabelerProj... |
7d109b6e0c6fe110b413934fab4fb7b3f95b11c068ee3d13be2df1339894356d | MATLAB | 1,152 | 35 | function bels = jtreeQuery(jtree, queries)
%% Query a calibrated jtree for marginals
% Multiple queries can be requested in a cell array
% This file is from pmtk3.googlecode.com
queries = cellwrap(queries);
cliques = jtree.cliques;
cliqueLookup = jtree.cliqueLookup;
nqueries = numel(queries);
bels = ... |
cfbe4549b6f3b7fe340bea61a505134be5952f59e691b2c685ecc8b1409b61c2 | MATLAB | 1,152 | 51 | function h = about(labelerController)
%%
PURPLE = [0.147058823529412 0.033333333333333 0.245098039215686];
WDTH = 900;
HGHT = 420;
h = uifigure(...
'Position',[1000 1078 WDTH HGHT],...
'Name','About APT' ...
);
if ~isempty(labelerController)
mainFigurePosition = labelerController.mainFigurePixelPosition() ;
... |
d4d8634c0a6f67c52a036694bb0c12829a82e2db02d3c1ececd1d0f0b2b0cc52 | MATLAB | 1,153 | 40 |
% Hypothesis 2: Gaussian Blurring
%_______________________________________
% Copyright (C) 2024 Trevor S. Smith
% Drexel University College of Medicine
%
% This program is free software: you can redistribute it and/or modify
% it under the terms of the GNU General Public License as published by
% the Free Software F... |
78316f0fd9680f1c2131bb87e294947eb32ec91c14e284d4ef44d6f12841a2bb | MATLAB | 1,154 | 39 | function Y = divide(X,K,epsilon)
%DIVIDE Divide an SPTENSOR by a nonnegative KTENSOR.
%
% Y = DIVIDE(X,K,EPSILON) divides the sparse tensor X by the
% nonnegative ktensor K. Avoids divide-by-zero errors by dividing
% by MIN(EPSILON,K-VALUE) at each nonzero of X.
%
% See also SPTENSOR, KTENSOR.
%
%MATLAB Tensor T... |
b20168bbf325f9538e1a455245b3b713b41f7c7d84b2eda1b9047585f4f80d85 | MATLAB | 1,154 | 42 | function AmplPlot(spkDat, plotClust)
convertToVolt = true;
clustList = setdiff(unique(spkDat.id), 0);
clust = plotClust(ismember(plotClust, clustList));
nClust = length(clust);
nonClust = setdiff(plotClust, clustList);
if length(nonClust) ~= 0
disp([num2str(length(nonClust)) ' clusters not found in spkDat: ' num2... |
d44e4127548480848b7a4039a7a00c56e8e7a2cba080e58f55c0e7b5d3312326 | MATLAB | 1,154 | 39 | function [tf, tf_core, tf_U] = isequal(A,B)
%ISEQUAL True if the part of two ttensor's are numerically equal.
%
% TF = ISEQUAL(A,B) returns true if each factor matrix and the core
% are equal for A and B.
%
% [TF, TF_CORE, TF_FACTORS] = ISEQUAL(A,B) returns also the result of
% comparing the core (TF_CORE) an... |
14a00991879ef3d2055d5a69cae10a85fa9fe2ab16b046b9eec58f6917b57a58 | MATLAB | 1,155 | 35 | temp_string = readmatrix(meta_data_file_name,'OutputType','string');
temp_number = readmatrix(meta_data_file_name,'OutputType','double');
iamge_set_folder_detail = temp_number(8:end,:);
x_pix = 2000;
y_pix = temp_number(1,2);
x_res = temp_number(1,3);
z_res = temp_number(1,4);
%clear temp_string temp_n... |
87654ef484f475efe01978b4fbdc487e7614acb19f4c6e35bcb45192254547d9 | MATLAB | 1,155 | 49 | % MF_SPDIAG_SV_H Dispatch for MF_SPDIAG with DINV = 1 and F.SYMM = 'H'.
function D = mf_spdiag_sv_h(F,spinfo)
% initialize
N = F.N;
n = length(spinfo.i);
P = zeros(N,1); % for indexing
D = zeros(N,1); % for output
% loop over all leaf blocks from top to bottom
for i = n:-1:1
% find active indic... |
d59132c56b10d51249a866e5002f3eb23625ee20611284a68f06c532896513e0 | MATLAB | 1,155 | 45 | function f = subscript(m,range)
% function f = subscript(m,range)
%
% <m> is a matrix or a string referring to a matrix
% variable in the base workspace.
% <range> is:
% (1) vector index range that does not use
% the 'end' keyword, e.g., 4, [5 6]
% (2) the string ':'
% (3) a cell vector, where elements c... |
d98de1b779df8be203123d4656801867eff9fbabada415aa980f0f404e63bd13 | MATLAB | 1,155 | 47 | function [xn] = normalize(x_kk,fc,cc,kc,alpha_c)
%normalize
%
%[xn] = normalize(x_kk,fc,cc,kc,alpha_c)
%
%Computes the normalized coordinates xn given the pixel coordinates x_kk
%and the intrinsic camera parameters fc, cc and kc.
%
%INPUT: x_kk: Feature locations on the images
% fc: Camera focal length
% c... |
578e9d74008a21e40b8e4807064a2655dd674c04ad831d0cdc642719b1f9ec98 | MATLAB | 1,156 | 43 | function newdata = wlProc_calcPaddedLowpass(olddata, fcorner, samprate)
% function newdata = wlProc_calcPaddedLowpass(olddata, fcorner, samprate)
%
% This function wraps Matlab's "lowpass" function.
% Zero-padding is added on both sides of the data to give Matlab's filters
% time to stabilize. This is removed when the... |
b1ebe44d67fd5a04d0ce2b200230471608a83b38b096b2a909bdd3859f8672a6 | MATLAB | 1,156 | 32 | clear all
%%
%Define Parameters
[opt] = ParameterOptions();
%%
%Generate Pathway Amplitude & Gradient Waveform basis set
%First Dictionary
[PathwaySignalFirstOrder,GwaveFirstOrder,TransFirstOrder] = PathwayOperatorOrder(opt,'First');
%Second Dictionary
[PathwaySignalHigherOrder,GwaveHigherOrder,TransHigherOrder] = Path... |
496a260d71d5a9cb766f1538a0bd7cf019060ec65ac94c108fb0ab226fd953f7 | MATLAB | 1,157 | 47 | function Params=MinimalReduction
Params.Tests.usePCA=0;
Params.nPrinComp=20;
Params.plotPCA=0;
Params.robustPCA=0;
% Per feature stat test.
Params.Tests.anovaTest=0;
Params.anovaThresh=.05;
% Data Normalization
Params.Tests.zscore=0;
% Rate Restrictions
Params.Tests.DeflectionCoeffTest=0;
% Params... |
d0d2c78cf173a01239267598947c6c53ba863a4c1c55c1cfb9e88d3dd56243ae | MATLAB | 1,157 | 49 | % MF_SPDIAG_MV_H Dispatch for MF_SPDIAG with DINV = 0 and F.SYMM = 'H'.
function D = mf_spdiag_mv_h(F,spinfo)
% initialize
N = F.N;
n = length(spinfo.i);
P = zeros(N,1); % for indexing
D = zeros(N,1); % for output
% loop over all leaf blocks from top to bottom
for i = n:-1:1
% find active indic... |
48138ce33031b843f4551332542f93bfbaff9d08067f4981bd4f338faea2ac1c | MATLAB | 1,158 | 22 | %-----------------------------------------------------------------------
% Job saved on 28-Sep-2021 12:25:37 by cfg_util (rev $Rev: 7345 $)
% spm SPM - SPM12 (7771)
% cfg_basicio BasicIO - Unknown
% dtijobs DTI tools - Unknown
% impexp_NiftiMrStruct NiftiMrStruct - Unknown
%---------------------------------------------... |
515fc0eb16763abc48c938c8eb13816e83f8d1526240ae5faefbb288d778fcb4 | MATLAB | 1,158 | 46 | %%%%%%%%%%%%%%%%%%%% RECOMPUTES THE REPROJECTION ERROR %%%%%%%%%%%%%%%%%%%%%%%%
check_active_images;
% Reproject the patterns on the images, and compute the pixel errors:
ex = []; % Global error vector
x = []; % Detected corners on the image plane
y = []; % Reprojected points
if ~exist('alpha_c'),
alpha_c = 0;
e... |
7845f71cfca1ad9249d3393b2a1e023580881c3e51113ffa9d7969e2306c6e54 | MATLAB | 1,158 | 34 | function OTF = read_otf2d(otfPath, nx, ny, dkx, dky)
% ------------------------------------------------------------------------
% read_otf2d: generated 2D OTF image from OTF mrc files
%
% usage: OTF = read_otf2d(otfPath, nx, ny, dkx, dky)
% where,
% otfPath -- path of OTF mrc files
% nx, ny -- image size... |
832427015f4906eafbd7ec21c9b5d2f6f97d9f8d9cd7a1e7e32e91f45644c2fc | MATLAB | 1,158 | 38 | function Z = waveletTransformFourier(f1,f2,pas,X)
% wavelet transform (Morlet complex wavelet) of signal X
%
% Z = waveletTransformFourier(f1,f2,pas,k,x)
% INPUTS:
% X is a column vector
% f1 is the lower frequency in the decomposition (in normalized units, ie the highest frequency is 0.5)
... |
0def145d42be1d5025eaaea34ad3827a3f4ff72f1fbd33a041a87d54948594d0 | MATLAB | 1,159 | 55 | function R= rotationmat3D(r,Axis)
%function R= rotationmat3D(radians,Axis)
%
% creates a rotation matrix such that R * x
% operates on x by rotating x around the origin r radians around line
% connecting the origin to the point "Axis"
%
% example:
% rotate around a random direction a random amount and then back
% the ... |
1bebf155de238da2362c4d1ffc3c0b6e7950954906731beb6b7096e721a9333d | MATLAB | 1,159 | 34 | function [x, y, z] = h_calculateCenterOfMass(matrix)
% note: x is the second dimension, y is the first.
% the way below make the computer crash. (matrix too big)
% matrix = double(matrix);
% siz = size(matrix);
% if length(siz)<3
% siz(3) = size(matrix,3);
% end
% [X, Y, Z] = meshgrid(1:siz(2), 1:siz(... |
72726f45ce9bdba1e853c8b4a741b255c4da95be719629c918b204d6c13fb3f7 | MATLAB | 1,159 | 36 |
function [parameters] = MouseNotToUseVariability(parameters)
MessageToUser('Checking mouse for ', parameters)
% Get current mice not to use
dir_stem_iterator = parameters.values{strcmp(parameters.keywords, 'dir_stem_iterator')};
comparison_iterator = parameters.values{strcmp(parameters.keywords,... |
9e41a0aad39a6b6a872ea572ef2b5c88a374e5e535cfaec9b81c61b76d7617aa | MATLAB | 1,159 | 31 | function plot_atlasregions(params)
% Source model: centroid positons from Schaefer atlas
atlas = readtable(params.AtlasPath);
cfg = [];
cfg.method = 'basedonpos';
cfg.sourcemodel.pos = [atlas.R, atlas.A, atlas.S];
cfg.unit = 'mm';
cfg.headmodel = params.HeadModelPath;
sourcemodel_atlas = ft_prepare_sourcemodel(cfg);
so... |
ba4145e698815323e3c6e9b81762d99ce23e4894e497153adfaa39ebd56b2848 | MATLAB | 1,159 | 30 | function A = read_raw_file(filename,framenum,window,FOV,bitsize)
%Taken from epnev's NoRMCorre repository for use in the ExSeq Processing
% on 09/2017. All credit and appreciation to the original authors
%% Starting from frame number: 'framenum', read 'window'
fid = fopen(filename);
imsize = FOV(1)*FOV(2)*bitsize; ... |
0af84f54087d573b21fe60b8fd79e71259fb4eab01f36eaff48ddea2faa09ac8 | MATLAB | 1,160 | 29 | function X = matrandcong(m,n,gamma)
%MATRANDCONG Create a random matrix with a fixed congruence.
%
% X = MATRANDCONG(M,N,GAMMA) creates a matrix X of size M x N such
% that each column of X has norm 1 and any two columns of X have an inner
% product equal to GAMMA.
%
% Based on code from Evrim Acar and the pape... |
123b82a037f7191dd9cc788b7a1f4d49f457b54f9dde2ed1ed1c9c83324d23cb | MATLAB | 1,160 | 36 | function [F, J] = calcGaussianActivationPhase(gparams, spforiphase)
%The function can deal with mulitple subunits
% Detailed explanation goes here
%Returns derivatives for grid spacing, xshift and yshift
%==========================================================================
spf = spforiphase(:, 1);
ori = spfor... |
3cf59b9a07936b363c564580f333a26c01de35d5f52ddefa4d5f9089776bac14 | MATLAB | 1,160 | 43 | function [faRate, hitRate, AUC] = ROCcurve(score, trueLabel, doPlot)
% Plot a receiver operating curve
% function [faRate, hitRate, AUC] = plotROCcurve(score, trueLabel, doPlot)
%
% score(i) = confidence in i'th detection (bigger means more confident)
% trueLabel(i) = 0 if background or 1 if target
% doPlot - optional ... |
db904f383057dda2b5eaece76b50d0d16d4b8b8edfa7e5aae198805697d6b96d | MATLAB | 1,161 | 52 | % Illustration of gibbs sampling for 2-dim Gaussian
Mu = zeros(1,2);
Sigma = [1,0.99;0.99,1];
hold on;
axis([-3 3 -3 3])%'nolabel');
gaussPlot2d(Mu,Sigma,'-plotMarker','false');
x1 = [-2:0.01:2];
x2obs = 0.7;
mux1Cond = Mu(1) + Sigma(1,2)/Sigma(2,2) * (x2obs - Mu(2));
varx1Cond = Sigma(1,1) - Sigma(1,2)^2 / Sigma(2... |
03e83944d55cc105a5821f00b96a8f9306807546ff72adc7d73aeebe5329ab6f | MATLAB | 1,162 | 40 | function stage_puncta_extraction()
loadParameters;
%Save the loadParameters into the output director in case we need to do
%later debugging
copyfile('loadParameters.m',fullfile(params.punctaSubvolumeDir,...
sprintf('loadParameters.m.log-%s',date)))
[ret,messages] = check_files_in_punct... |
5748416ace0c26e5207ae6eea0d89f29f4b65c27e4416aa96e86aada456cbd90 | MATLAB | 1,162 | 33 | function xiSummed = hmmComputeTwoSliceSum(alpha, beta, A, B)
%% Compute the sum of the two-slice distributions over hidden states
%
% Let K be the number of hidden states, and T be the number of time steps.
% Let S(t) denote the hidden state at time t, and y(t) be the (not
% necessarily scalar) observation at time t.
... |
63997531892ef199b91d975fd2c4eb962007b90be025ad3b1983e6360e9ee43e | MATLAB | 1,162 | 53 |
% current directory: /m2_aae/utils/
%% read tf and gene association
x=textread('../data/raw/colon/human_PPI.txt','%s');
tt=length(x)/2;
binr = reshape(x,2,tt)';
%% doing ANOVA
bioMarker = 'PROM1';
name_pool_dir = strcat('../data/colon/resplit/ANOVA/os/',bioMarker,'_name_pool.mat');
load(name_pool_dir)
name_pool = na... |
a2c6886dcdccc7ac6f40fa8757a742c3d2c3e3af557e895f9c35cdea8dcf6b98 | MATLAB | 1,162 | 40 | function sp = polyn2sympoly(polyn)
% polyn2sympoly: convert a regression polynomial from polyfitn into a sympoly
% usage: sp = polyn2sympoly(polyn)
%
% arguments: (input)
% polyn - a structure as returned from polyfitn
%
% arguments: (output)
% sp - A sympoly object
%
% After conversion into a sympoly, any symbolic o... |
ad06e7aa4864bc9973ae7073c048b7ac01b0752d6fd3664e5c7454a32c2f63a8 | MATLAB | 1,162 | 35 | function C = mtimes(A,B)
%MTIMES sptensor-scalar multiplication.
%
% C = MTIMES(A,B) is called for the syntax 'A * B' when A or B is a
% sparse tensor and the other argument is a scalar.
%
% For tensor-matrix multiplication, use TTM.
% For tensor-tensor multiplication, use TTT.
% For tensor-tensor array mul... |
fa4df0942044cc913af8651e2bbdb48b829421aab006db3c4e4f5b1b4d7da22d | MATLAB | 1,162 | 53 | classdef FeaturesImporter < FeaturesReporter
properties
featuresFilePath
end
methods(Static)
function n = typeName()
% Return a name for this type of importer.
n = 'Feature';
end
function initialize
... |
fb2f482dfe563931746ccdcfbc9b05aa056288f79babc0e46904e6f26cb87fe8 | MATLAB | 1,162 | 44 | %% Plot monte carlo approximation to a distribution
% Based on Peter Hoff's book, fig 4.1, p55
% He uses Gamma(68, 45)
% This file is from pmtk3.googlecode.com
useGam = false;
setSeed(0);
xs = 0.5:0.01:2.5;
S = 1000;
if useGam
a = 68; b = 45; % shape (matlab uses scale)
p = gampdf(xs, a, 1/b);
samples = gamrnd... |
5b3a5fe849433acc201cae26caa173e23fb0d16536164288134b1f695c4d66fc | MATLAB | 1,163 | 40 | function [ f, J, H] = rlogistic3( params, x )
%LOGISTICFUN evaluates modified logistic with params at x
% Detailed explanation goes here
%==========================================================================
%define inputs
x = x(:);
gamma = params(1);
beta = params(2);
alpha = params(3);
%========... |
aa56092dce38533e0de348377c35fbad86e74f84e25558c7015d1b2d7d652639 | MATLAB | 1,163 | 23 | function [palmar_mask, palmar_template, dorsum_mask, dorsal_template] = GetHandMasks()
% Palm mask
palmar_template = imread(".\ReferenceImages\palm_right.png");
orig_size = size(palmar_template);
bw_image = imbinarize(palmar_template);
bw_image = bw_image(:,:,1);
[B, ~, ~] = bwboundaries(bw_ima... |
c1b02d870f6b4c77c87d70dff8cd4e8a00ac02b21aba54e99cf7c0dcd9794eb1 | MATLAB | 1,163 | 53 | %% Likelihood surface of mixture of 2 Gaussians in 1d
% Based on code by Mike Li
%%
% Generate data
% This file is from pmtk3.googlecode.com
fs = 12;
setSeed(0);
true_mu1 = -10;
true_mu2 = 10;
true_pi = 0.5;
sigmas = [5];
for sigmai=1:length(sigmas)
true_sigma = sigmas(sigmai);
n_obs = 100;
obs = [true_mu1 + true_... |
333ef7f4de46d0785c68d7ba643777b6d05361ba6d54ffaa708da71ccd911fe0 | MATLAB | 1,164 | 36 | function yhat = predictForest(forest,Xtest)
%Predict the output of a random forest generated via dtfit. If forest is a
%forest of regression trees, the mean of the output of the trees is taken,
%otherwise the mode.
nexamples = size(Xtest,1);
ntrees = size(forest,2);
if(isnumeric(for... |
39db239ae7ba893b451d2d2b58961a39d60c7d080dead671be3155730caeba5a | MATLAB | 1,164 | 36 | function mscmd_extract_raw(input_path,output_path,opts)
%MSCMD_EXTACT_RAW - extract a time chunk and/or channel subset of a timeseries
%
% This is a wrapper to the command-line mountainsort procedure.
%
% Syntax: mscmd_extract_raw(input_path,output_path,opts)
%
% Inputs:
% input_path - path to MxN timeseries array
... |
3a415a1f64e4dc73d6691a39790d2cc2b9b17e65be9140d1ae6e4c9466a00e2b | MATLAB | 1,164 | 41 | function data = spm2fieldtrip(D)
% SPM2FIELDTRIP converts an SPM8 meeg object into a FieldTrip raw data structure
%
% Use as
% data = spm2fieldtrip(D)
% where D is the SPM meeg object which you can load in with SPM_EEG_LOAD
% and where data is a FieldTrip raw data structure as if it were returned
% by FT_PREPROCESSI... |
d05e41bc024b2eee9caeb53b183c4e71aab72174a5359082cfcea8d915f70dc3 | MATLAB | 1,164 | 39 | function Tbig = bsxTable(fn, Tbig, Tsmall, bigdom, smalldom)
%% Apply a binary function to two multidimensional vectors using bsxfun
% reshaping and virtually expanding the smaller table as needed
%
% The tables are matched up according to smalldom and bigdom
% smalldom must be a subset (but not necessarily a subsequen... |
f62019c3e54399be21ac7bdda23393773b5e16f7312681ca04e0576d61ba9441 | MATLAB | 1,164 | 32 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% To calculate the silouhette value to estimate the quality of the Motor
% Unit (the distance between the peaks and the noise)
% Input:
% w = weigths
% X = whitened signal
% fsamp = sampling frequency
% Output:
% icasig = Normalized... |
1e24792573f152eed0b4c306cf332a8a78df1b655b0785f2e7b446b1f57c7d29 | MATLAB | 1,165 | 30 |
df = compile_sessions('Y:\laura_berkowitz\behavior_validation\appps1_cheeseboard\completed_sessions_10072025.csv');
for i = 1:length(df.basepath)
basepath = df.basepath{i};
basename = basenameFromBasepath(basepath);
session = loadSession(basepath,basename);
for ii = 1:length(session.epochs)
... |
e9be9bb45414fa39ef7dc5edad8667408d3df00d0881d24ed624a62ae95a1f28 | MATLAB | 1,165 | 28 | function candoit = canGetSqrtPrecon(problem)
% Checks whether a square root of preconditioner was specified in problem.
%
% function candoit = canGetSqrtPrecon(problem)
%
% Returns true if the problem structure allows for applying the square root
% of a preconditioner to tangent vectors at a given point. The squa... |
943f013c4666553d4b1da268da90126b96806c706eec2a2ec3901825eaae41d9 | MATLAB | 1,166 | 41 | function [data] = spm2fieldtrip(D)
% SPM2FIELDTRIP converts an SPM8 meeg object into a FieldTrip raw data structure
%
% Use as
% data = spm2fieldtrip(D)
% where D is the SPM meeg object which you can load in with SPM_EEG_LOAD
% and where data is a FieldTrip raw data structure as if it were returned
% by FT_PREPROCES... |
b3b09846299227de2666e71e6a3724644d0634c884e321a62945c46b572de2e0 | MATLAB | 1,166 | 33 | function plot_ratio_only(deltaR_R0, varargin)
figure
% various arguments in oder: curvature of head, fwd, bkw, turn
N = size(deltaR_R0, 1);
for i=1:N
subplot(N,1,i);
plot(deltaR_R0(i,:),'b','LineWidth',1.5);hold on;
plot(zeros(length(deltaR_R0(i,:)),1),'b:','LineWidth',1.5);
% de... |
d46fdee0b7afe5b431e2019e39e2d150c5004a1ce5ef1017f4ff798842d23fd8 | MATLAB | 1,166 | 37 | function [fx,dfdx,dfdP] = f_Qlearn(x,P,u,in)
% Reinforcement-learning model for a 2-armed bandit task
% function [fx,dfdx,dfdP] = f_Qlearn(x,P,u,in)
% An RL agent learns by trial and error. A bandit task is such that, after
% each action, the agent receives a feedback (reward if positive,
% punishment if negative). T... |
265f71745b9af2b8d6d877e5cabeb59980589cfa674d604b6fecb13dc6e4af92 | MATLAB | 1,167 | 33 | % This program is free software; you can redistribute it and/or modify
% it under the terms of the GNU General Public License as published by
% the Free Software Foundation; either version 2 of the License, or
% (at your option) any later version.
%
% This program is distributed in the hope that it will be useful,... |
6c72fd490e33e47cb2aa2559e1f3b3efafc836b10d1eb301cedf6be15cf6fa5a | MATLAB | 1,167 | 47 | function [xn] = normalize_pixel(x_kk,fc,cc,kc,alpha_c)
%normalize
%
%[xn] = normalize_pixel(x_kk,fc,cc,kc,alpha_c)
%
%Computes the normalized coordinates xn given the pixel coordinates x_kk
%and the intrinsic camera parameters fc, cc and kc.
%
%INPUT: x_kk: Feature locations on the images
% fc: Camera focal leng... |
971a4edbbaf6df9fd7a120218b61d0d7d04b0f87024cedbe5a54ddd203c2c200 | MATLAB | 1,167 | 33 | function Safe_imwrite(Image,FileNameDir,FileType)
ReSizeMethod='bicubic';
ReduceRatio=0.95;
if ~strcmp(class(Image),'double')
warning on
warning('Must convert image to double first!')
Image=double(Image);
end
ImageInfo=whos('Image');
if ImageInfo.bytes>(2^32-1)
... |
b31dc2ff96d7f2b8aa5920a2707f844ce14b83600d157df4f018c2bef122ae83 | MATLAB | 1,167 | 42 | function handles = prettyColorbar(titleStr, thinning)
if ~exist('thinning', 'var'), thinning = 0.5; end
% ==================================================================
% make colorbar look pretty
% ==================================================================
drawnow;
handles = findall(gcf,'Type','colorbar'... |
536f9f1535a2e2ae8beebb6e73692543e5262a98280cc6e90f4ed657d3f84a7e | MATLAB | 1,168 | 36 | function h_loadMEIAnalysis3(handles)
global h_img3;
[currentInd, handles, currentStruct, currentStructName] = h_getCurrendInd3(handles);
currentFilename = get(handles.currentFileName,'String');
[pname, fname, fExt] = fileparts(currentFilename);
analysisNumber = h_img3.(currentStructName).state.analysisNumb... |
532b1b0cb7d4ba77d51e05f4f6e4fa587cb901161792ca0ce0ac7f992ac820f1 | MATLAB | 1,169 | 33 | function varargout = extractArgs(indices,args)
% Extract specified arguments / values from the output of processArgs
% also returning the unused name/value pairs in a cell array.
%
% When processArgs is called with exactly one output, the output contains
% all of the name value pairs in a single cell array. The values... |
bfecab554320f23287ccd0df7dd3e185df28111e012b296ae8c4d421bdb3b990 | MATLAB | 1,169 | 25 | function [PulseT, Distime, exFactor] = getPulseT(EMG, EMGmask, MUFilters, fsamp)
EMG(EMGmask > 0,:) = [];
nbextchan = 1000;
exFactor = round(nbextchan/size(EMG,1));
eSIG = demean(extend(EMG,exFactor));
ReSIG = eSIG*eSIG'/length(eSIG);
iReSIGt = pinv(ReSIG);
nMU=1;
for i = 1:size(MUFilters,2)
PulseTtmp = (MUFilter... |
f96854818f21d3321f0fa952d237171ac049a6eb32f0a06800fe913e4e6f3e03 | MATLAB | 1,169 | 45 | %% Online Bayesian linear regression using Kalman filter
%
%%
% This file is from pmtk3.googlecode.com
standardize = false; %true;
[xtrain, ytrain] = polyDataMake('sampling','thibaux');
if standardize
[xtrain] = standardizeCols(xtrain);
end
N = length(xtrain);
wBatch = [ones(N,1) xtrain] \ ytrain;
w = zeros(2,... |
053275b69ba4b78b09123bf506bdc23c9d469245f5a233d41736af7a9fb27d2b | MATLAB | 1,170 | 36 |
%% Generate the pxtDataCell from sdoMat/sdoMultiMat with appropriate parameters;
function pxtdc = getConformedPxtDataCell(obj, type)
arguments
obj
type {mustBeMember(type, {'px0', 'px1'})} = 'px0';
end
pxtdc = pxtDataCell;
if ~isempty(obj.pxProperties)
pxtdc.zDelay = obj.pxProperties.... |
f8b7e5403ef19c4aa6dfb97cec66a9a113d6bd3c1c147e6673f730cbcb96aa3f | MATLAB | 1,170 | 49 | function [counts1, counts2] = getCounts()
% counts1(i,l) = num times word i occurs in language l
% counts2(i,j,l) = num times word i followed by j occurs in language l
% l=1 = english, l=2 = german, l=3 = spanish, l=4 = italian
linesEng = readlines('cnn.eng');
linesGer = readlines('cnn.ger');
linesSpa = readlines('cn... |
1ff4ee19af9cf0b98d4f8e0b15f170f9923d1ce870a0788729c8f58a0da3f7ca | MATLAB | 1,171 | 42 | function v = getOr(s, field, default, emptyOpt)
% getOr Returns the structure field or a default if either don't exist
% v = getOr(s, field, [default]) returns the 'field' of the structure 's'
% or 'default' if the structure is empty of the field does not exist. If
% default is not specified it defa... |
3671ec8ac57f084d7946f8af1b498a774d0c332057608003e34a2d70d734ac88 | MATLAB | 1,171 | 57 | function Z = concMovies(sizeThresh);
%%
% >>> OPERATION >>>
% Concatenation of short TIFF calcium movies into a long one
%%
% >>> USE >>>
%Select first TIFF file in the folder. The remaining files will be
%automatically found and concatenated
% Typical size threshold (sizeThresh) used for calcium movies: 20 MB
% For ... |
7613b99c577e59f75a1a00d0fc40a35192245a7c2df0819d4c52be17c1f6288d | MATLAB | 1,171 | 37 | function FormattedText = ColorText(input_text, colors)
% FormattedText = ColorText(input_text, colors)
% input text = cell(n,1) with chars in each cell
% colors = double(n,3) in RGB format with range 0-1
% Output: cell array with formatted text. Can then use text(x,y,FormattedText)
if size(... |
b97f900892a5e6285c0d5fbabd02b5cc0f525638876e4c8ce4d31c7723eb2ac4 | MATLAB | 1,171 | 47 | function C = mtimes(A,B)
%MTIMES tensor-scalar multiplication.
%
% C = MTIMES(A,B) is called for the syntax 'A * B' when A or B is a
% tensor and the other argument is a scalar.
%
% For tensor-matrix multiplication, use TTM.
% For tensor-tensor multiplication, use TTT.
% For tensor-tensor array multiplicati... |
d48662277559f21cf7c3c76c0ec23cb9381daf994a15872d77a0b797d4656995 | MATLAB | 1,171 | 69 | function plotTraces (traces,time,norm,color)
% if isempty(color)
% color = 'b';
% end
if nargin < 4
color = 'b';
end
if isempty(norm)
norm = 'no_norm';
end
N_cells = size(traces,1);
snr = mean(max(traces,[],2)./min(traces,[],2));
if snr < 0
snr = -snr;
end
if snr < 1.8
norm_fact = 10/snr;
e... |
826d8829c8b8392edbc15c7d7294694660291aea83cfec90dd17e8da7f1c83b6 | MATLAB | 1,172 | 39 | function [posR, triR, keeppos] = remove_double_vertices(pos, tri)
% REMOVE_DOUBLE_VERTICES removes double vertices from a triangular mesh
% renumbering the vertex-indices for the triangles and removing all
% triangles with one of the specified vertices.
%
% Use as
% [pos, tri] = remove_double_vertices(pos, tri)
[po... |
95aecf493275bd035732be5c145ee3a44e353d8f18293b9281c923f0571ac269 | MATLAB | 1,172 | 37 | function [ template_seg ] = fcp_generatetemplatesegment( )
% FCP_GENERATETEMPLATESEGMENT check if already-segmented template exists. if so, use it. otherwise, generate!
% determine path to template MRI
fullPath = which('ft_preprocessing.m');
if ~isempty(fullPath)
[pathstr,~,~] = fileparts(fullPath);
info.templ... |
ccaa55626efe4cdbf218a7bdcb56f7992cc9caaab20a0d4fadd4eb6dbaf64ef2 | MATLAB | 1,172 | 41 | function p = MultiTestCorrection(p, nTests, Method, Inverse)
% Correct p-values for multiple testing, by Bonferroni or Sidak method.
%
% p = MultiTestCorrection(p, nTests, Method, Inverse)
%
% Given a certain number of tests or comparisons (nTests), correct
% p-values (p) to obtain the family-wise error ra... |
79c0eaf240b8d7b7b65da4b37cf4bea015ea98049381a63164c641bd6b2368be | MATLAB | 1,173 | 53 | function LAN = arreglaeventos(LAN,inicio,final)
currcode = cell2mat({LAN.event.type});
if isfield(LAN.event,'latency_aux')
currlate = cell2mat({LAN.event.latency_aux})
else
currlate = cell2mat({LAN.event.latency})
end
if isfield(LAN.event, 'duration' )
currdura = cell2mat({LAN.event.duration});
else cur... |
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