sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
e5de992da77e38fa66c52448565ff92d3896cc4c3db2d239ab836bd424967776 | C/C++ | 12,347 | 350 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
503b576a0d0bd06c4db31f11a06f16811b263bb7b8b33868d592c6466f541c38 | C/C++ | 12,348 | 313 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
6a4bd40733c9d19f286d4776dae5ab7b825dfe9cf00f7b5555d4d63fead995bd | C/C++ | 12,361 | 348 | /* matrix/gsl_matrix_ulong.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the Li... |
fa8b2f8dd1635a3019865618579aa90da88733e315a4133f968caebf94407d76 | C/C++ | 12,361 | 348 | /* matrix/gsl_matrix_uchar.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the Li... |
fea7face985e350efba6e4c06ea18d0db203d01b1c5e07d2b1e0d803a77cddb7 | C/C++ | 12,380 | 346 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
*modification, are permitted provided that the following conditions are... |
21bb6c656ebc646523cb454920a292b659abeb0033f48464afa06c4da5d15c4b | C/C++ | 12,393 | 337 | /**
* (C) Copyright 2020, 2021, 2022, 2023, 2024 IBM. All Rights Reserved.
*
* This code is licensed under the Apache License, Version 2.0. You may
* obtain a copy of this license in the LICENSE.txt file in the root directory
* of this source tree or at http://www.apache.org/licenses/LICENSE-2.0.
*
* Any modific... |
5c4b49b9e92f766846798d4a77b22f5ef67e3e82129ac1c36f70431db90a6501 | C/C++ | 12,447 | 350 | /* matrix/gsl_matrix_ulong.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the Li... |
7562fa24128c91e5adbd4d273dae69f4f3d75958fc03c1f91b45881744c88790 | C/C++ | 12,447 | 350 | /* matrix/gsl_matrix_uchar.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the Li... |
1624464ae932c8aed1979a770395493ae0f4779d3b1bf79f874af5e761c2baa2 | C/C++ | 12,478 | 349 | /* matrix/gsl_matrix_complex_double.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 ... |
7a6b57c6ae7856ead6f8488785b1d4f0afccdd971a77c8cbfc2f5df2f372800d | C/C++ | 12,495 | 380 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License version 3 as published by the... |
8177909f24c6e7dc09121ae0eb0577e9a5c844e2b2e1361254acdf2a8a4c2590 | C/C++ | 12,495 | 265 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
20b0d9515dbc2e7c12dd2c8b719510d1c74f1b3052b0057ac63480427b82f266 | C/C++ | 12,570 | 351 | /* matrix/gsl_matrix_complex_double.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 ... |
44b0571ba4db0297134a7e1c1e3a21af00f76e130d8d96aad4b0c807938c2b96 | C/C++ | 12,579 | 348 | /* matrix/gsl_matrix_ushort.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the L... |
0a4d239d34cb58f189cb0d7debef9507e3296182534896e0c87c8c58d7d22fe7 | C/C++ | 12,580 | 326 | // rotamer_lib.h --- Rotamer library base class
// Copyright (C) 2008-2009 Jesper Ferkinghoff-Borg, Wouter Boomsma
//
// This file is part of Phaistos
//
// Phaistos is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Software Found... |
d96fa6bb0b343f770e4daf1107fe0d75b878390b627aef75099f6c157f60057a | C/C++ | 12,584 | 341 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
255f67e965cae56b681d0378896cebf6a5abb1c1bbe15097a4a5c0c19c92dbcb | C/C++ | 12,604 | 341 | // opls_torsion.h --- OPLS torsion angle energy term
// Copyright (C) 2009-2011 Kristoffer Enøe Johansson
//
// This file is part of Phaistos
//
// Phaistos is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Software Foundation, ei... |
c4eaf6d39a101cc3f6b6b3cc6241720f36cbcba288b7a7c4cced503b0272c6f2 | C/C++ | 12,619 | 351 | // hidden.h --- Hidden node
// Copyright (C) 2006-2008 Wouter Boomsma
//
// This file is part of Phaistos
//
// Phaistos is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Software Foundation, either version 3 of the License, or
//... |
74019bbb6194d0654e472bb18457aafe7bf919e997759523db997b48f60a9694 | C/C++ | 12,626 | 321 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
c07aecbe7cd56b91e2843cfe150e3703103771b469cd0a74063cca5f1b22ed8d | C/C++ | 12,633 | 362 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
24d36e6c5ccfc4837a2959bb92bb6a4afeaecb81cb39b4f22058d4e55fd5ec35 | C/C++ | 12,636 | 309 | #include "utils.h"
void lfmm3d_s_c_p_(double *eps, int *nsource,
double *source, double *charge, double *pot, int *ier);
void lfmm3d_s_c_g_(double *eps, int *nsource,
double *source, double *charge, double *pot, double *grad, int *ier);
void lfmm3d_s_c_h_(double *eps,... |
5254dabe4e3281df7989215e56fcda0e2a35b49f8b1f7d79c7ff114f6df7f768 | C/C++ | 12,668 | 350 | /* matrix/gsl_matrix_ushort.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the L... |
a99ebb5166ccf7cf8aaed83f56bb27b55cbeaf3015f4e186087c4a7a2fa3af19 | C/C++ | 12,789 | 328 | /** \file matroska_read.h
* Copyright (c) Microsoft Corporation. All rights reserved.
* Licensed under the MIT License.
* Kinect For Azure Record SDK.
* Internal MKV Reading Helpers
*/
#ifndef RECORD_READ_H
#define RECORD_READ_H
#include <k4ainternal/matroska_common.h>
#include <functional>
#include <mutex>
#inc... |
5b6af3e5095c38ae682776e574e429d6076357492c81231dedec98a15bda86d0 | C/C++ | 12,794 | 365 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
30726b7d07259f8c9e78d831a88943b7200d1aef85cab50367368299fad245b6 | C/C++ | 12,814 | 451 | /*============================================================================
MetaIO
Copyright 2000-2010 Insight Software Consortium
Distributed under the OSI-approved BSD License (the "License");
see accompanying file Copyright.txt for details.
This software is distributed WITHOUT ANY WARRANTY; without ev... |
372efc71d5a4060217ef497bee2854d48159942a92274d9ddccbc58c01d58509 | C/C++ | 12,817 | 198 | // Generated by using Rcpp::compileAttributes() -> do not edit by hand
// Generator token: 10BE3573-1514-4C36-9D1C-5A225CD40393
#ifndef RCPP_lassosum_RCPPEXPORTS_H_GEN_
#define RCPP_lassosum_RCPPEXPORTS_H_GEN_
#include <RcppArmadillo.h>
#include <Rcpp.h>
namespace lassosum {
using namespace Rcpp;
namespace... |
786177871d4909b6cb0c3767f4d62c04f4b97adc959b0661fc990cff0d082cef | C/C++ | 12,851 | 425 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License version 3 as published b... |
442543e7c3cec4448ee97c66c55b6f1cb0862922980ca83e2a9f63dad00eb950 | C/C++ | 13,010 | 361 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
aa66a0435adc52b37f0002b9f159725cf743f421d96fe8a725b7f503d684eda0 | C/C++ | 13,051 | 389 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2007 Julien Pommier
// Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// ... |
7fa87054c8cd59066b6e19d4b27781644c618af7fea413877d93ff1a209c896f | C/C++ | 13,085 | 313 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License version 3 as published by the... |
518fb473b3fe892ab6f6864ada54480d615da8235493714d74bdeabefb99de5b | C/C++ | 13,127 | 242 | /*
* -----------------------------------------------------------------
* $Revision: 1.2 $
* $Date: 2006/11/29 00:05:07 $
* -----------------------------------------------------------------
* Programmer(s): Scott D. Cohen and Alan C. Hindmarsh @ LLNL
* -------------------------------------------------------------... |
288f28a68503208364bbebb4080e6b9481ab87ebf25b64da1f9340d59941356a | C/C++ | 13,157 | 345 | /* eigen/gsl_eigen.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2006, 2007 Gerard Jungman, Brian Gough, Patrick Alken
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either versio... |
33c4706b5bd0923a6692a5cbe18b0a96380fb74ac0b263de046641ed2cb26467 | C/C++ | 13,162 | 463 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
df8bb7c450adc195a9be287c92dcfbc54ebef313d28c670e2545ca1298694c7b | C/C++ | 13,199 | 336 | /*
* -----------------------------------------------------------------
* $Revision: 1.6 $
* $Date: 2010/12/22 22:18:49 $
* -----------------------------------------------------------------
* Programmer: Radu Serban @ LLNL
* -----------------------------------------------------------------
* Copyright (c) 2006, T... |
2b618b30c97ed775da5890d6c23d0ead87a839cc34ab31cb5a72292c168a882d | C/C++ | 13,250 | 355 | // profasi_local_sidechain.h --- profasi side chain torsion angle energy term
// Copyright (C) 2010 Pengfei Tian, Wouter Boomsma
//
// This file is part of Phaistos
//
// Phaistos is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free ... |
8c4d7474ce0c6a92978df89a03daf98a09c1f5ceaeb64b085d5d9376e9712650 | C/C++ | 13,255 | 319 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License version 3 as published by the... |
0956991e89b8b9af45902748a7d8dc8ac1fe42a99c95cda79d9ccd6daad3e45c | C/C++ | 13,259 | 331 | /*
* -----------------------------------------------------------------
* $Revision: 1.11 $
* $Date: 2010/12/01 22:13:10 $
* -----------------------------------------------------------------
* Programmer(s): Radu Serban @ LLNL
* -----------------------------------------------------------------
* Copyright (c) 20... |
84e24fef6ebdfb9bae8f4d223f45450d862a4c441e512f072236cc29173a6708 | C/C++ | 13,287 | 435 | /** @file kmeans.h
** @brief K-means (@ref kmeans)
** @author Andrea Vedaldi
** @author David Novotny
**/
/*
Copyright (C) 2007-12 Andrea Vedaldi and Brian Fulkerson.
Copyright (C) 2013 Andrea Vedaldi and David Novotny.
All rights reserved.
This file is part of the VLFeat library and is made available under
the t... |
f70ed43286333bf11e478ea265a0cf19722d5582775584f33bb3c28f96fa45a4 | C/C++ | 13,288 | 334 | /*----------------------------------------------------------------------------*/
/* CP2K: A general program to perform molecular dynamics simulations */
/* Copyright 2000-2022 CP2K developers group <https://cp2k.org> */
/* ... |
59f76cae4b65e3f1821367d03df89bd337c3b45a39d2f345528f37e3e2506821 | C/C++ | 13,291 | 327 | /*
* -----------------------------------------------------------------
* $Revision: 1.9 $
* $Date: 2010/12/01 22:15:15 $
* -----------------------------------------------------------------
* Programmer(s): Alan C. Hindmarsh, Radu Serban and
* Aaron Collier @ LLNL
* -------------------------------... |
cea15656befac0334529d648060b5054763cdb9c25163f64afc35ed6c3131e68 | C/C++ | 13,304 | 298 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2006-2009 Benoit Jacob <jacob.benoit.1@gmail.com>
// Copyright (C) 2010 Hauke Heibel <hauke.heibel@gmail.com>
//
// Eigen is free software; you ca... |
a9d86e7356000943a0a3244dac7d3c663c8c0db47d2af3e0103fc62246a9213f | C/C++ | 13,316 | 387 | /*============================================================================
MetaIO
Copyright 2000-2010 Insight Software Consortium
Distributed under the OSI-approved BSD License (the "License");
see accompanying file Copyright.txt for details.
This software is distributed WITHOUT ANY WARRANTY; without ev... |
55876c98cfaa6df3de568f4c3d6f78ea37d7fd9d2f01270c926b7c9595b2d904 | C/C++ | 13,332 | 251 | // Copyright (c) Microsoft Corporation. All rights reserved.
// Licensed under the MIT License.
#pragma once
#include <chrono>
#include <vector>
#include <iomanip> // std::setw
#include <k4a/k4a.hpp>
// This is the maximum difference between when we expected an image's timestamp to be and when it actually occurred.
c... |
893ed172d4b80a8a03013f661dff036942c7d3ba763688d6f2eaad3330404b32 | C/C++ | 13,333 | 251 | // NonUniformDynamicBinner.h
// Copyright (c) 2010-2012 Jes Frellsen
//
// This file is part of Muninn.
//
// Muninn is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License version 3 as
// published by the Free Software Foundation.
//
// Muninn is distributed in t... |
3c93c044ad98560954f0f4b66eecbae0e94e87e0473b7de9e4ea2a44d0583620 | C/C++ | 13,395 | 429 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
4ef04900a6fdcfecb956204e178fdcb4f646f2bea8d85a826026f2088c5d3165 | C/C++ | 13,419 | 334 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
87269e8f217c78ebe91c0a709895acc11d03980d99abad85ba3ebc0f6453d5e9 | C/C++ | 13,419 | 552 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
b6f92a4c8aab933d148f18bf04471803b9b52aa72ebb8c11580bd51c9594256c | C/C++ | 13,423 | 266 | /**
* @file score.h
* @author JR, modified by Yoginho
*
* @copyright Copyright (C) 1989-2003 John Reinitz, 2009-2013 Damjan Cicin-Sain,
* Anton Crombach and Yogi Jaeger
*
* @brief Stu... |
bd7be4ef793e59a3f43efa6870d3fa4cde336dfc7f63b0abd97c4f760217248a | C/C++ | 13,433 | 373 | // opls_angle_bend.h --- OPLS angle-bend energy term
// Copyright (C) 2009-2011 Kristoffer Enøe Johansson, Wouter Boomsma
//
// This file is part of Phaistos
//
// Phaistos is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Softwar... |
f1f406274e4bb6c8dd5a03ecba536865440c45d499430618e8ff273b04444242 | C/C++ | 13,464 | 340 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License version 3 as published by the... |
d70d1eaa5b582adda595a06ba82fbf126c43a3d63a0ba006d75d0ddb8322d4c0 | C/C++ | 13,472 | 334 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2001 Intel Corporation
// Copyright (C) 2010 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2009 Benoit Jacob <jacob.benoit.1@gmail.com>
//
// Eigen is free software; you can redistribute it and/or
... |
3b78a2ec87b9786d4f5cf2aa1c3003fa2f884de5014ce50039f2594c33aaa7f2 | C/C++ | 13,474 | 319 | /*
* -----------------------------------------------------------------
* $Revision: 1.7 $
* $Date: 2010/12/01 22:16:17 $
* -----------------------------------------------------------------
* Programmer(s): Scott Cohen, Alan Hindmarsh, Radu Serban, and
* Aaron Collier @ LLNL
* --------------------... |
c94f45a0e96e227cf7d8a53c6aa8d31792c6ae0181bde98cf695317456a6bfd3 | C/C++ | 13,479 | 374 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
29c62eed9d441da598f996dfd51730d7853bd8ae112de0c7ad94b30430ec1cc0 | C/C++ | 13,492 | 424 | /** @file mser.h
** @brief MSER (@ref mser)
** @author Andrea Vedaldi
**/
/*
Copyright (C) 2007-12 Andrea Vedaldi and Brian Fulkerson.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#ifndef VL_MSER
#define VL_MSER
#... |
88774704e63095c5d01d6ae3cd60f377f5cf117c79a6594c164880b297a2078b | C/C++ | 13,509 | 348 | /* matrix/gsl_matrix_long_double.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of ... |
6d82581c49811b0e25c5c7e1f9ac9256e856b400f502b0b941d615b67593f8d5 | C/C++ | 13,512 | 414 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
13b49ffa8860494fef98a7b13352f3f2f7d93c43a3e077134db328ef378cd53f | C/C++ | 13,528 | 333 | // chain_fb.h --- Full-atom backbone chain (inherits from Chain)
// Copyright (C) 2006-2008 Wouter Boomsma
//
// This file is part of Phaistos
//
// Phaistos is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Software Foundation, e... |
73e105108f383ca4c194679cbf306f091ad84e9df969cf1bcc8550102fcf60ce | C/C++ | 13,529 | 405 | // fb5.h --- Fb5 Node. Density and sampler for the 5-parameter Fisher-Bingham distribution
// Copyright (C) 2006-2008 Wouter Boomsma, Thomas Hamelryck
//
// This file is part of Phaistos
//
// Phaistos is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as pub... |
944707f5fd26c7b4bede0a1ea6cac68adb41c737faed0deab95088eef86eb354 | C/C++ | 13,613 | 350 | /* matrix/gsl_matrix_long_double.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of ... |
6aa6c254607577fa0eaeb6b010e3c8f156287778132b9ea8d48da6c7a85c15d7 | C/C++ | 13,639 | 402 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
c0c094e6cdaba50a0d9d29975b31b920d46c553edf723f5e3d133fcd18e55eec | C/C++ | 13,644 | 227 | // LinearPolatedWeights.h
// Copyright (c) 2010-2012 Jes Frellsen
//
// This file is part of Muninn.
//
// Muninn is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License version 3 as
// published by the Free Software Foundation.
//
// Muninn is distributed in the ... |
d5917f26b36006b707194f3c158e4a0a5c01fedcaf45a46a9fb087ce81bdc37b | C/C++ | 13,644 | 335 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
*modification, are permitted provided that the following conditions are... |
f21d1d7629a813a54ba3cb7f87d12199794a99f80683f975072b5c1833b72960 | C/C++ | 13,645 | 464 | /** @file heap-def.h
** @brief Heap preprocessor metaprogram
** @author Andrea Vedaldi
**/
/*
Copyright (C) 2007-12 Andrea Vedaldi and Brian Fulkerson.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
/** @file heap... |
6f62b2992e2e36b86a4f6f92c40e1e2fa1932e95b11c95989ad7ad6c6d1ac5da | C/C++ | 13,656 | 349 | /* matrix/gsl_matrix_complex_float.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 o... |
84ec6f8b039270fb469af24981c4db9e2aadd26d9e5cf2d8e1248b3179059110 | C/C++ | 13,695 | 398 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2006-2008 Benoit Jacob <jacob.benoit.1@gmail.com>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the... |
b2cf63a4f4056e6a53decf52e020ad5ef49e11ae54a1b9c2049010a5f2eb6bb8 | C/C++ | 13,695 | 558 | #ifndef _NUMPY_STRUCT_H
#define _NUMPY_STRUCT_H
#include <map>
#include <memory>
#include <fstream>
#include <cstring>
#include "Tensor.h"
#include "Endianness.h"
#define ZIP_FILE_MAGIC 0x04034b50
#define ZIP_DICTIONNARY_MAGIC 0x02014b50
#define NPY_MAGIC_1 0x93
#define NPY_MAGIC_2 "NUMPY"
enum NumpyHeaderObjectTy... |
37ac021dc22cd5282742edfabbb04dbc2e1eb51e11d9629290c0cc38df2a831f | C/C++ | 13,766 | 351 | /* matrix/gsl_matrix_complex_float.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000, 2007 Gerard Jungman, Brian Gough
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 o... |
4731b48a87f3cebe93dde3f0d52dd6d2ff091fa3fbe2d4978ca6c68196c79a92 | C/C++ | 13,772 | 441 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
631c2a898f98beb2b081ef9fdb602c9800e9e1a1473d07f5cb6039461930e17a | C/C++ | 13,799 | 493 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
268be3f1f870c2f2a001c98f04f79d3286e7f71ab25d991ac19822eb544dd6df | C/C++ | 13,820 | 523 | #ifndef __GBITVEC_H__
#define __GBITVEC_H__
#include "GBase.h"
//this code is lifted from LLVM (llvm.org, BitVector.h)
/// bitCount_32 - this function counts the number of set bits in a value.
/// Ex. CountPopulation(0xF000F000) = 8
/// Returns 0 if the word is zero.
inline uint bitCount_32(uint32_t Value) {
#if __GNU... |
3fd030d3c0a120fa4b9044a18c8b8fc7e1788f0aba408c3c378995c072a6a81c | C/C++ | 13,832 | 507 | #ifndef __GCDB_H
#define __GCDB_H
#include "GBase.h"
#include <stddef.h>
#include <fcntl.h>
#ifdef _WIN32
#define PROT_READ 1
#define PROT_WRITE 2
#define PROT_READWRITE 3
#define MAP_SHARED 1
#define MAP_PRIVATE 2
#define F_OK 0
#define R_OK 4
#define W_OK 2
#define RW_OK 6
#ifndef MAP_FAILE... |
6a0e6bf8ac6ddc7920894fce36a6d4f251f2a74c7946ac1fa56b567bdd208d73 | C/C++ | 13,874 | 301 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2007-2010 Benoit Jacob <jacob.benoit.1@gmail.com>
// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms o... |
7047abbfec75d7237ff8ae19f7740f7b6c48de7e1e2120cda46e853b78a29979 | C/C++ | 13,879 | 318 | /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* ... |
7f8b915716e4381f96b6c50714db7dd4f1be21c1abd16f7aaf2ad416500bc65e | C/C++ | 13,886 | 563 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
68accda5ac0a5a806173cd7e2651da83efce3ac29f021a300e58ff1d41990a8b | C/C++ | 13,937 | 338 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
2e7412f8456fbee8751ef8bdb8af9c72aaa2b25b65c47ded0b0bda27e677e987 | C/C++ | 13,954 | 321 | /*
* -----------------------------------------------------------------
* $Revision: 1.9 $
* $Date: 2010/12/01 22:14:09 $
* -----------------------------------------------------------------
* Programmers: Alan Hindmarsh, Radu Serban and Aaron Collier @ LLNL
* ------------------------------------------------------... |
e6c578fbd938285bf6bbb60f109cb74036062afb9a1a551ffc86294b2b5c75f4 | C/C++ | 13,958 | 394 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
bd1256e5bef36f8d251893db16a12159f5d20ec7ebf6363591d6cc7dcfa058db | C/C++ | 13,989 | 376 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
6c4628f351536d1e2bb9c1873bad83be5fb00010debc998d800845ec210b398e | C/C++ | 14,031 | 365 | /*
* -----------------------------------------------------------------
* $Revision: 1.8 $
* $Date: 2010/12/01 22:13:10 $
* -----------------------------------------------------------------
* Programmer: Radu Serban @ LLNL
* -----------------------------------------------------------------
* Copyright (c) 2006, ... |
a3db6eda8f8c22dda2221fe8474f2a135f2b10e3220637cc3c673adf27822373 | C/C++ | 14,034 | 416 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
a3dbf64e16ff005019654df9bc57b05015675dac4a3e368930f48168ba978c57 | C/C++ | 14,039 | 393 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
485178dab21e087ea16759785ae5e385ed0470c5765ce79b23fc2361d5d9b1eb | C/C++ | 14,066 | 328 | // CGE.h
// Copyright (c) 2010-2012 Jes Frellsen
//
// This file is part of Muninn.
//
// Muninn is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License version 3 as
// published by the Free Software Foundation.
//
// Muninn is distributed in the hope that it will... |
37503ac6f704fd4341f28bb94397274feecb5872ab7e82f1b33b0a8c113a8c50 | C/C++ | 14,068 | 548 | /* specfunc/gsl_sf_bessel.h
*
* Copyright (C) 1996, 1997, 1998, 1999, 2000 Gerard Jungman
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or (at
* you... |
31e1e636373d2aa6739378188dd5cab5b639f2643aa9a18ffa0233c0d705f2b5 | C/C++ | 14,148 | 378 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
8ab701afe167e123371b1e342ebc3edd34ef4110be4139fff84e9a1f379f1860 | C/C++ | 14,151 | 343 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2006-2010 Benoit Jacob <jacob.benoit.1@gmail.com>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the... |
bba95e398bc7e1089fac2b814fd26e1d0080d099fc633dc95c8d6b42ef9a168b | C/C++ | 14,166 | 369 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License version 3 as published by the... |
d1aabbc055efda94fecd39b78b895e6137bee715529dabdb95dc5d1f1cb275ce | C/C++ | 14,179 | 395 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License version 3 as published b... |
b61ed8bf55dc7317e40702e7cc8a68e8e6b4d39fe4d043b7223204ef0fb0f97f | C/C++ | 14,204 | 354 | // basilisk_dbn.h --- Encapsulates all dbn handling for Basilisk
// Copyright (C) 2010 Tim Harder
//
// This file is part of Phaistos
//
// Phaistos is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Software Foundation, either ve... |
3d8bfb992b6211c1fce5f4108380ff6515b8eba4ce1d7ff2134a26deed70af19 | C/C++ | 14,220 | 487 | /*----------------------------------------------------------------------------*/
/* CP2K: A general program to perform molecular dynamics simulations */
/* Copyright 2000-2022 CP2K developers group <https://cp2k.org> */
/* ... |
3f73aee0b2f1125d67255545f927e8c866d639af96f048ddde44c945bdeb9025 | C/C++ | 14,224 | 380 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
911451cbfc8680114846b4e5369f191aa5ac83b4294202d07351e295d3b3a447 | C/C++ | 14,279 | 342 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
b34468d7e7d592b2ee218af33e3a7155a8ff9b7a0f742737f8a4741efc4bf6cd | C/C++ | 14,312 | 426 | #ifndef _G_BAM_H
#define _G_BAM_H
#include "GBase.h"
#include "GList.hh"
#include "bam.h"
#include "sam.h"
class GBamReader;
class GBamWriter;
class GBamRecord: public GSeg {
friend class GBamReader;
friend class GBamWriter;
bam1_t* b;
// b->data has the following strings concatenated:
// qname (inclu... |
0f0da742dce12e094cd0aa91a1dad4bb6d9006eea019364e62568610db101134 | C/C++ | 14,353 | 530 | // vector_nd.h --- n-dimensional vector class
// Copyright (C) 2006-2008 Wouter Boomsma
//
// This file is part of Phaistos
//
// Phaistos is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Software Foundation, either version 3 of ... |
8b21e57a00638a9bb2ed55a25ca9d448d9044a60efdac076945ad469b5593a00 | C/C++ | 14,385 | 284 | // CGEfactory.h
// Copyright (c) 2010-2012 Jes Frellsen
//
// This file is part of Muninn.
//
// Muninn is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License version 3 as
// published by the Free Software Foundation.
//
// Muninn is distributed in the hope that ... |
848338922fb1ecf9ca380cea89953295a7600a0d1dfc8494475895c0904071bf | C/C++ | 14,401 | 424 | /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* ... |
ed31d1b714aa9e248acb7c88d43009daefd110e145cd2c30f319c62c49c8d550 | C/C++ | 14,428 | 424 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
cf1becf0d698626a24ab0b736a58a5e47352515d220be07a88be6775117e7a34 | C/C++ | 14,455 | 409 | /***************************************************************************************************
* Copyright (c) 2017-2021, NVIDIA CORPORATION. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without modification, are permitted
* provided that the following conditions ar... |
50bfffc4f5410d345011ab3567542edd841718d82d7d84b9bd6b398fe04171c4 | C/C++ | 14,539 | 355 | // move_sidechain_dbn_local.h --- Move: Resample sidechain angles using DBN - local version
// Copyright (C) 2008-2009 Tim Harder, Wouter Boomsma
//
// This file is part of Phaistos
//
// Phaistos is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as publishe... |
b1cf86e211a50411d15af126d8ae566e42444aba4b6a09dee4dbbbba5137c011 | C/C++ | 14,539 | 414 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2010 Konstantinos Margaritis <markos@codex.gr>
// Heavily based on Gael's SSE version.
//
// Eigen is free software; you can redistribute it ... |
018f389acaf479d3b338d65735f6b4b0e483d74d552b12d92a68c61aed487254 | C/C++ | 14,601 | 378 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2010 Jitse Niesen <jitse@maths.leeds.ac.uk>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the ... |
b2d9ae2b7e6fa74b3577dac0a317a05b51bd0d8eb435d4a717c5ba13e9f444b7 | C/C++ | 14,623 | 424 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2009 Benoit Jacob <jacob.benoit.1@gmail.com>
// Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU ... |
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