sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
e9c416c3e1da902410c80f5cf2090d951764ae05e369e3ab3ea2f440c45b700e | Java | 9,285 | 295 | package io.ray.api.options;
import io.ray.api.Ray;
import io.ray.api.concurrencygroup.ConcurrencyGroup;
import io.ray.api.placementgroup.PlacementGroup;
import io.ray.api.runtimeenv.RuntimeEnv;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
/** The options for creat... |
0ceef1ec87cbe7d7ce8ebffb294130ccb5bce699c0f74fa7e7381fb04cc6a840 | Java | 9,410 | 285 | package io.ray.api.runtime;
import io.ray.api.ActorHandle;
import io.ray.api.BaseActorHandle;
import io.ray.api.CppActorHandle;
import io.ray.api.ObjectRef;
import io.ray.api.PyActorHandle;
import io.ray.api.WaitResult;
import io.ray.api.concurrencygroup.ConcurrencyGroup;
import io.ray.api.exception.RuntimeEnvExceptio... |
964d5be322fbef1053eb556c5fc16731f61aac1b1ccfce31e0b031df13c5aab9 | Java | 9,412 | 236 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
ad50c8fe1e912a2a650be531ec81143a52a95577ca3ebaa20559978015de9e57 | Java | 9,460 | 267 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
1954de3453864bed738ad07b3a8b5ecf114d2e753a79756c46316b4354de8d56 | Java | 9,514 | 375 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
a0d4b58be1ecf50d19aa3f5146a19bca764b7c93a368d0c462c858358b78eaa7 | Java | 9,516 | 203 | package Orion_Stardist;
import java.util.Arrays;
import java.util.HashMap;
import java.util.LinkedHashSet;
import java.util.stream.IntStream;
import org.scijava.ItemIO;
import org.scijava.ItemVisibility;
import org.scijava.command.Command;
import org.scijava.menu.MenuConstants;
import org.scijava.plugin.Menu;
import ... |
2c7974154b9d3dcbd6cb58169c4173ecc82dcffd1848c85eeef3613584fc89f9 | Java | 9,553 | 195 | package Orion_Stardist;
import java.util.Arrays;
import java.util.HashMap;
import java.util.LinkedHashSet;
import java.util.stream.IntStream;
import org.scijava.ItemIO;
import org.scijava.ItemVisibility;
import org.scijava.command.Command;
import org.scijava.plugin.Parameter;
import org.scijava.widget.Button;
import ... |
2138023602868479415e1459775e81bea0084b006aa53a46be37b8e4d7b2e8d0 | Java | 9,576 | 277 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
2b143f38b9f7ada29871ef962477e847b0d3bf1663243ed274ed88f70c022f0a | Java | 9,722 | 274 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
ccf0321308efb598875412668254adb4ef477c193099c9dc79919e48ea252922 | Java | 9,739 | 250 | package io.ray.runtime.functionmanager;
import io.ray.api.function.RayFunc0;
import io.ray.api.function.RayFunc1;
import io.ray.api.id.JobId;
import io.ray.runtime.functionmanager.FunctionManager.JobFunctionTable;
import java.io.File;
import java.nio.file.Files;
import java.nio.file.Paths;
import java.util.Collections... |
955a67bb8dbb07ee738520628c9b8426a2a1b155ff182948c9b9f84e2ea49c92 | Java | 9,858 | 269 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.objdetect;
import java.lang.String;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfDouble;
import org.opencv.core.MatOfInt;
import org.opencv.core.MatOfRect;
import org.opencv.co... |
09eef3a88a4034c6130d58983753c3a537f3895cae778922e9b908777c90a8dd | Java | 10,141 | 276 | /*
* #%L
* Sholl_Analysis plugin for ImageJ
* %%
* Copyright (C) 2016 Tiago Ferreira
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of the
* License, or ... |
127d5a5d084c41b6229810fcf29f23385130b444df64307b5f67a4f8fdc51791 | Java | 10,245 | 370 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import java.lang.String;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.TermCriteria;
import org.opencv.ml.EM;
import org.opencv.ml.StatModel;
import org.opencv.utils.Converters;
... |
ffda3d14cc0c99b846d7d1ec03ae4f3697cf66365a5ee887e883c9f0a270f4c9 | Java | 10,545 | 315 | package io.ray.runtime.util.generator;
import java.io.File;
import java.io.IOException;
import java.nio.charset.Charset;
import java.util.ArrayList;
import java.util.List;
import org.apache.commons.io.FileUtils;
/**
* A util class that generates `RayCall.java` and `ActorCall.java`, which provide type-safe
* interfa... |
9b1d5ded9c5275e363fd69a81bd75dac753819b369b992658ec4a7b902e7adc1 | Java | 10,561 | 253 | package io.ray.runtime.functionmanager;
import com.google.common.collect.Lists;
import io.ray.api.function.RayFunc;
import io.ray.runtime.util.LambdaUtils;
import java.io.File;
import java.lang.invoke.SerializedLambda;
import java.lang.reflect.Constructor;
import java.lang.reflect.Executable;
import java.lang.reflect.... |
5ef6c82eeccec9a3add36cc8c87a71162f18cc668ed8457608b04b4a57648e9a | Java | 10,573 | 289 | package io.ray.runtime;
import com.google.common.base.Preconditions;
import io.ray.api.BaseActorHandle;
import io.ray.api.exception.RayIntentionalSystemExitException;
import io.ray.api.id.ActorId;
import io.ray.api.id.JobId;
import io.ray.api.id.ObjectId;
import io.ray.api.id.UniqueId;
import io.ray.api.options.ActorL... |
a67445b1dfa733d07690e316f5f0e816bbec8abe72931dd960a640e79b5d61c0 | Java | 10,688 | 285 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
119315b94db31e15d5fb1d480fe191c35755b5aafe7ce14f1c9ae69d70477be3 | Java | 10,814 | 330 | package io.ray.serve.api;
import com.google.protobuf.ByteString;
import io.ray.api.ActorHandle;
import io.ray.api.BaseActorHandle;
import io.ray.api.PyActorHandle;
import io.ray.api.Ray;
import io.ray.api.exception.RayActorException;
import io.ray.api.exception.RayTimeoutException;
import io.ray.api.function.PyActorMe... |
3ab196f4c86c9a7594578160d64d59c9484ab2d52b1e42fe2016a047ef4d2437 | Java | 10,855 | 464 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.video;
import org.opencv.core.Mat;
import org.opencv.video.BackgroundSubtractor;
// C++: class BackgroundSubtractorMOG2
//javadoc: BackgroundSubtractorMOG2
public class BackgroundSubtractorMOG2 extends BackgroundSubtractor {
protec... |
a6296479a902486c371724ee82669b95ca3ca595139f61e088fd582184a8a865 | Java | 10,916 | 296 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
b4b36041201dcdd0675b67d590c0c44425bec37461c85fb9d8ed023d3c0eb628 | Java | 10,939 | 459 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.video;
import org.opencv.core.Mat;
// C++: class KalmanFilter
//javadoc: KalmanFilter
public class KalmanFilter {
protected final long nativeObj;
protected KalmanFilter(long addr) { nativeObj = addr; }
public long getNativ... |
0995a31137e881f9def06cf2986c55f08845ce6dfae7a875ca390a7c397d199d | Java | 10,988 | 464 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.video;
import org.opencv.video.DenseOpticalFlow;
import org.opencv.video.DualTVL1OpticalFlow;
// C++: class DualTVL1OpticalFlow
//javadoc: DualTVL1OpticalFlow
public class DualTVL1OpticalFlow extends DenseOpticalFlow {
protected Du... |
f2f1c3ab6b0315f0efe2568ca94ce647093129dd8c3c197125b6a81a50f2a2f0 | Java | 11,030 | 316 | package io.ray.test;
import static io.ray.api.runtimeenv.types.RuntimeEnvName.JARS;
import com.google.common.collect.ImmutableList;
import com.google.common.collect.ImmutableMap;
import io.ray.api.ActorHandle;
import io.ray.api.Ray;
import io.ray.api.runtimeenv.RuntimeEnv;
import io.ray.api.runtimeenv.RuntimeEnvConfi... |
db99dabcfa289b5e5d0b86d71fb3cc71cb71f6a7df2a757b0e6a456ecd50f4ba | Java | 11,143 | 407 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.imgproc;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfFloat4;
import org.opencv.core.MatOfFloat6;
import org.opencv.core.MatOfInt;
import org.opencv.core.MatOfPoint2f;
import o... |
60efd77e4730750a1765b07c6c98d8474136b370f004eb6fd91cc99b68cdf0d9 | Java | 11,167 | 304 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
==========================... |
9127651880b63f16c677e3367b986721cfaca39e5d142e23cae6563a1c863568 | Java | 11,169 | 336 | package io.ray.serve.config;
import com.google.common.base.Preconditions;
import com.google.common.collect.Lists;
import com.google.protobuf.ByteString;
import com.google.protobuf.InvalidProtocolBufferException;
import io.ray.runtime.serializer.MessagePackSerializer;
import io.ray.serve.common.Constants;
import io.ray... |
6c41d21a85e9bbc268342e9711b08bd577391120ba5a8569fea2b3971fc5f179 | Java | 11,279 | 313 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
==========================... |
8be27ac4e80050dd0fd6b33adfaa877b7e6998c00e758d303e31f882c2676429 | Java | 11,392 | 157 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.features2d;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfByte;
import org.opencv.core.MatOfDMatch;
import org.opencv.core.MatOfKeyPoint;
import org.opencv.core.Scalar;
import o... |
a45d2255f1caa899c77d7491461282ee1b9af1e98f9bdf945aabe64c27a80cfc | Java | 11,718 | 345 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.dnn;
import java.lang.String;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfFloat;
import org.opencv.core.MatOfInt;
import org.opencv.core.MatOfRect;
import org.opencv.core.Scal... |
0f73a22b4b0de9e305371b7c2e9a4dc2b3c6cd9b61862b40a6171b8d230222e6 | Java | 11,944 | 361 | package io.ray.runtime.config;
import com.google.common.base.Preconditions;
import com.google.common.base.Strings;
import com.typesafe.config.Config;
import com.typesafe.config.ConfigException;
import com.typesafe.config.ConfigFactory;
import com.typesafe.config.ConfigRenderOptions;
import io.ray.api.id.JobId;
import ... |
6bdbcc91355f9da0892c9f67e5ec47764e0214d736c42e99aa635ca26b0903d5 | Java | 12,038 | 267 | package org.broadinstitute.svpipeline;
import java.io.ByteArrayInputStream;
import java.io.ByteArrayOutputStream;
import java.io.IOException;
import java.util.Arrays;
import java.util.Collections;
import java.util.List;
import org.broadinstitute.svpipeline.VCFParser.*;
public final class VCFParserUnitTest {
publ... |
9a0921794844ba77ba778fb1740d61ff1d765947f351f225ec507ae57c1774eb | Java | 12,040 | 301 | package io.ray.runtime.serializer;
import com.google.common.base.Preconditions;
import com.google.common.collect.ImmutableList;
import java.io.IOException;
import java.lang.reflect.Array;
import java.math.BigInteger;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import org.apache.commons.lang3... |
d1b33e9bf8e9ac84218e6b9e923f45a6fadc8c8ef56ca0e95d2f615d6db8381b | Java | 12,041 | 275 | package io.ray.serve.deployment;
import io.ray.api.Ray;
import io.ray.serve.BaseServeTest2;
import io.ray.serve.api.Serve;
import io.ray.serve.config.AutoscalingConfig;
import io.ray.serve.handle.DeploymentHandle;
import java.io.IOException;
import java.nio.charset.StandardCharsets;
import org.apache.hc.client5.http.c... |
a8e93785aa68cc48f1b5dd7bc582bf7829aa7f803e87d481cb307e1f9cc13bca | Java | 12,312 | 345 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
5ef17c10b9f26d2bbce9c204db19775646522c3668921859ed74a7bdccf5cbcb | Java | 12,327 | 523 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import java.lang.String;
import org.opencv.core.Mat;
import org.opencv.core.TermCriteria;
import org.opencv.ml.ParamGrid;
import org.opencv.ml.SVM;
import org.opencv.ml.StatModel;
// C++: class SVM
//javadoc: SVM
public class SVM ex... |
8c4f4d5a3e3ca3635bc7954b4baa6361f1c6939ed3254d302548f101e1b3fa00 | Java | 12,477 | 275 | /*
* #%L
* hIPNAT plugins for Fiji distribution of ImageJ
* %%
* Copyright (C) 2017 Tiago Ferreira
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of the
... |
f75f1967d360b3a26e9cbc3062c6983805edee067929b724b81cb628f2110370 | Java | 12,691 | 269 | package org.broadinstitute.svpipeline;
import java.io.*;
import java.util.*;
import org.broadinstitute.svpipeline.VCFParser.*;
/** Read a VCF, and try to stitch together adjacent copy-number variations.
* Eligible Records (which we call "stitchable") must meet certain criteria as specified by the
* isStitchable met... |
740ab946f8b4511f304bf7fe156cf0f871b06d0517a9eba0cdbbd4e7707cc846 | Java | 12,839 | 399 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
3fcc0ad9f2f9496e50aab63162e5123b8048834cb202972c3ad7010bebb02210 | Java | 13,008 | 379 | package io.ray.test;
import com.google.common.collect.ImmutableList;
import io.ray.api.ActorHandle;
import io.ray.api.ObjectRef;
import io.ray.api.Ray;
import io.ray.api.concurrencygroup.ConcurrencyGroup;
import io.ray.api.concurrencygroup.ConcurrencyGroupBuilder;
import io.ray.api.concurrencygroup.annotations.DefConc... |
e83f224981c1bc2d32171c65052c9bcc43a1fc791481126b422aae66c32dc79b | Java | 13,081 | 377 |
import Orion_Stardist.StarDist2D;
import fiji.util.gui.GenericDialogPlus;
import ij.IJ;
import ij.ImagePlus;
import ij.measure.Calibration;
import ij.plugin.Duplicator;
import java.awt.Color;
import java.awt.Font;
import java.io.File;
import java.util.ArrayList;
import java.util.Collections;
import javax.swing.ImageIc... |
55fe4c380aaf7364d1130c2557919572f9c135f0b3d20466d21ab888e05406a9 | Java | 13,441 | 239 | /*
* Find dots (PML) in outlined Cells
* Measure integrated intensity, nb of dots per cells detect if cell infected
* Author Philippe Mailly
*/
import ij.*;
import ij.io.FileSaver;
import ij.plugin.PlugIn;
import ij.plugin.RGBStackMerge;
import java.io.BufferedWriter;
import java.io.File;
import java.io.FileWr... |
ebfb9f2eb208a1dacee5f26a9e6f5b7453d669811b0c9c2e46025217ad492708 | Java | 13,473 | 326 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
9c4b5028e984c35b699e81f22c6cb679a1b25564cd11f5ccca022a68cff638a5 | Java | 13,671 | 397 | package io.ray.serve.replica;
import com.google.common.collect.ImmutableMap;
import io.ray.api.BaseActorHandle;
import io.ray.runtime.metric.Count;
import io.ray.runtime.metric.Gauge;
import io.ray.runtime.metric.Histogram;
import io.ray.runtime.metric.Metrics;
import io.ray.serve.api.Serve;
import io.ray.serve.common... |
cae0e88716615d638d3278f212b8a1f7da69285e9c357271db6069c379b22604 | Java | 13,726 | 610 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import java.lang.String;
import org.opencv.core.Mat;
import org.opencv.core.TermCriteria;
import org.opencv.ml.ANN_MLP;
import org.opencv.ml.StatModel;
// C++: class ANN_MLP
//javadoc: ANN_MLP
public class ANN_MLP extends StatModel ... |
9c0901ee7095674c07e2459f017d223c2813a65c7ff147a9b10cd8979611dacd | Java | 13,821 | 288 | package io.ray.runtime.object;
import com.google.common.collect.ImmutableList;
import com.google.common.primitives.Bytes;
import com.google.protobuf.InvalidProtocolBufferException;
import io.ray.api.exception.RayActorException;
import io.ray.api.exception.RayException;
import io.ray.api.exception.RayTaskException;
imp... |
5ce7293bed196a95cc8fb32dbd2a66cc337edd8358390857041130f725dbb193 | Java | 13,977 | 414 | /* Copyright 2019 The TensorFlow Authors. All Rights Reserved.
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable law or a... |
defce7458a2a841fd5d7dc1bbf7106ba48a72e38cc6cbe94aada31683d0bc54c | Java | 13,999 | 420 | package io.ray.serve.api;
import com.google.common.base.Preconditions;
import io.ray.api.BaseActorHandle;
import io.ray.api.PyActorHandle;
import io.ray.api.Ray;
import io.ray.api.exception.RayActorException;
import io.ray.api.exception.RayTimeoutException;
import io.ray.api.function.PyActorClass;
import io.ray.api.fu... |
add5e7612415500670c43deb4171fd68285fbd477c6c0fbd7d1c427684f6b9c9 | Java | 14,168 | 428 | package lychi;
import java.util.BitSet;
import java.util.logging.Level;
import java.util.logging.Logger;
import java.util.concurrent.locks.ReentrantLock;
import chemaxon.struc.Molecule;
import chemaxon.struc.MolAtom;
import chemaxon.struc.MolBond;
import chemaxon.formats.MolImporter;
import chemaxon.formats.MolFormat... |
b4cf4d8d382be588fa9012a1f8ed805a3b2bb4f3f0b6c564c9eb49812a2eb876 | Java | 14,356 | 454 | // Theo Walker
// Max Planck Florida Institute
// naroom@gmail.com
package cellMagicWand;
import java.util.ArrayList;
import java.util.Collections;
import java.util.Comparator;
import ij.ImagePlus;
import ij.process.ShortProcessor;
public class PolarTransform {
Ring[] rings;
PolarPixel[][] polarI... |
fe9d2012f9be77e7607b388669392ff791ac9c54774c45355cbda2a8b85a0c3d | Java | 14,640 | 430 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
847353872f843c36573d77dba0371238e539a4f73e07d7d1b5995ef983b91a63 | Java | 14,740 | 391 | package io.ray.test;
import com.google.common.collect.ImmutableList;
import com.google.common.collect.ImmutableMap;
import com.google.gson.Gson;
import io.ray.api.ActorHandle;
import io.ray.api.ObjectRef;
import io.ray.api.Ray;
import io.ray.api.exception.RayException;
import io.ray.api.id.ObjectId;
import io.ray.runt... |
6848f38b5bf3c73512a9ceb632ca8fb9dfa3ca1cc0dff29b6cf64549b66cb229 | Java | 14,847 | 674 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.features2d;
// C++: class Params
//javadoc: Params
public class Params {
protected final long nativeObj;
protected Params(long addr) { nativeObj = addr; }
public long getNativeObjAddr() { return nativeObj; }
// inter... |
d9a13b0ada3e82945caa9db4015be586e6fe96892d57c0c5a2d8ec69a5e2149a | Java | 14,856 | 379 | package org.opencv.android;
import java.util.List;
import android.content.Context;
import android.graphics.ImageFormat;
import android.graphics.SurfaceTexture;
import android.hardware.Camera;
import android.hardware.Camera.PreviewCallback;
import android.os.Build;
import android.util.AttributeSet;
import android.util... |
aa2303aae57ce92abc0c4788f35512f4632b4b2b4220c20bf100d2ec46ff673c | Java | 15,054 | 374 | package org.opencv.android;
import java.nio.ByteBuffer;
import java.util.Arrays;
import android.annotation.TargetApi;
import android.content.Context;
import android.graphics.ImageFormat;
import android.hardware.camera2.CameraAccessException;
import android.hardware.camera2.CameraCaptureSession;
import android.hardwar... |
0313affd26639b6477ad076c5002c81aa996042d9320b3fcfcf7ff8179a5b2d1 | Java | 15,067 | 439 | package io.ray.runtime.util.generator;
import java.io.File;
import java.io.IOException;
import java.nio.charset.Charset;
import java.util.ArrayList;
import java.util.List;
import org.apache.commons.io.FileUtils;
/**
* A util class that generates `RayCall.java` and `ActorCall.java`, which provide type-safe
* interfa... |
d075be8e145844c6ca1ee399906fa3e3fd9c274c8fad92e8c297c83724593d41 | Java | 15,096 | 484 | // Theo Walker
// Max Planck Florida Institute
// naroom@gmail.com
package cellMagicWand;
import java.util.ArrayList;
import java.util.Collections;
import java.util.Comparator;
import ij.ImagePlus;
import ij.process.ShortProcessor;
public class PolarTransform {
Ring[] rings;
PolarPixel[][] polarI... |
e2d5dd933c0fe06bc629bfaa5bae7a32789b36a30ae1b82c2b61db1abaa57dc3 | Java | 15,186 | 477 | package lychi.tautomers;
import java.util.Collection;
import java.util.List;
import java.util.ArrayList;
import java.util.LinkedList;
import java.util.Map;
import java.util.TreeMap;
import java.util.HashMap;
import java.util.Set;
import java.util.HashSet;
import java.util.Enumeration;
import java.util.Collections;
imp... |
63e34b114d5860b6189ac1c10d3cab5c2889e836d4f47b11774d53eff97c943e | Java | 15,309 | 428 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.features2d;
import java.lang.String;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Algorithm;
import org.opencv.core.Mat;
import org.opencv.core.MatOfDMatch;
import org.opencv.features2d.DescriptorMatcher;
impo... |
4a69df69e1c910f0695e1d9d872224cdd7d58a2ea9058c14ea084db3c5dac8a7 | Java | 15,681 | 430 | package io.ray.runtime;
import com.fasterxml.jackson.core.JsonProcessingException;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.fasterxml.jackson.databind.node.ObjectNode;
import com.google.common.base.Preconditions;
import com.google.common.collect.ImmutableList;
import io.ray.api.ActorHandle;
impor... |
6e0334fa37c8a8dfcb8d83dd24d432b18e09b8460347d97985f77be70bfcc587 | Java | 15,692 | 459 | package Genes_Tools;
import fiji.util.gui.GenericDialogPlus;
import ij.IJ;
import ij.ImagePlus;
import ij.measure.Calibration;
import ij.plugin.Duplicator;
import ij.plugin.filter.RankFilters;
import ij.process.AutoThresholder;
import ij.process.ImageProcessor;
import java.awt.Color;
import java.awt.Font;
import jav... |
b8ff8cd880e81e2c3f3eadc0cb1ab22c896472c8828541662d6b5a8234026a44 | Java | 16,109 | 672 | package lychi;
import java.util.*;
import java.util.logging.Logger;
import java.util.logging.Level;
import chemaxon.struc.MolAtom;
import chemaxon.struc.MolBond;
import chemaxon.struc.Molecule;
import chemaxon.util.MolHandler;
import lychi.util.ChemUtil;
import lychi.util.MolPath;
/**
* Deprotonation... please be ... |
d00e3e64d5e2a3643d925f0c73612b2f4f7a096fc866401dbef1433f2821b2d3 | Java | 16,129 | 446 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
df70c1cb4e9f60f999cd41e0939dac945a6bf746e73b5e2ca06312701887adad | Java | 16,274 | 311 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.video;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfByte;
import org.opencv.core.MatOfFloat;
import org.opencv.core.MatOfPoint2f;
import org.opencv.core.Rect;
import org.opencv... |
10aba869b6d7439c6c3d7be62d174aa21cc1dc177e5a521830051139f5ffda75 | Java | 16,682 | 722 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import java.lang.String;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.ml.TrainData;
import org.opencv.utils.Converters;
// C++: class TrainData
//javadoc: TrainData
public class Tr... |
ebabeb2250f603b47c85d3bcb4ad7745c849e0ad57b5d13b2e7657410133c88a | Java | 17,331 | 622 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.dnn;
import java.lang.String;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfDouble;
import org.opencv.core.MatOfInt;
import org.opencv.dnn.DictValue;
import org.opencv.dnn.Layer... |
6290346cb1b57f0c905eed88fd08bbabd085ec73231ba9afd8d7a2830769d88e | Java | 17,653 | 507 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
9699cfee97398bd461bc02e124c0f1e01011f42f1b1c590bea614d0288ac058e | Java | 17,922 | 391 | package org.opencv.android;
import java.io.File;
import java.util.StringTokenizer;
import org.opencv.core.Core;
import org.opencv.engine.OpenCVEngineInterface;
import android.content.ComponentName;
import android.content.Context;
import android.content.Intent;
import android.content.ServiceConnection;
import android... |
9df23fed5793917e847176f12c8667c264cacd059e9daa05c5f220ec25518717 | Java | 18,253 | 495 | package org.opencv.android;
import java.util.List;
import org.opencv.BuildConfig;
import org.opencv.R;
import org.opencv.core.Mat;
import org.opencv.core.Size;
import android.app.Activity;
import android.app.AlertDialog;
import android.content.Context;
import android.content.DialogInterface;
import android.content.r... |
64d4283cfad38e65404ee75cf96a2817ceffc57bf2fc3cb64787ae5db1d3fe34 | Java | 18,378 | 526 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
e81f4f13f430a6fa6066a392dab1c7f26bd062c899c348426af3e0e58e5c75d5 | Java | 19,709 | 597 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.objdetect;
import java.lang.String;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfDouble;
import org.opencv.core.MatOfFloat;
import org.opencv.core.MatOfPoint;
import org.opencv... |
5281131d196b349cf1a314843ae6d83aff3041c47befc921baee38fb474a86f2 | Java | 19,796 | 933 | package lychi;
import java.util.BitSet;
public class ElementData {
public static final int MAX_CHARGE = 2;
public static final int MIN_CHARGE = -2;
// atomic number, charge, valence
public static final int[][][] ElData;
public static final BitSet NonMetals = new BitSet (255);
public static f... |
ff6906364e8b9f1312ec602c0a898a204fc2116e4a5a23c5ca10a929cee59e44 | Java | 19,986 | 568 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
10618e36a58927d9496015893608f64e6bab679955c8bca2f917c8620004dbfb | Java | 20,225 | 531 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
b582679ed497ec04a2ec44bb581b5db7974f213a700fe0e64b75204d0e97ed52 | Java | 20,512 | 433 | package Orion_Stardist;
//import static de.csbdresden.stardist.Orion_StarDist2DModel.MODELS;
//import static de.csbdresden.stardist.Orion_StarDist2DModel.MODEL_DSB2018_HEAVY_AUGMENTATION;
//import static de.csbdresden.stardist.Orion_StarDist2DModel.MODEL_DSB2018_PAPER;
//import static de.csbdresden.stardist.Orion_Star... |
a6081103d5b3e2cc759af3b4df9336864132d509b1246af0d70c92d2ddd81ed3 | Java | 20,776 | 545 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
68406f329f4d9687b7117d89a19dc5db4c82fe4719a41f24b7799acbd7628ebb | Java | 20,906 | 456 | package Orion_Stardist;
//import static de.csbdresden.stardist.StarDist2DModel.MODELS;
//import static de.csbdresden.stardist.StarDist2DModel.MODEL_DSB2018_HEAVY_AUGMENTATION;
//import static de.csbdresden.stardist.StarDist2DModel.MODEL_DSB2018_PAPER;
//import static de.csbdresden.stardist.StarDist2DModel.MODEL_HE_HEA... |
e3f7e43dc5cdba315b16d3fa6ee31bfc871e7ae9738f7cfd18b5669ad422343a | Java | 20,952 | 545 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
b3126607442b2b68017fb5acff172358325ed1526a26b23fbf831569a9c6444f | Java | 21,201 | 553 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
98907e6f69b3a76e891c95898bf4a21164af8bc62084e398b077b3b13ca630c2 | Java | 22,803 | 590 | package io.ray.test;
import com.google.common.base.Preconditions;
import io.ray.api.ActorHandle;
import io.ray.api.CppActorHandle;
import io.ray.api.ObjectRef;
import io.ray.api.PyActorHandle;
import io.ray.api.Ray;
import io.ray.api.exception.CrossLanguageException;
import io.ray.api.exception.RayException;
import io... |
81bc892dd5e118c8808b590ecabc9c2086fd53496f5ed662317272d518854540 | Java | 22,917 | 693 | package lychi.util;
import java.util.Random;
import java.util.HashMap;
import java.util.Map;
import java.util.logging.Logger;
import java.util.logging.Level;
import java.security.SecureRandom;
import java.util.concurrent.*;
public class Base32 {
private static final Logger logger =
Logger.getLogger(Base... |
3f2a8ed33064a78d5f7c4fc72c4cfb905ed8d2423a98b8f67ed8dc75de856b41 | Java | 23,433 | 846 | package lychi.util;
import java.io.InputStream;
import java.io.FileInputStream;
import java.util.*;
import java.util.logging.Logger;
import java.util.logging.Level;
import chemaxon.formats.MolImporter;
import chemaxon.struc.MolAtom;
import chemaxon.struc.MolBond;
import chemaxon.struc.Molecule;
import chemaxon.util.... |
8fc6f39e08e15a3a5a12bb3a27afa4e50286b9e8d2457eb459a8ba000ff55c27 | Java | 23,927 | 925 | package lychi.util;
import java.util.*;
import java.util.logging.Logger;
import java.util.logging.Level;
import java.util.regex.Matcher;
import java.util.regex.Pattern;
import chemaxon.struc.MolBond;
import chemaxon.struc.MolAtom;
import chemaxon.struc.Molecule;
import chemaxon.util.MolHandler;
import chemaxon.format... |
d07659167e7c8343cf5487cd01c8b9d7d5c85ed07b044d665bfbc80ea47c078f | Java | 26,164 | 773 | package org.opencv.utils;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.CvType;
import org.opencv.core.Mat;
import org.opencv.core.MatOfByte;
import org.opencv.core.MatOfDMatch;
import org.opencv.core.MatOfKeyPoint;
import org.opencv.core.MatOfPoint;
import org.opencv.core.MatOfPoint2f;
im... |
082ee17dfdfee28e7a79fb3592855e9c69d75cc7021312cd387c2ef45e46c70f | Java | 26,185 | 627 | package io.ray.runtime.task;
import com.google.common.base.Preconditions;
import com.google.common.collect.ImmutableList;
import com.google.protobuf.ByteString;
import io.ray.api.ActorHandle;
import io.ray.api.BaseActorHandle;
import io.ray.api.id.ActorId;
import io.ray.api.id.ObjectId;
import io.ray.api.id.PlacementG... |
0f6ce6a8e5d0dd3791075f8c6af43bfc89b249b1443e3c4d2005472e28b4d6e6 | Java | 26,694 | 494 | package lychi;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.*;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.Collections;
import java.util.List;
import java.util.Random;
import java.util.stream.Collectors;
import java.util.stream.IntStream;
import org.junit.Test... |
d9b602099205938da4046ef9a3d3db5f3e8b198e24cfce32c1f1fcaeeef26aab | Java | 28,267 | 711 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
aef595769142e77d011b8703ad755523a6b407f62921bf4404dbb0363c74eb2f | Java | 30,176 | 755 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.photo;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfFloat;
import org.opencv.core.Point;
import org.opencv.photo.AlignMTB;
import org.opencv.photo.CalibrateDebevec;
import org.... |
c3e74cdbd5610d635c6070a2a9a637ab73f6040a329c5c697f94d4ec0133eb41 | Java | 31,424 | 683 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.videoio;
// C++: class Videoio
//javadoc: Videoio
public class Videoio {
public static final int
CV_CAP_ANY = 0,
CV_CAP_MIL = 100,
CV_CAP_VFW = 200,
CV_CAP_V4L = 200,
CV_... |
7ca71ded5f10eeb56b07fe832ad63f6bd704fcc70fdbb9be562da85a7fb74eee | Java | 31,988 | 880 | package org.broadinstitute.svpipeline;
import java.io.*;
import java.util.*;
import java.util.zip.GZIPInputStream;
/** Class to parse VCF files.
* Super simple -- no validation. Just tokenizes.
* Aims to avoid parsing fields (like INFO) until necessary.
* Keeps fields in the form of ByteSequences (like strings, e... |
626972e1ee8408b211cd78ef1e742682079248d6ee000f32d74f67bfa4d6e28f | Java | 33,539 | 874 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
bfd4802f25c932e53b39a7687c43f73d4b9afa698b0d7deaa8566412cd0bfe36 | Java | 33,602 | 655 | // Generated by `RayCallGenerator.java`. DO NOT EDIT.
package io.ray.api;
import io.ray.api.call.ActorTaskCaller;
import io.ray.api.call.VoidActorTaskCaller;
import io.ray.api.function.RayFunc1;
import io.ray.api.function.RayFunc2;
import io.ray.api.function.RayFunc3;
import io.ray.api.function.RayFunc4;
import io.ra... |
4d2c02b25185b1ca795713c0fc9ab486bf840f5679769644d963c7e5de13782e | Java | 34,480 | 1,079 | // Generated by `RayCallGenerator.java`. DO NOT EDIT.
package io.ray.api.parallelactor;
import io.ray.api.ObjectRef;
import io.ray.api.function.RayFunc1;
import io.ray.api.function.RayFunc2;
import io.ray.api.function.RayFunc3;
import io.ray.api.function.RayFunc4;
import io.ray.api.function.RayFunc5;
import io.ray.ap... |
22316e6e5399935273c3eb594ee24f0a1daead2b811fb5157b803b14c42d46cd | Java | 35,358 | 1,351 | package org.opencv.core;
import java.nio.ByteBuffer;
// C++: class Mat
//javadoc: Mat
public class Mat {
public final long nativeObj;
public Mat(long addr)
{
if (addr == 0)
throw new java.lang.UnsupportedOperationException("Native object address is NULL");
nativeObj = addr;
... |
e433261b967a0fca6adeed2a94402aac4c731c51d9d618b7f09535adcd9753e5 | Java | 36,926 | 1,478 | package lychi.tautomers;
import java.util.Collection;
import java.util.List;
import java.util.ArrayList;
import java.util.Map;
import java.util.TreeMap;
import java.util.HashMap;
import java.util.Set;
import java.util.HashSet;
import java.util.Enumeration;
import java.util.Collections;
import java.util.Arrays;
import ... |
4ff5cc3ecf6686fd6d3450236f748bc4862e3a3a141b0d00484ab176ad826f13 | Java | 39,340 | 1,237 | /*
* #%L
* Modified based on Strahler.java of the ImageJ Strahler Analysis plugin by Tiago Ferreira.
*
* Major Modifications:
* Modified root selection to always select rootpoint in the ROI;
* Added eliminating endpoints at each pruning cycle;
* Added displaying Euclidean distance and shortest path distan... |
f0df0249aa9de7de0bc859e3357ea9409e3fadc2ea72a0289f7f7f403bfc7fb5 | Java | 39,410 | 1,202 | // Generated by `ParallelActorCallGenerator.java`. DO NOT EDIT.
package io.ray.api.parallelactor;
import io.ray.api.ObjectRef;
import io.ray.api.function.RayFunc0;
import io.ray.api.function.RayFunc1;
import io.ray.api.function.RayFunc2;
import io.ray.api.function.RayFunc3;
import io.ray.api.function.RayFunc4;
import... |
d0bf6cdeff45c0ef32d5269f8b01c5dd8c905d7f6490a6e1fd0a52425a7c00d4 | Java | 53,223 | 1,487 | /* Copyright 2020 The Malaria Screener Authors. All Rights Reserved.
This software was developed under contract funded by the National Library of Medicine,
which is part of the National Institutes of Health, an agency of the Department of Health and Human
Services, United States Government.
Licensed under GNU General... |
fb2ac33044548c45d19da6ffcede3f639be4353142f9ba585986afe343f0f1de | Java | 85,134 | 2,829 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.core;
import java.lang.String;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfDouble;
import org.opencv.core.MatOfInt;
import org.opencv.core.Scalar;
import org.opencv.core.TermC... |
510abea24f4f985ba1724358d21c5f38aa85b52f828d7e49aa015b9d111c0a6c | Java | 101,792 | 2,391 | /*
The copyrights of this software are owned by Duke University.
Please refer to the LICENSE and README.md files for licensing instructions.
The source code can be found on the following GitHub repository: https://github.com/wmglab-duke/ascent
*/
package model;
import com.comsol.model.*;
import com.comsol.model.physi... |
2a8fdabede765221601ae241c569cd9b401da946bbf6e32dd35d91b8e8523214 | Java | 104,948 | 1,646 | //
// This file is auto-generated. Please don't modify it!
//
package org.opencv.calib3d;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfDouble;
import org.opencv.core.MatOfPoint2f;
import org.opencv.core.MatOfPoint3f;
import org.opencv.core.Point;
import org... |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.