sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
7016a5e9754fc3002b84255c13a3a2420db161bdb8e402a1ce089346533d0a2e | C/C++ | 9,622 | 363 | /*
Copyright (c) 2006-2010, The Scripps Research Institute
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless requir... |
910fd9cf5f0b612798365b2290f0d739342cdaf2a63b90eafdf4cd04e278d8ed | C/C++ | 9,631 | 158 | // ---------------------------------------------------------------------------------------------
// --------------- WARNING: this code is generated by an automatic code generator --------------
// ---------------------------------------------------------------------------------------------
// -------------- WARNING: an... |
aab1504bafe84e87abd20226c80eda3363a32aa331b7a03c5d96339cf930f5f5 | C/C++ | 9,648 | 270 | /*
*
* Copyright (c) 2014, Laurens van der Maaten (Delft University of Technology)
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* 1. Redistributions of source code must retain the above ... |
88d077348a3c42a160fa893971d5f7d43db7f71be8543e2cdf4b8756fda72f85 | C/C++ | 9,762 | 305 | //! \file us_gmp_progress.h
//! \brief Shared, single, non-closable progress dialog for the GMP Reporter and
//! the autoflow Analysis.
#ifndef US_GMP_PROGRESS_H
#define US_GMP_PROGRESS_H
#include <QElapsedTimer>
#include <QGuiApplication>
#include <QScreen>
#include <QtWidgets>
#include "us_gui_settings.h"
/**
* @... |
a50d3df2e3db6b8dae8f336cd72b42683ef8ba69270b33f385cdbe49977fb244 | C/C++ | 9,763 | 364 | #ifndef US_HYDRODYN_BATCH_H
#define US_HYDRODYN_BATCH_H
// QT defs:
#include <qlabel.h>
#include <qstring.h>
#include <qlayout.h>
#include <qpushbutton.h>
//#include <q3frame.h>
#include <qcheckbox.h>
#include <qradiobutton.h>
#include <qwt_counter.h>
#include <qgroupbox.h>
#include <qtextedit.h>
#include <qprogressb... |
27cafecebcf428d60cb812140d2d2b82ad73ba64bc00e8d3155b9e277a7b6565 | C/C++ | 9,851 | 176 | ///////////////////////////////////////////////////////////////////////////////
// //
// This file is part of ModelBlocks. Copyright 2009, ModelBlocks developers. //
// //
... |
65dd214fee4acfd07e6b00087748a14bbfb4603f5f518e8fac86951593c5d2c2 | C/C++ | 9,854 | 240 | //! \file us_2dsa_process.h
#ifndef US_2DSA_PROCESS_H
#define US_2DSA_PROCESS_H
#include <QtCore>
#include <memory>
#include "us_dataIO.h"
#include "us_db2.h"
#include "us_extern.h"
#include "us_model.h"
#include "us_noise.h"
#include "us_sim_cache.h"
#include "us_simparms.h"
#include "us_solute.h"
#include "us_widge... |
d068104258da8b39a16acf636eaacb83b7745d7d693d8b8b0caa9033aa85dbe3 | C/C++ | 9,908 | 260 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You c... |
0aaa396f16e414d79f2d78b539d80492c6dd1bc597eab79775d66ca454815ceb | C/C++ | 9,938 | 209 | ///////////////////////////////////////////////////////////////////////////////
// //
// This file is part of ModelBlocks. Copyright 2009, ModelBlocks developers. //
// //
... |
86549a5bd91c72532a0ad92cae6e6e2c8d828fb196c461d7a0ba3ebcbd509dc4 | C/C++ | 10,022 | 237 |
///////////////////////////////////////////////////////////////////////////////
// //
// This file is part of ModelBlocks. Copyright 2009, ModelBlocks developers. //
// //... |
b52c12aae982cd184887b62cac012a26a8ed75193644a9e8426e78590459ddd4 | C/C++ | 10,034 | 226 | //! \file us_mwl_data.h
#ifndef US_MWL_DATA_H
#define US_MWL_DATA_H
#include <QtCore>
#if QT_VERSION > 0x050000
#include <QtWidgets>
#else
#include <QtGui>
#define setSingleStep(a) setStep(a)
#define setMinorPen(a) setMinPen(a)
#define setMajorPen(a) setMajPen(a)
#define setMajorPen(a) setMajPen(a)
#endif
#include "us... |
dbc3d2ee433b58c23586c9f5507d003e316d53f7dc9748fdb6839fac67a18c3c | C/C++ | 10,043 | 273 | //! \file us_data_model.h
#ifndef US_DATA_MODEL_H
#define US_DATA_MODEL_H
#include "us_extern.h"
#include "us_widgets.h"
#include "us_db2.h"
#include "us_model.h"
#include "us_noise.h"
#include "us_buffer.h"
#include "us_analyte.h"
#include "us_help.h"
#include "us_dataIO.h"
#ifndef DbgLv
#define DbgLv(a) if(dbg_leve... |
4db3350b3805e931db915046c885ff1135955a5641e7b5a38f9577d3a4880c3a | C/C++ | 10,224 | 326 | /*
Copyright (c) 2011-2013, ESN Social Software AB and Jonas Tarnstrom
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright
notice, t... |
af432e3e4affc9dcb6631f00533a79aee0f354fffedefb01982365ddccdbe279 | C/C++ | 10,240 | 183 | // ---------------------------------------------------------------------------------------------
// --------------- WARNING: this code is generated by an automatic code generator --------------
// ---------------------------------------------------------------------------------------------
// -------------- WARNING: an... |
3a07f7e5abda00da58a2bd680af34f4f30abe54c825486a8f1b9d0fd06d8b734 | C/C++ | 10,293 | 327 | /*
Copyright (c) 2011-2013, ESN Social Software AB and Jonas Tarnstrom
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright
notice, t... |
65947b932f6513de291cc3b256c30efc2afd4ebd6b6f108e822e3db7a0440668 | C/C++ | 10,304 | 352 | /* Vectorized routines for ARM NEON intrinsics.
*
* This header file, unusually, provides many complete function
* implementations so they can be inlined by the compiler.
*
* We expect to compile separately for ARMv7 versus AARCH64 platforms,
* but 128bit NEON intrinsics are essentially the same on both. A few
... |
6ac49234fa9704fb9f083dfe4161c90cacc9d2360422d04196e8c5f85b866e75 | C/C++ | 10,345 | 219 | // pdb_lite.h -- minimal PDB ATOM/HETATM reader for testing the perceiver.
// Not the production parser (SOMO has its own); just enough to feed coordinates.
#pragma once
#include <string>
#include <vector>
#include <map>
#include <fstream>
#include <cctype>
#include "us_hydrodyn_perceive_elements.h"
namespace somo_per... |
77e4fea95c50dc7f8dc522d51c6806669b0762205875815881dea77cac960da8 | C/C++ | 10,447 | 256 | #ifndef US_HYDRODYN_SAVE_H
#define US_HYDRODYN_SAVE_H
// QT defs:
#include <qlabel.h>
#include <qstring.h>
#include <qlayout.h>
#include <qpushbutton.h>
//#include <q3frame.h>
#include <qcheckbox.h>
#include <qwt_counter.h>
#include <qgroupbox.h>
#include <qtextedit.h>
#include <qprogressbar.h>
#include <qmenubar.h>
... |
39fa4fab9d7927650aba06eca270803fef9c748b79690b818e43ee78f8482f35 | C/C++ | 10,457 | 321 | /* Vectorized routines for x86 Streaming SIMD Extensions (SSE).
*
* This header file, unusually, provides many complete function
* implementations so they can be inlined by the compiler.
*
* esl_sse supports both our SSE implementations and our SSE4
* implementations. In a plain "SSE" (i.e. SSE/SSE2, e.g. HMMER3)... |
5a5ea4e75cce693fdc44f747d4e5e0fea9a7c38ffce5637951ec0be025e3e057 | C/C++ | 10,533 | 213 | //! \file us_eqmodel_control.h
//! \brief Contains the declaration of the US_EqModelControl class and its members.
#ifndef US_EQMODCTRL_H
#define US_EQMODCTRL_H
#include "us_extern.h"
#include "us_globeq_data.h"
#include "us_widgets_dialog.h"
#include "us_dataIO.h"
#include "us_analyte.h"
#include "us_buffer.h"
#inclu... |
c9e0f0ef7236174bc5641bc72127f11566cd89e39caab94d2caf40c03ec48c3a | C/C++ | 10,544 | 331 | //! \file us_plot3d.h
#ifndef US_PLOT3D_H
#define US_PLOT3D_H
#include "us_extern.h"
#include "us_model.h"
#include "us_dataIO.h"
#include "us_plot.h"
#include "us_widgets_dialog.h"
#include "us_help.h"
#include "qwt3d_types.h"
#include "qwt3d_surfaceplot.h"
#include "qwt3d_function.h"
#include "qwt3d_plot.h"
#ifndef... |
a46e366234ee8dfa688ea4d895524392f170db5162734608f35a88e3ffebc7bf | C/C++ | 10,548 | 377 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
3a50648d929c358214924dd838504492fb9a8b3bf6b280d613539ea61dee0089 | C/C++ | 10,591 | 259 | #ifndef PM_WORKER_H
#define PM_WORKER_H
#define USE_MPI
#if defined( USE_MPI )
# include <mpi.h>
extern int npes;
extern int myrank;
#endif
#include <iostream>
#include <math.h>
#include <algorithm>
#include <iterator>
#include <set>
#include <map>
#include <list>
#include <vector>
#include <string>
#include ... |
f07f5ee2d72098ade74ca29b5793109c575f92d4f6d796075ac6b962d290b618 | C/C++ | 10,602 | 190 | // somo_perceiver.h -- perceive SOMO hybrid types from element + 3D coordinates.
//
// Isolated, Qt-free. Input: a flat list of atoms (element + xyz, plus optional passthrough
// identity used only for output grouping, never for classification). Output: per-atom hybrid
// type + physics (mw / vdW radius / electrons) vi... |
0031aad5c25cb9664ae962fae4ee92a09304e60429486538991cedb62e4a6e5a | C/C++ | 10,630 | 275 | //! \file us3i_widgets.h
#ifndef US_WIDGETS_H
#define US_WIDGETS_H
#include <QtCore>
#include <QtWidgets>
#include "qwt_picker_machine.h"
#include "qwt_counter.h"
#include "qwt_plot.h"
#include "qwt_plot_grid.h"
#include "qwt_plot_picker.h"
#include "qwt_plot_curve.h"
#include "us3i_global.h"
#include "us3i_extern.h"... |
8b50b8a129914453c770a8a99aefea7a0707c2f43c3eb448f2cf7a7d1704590b | C/C++ | 10,636 | 333 | //------------------------------------------------------------------------------
//
// Intan Technologies RHX Data Acquisition Software
// Version 3.5.2
//
// Copyright (c) 2020-2026 Intan Technologies
//
// This file is part of the Intan Technologies RHX Data Acquisition Software.
//
// This program is free softw... |
a264b9efa3d25e7c36bf88b9cc90c0e8dc3c629b4858a375be8325288d4c0831 | C/C++ | 10,701 | 207 | /* Multiple sequence alignments
*/
#ifndef eslMSA_INCLUDED
#define eslMSA_INCLUDED
#include "esl_config.h"
#include <stdio.h>
#include "esl_alphabet.h" // digital alphabets
#include "esl_bitfield.h" // large bit fields (esl_msa_MarkFragments()
#include "esl_keyhash.h" // string hashes... |
ee7744bbc24e6c36970ebfeaf989ce8e27e0d545880b7aee4e183f28fdb65632 | C/C++ | 10,719 | 398 | //! \file us3i_plot.h
#ifndef US_PLOT_H
#define US_PLOT_H
#include "us3i_widgets_dialog.h"
#include "us3i_extern.h"
#include "qwt_plot.h"
#include "qwt_plot_grid.h"
#include "qwt_plot_picker.h"
#include "qwt_plot_panner.h"
#include "qwt_plot_zoomer.h"
#include "qwt_plot_curve.h"
#include "qwt_plot_canvas.h"
#include ... |
77dd07458c58a732408825b3534b59c4f68c608f27ddaf7c459819925a33f1c3 | C/C++ | 10,736 | 423 | #ifndef MODULARHH_H
#define MODULARHH_H
#include<stdio.h>
#include<ctype.h>
#include<math.h>
#include<vector>
#include<string>
struct Formula{
//byte size of enum is int, ways to force size are non portable
enum {
NONE = 0,
LINEAR_BY_EXPONENTIAL,
INVERSE_OF_TWO_EXPONENTIALS,
EXPONENTIAL_BY_EXPONENTIAL,
CL... |
3604db6f6578e5cf31b917e0dbc8eaf093a2b69969913c6e67e82491892a15b6 | C/C++ | 10,851 | 261 | ///! \file us_analysis_base2.h
#ifndef US_ANALYSIS_BASE_H
#define US_ANALYSIS_BASE_H
#include "us_extern.h"
#include "us_settings.h"
#include "us_widgets.h"
#include "us_dataIO.h"
#include "us_plot.h"
#include "us_math2.h"
#include "us_help.h"
#include "us_db2.h"
#include "us_analyte.h"
#include "us_buffer.h"
#include... |
2adcafec1713b8012da015d87756763866b29d13ee31fba29d0cfc9d4141031c | C/C++ | 10,912 | 271 | //! \file us_globalequil.h
//! \brief Contains the declaration of the US_GlobalEquil class and its members.
#ifndef US_GLOBEQUIL_H
#define US_GLOBEQUIL_H
#include "us_extern.h"
#include "us_widgets.h"
#include "us_help.h"
#include "us_plot.h"
#include "us_editor.h"
#include "us_db2.h"
#include "us_globeq_data.h"
#incl... |
2cb9951aa5513fa5d7beee96f0775f4fb9b87da8096d3c41fed5824f1f5f76e1 | C/C++ | 11,016 | 361 | //------------------------------------------------------------------------------
//
// Intan Technologies RHX Data Acquisition Software
// Version 3.5.2
//
// Copyright (c) 2020-2026 Intan Technologies
//
// This file is part of the Intan Technologies RHX Data Acquisition Software.
//
// This program is free softw... |
fe3ce25c3d1265c3a54c287ee50ef2875bdb901bdd16d0b41385e63c97f9068b | C/C++ | 11,040 | 466 | // ********************************
// Classes for vectors and matrices
//
// RDB 7/24/95
// ********************************
#pragma once
#include <iostream>
#include <fstream>
#include <cstdlib>
#include <cstdarg>
using namespace std;
#define DEBUG 0
// *******
// TVector
// *******
// The TVector class declara... |
d76036b9296a3ea967d4055665da8442a90768a902c12b82439fba54eea6eeaa | C/C++ | 11,053 | 257 | //------------------------------------------------------------------------------
//
// Intan Technologies RHX Data Acquisition Software
// Version 3.5.2
//
// Copyright (c) 2020-2026 Intan Technologies
//
// This file is part of the Intan Technologies RHX Data Acquisition Software.
//
// This program is free softw... |
2fb2239ca6823f150c9a87b889ec6e6a5f4ace94b0231a22db00e4a9e94d0c16 | C/C++ | 11,110 | 235 | ///////////////////////////////////////////////////////////////////////////////
// //
// This file is part of ModelBlocks. Copyright 2009, ModelBlocks developers. //
// //
... |
1de96c97aced2184b55ef8fc99018b59eab77062d5da7b8d68d8d0ef3d08de02 | C/C++ | 11,410 | 266 | //! \file us_integral.h
#ifndef US_INTEGRAL_H
#define US_INTEGRAL_H
#include "us_extern.h"
#include "us_widgets.h"
#include "us_help.h"
#include "us_editor.h"
#include "us_model_loader.h"
#include "us_spectrodata.h"
#include "us_plot.h"
#include "qwt_plot_marker.h"
#include "qwt_plot_layout.h"
#include "qwt_plot_zoom... |
1b158a8762c9b7daf0c132891e237457061ec0dbbcd689972aaa5a087cbe4297 | C/C++ | 11,427 | 371 | /*
Copyright (c) 2006-2010, The Scripps Research Institute
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless requir... |
e45e223c9324d39252373989c4ac58e0b4b72109a961dba10ebe41596869ebfb | C/C++ | 11,449 | 289 | //! \file us_fit_meniscus.h
//! \brief Contains the declaration of the US_FitMeniscus class and its members.
#ifndef US_FIT_MENISCUS_H
#define US_FIT_MENISCUS_H
#include <QApplication>
#include "us_extern.h"
#include "us_widgets.h"
#include "us_help.h"
#include "us_editor.h"
#include "us_plot.h"
#include "us_spectrod... |
152618281532566e4a489b7b1519bf1afcba5c02b44db2317736c36d7f130995 | C/C++ | 11,553 | 247 | //! \file us_mwl_species_fit.h
#ifndef US_MWL_SPECIES_FIT_H
#define US_MWL_SPECIES_FIT_H
#include "us_analysis_base2.h"
#include "us_editor.h"
#include "us_math2.h"
#include "us_mwl_sf_plot3d.h"
#include "us_run_protocol.h"
#include "us_protocol_util.h"
#include "../us_analysis_profile/us_analysis_profile.h"
#ifndef ... |
b20584510a344ffaf6d88cef41c981442ec99551ab006b76c3b78299f0991222 | C/C++ | 11,571 | 203 | /* esl_sq : a single biological sequence
*/
#ifndef eslSQ_INCLUDED
#define eslSQ_INCLUDED
#include "esl_config.h"
#include "esl_alphabet.h"
#include "esl_msa.h"
#include "esl_random.h" /* random, randomseq add ability to sample random sq objects for unit tests */
#include "esl_randomseq.h" /* random, ran... |
252503dc32bb7dc74c863c1e1ac8c83ef871cd958972eebb2435e6c092881b40 | C/C++ | 11,635 | 278 | //------------------------------------------------------------------------------
//
// Intan Technologies RHX Data Acquisition Software
// Version 3.5.2
//
// Copyright (c) 2020-2026 Intan Technologies
//
// This file is part of the Intan Technologies RHX Data Acquisition Software.
//
// This program is free softw... |
4f04eea8e21ba70f49f1643a8446e3b0f50908fd1bc5d3ebbc18de5c3184296e | C/C++ | 11,690 | 216 | //! \file us_vhw_enhcd.h
#ifndef US_VHW_ENHCD_H
#define US_VHW_ENHCD_H
#include "us_dataIO.h"
#include "us_analysis_base2.h"
#include "us_distrib_plot.h"
#include "us_editor.h"
#include "us_math2.h"
#include "us_model.h"
#include "us_run_details2.h"
#include "us_buffer_gui.h"
#include "qwt_plot_marker.h"
#define PA_P... |
282f9591c7efe8b3b03b9620037344ab55830a465c9638ae01473cfb733b2805 | C/C++ | 11,741 | 309 | // The code was adapted from Eigen/src/Eigenvaleus/EigenSolver.h
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2010,2012 Jitse Niesen <jitse@maths.leeds.ac.uk>
// Copyright (C) 2016 Yixuan Qiu <yixuan.qiu@cos.name>
//
// This Source Code Form is subject to the terms of the Mozilla... |
b6349209d6d6bab6a6d411d2aaa2b6b5b085d6036588e4ad834df3473258ac1a | C/C++ | 11,843 | 436 | //! \file us_xpn_viewer_gui.h
#ifndef US_XPN_VIEWERG_H
#define US_XPN_VIEWERG_H
#include <QtGui>
#include <qwt_dial.h>
#include <qpainter.h>
#include <qwt_dial_needle.h>
#include <qwt_round_scale_draw.h>
#include <qwt_wheel.h>
#include <qwt_thermo.h>
#include <qwt_scale_engine.h>
#include <qwt_transform.h>
#include <q... |
d79f1e9ec77c8b82b02aa2edcab072d850bf5c771e7fdef2a9766175a1416bd8 | C/C++ | 11,889 | 318 | //------------------------------------------------------------------------------
//
// Intan Technologies RHX Data Acquisition Software
// Version 3.5.2
//
// Copyright (c) 2020-2026 Intan Technologies
//
// This file is part of the Intan Technologies RHX Data Acquisition Software.
//
// This program is free softw... |
a15cc85597a43c44b48b4f3480f4fe05c6e6254770ea49f6fd62d3b376994df4 | C/C++ | 11,945 | 358 | // Copyright (C) 2016 Yixuan Qiu <yixuan.qiu@cos.name>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
#ifndef DOUBLE_SHIFT_QR_H
#define DOUBLE_SHIFT_QR_H
#includ... |
461bceb2c36baeb7315c8a0f9d60177295d6f901752bc7788232245576b881f4 | C/C++ | 11,948 | 163 | /******************************************************************************
sx1509_registers.h
Register definitions for SX1509.
Jim Lindblom @ SparkFun Electronics
Original Creation Date: September 21, 2015
https://github.com/sparkfun/SparkFun_SX1509_Arduino_Library
Here you'll find the Arduino code used to interf... |
56db8904d06b02dadb408928199e473db81d0135cdba577ba2fd7d3da2ac3296 | C/C++ | 12,111 | 437 | /*
Copyright (c) 2016, PyData Development Team
All rights reserved.
Distributed under the terms of the BSD Simplified License.
The full license is in the LICENSE file, distributed with this software.
Flexibly-sized, index-able skiplist data structure for maintaining a sorted
list of values
Port of Wes McKinney's Cy... |
625d75517d310055b32fd2594c2127f440a844282ce18ccde7e668ea31e89aed | C/C++ | 12,197 | 283 | ///////////////////////////////////////////////////////////////////////////////
// //
// This file is part of ModelBlocks. Copyright 2009, ModelBlocks developers. //
// //
... |
e20693f661bd7e8a3b492e997c640c6e4ba61dd6c2b25736cf28cd803614042e | C/C++ | 12,201 | 267 | //! \file us_audittrail_gmp.h
//! \brief Contains the declaration of the US_auditTrailGMP class and its members.
#ifndef US_AUDITTRAIL_GMP_H
#define US_AUDITTRAIL_GMP_H
#include <QPrinter>
#include <QProgressDialog>
#include "us_widgets.h"
#include "us_db2.h"
#include "us_passwd.h"
#include "us_run_protocol.h"
#inclu... |
aa6d92ded945313335bcab7af2cbb66c051e768ccc7a453ba0b94f9199828095 | C/C++ | 12,323 | 341 | #ifndef US_GZIP_H
#define US_GZIP_H
#include <qstring.h>
#include <qdatetime.h>
#include <sys/types.h>
#ifdef UNIX
#include <unistd.h>
#endif
#include "us_extern.h"
// Error codes
#define GZIP_OK 0
#define GZIP_NOEXIST 1
#define GZIP_NOTFILE 2
#define GZIP_NOREAD ... |
bbe26b3f71abfeee3eb12ac3484f82de992f47f74a6a34ae6ffc8b027e84f6a3 | C/C++ | 12,392 | 342 | //! \file us_minimize.h
#ifndef US_MINIMIZE_H
#define US_MINIMIZE_H
#include "us_settings.h"
#include "us_widgets.h"
#include "us_plot.h"
#include "us_util.h"
#include "us_math2.h"
#include "us_matrix.h"
#include "us_timer.h"
//! \class US_Minimize
//! \brief A class for performing minimization operations with GUI su... |
605034978537da85754479e9e37ea993ca79b02a52a3260b15c82822887885fb | C/C++ | 12,459 | 325 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2015 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
a2d10e15b0d87e522713de0ab0b30423803e0e1d270831a09b3b976693fda558 | C/C++ | 12,489 | 344 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2009 Claire Maurice
// Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2010,2012 Jitse Niesen <jitse@maths.leeds.ac.uk>
//
// This Source Code Form is subject to the terms of the M... |
ebd0742fe8d4d6f62c44e34d838cb83d68e3c449a34e6905ec5cb6fca612e0fc | C/C++ | 12,796 | 343 | //! \file us_widgets.h
#ifndef US_WIDGETS_H
#define US_WIDGETS_H
#include <QtCore>
#if QT_VERSION > 0x050000
#include <QtWidgets>
#include "qwt_picker_machine.h"
#else
#include <QtGui>
#define setSingleStep(a) setStep(a)
#define setMinorPen(a) setMinPen(a)
#define setMajorPen(a) setMajPen(a)
#endif
#include "qwt_count... |
77f672bc6439a9e534e58775f44329242f7e5afc42b98e521cc246991e006e34 | C/C++ | 12,806 | 477 | ///////////////////////////////////////////////////////////////////////////////
// //
// This file is part of ModelBlocks. Copyright 2009, ModelBlocks developers. //
// //
... |
bf79e32756f134ce660da0e7e5ca9b1ce48c30c7db8f05414c5880f5e2c67e75 | C/C++ | 12,918 | 339 | //! \file us_pseudo_absorbance.h
#ifndef US_ADD_REF_SCAN_H
#define US_ADD_REF_SCAN_H
#include "us_widgets.h"
#include "us_plot.h"
#include "us_dataIO.h"
#include "us_db2.h"
#include "us_passwd.h"
#include "qwt_plot_marker.h"
#include "us_refScan_dataIO.h"
#include "us_settings.h"
#include "us_util.h"
#include "us_imag... |
68d716bc463c11af2aeaaea5cd837d0eed9393c7783467e0bb83f24829a3475e | C/C++ | 13,077 | 329 | ///////////////////////////////////////////////////////////////////////////////
// //
// This file is part of ModelBlocks. Copyright 2009, ModelBlocks developers. //
// //
... |
5e1e5a507efc427c6d4973b26a48872555e4f67a1de82a7e570858ed868ee37c | C/C++ | 13,136 | 353 | #ifndef US_GZIP_H
#define US_GZIP_H
#include <qstring.h>
#include <sys/types.h>
#include "us3i_extern.h"
// Error codes
#define GZIP_OK 0
#define GZIP_NOEXIST 1
#define GZIP_NOTFILE 2
#define GZIP_NOREAD 3
#define GZIP_NOTGZ 4
#define GZIP_OP... |
34279153ccf0702bd80c67f5bc36a15bc92d04898bc61b3ded2bd7da5f7e380b | C/C++ | 13,329 | 577 | #ifndef PIXMAPS_H
#define PIXMAPS_H
static const char* print_xpm[]={
"32 32 12 1",
"a c #ffffff",
"h c #ffff00",
"c c #ffffff",
"f c #dcdcdc",
"b c #c0c0c0",
"j c #a0a0a4",
"e c #808080",
"g c #808000",
"d c #585858",
"i c #00ff00",
"# c #000000",
". c None",
"................................",
"......................... |
030a3e97d8d0f46f525397d4ab4b87ad9710817d36882bdcf657eca8d8a31df7 | C/C++ | 13,409 | 311 | #ifndef __plot3d_2003_06_09_12_14__
#define __plot3d_2003_06_09_12_14__
#include "qwt3d_coordsys.h"
#include "qwt3d_enrichment_std.h"
namespace Qwt3D
{
//! Base class for all plotting widgets
/*!
Plot3D handles all the common features for plotting widgets - coordinate system, transformations, mouse/ke... |
88246f4cfdcd290c71696e9610e7f6478ff98a9ef1230c1afb306aabde4117a6 | C/C++ | 13,411 | 264 | ///////////////////////////////////////////////////////////////////////////////
// //
// This file is part of ModelBlocks. Copyright 2009, ModelBlocks developers. //
// //
... |
84d8aabd025af9dc78b9cac0bef325094fae5f92c72c7641fbeca41415bef0fd | C/C++ | 13,645 | 396 | #ifndef US_HYDRODYN_BD_OPTIONS_H
#define US_HYDRODYN_BD_OPTIONS_H
// QT defs:
#include <qlabel.h>
#include <qstring.h>
#include <qlayout.h>
#include <qpushbutton.h>
#include <qradiobutton.h>
//#include <q3frame.h>
#include <qcheckbox.h>
#include <qwt_counter.h>
#include <qgroupbox.h>
//Added by qt3to4:
#include <QClo... |
a141175280e617342b99e961e3e1decabb74682dcebd8676d2e971258cd9100f | C/C++ | 13,655 | 295 | //! \file us_norm_profile.h
//! \brief Contains the declaration of the US_Norm_Profile class and its members.
#ifndef US_NORM_PROFILE_H
#define US_NORM_PROFILE_H
#include "us_settings.h"
#include "us_gui_settings.h"
#include "us_util.h"
#include "us_images.h"
#include "us_widgets.h"
#include "us_plot.h"
#include "us_... |
6cf57ce62eb567772fc2f180d01760080ba831e05413bbd3ff7c3076edb712ee | C/C++ | 13,903 | 322 | //------------------------------------------------------------------------------
//
// Intan Technologies RHX Data Acquisition Software
// Version 3.5.2
//
// Copyright (c) 2020-2026 Intan Technologies
//
// This file is part of the Intan Technologies RHX Data Acquisition Software.
//
// This program is free softw... |
8b7425b1afdbc6b14e81030baa94ed39f75437908c04b6345b34cb1a8a95b937 | C/C++ | 14,176 | 475 | #ifndef US_HYDRODYN_SAXS_BUFFER_H
#define US_HYDRODYN_SAXS_BUFFER_H
// QT defs:
#include <qlabel.h>
#include <qstring.h>
#include <qlayout.h>
#include <qpushbutton.h>
//#include <q3frame.h>
#include <qcheckbox.h>
#include <qtextedit.h>
#include <qprogressbar.h>
#include <qmenubar.h>
#include <qfileinfo.h>
#include <q... |
5e0b7caf3defbdb45ced6fb610375b968a501b16ce56e0cc7e3c83ce72818f8d | C/C++ | 14,252 | 472 | //! \file us_buffer_gui.h
#ifndef US_BUFFER_GUI_H
#define US_BUFFER_GUI_H
#include "us_extern.h"
#include "us_widgets_dialog.h"
#include "us_widgets.h"
#include "us_buffer.h"
#include "us_help.h"
#include "us_minimize.h"
#include "us_extinction_gui.h"
#include "us_extinctfitter_gui.h"
#include "us_new_spectrum.h"
#i... |
f5fb49b46d399a1653553ed96ee2b07a4573dc06a2058e3ae7c6177003a09bd9 | C/C++ | 14,256 | 342 | //! \file us_modelmetrics.h
#ifndef US_MODELMETRICS_H
#define US_MODELMETRICS_H
#include <QApplication>
#include <QDomDocument>
#include "us_analysis_base2.h"
#include "us_spectrodata.h"
#include "us_extern.h"
#include "us_widgets.h"
#include "us_help.h"
#include "us_editor.h"
#include "us_settings.h"
#include "us_gu... |
84fe688fa74886e354130381cdf935d85b7ff8a557e6f6005463fbd9cdac4987 | C/C++ | 14,269 | 320 | #import <UIKit/UIKit.h>
#import <UnityAds/UADSMediationMetaData.h>
#import <UnityAds/UADSPlayerMetaData.h>
#import <UnityAds/UADSInAppPurchaseMetaData.h>
#import <UnityAds/UnityServices.h>
#import "UADSBanner.h"
#import "UADSPurchasing.h"
#import "UANAApiAnalytics.h"
#import "UMONPlacementContent.h"
#import "UMONPromo... |
e86642fdf7f73179e8462af750495ff4b5dfae4ed5d1de05acd64be8e06e72c6 | C/C++ | 14,347 | 430 | //------------------------------------------------------------------------------
//
// Intan Technologies RHX Data Acquisition Software
// Version 3.5.2
//
// Copyright (c) 2020-2026 Intan Technologies
//
// This file is part of the Intan Technologies RHX Data Acquisition Software.
//
// This program is free softw... |
f0aa09cf49fd77e1f95c360f8edddd3a17725b8ea92f92c70efe50a182f51d72 | C/C++ | 14,493 | 424 | /*
* x86/crc32_pclmul_template.h - gzip CRC-32 with PCLMULQDQ instructions
*
* Copyright 2016 Eric Biggers
*
* Permission is hereby granted, free of charge, to any person
* obtaining a copy of this software and associated documentation
* files (the "Software"), to deal in the Software without
* restriction, inc... |
a2fca65682d8938913e4020c25c2bda7ae055dd23e0247148e0fb1662be611f2 | C/C++ | 14,566 | 277 | /*
Copyright (c) 2009-2017 Dave Gamble and cJSON contributors
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
in the Software without restriction, including without limitation the rights
to use, copy, m... |
59d581ed91b47e98f50fbea74448817f0fe1390e003c852a1687bbdc29ceaca3 | C/C++ | 14,683 | 623 | #ifndef PIXMAPS_H
#define PIXMAPS_H
static const char* print_xpm[]={
"32 32 12 1",
"a c #ffffff",
"h c #ffff00",
"c c #ffffff",
"f c #dcdcdc",
"b c #c0c0c0",
"j c #a0a0a4",
"e c #808080",
"g c #808000",
"d c #585858",
"i c #00ff00",
"# c #000000",
". c None",
"................................",
"......................... |
d04fda92630c7beb4bd5042eec58f9fc2b516ad36266b3dd5b7c595b6bf69423 | C/C++ | 14,758 | 306 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2009-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You c... |
0016a690134ab2ba76718cea7941ca5874cd6279a86eb88b3c44e0c4bb45504a | C/C++ | 15,196 | 415 | #ifndef US_HYDRODYN_PDB_TOOL_H
#define US_HYDRODYN_PDB_TOOL_H
// QT defs:
#include <qlabel.h>
#include <qstring.h>
#include <qlayout.h>
#include <qpushbutton.h>
//#include <q3frame.h>
#include <qcheckbox.h>
#include <qtextedit.h>
#include <qprogressbar.h>
#include <qmenubar.h>
#include <qfileinfo.h>
#include <qprinte... |
19a29df411ef3c5ae32ecaaebe91ecf0f0f3ed626df71528841280c9c9bb2dee | C/C++ | 15,476 | 472 | //! \file us_project_gui.h
#ifndef US_PROJECT_GUI_H
#define US_PROJECT_GUI_H
#include "us_extern.h"
#include "us_widgets.h"
#include "us_widgets_dialog.h"
#include "us_project.h"
#include "us_help.h"
/*! \class US_ProjectGuiGeneral
This class forms the content of the general tab in the US_Project GUI.
... |
24d46acd123d5673bb192b51ed6c52be41ee3c85acb2da14fb293da9314840eb | C/C++ | 15,907 | 393 | ///////////////////////////////////////////////////////////////////////////////
// //
// This file is part of ModelBlocks. Copyright 2009, ModelBlocks developers. //
// //
... |
fd0bdeae6f3edb7b07bac16a0517a2b0438166bacfeb3a0bc7094aaaeed49c6d | C/C++ | 16,175 | 562 | #ifndef US_COMPROJECT_H
#define US_COMPROJECT_H
#include <QApplication>
#if !(defined(_WIN32) || defined(_WIN64) || defined(Q_OS_WIN))
#include <unistd.h>
#endif
#include <fstream>
#include <QtSql>
#include "../us_xpn_viewer/us_xpn_viewer_gui.h"
#include "../us_experiment/us_experiment_gui_optima.h"
#include "us_expe... |
9d6358c532150bbd62f3adc5d41903cbbb954b4007680d38d7abef5a40f759ef | C/C++ | 16,191 | 497 | //! \file us_solution_gui.h
#ifndef US_SOLUTION_GUI_H
#define US_SOLUTION_GUI_H
#include "us_extern.h"
#include "us_widgets.h"
#include "us_widgets_dialog.h"
#include "us_buffer.h"
#include "us_analyte.h"
#include "us_solution.h"
#include "us_help.h"
#include "us_minimize.h"
#include "us_extinction_gui.h"
#include "u... |
8420ba3b229da983741428edf07edd41f439be238d1298119f3d042d5d33b9e0 | C/C++ | 16,337 | 517 | //! \file us_analysis_profile.h
#ifndef US_APROFG_H
#define US_APROFG_H
#include <QApplication>
#include <QtSql>
#include <functional>
#include "us_ana_profile.h"
#include "us_run_protocol.h"
#include "us_editor.h"
#include "us_settings.h"
#include "us_gui_settings.h"
#include "us_investigator.h"
#include "us_util.h... |
5129da9d6a92ba5160d500d3b75b7476a03d4bfbf321c0181a28fe129649fe7c | C/C++ | 16,429 | 297 | ///////////////////////////////////////////////////////////////////////////////
// //
// This file is part of ModelBlocks. Copyright 2009, ModelBlocks developers. //
// //
... |
8f5a118b896dd04dda386e3148e734066dad7b622d3bb9f66b36def8a49a5443 | C/C++ | 16,460 | 430 | /* blasp.h -- C prototypes for BLAS Ver 1.0 */
/* Jesse Bennett March 23, 2000 */
/* Functions listed in alphabetical order */
#ifdef F2C_COMPAT
void cdotc_(fcomplex *dotval, int *n, fcomplex *cx, int *incx,
fcomplex *cy, int *incy);
void ... |
6512d3f6e2a0e5fc7fe4c7e0394d19993b6fab3d2ea4b87a74b9f1cecd944c6d | C/C++ | 16,862 | 561 | //! \file us_analyte_gui.h
#ifndef US_ANALYTE_GUI_H
#define US_ANALYTE_GUI_H
#include "us_widgets_dialog.h"
#include "us_widgets.h"
#include "us_extern.h"
#include "us_help.h"
#include "us_editor.h"
#include "us_math2.h"
#include "us_db2.h"
#include "us_constants.h"
#include "us_analyte.h"
#include <qwt_counter.h>
#i... |
fc2edcb5ac9856f68e59015491ba48342f8174ec67d2c1f3f23249822ecc85e6 | C/C++ | 17,025 | 355 | ///////////////////////////////////////////////////////////////////////////////
// //
// This file is part of ModelBlocks. Copyright 2009, ModelBlocks developers. //
// //
... |
1bb50a3ff8c6980c1031c0e9bb324cf99df51379fdca77a358644cca841765cc | C/C++ | 17,157 | 412 | /*
* libdeflate.h - public header for libdeflate
*/
#ifndef LIBDEFLATE_H
#define LIBDEFLATE_H
#include <stddef.h>
#include <stdint.h>
#ifdef __cplusplus
extern "C" {
#endif
#define LIBDEFLATE_VERSION_MAJOR 1
#define LIBDEFLATE_VERSION_MINOR 26
#define LIBDEFLATE_VERSION_STRING "1.26"
/*
* Users of libdeflate.dl... |
d248bae7991ac27e3f75f6f16ea432ad277bcb29f9b9eca20a1f0407099eab93 | C/C++ | 17,429 | 427 | //! \file us_buoyancy.h
//! \brief Contains the declaration of the US_Buoyancy class and its members.
#ifndef US_BUOYANCY_H
#define US_BUOYANCY_H
#include "us_extern.h"
#include "us_widgets.h"
#include "us_help.h"
#include "us_plot.h"
#include "us_dataIO.h"
#include "us_simparms.h"
#include "us_editor.h"
#include "us_... |
558fd159a064a16fdf68101ba8e3e04423395c9f5d106c7953807a4d69002f98 | C/C++ | 17,698 | 499 | //! \file us_convert_gui.h
#ifndef US_CONVERT_GUI_H
#define US_CONVERT_GUI_H
#include "us_extern.h"
#include "us_widgets.h"
#include "us_help.h"
#include "us_plot.h"
#include "us_convert.h"
#include "us_experiment.h"
//#include "us_license_t.h"
//#include "us_license.h"
#include "us_dataIO.h"
#include "us_solution.h"
... |
034b46044acd5503a2e3986eef906f3a7d7922db2fecafce5cd65f07170045ba | C/C++ | 17,717 | 461 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2010 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2010-2016 Konstantinos Margaritis <markos@freevec.org>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0... |
a8bc805b6dd0a3bc731f4bfa672e8e0f30e18bd6de45c4b4d45de50889c900ac | C/C++ | 18,257 | 608 | // Copyright (c) 2013 Spotify AB
//
// Licensed under the Apache License, Version 2.0 (the "License"); you may not
// use this file except in compliance with the License. You may obtain a copy of
// the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in w... |
8838baa097c71e201543dda2c6737f5e0dd2b102c84682b563869b81062ea680 | C/C++ | 18,486 | 492 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008-2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You c... |
1fb4fa84ed80f831e6fae8fbc13985c3023ced11daa3ef8f87ff727478da3536 | C/C++ | 18,534 | 561 | //! \file us_plot.h
#ifndef US_PLOT_H
#define US_PLOT_H
#include "us_widgets_dialog.h"
#include "us_widgets.h"
#include "us_extern.h"
#include "qwt_plot.h"
#include "qwt_plot_grid.h"
#include "qwt_plot_picker.h"
#include "qwt_plot_panner.h"
#include "qwt_plot_zoomer.h"
#include "qwt_plot_curve.h"
#include "qwt_plot_c... |
c3a95b4f368720adad247df29864a947cc6d0586c96fbc6d246a89ff83d510ee | C/C++ | 18,865 | 554 | #ifndef US_HYDRODYN_PDBDEFS_H
#define US_HYDRODYN_PDBDEFS_H
#include <vector>
#include <map>
#include <iostream>
#include <qstringlist.h>
// QT defs:
#include <qstring.h>
using namespace std;
class point
{
public:
float axis[3];
friend ostream& operator<<(ostream&, const point&);
bool operator < ( const p... |
e4e5f8e3298c58c7116cf64f1c43ea1a6dcd7a9a6549520beeea88f9968767bf | C/C++ | 19,229 | 441 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can ob... |
efa7a9bc0c7154e01262c1f8b16b007870d46761b54fdecc3c8d071027840f7f | C/C++ | 19,582 | 529 | //! \file us_fematch.h
//! \brief Contains the declaration of the US_FeMatch class and its members.
#ifndef US_FEMATCH_H
#define US_FEMATCH_H
#include <QApplication>
#include <QtSvg>
#include "us_resids_bitmap.h"
#include "us_plot_control_fem.h"
#include "us_advanced_fem.h"
#include "us_dmga_mc_stats.h"
#include "us_... |
111b454c07deb54f3d7bb690860ec6aec2493077a3f209558b2c03c06017db37 | C/C++ | 19,789 | 602 | // Copyright (C) 2016 Yixuan Qiu <yixuan.qiu@cos.name>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
#ifndef UPPER_HESSENBERG_QR_H
#define UPPER_HESSENBERG_QR_H
... |
d1735c69740632b970f6dc3cc0c00b7d33012d3359895844ad75d07bd614ad0a | C/C++ | 19,940 | 534 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
// Copyright (C) 2010,2012 Jitse Niesen <jitse@maths.leeds.ac.uk>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a... |
0436ff94309d6944660bcbec1360f7932dc22327636388816adb46f176b2e6c4 | C/C++ | 20,697 | 433 | //! \file us_2dsa.h
//! \brief Contains the declaration of the US_2dsa class and its members.
#ifndef US_2DSA_H
#define US_2DSA_H
#include "us_plot_control_2d.h"
#include "us_analysis_control_2d.h"
#include "us_noise_loader.h"
#include "us_resplot_2d.h"
#include "us_dataIO.h"
#include "us_db2.h"
#include "us_solve_sim... |
9a4843cdc1cbc8cfb8d6b4c4c2e74e89035da9d656567b594ab6b408df23a3bc | C/C++ | 20,899 | 597 | // Licence at LICENSES/KLIB_LICENSE
#pragma once
#include <Python.h>
#include <pymem.h>
#include <string.h>
typedef struct {
float real;
float imag;
} khcomplex64_t;
typedef struct {
double real;
double imag;
} khcomplex128_t;
static const int KHASH_TRACE_DOMAIN = 424242;
static void *traced_malloc(size_t ... |
0fda964b5929b37530a603498a5829a7c2e11971a84c87338de8fffc70e67c9d | C/C++ | 20,910 | 532 | #ifndef US_HYDRODYN_COMPARATIVE_H
#define US_HYDRODYN_COMPARATIVE_H
// QT defs:
#include <qlabel.h>
#include <qstring.h>
#include <qlayout.h>
#include <qpushbutton.h>
//#include <q3frame.h>
#include <qcheckbox.h>
#include <qwt_counter.h>
#include <qgroupbox.h>
#include <qtextedit.h>
#include <qprogressbar.h>
#include... |
fc333cace5c44396d8ecd42ba4863a2e2b52345fdaac933fe3be292ff86c7c95 | C/C++ | 20,947 | 414 | /* VMX optimized implementation of various MSV, Viterbi, and Forward
* routines: structures, declarations, and macros.
*
* SRE, Sun Nov 25 11:23:02 2007
*/
#ifndef P7_IMPL_VMX_INCLUDED
#define P7_IMPL_VMX_INCLUDED
#include "p7_config.h"
#ifndef __APPLE_ALTIVEC__
#include <altivec.h>
#endif
#include "esl_alphabet... |
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