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/** * The `v8` module exposes APIs that are specific to the version of [V8](https://developers.google.com/v8/) built into the Node.js binary. It can be accessed using: * * ```js * const v8 = require('v8'); * ``` * @see [source](https://github.com/nodejs/node/blob/v18.0.0/lib/v8.js) */ declare module 'v8' { i...
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/** * The `os` module provides operating system-related utility methods and * properties. It can be accessed using: * * ```js * const os = require('os'); * ``` * @see [source](https://github.com/nodejs/node/blob/v18.0.0/lib/os.js) */ declare module 'os' { interface CpuInfo { model: string; s...
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import {Component, EventEmitter, OnInit, Output} from '@angular/core'; import {InputFile} from "../../classes/input-file"; import {DataService} from "../../data.service"; import {DataFrame, fromJSON, IDataFrame, Series} from "data-forge"; import {UniprotService} from "../../uniprot.service"; import {SettingsService} fr...
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import {Component, Input, OnInit, ViewChild} from '@angular/core'; import {DataService} from "../../data.service"; import {DbStringService} from "../../db-string.service"; import {InteractomeAtlasService} from "../../interactome-atlas.service"; import {DataFrame, fromCSV, IDataFrame} from "data-forge"; import {UniprotS...
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import {Component, EventEmitter, OnInit, Output} from '@angular/core'; import {InputFile} from "../../classes/input-file"; import {DataService} from "../../data.service"; import {DataFrame, fromJSON, IDataFrame, Series} from "data-forge"; import {UniprotService} from "../../uniprot.service"; import {SettingsServic...
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/** * The `console` module provides a simple debugging console that is similar to the * JavaScript console mechanism provided by web browsers. * * The module exports two specific components: * * * A `Console` class with methods such as `console.log()`, `console.error()` and`console.warn()` that can be used to wri...
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import {User} from "./curtain-user"; import axios, {AxiosHeaders} from "axios"; const base: string = "https://celsus.muttsu.xyz/" export const replacer = (key: any, value: any) => { if(value instanceof Map) { return { dataType: 'Map', value: Array.from(value.entries()), // or with ...
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/** * The `repl` module provides a Read-Eval-Print-Loop (REPL) implementation that * is available both as a standalone program or includible in other applications. * It can be accessed using: * * ```js * const repl = require('repl'); * ``` * @see [source](https://github.com/nodejs/node/blob/v18.0.0/lib/repl.js)...
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/** * The `zlib` module provides compression functionality implemented using Gzip, * Deflate/Inflate, and Brotli. * * To access it: * * ```js * const zlib = require('zlib'); * ``` * * Compression and decompression are built around the Node.js `Streams API`. * * Compressing or decompressing a stream (such as...
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export declare const Kind: unique symbol; export declare const Hint: unique symbol; export declare const Modifier: unique symbol; export type TModifier = TReadonlyOptional<TSchema> | TOptional<TSchema> | TReadonly<TSchema>; export type TReadonly<T extends TSchema> = T & { [Modifier]: 'Readonly'; }; export type TOpt...
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/** * Clusters of Node.js processes can be used to run multiple instances of Node.js * that can distribute workloads among their application threads. When process * isolation is not needed, use the `worker_threads` module instead, which * allows running multiple application threads within a single Node.js instance....
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export type Platform = 'browser' | 'node' | 'neutral' export type Format = 'iife' | 'cjs' | 'esm' export type Loader = 'base64' | 'binary' | 'copy' | 'css' | 'dataurl' | 'default' | 'empty' | 'file' | 'js' | 'json' | 'jsx' | 'text' | 'ts' | 'tsx' export type LogLevel = 'verbose' | 'debug' | 'info' | 'warning' | 'error'...
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/*! ***************************************************************************** Copyright (c) Microsoft Corporation. All rights reserved. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www....
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import { AdminClientArgs } from "./admin-client"; import { ChromaClientArgs } from "./chroma-client"; import { BaseRecordSet, IncludeEnum, Metadata, RecordSet, recordSetFields, Where, WhereDocument, } from "./types"; import { Include, SparseVector } from "./api"; import { ChromaValueError } from "./errors...
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import { createClient, createConfig } from "@hey-api/client-fetch"; import { defaultChromaClientArgs as defaultArgs, HttpMethod, normalizeMethod, parseConnectionPath, deserializeMetadata, serializeMetadata, } from "./utils"; import { AuthenticationService, CollectionService, SystemService, Checklist...
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/*! ***************************************************************************** Copyright (c) Microsoft Corporation. All rights reserved. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www....
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/*! ***************************************************************************** Copyright (c) Microsoft Corporation. All rights reserved. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www....
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/** * @file align.ts * @author Paul Pillot <paul.pillot@libmol.org> * @license MIT * @copyright 2021 * @description Routines for NW global alignment of biological sequences. * Most of this code is inspired by R.C. Edgar MUSCLE library (a). * * (a) Edgar, R.C. MUSCLE: a multiple sequence alignment method with re...
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import {Component, EventEmitter, Input, OnInit, Output} from '@angular/core'; import {DataFrame, fromCSV, IDataFrame} from "data-forge"; import {DataService} from "../../data.service"; import {UniprotService} from "../../uniprot.service"; import {SettingsService} from "../../settings.service"; import {NgbModal} from "@...
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/** * The `async_hooks` module provides an API to track asynchronous resources. It * can be accessed using: * * ```js * import async_hooks from 'async_hooks'; * ``` * @experimental * @see [source](https://github.com/nodejs/node/blob/v18.0.0/lib/async_hooks.js) */ declare module 'async_hooks' { /** * `...
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import {Component, EventEmitter, Input, OnInit, Output} from '@angular/core'; import {DataFrame, fromCSV, IDataFrame} from "data-forge"; import {DataService} from "../../data.service"; import {UniprotService} from "../../uniprot.service"; import {SettingsService} from "../../settings.service"; import {NgbModal} from "@...
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import { expect, test, beforeEach, describe } from "@jest/globals"; import { ChromaClient, CreateCollectionConfiguration, UpdateCollectionConfiguration, } from "../src"; import { DefaultEmbeddingFunction } from "@chroma-core/default-embed"; import { EmbeddingFunction, EmbeddingFunctionSpace, } from "../src/em...
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import {Component, EventEmitter, Input, OnInit, Output} from '@angular/core'; import {DataFrame, fromCSV, IDataFrame} from "data-forge"; import {DataService} from "../../data.service"; import {UniprotService} from "../../uniprot.service"; import {SettingsService} from "../../settings.service"; import {NgbModal} fr...
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/** * This module provides an implementation of a subset of the W3C [Web Performance APIs](https://w3c.github.io/perf-timing-primer/) as well as additional APIs for * Node.js-specific performance measurements. * * Node.js supports the following [Web Performance APIs](https://w3c.github.io/perf-timing-primer/): * ...
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import { Component, OnInit } from '@angular/core'; import {ActivatedRoute} from "@angular/router"; import {DataService} from "../../data.service"; import {selectionData} from "../protein-selections/protein-selections.component"; import {DataFrame, fromCSV, IDataFrame} from "data-forge"; import {Settings} from "../../cl...
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/** * HTTPS is the HTTP protocol over TLS/SSL. In Node.js this is implemented as a * separate module. * @see [source](https://github.com/nodejs/node/blob/v18.0.0/lib/https.js) */ declare module 'https' { import { Duplex } from 'node:stream'; import * as tls from 'node:tls'; import * as http from 'node:h...
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import { Component, OnInit } from '@angular/core'; import {ActivatedRoute} from "@angular/router"; import {DataService} from "../../data.service"; import {selectionData} from "../protein-selections/protein-selections.component"; import {DataFrame, fromCSV, IDataFrame} from "data-forge"; import {Settings} from "../...
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import { describe, expect, jest, test } from "@jest/globals"; import { K, Knn, Rrf, Search, SearchResult, Val, toSearch } from "../src"; import type { SearchResponse, SparseVector } from "../src/api"; import { CollectionImpl } from "../src/collection"; import type { CollectionConfiguration } from "../src/collection-con...
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/** * The `readline` module provides an interface for reading data from a `Readable` stream (such as `process.stdin`) one line at a time. * * To use the promise-based APIs: * * ```js * import * as readline from 'node:readline/promises'; * ``` * * To use the callback and sync APIs: * * ```js * import * as re...
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/** * The `dgram` module provides an implementation of UDP datagram sockets. * * ```js * import dgram from 'dgram'; * * const server = dgram.createSocket('udp4'); * * server.on('error', (err) => { * console.log(`server error:\n${err.stack}`); * server.close(); * }); * * server.on('message', (msg, rinfo...
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#!/usr/bin/env bun /** * Generate TypeScript SDK reference documentation for Chroma. * * Usage: * bun run generate_ts_reference.ts --output reference/typescript/ * * Writes client.mdx, collection.mdx, embedding-functions.mdx, search.mdx, and schema.mdx. * The file reference/typescript/where-filter.mdx is mai...
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/** * The `vm` module enables compiling and running code within V8 Virtual * Machine contexts. * * **The `vm` module is not a security** * **mechanism. Do not use it to run untrusted code.** * * JavaScript code can be compiled and run immediately or * compiled, saved, and run later. * * A common use case is t...
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/** * Copyright (c) Meta Platforms, Inc. and affiliates. * * This source code is licensed under the MIT license found in the * LICENSE file in the root directory of this source tree. */ /// <reference types="node" /> import type {Arguments} from 'yargs'; import type {CoverageMapData} from 'istanbul-lib-coverage';...
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/** * The `dns` module enables name resolution. For example, use it to look up IP * addresses of host names. * * Although named for the [Domain Name System (DNS)](https://en.wikipedia.org/wiki/Domain_Name_System), it does not always use the * DNS protocol for lookups. {@link lookup} uses the operating system * fa...
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/** * The `node:test` module provides a standalone testing module. * @see [source](https://github.com/nodejs/node/blob/v18.x/lib/test.js) */ declare module 'node:test' { /** * Programmatically start the test runner. * @since v18.9.0 * @param options Configuration options for running tests. * ...
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// This file is auto-generated by @hey-api/openapi-ts import type { Options as ClientOptions, TDataShape, Client } from '@hey-api/client-fetch'; import type { GetUserIdentityData, GetUserIdentityResponse2, GetUserIdentityError, GetCollectionByCrnData, GetCollectionByCrnResponse, GetCollectionByCrnError, HealthcheckDat...
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/** * Much of the Node.js core API is built around an idiomatic asynchronous * event-driven architecture in which certain kinds of objects (called "emitters") * emit named events that cause `Function` objects ("listeners") to be called. * * For instance: a `net.Server` object emits an event each time a peer * con...
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/** * The `worker_threads` module enables the use of threads that execute JavaScript * in parallel. To access it: * * ```js * const worker = require('worker_threads'); * ``` * * Workers (threads) are useful for performing CPU-intensive JavaScript operations. * They do not help much with I/O-intensive work. The...
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/** * @file noalign * @author Paul Pillot <paul.pillot@libmol.org> * @license MIT * @copyright 2021 * @description This module contains code to make a fast alignment computation * without doing the full Dynamic Programming routine as it is overexpensive * for long sequences, running in O(n2) time and space. For ...
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/*! ***************************************************************************** Copyright (c) Microsoft Corporation. All rights reserved. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www....
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/** * The `url` module provides utilities for URL resolution and parsing. It can be * accessed using: * * ```js * import url from 'url'; * ``` * @see [source](https://github.com/nodejs/node/blob/v18.0.0/lib/url.js) */ declare module 'url' { import { Blob as NodeBlob } from 'node:buffer'; import { Client...
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/** * The `assert` module provides a set of assertion functions for verifying * invariants. * @see [source](https://github.com/nodejs/node/blob/v18.0.0/lib/assert.js) */ declare module 'assert' { /** * An alias of {@link ok}. * @since v0.5.9 * @param value The input that is checked for being trut...
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/** * > Stability: 2 - Stable * * The `net` module provides an asynchronous network API for creating stream-based * TCP or `IPC` servers ({@link createServer}) and clients * ({@link createConnection}). * * It can be accessed using: * * ```js * const net = require('net'); * ``` * @see [source](https://github...
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/** * > Stability: 2 - Stable * * The `net` module provides an asynchronous network API for creating stream-based * TCP or `IPC` servers ({@link createServer}) and clients * ({@link createConnection}). * * It can be accessed using: * * ```js * const net = require('net'); * ``` * @see [source](https://github...
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import type { EmbeddingFunctionConfiguration, HnswIndexConfig as ApiHnswIndexConfig, Schema as InternalSchema, Space, SpannIndexConfig as ApiSpannIndexConfig, ValueTypes as ApiValueTypes, } from "./api"; import { AnyEmbeddingFunction, EmbeddingFunction, getEmbeddingFunction, getSparseEmbeddingFuncti...
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import { ChangeDetectorRef, Component, OnInit, ViewChild, ViewChildren } from '@angular/core'; import { Router } from '@angular/router'; import { PubmedService } from '../services/pubmed.service'; import { AcronymService } from '../services/acronym.service'; import { MongodbService } from '../services/mongodb.service';...
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/** * The `fs/promises` API provides asynchronous file system methods that return * promises. * * The promise APIs use the underlying Node.js threadpool to perform file * system operations off the event loop thread. These operations are not * synchronized or threadsafe. Care must be taken when performing multiple...
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/** * The `fs/promises` API provides asynchronous file system methods that return * promises. * * The promise APIs use the underlying Node.js threadpool to perform file * system operations off the event loop thread. These operations are not * synchronized or threadsafe. Care must be taken when performing multiple...
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import { ChromaClient } from "./chroma-client"; import { EmbeddingFunction, SparseEmbeddingFunction, } from "./embedding-function"; import { BaseRecordSet, CollectionMetadata, DeleteResult, GetResult, IndexingStatus, Metadata, PreparedRecordSet, PreparedInsertRecordSet, QueryRecordSet, QueryResu...
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// Type definitions for yargs 17.0 // Project: https://github.com/chevex/yargs, https://yargs.js.org // Definitions by: Martin Poelstra <https://github.com/poelstra> // Mizunashi Mana <https://github.com/mizunashi-mana> // Jeffery Grajkowski <https://github.com/pushplay> // ...
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/** * The `tls` module provides an implementation of the Transport Layer Security * (TLS) and Secure Socket Layer (SSL) protocols that is built on top of OpenSSL. * The module can be accessed using: * * ```js * const tls = require('tls'); * ``` * @see [source](https://github.com/nodejs/node/blob/v18.0.0/lib/tls...
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// This file is auto-generated by @hey-api/openapi-ts export type AddAttachedFunctionInputRequest = { input_collection_id: CollectionUuid; }; export type AddAttachedFunctionInputResponse = { attached_function: AttachedFunctionApiResponse; created: boolean; }; /** * Payload for adding records to a collec...
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/** * The `child_process` module provides the ability to spawn subprocesses in * a manner that is similar, but not identical, to [`popen(3)`](http://man7.org/linux/man-pages/man3/popen.3.html). This capability * is primarily provided by the {@link spawn} function: * * ```js * const { spawn } = require('child_proc...
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import { CollectionImpl } from "../src/collection"; import type { CollectionConfiguration } from "../src/collection-configuration"; import type { CollectionMetadata } from "../src/types"; import { registerEmbeddingFunction, registerSparseEmbeddingFunction, EmbeddingFunction, SparseEmbeddingFunction, } from "../...
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declare module 'process' { import * as tty from 'node:tty'; import { Worker } from 'node:worker_threads'; global { var process: NodeJS.Process; namespace NodeJS { // this namespace merge is here because these are specifically used // as the type for process.stdin, pro...
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/** * To use the HTTP server and client one must `require('http')`. * * The HTTP interfaces in Node.js are designed to support many features * of the protocol which have been traditionally difficult to use. * In particular, large, possibly chunk-encoded, messages. The interface is * careful to never buffer entire...
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/** * To use the HTTP server and client one must `require('http')`. * * The HTTP interfaces in Node.js are designed to support many features * of the protocol which have been traditionally difficult to use. * In particular, large, possibly chunk-encoded, messages. The interface is * careful to never buffer entire...
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/** * A stream is an abstract interface for working with streaming data in Node.js. * The `stream` module provides an API for implementing the stream interface. * * There are many stream objects provided by Node.js. For instance, a `request to an HTTP server` and `process.stdout` are both stream instances. * * St...
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/** * A stream is an abstract interface for working with streaming data in Node.js. * The `stream` module provides an API for implementing the stream interface. * * There are many stream objects provided by Node.js. For instance, a `request to an HTTP server` and `process.stdout` are both stream instances. * * St...
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/** * The `util` module supports the needs of Node.js internal APIs. Many of the * utilities are useful for application and module developers as well. To access * it: * * ```js * const util = require('util'); * ``` * @see [source](https://github.com/nodejs/node/blob/v18.x/lib/util.js) */ declare module 'util' ...
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/** * The `util` module supports the needs of Node.js internal APIs. Many of the * utilities are useful for application and module developers as well. To access * it: * * ```js * const util = require('util'); * ``` * @see [source](https://github.com/nodejs/node/blob/v18.x/lib/util.js) */ declare module 'util' ...
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// Type definitions for mocha 10.0 // Project: https://mochajs.org // Definitions by: Kazi Manzur Rashid <https://github.com/kazimanzurrashid> // otiai10 <https://github.com/otiai10> // Vadim Macagon <https://github.com/enlight> // Andrew Bradley <https://github.com/cspot...
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/** * `Buffer` objects are used to represent a fixed-length sequence of bytes. Many * Node.js APIs support `Buffer`s. * * The `Buffer` class is a subclass of JavaScript's [`Uint8Array`](https://developer.mozilla.org/en-US/docs/Web/JavaScript/Reference/Global_Objects/Uint8Array) class and * extends it with methods ...
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/** * `Buffer` objects are used to represent a fixed-length sequence of bytes. Many * Node.js APIs support `Buffer`s. * * The `Buffer` class is a subclass of JavaScript's [`Uint8Array`](https://developer.mozilla.org/en-US/docs/Web/JavaScript/Reference/Global_Objects/Uint8Array) class and * extends it with methods ...
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/** * The `http2` module provides an implementation of the [HTTP/2](https://tools.ietf.org/html/rfc7540) protocol. It * can be accessed using: * * ```js * const http2 = require('http2'); * ``` * @since v8.4.0 * @see [source](https://github.com/nodejs/node/blob/v18.0.0/lib/http2.js) */ declare module 'http2' { ...
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// eslint-disable-next-line dt-header // Type definitions for inspector // These definitions are auto-generated. // Please see https://github.com/DefinitelyTyped/DefinitelyTyped/pull/19330 // for more information. // tslint:disable:max-line-length /** * The `inspector` module provides an API for interacting with th...
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/* eslint-disable */ // tslint:disable /** * chroma-frontend * * * OpenAPI spec version: 1.0.0 * * * NOTE: This class is auto generated by OpenAPI Generator+. * https://github.com/karlvr/openapi-generator-plus * Do not edit the class manually. */ import { Configuration } from "./configuration"; import { BA...
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/** * The `fs` module enables interacting with the file system in a * way modeled on standard POSIX functions. * * To use the promise-based APIs: * * ```js * import * as fs from 'fs/promises'; * ``` * * To use the callback and sync APIs: * * ```js * import * as fs from 'fs'; * ``` * * All file system op...
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/** * The `fs` module enables interacting with the file system in a * way modeled on standard POSIX functions. * * To use the promise-based APIs: * * ```js * import * as fs from 'fs/promises'; * ``` * * To use the callback and sync APIs: * * ```js * import * as fs from 'fs'; * ``` * * All file system op...
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/** * The `crypto` module provides cryptographic functionality that includes a set of * wrappers for OpenSSL's hash, HMAC, cipher, decipher, sign, and verify functions. * * ```js * const { createHmac } = await import('crypto'); * * const secret = 'abcdefg'; * const hash = createHmac('sha256', secret) * ...
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/** * The `crypto` module provides cryptographic functionality that includes a set of * wrappers for OpenSSL's hash, HMAC, cipher, decipher, sign, and verify functions. * * ```js * const { createHmac } = await import('crypto'); * * const secret = 'abcdefg'; * const hash = createHmac('sha256', secret) * ...
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/*! ***************************************************************************** Copyright (c) Microsoft Corporation. All rights reserved. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www....
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/*! ***************************************************************************** Copyright (c) Microsoft Corporation. All rights reserved. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www....
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/*! ***************************************************************************** Copyright (c) Microsoft Corporation. All rights reserved. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www....
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/*! ***************************************************************************** Copyright (c) Microsoft Corporation. All rights reserved. Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www....