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1c62e97b965d7a04254bb315675e41ac5b2131070c04ff826422b53998176847
Shell
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#!/bin/bash # VIRUS="$1"; ORGAN="$2"; MAX_DEPTH=1000; # #TOTAL_COVERAGE=`awk '{sum += (($3-$2)*$4)} END {print sum}' ../output_data/TRACES_viral_bed/$VIRUS-coverage-$ORGAN.bed `; TOTAL_SIZE=`tail -n 1 ../output_data/TRACES_viral_bed/$VIRUS-coverage-$ORGAN.bed | awk '{ print $3}'`; acc=$(head -1 ../output_data/TRACES_vi...
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Shell
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## Program: VMTK ## Language: Python ## Date: January 30, 2018 ## Version: 1.4 ## ## Copyright (c) Richard Izzo, Luca Antiga, All rights reserved. ## See LICENSE file for details. ## ## This software is distributed WITHOUT ANY WARRANTY; without even ## the implied warranty of MERCHANTABILITY or FI...
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Shell
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#!/bin/bash #SBATCH --time=1:00:00 # walltime #SBATCH --ntasks=1 # number of processor cores (i.e. tasks) #SBATCH --nodes=1 # number of nodes #SBATCH --mem-per-cpu=15360M # memory per CPU core #SBATCH -J "preproc2" # job name # Compatibility variables for PBS. Delete if not needed. export PBS_NODEFILE=`/fsl...
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Shell
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#!/bin/bash # # ============================================================================== # HAPLOGROUP INFERENCE THROW THE ANALYSIS OF SPECIFIC PATTERNS IN Y CHROMOSOME # ============================================================================== # # REQUIREMENTS: # [x] cy.fa [GRC38] needed : run ./ki_get_...
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#!/bin/sh ### Job name #PBS -N indexVert ### Number of nodes ##PBS -l nodes=1:ppn=8 #PBS -l nodes=1:ppn=64 #PBS -q bigmem #PBS -j oe cd /gpfs/scratch/fas/gerstein/rrk24/ANNOTATIONS/Genomes_BacteriaFungiMammalPlantProtistVirus mkdir STAR_GENOME_VERTEBRATE1 /gpfs/scratch/fas/gerstein/rrk24/bin/STAR_2.4.0i/bin/Linux_x8...
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Shell
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#!/bin/bash output_dir=$1 # files with links to the data to be downloaded SCRIPT_DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )" data_links="${SCRIPT_DIR}/links_verm_data.txt" references_links="${SCRIPT_DIR}/links_verm_references.txt" mkdir -p $output_dir # make a tmp dir for all the downloads ...
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Shell
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#!/bin/bash # ----------------------------------------------------------------------------- # cli_glm_api.sh - CLI wrapper for run_glm.py # This script is called by qsub.sh and passes parameters to the Python GLM code # ----------------------------------------------------------------------------- echo "Subject: ${sub}...
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Shell
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#!/bin/bash # REF="$1"; SCAFFOLDS="$2"; THREADS="$3"; ORGAN="$4"; viralConsensus="$5"; # # if [ ! -f "$viralConsensus" ]; then echo -e "\e[38;5;208mWARNING: $viralConsensus reference file not found!\e[0m" echo "TIP: before this, run: ./TRACESPipe.sh --run-meta --run-all-v-alig" echo -e "\e[38;5;198mDon't panic!...
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Shell
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#!/bin/bash # # ============================================================================== # | POPULATION INFERENCE FROM THE ANALYSIS OF SPECIFIC PATTERNS IN AUTOSOMES | # ============================================================================== # # REQUIREMENTS: # [x] autosome_snps_data.csv # # INSTALLAT...
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Shell
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#!/bin/sh program="encyclopedia"; #program="xcordia";: # think about auto version finder here: #minor=`awk '/<version>/ {split($1, a, "."); split(a[3], b, "-"); print b[1]; exit 1}' pom.xml`; #mp1=$((minor+1)); #if [ "$#" -ne 2 ]; then # echo "You must specify a current and a target version (e.g. \"increment_versio...
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# """ # MIT License # Copyright (c) 2024-2025 Yongning Lei # Permission is hereby granted, free of charge, to any person obtaining a copy of this software # and associated documentation files (the "Software"), to deal in the Software without restriction, # including without limitation the rights to use, copy, modify,...
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Shell
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#!/bin/bash # to measure average power consumed in 30sec with 1sec sampling interval # defines duration of measurement, interval of measurement (both in seconds) # and the measureable rails outfile="$HOME/monitor_results.txt" duration=30 interval=1 RAILS=("VDD_IN /sys/bus/i2c/drivers/ina3221x/0-0041/iio:device1/in_pow...
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#!/bin/bash set -e usage() { cat << EOF usage: bash $0 OPTIONS TARGETS examples: Run python tests on CPU: bash $0 -c tests/compute/test_subgraph.py Run python tests on GPU: bash $0 -g tests/compute/test_subgraph.py Run DGL python tests. OPTIONS: -h Show this message. -c Run python tests ...
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Shell
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#!/bin/bash #SBATCH -p steinlab #SBATCH -n 1 #SBATCH --mem=8g #SBATCH -t 3:00:00 module add plink module add emmax i=$1 chr=$2 plink --bfile /proj/steinlab/projects/R00/atac-qtl/GenotypeData/PlinkData_original/QCMergedData/allmgergedGenoMafHweQCnew \ --chr $chr --keep ../progenitor.eqtl.donor.sorted.txt \ ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=12 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-02 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=16 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=4000 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=8 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
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Shell
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=16 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
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Shell
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-02 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=14 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=4000 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=16 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=4 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=44 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=48362 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f02-07 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=25786 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-13 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=24 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=24181 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-15 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=1 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-01 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-11 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=30 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=30 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=56 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f02-05 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-11 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=40 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=48 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=48 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=56 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=40 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-11 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=10 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-11 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f02-07 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-11 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=20 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=24181 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-11 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=30 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=48 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=48 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=48362 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=30 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
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Shell
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-11 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=4 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-15 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-01 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
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#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=25786 ...
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33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-13 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
71a96657eae43f694ec31001b2280d3717495811648922342cc08b2cc4426952
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=44 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
80d1e17112290d81239a7e869128fed411c51ebcc0239b0fed50f329c893f2bc
Shell
1,454
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-01 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
8ad3a25ce9f3b412237033f3358ee31a343616064839739f059dad54d616eebb
Shell
1,454
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-13 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
90c3b62b8807845714ef699e1d8e37202e4040f684a6a10f7661097e4a6a338a
Shell
1,454
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f02-07 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
9105c8cac096a99ebc627fba1f9263cca0db1ece51d6812dc4967fdcafe63d41
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=56 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
99d195547f90c817eb4e35a4c9bfbc15a29500dd5fdecb6e5207cb9ede6414de
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=24 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
9aeed04d79edec7570a5cf6a27992b984d8432265f40449321e9c8b0616e5f28
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=48 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
a4068db483fd96637e971fbc792cac6532bb5f0593f74bc2411baab53b285ad7
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=25786 ...
a45ec628e24d87fc4bd9831af2a675289feb496566e28932c1c679e56a0a9603
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=30 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
b2435214c29bfa976b39af80cd4e16c415159e8f672ba4373f739274f244996d
Shell
1,454
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f02-05 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
b73a9f754542f075f3b8f6577e40de130dd24aea2505a9b42d3632add1765d7f
Shell
1,454
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-15 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
b746ed0dcf7d204f97e1e318ceb70691c08f69df8374f0df44502af9c18a8a5b
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=30 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
c781220bfa8dfea3e5a7b62abf931da26d8e73be7bc8733d38a3a07d40ea1fe7
Shell
1,454
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-11 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
cdde043aaf8de40fc5e9971e6e4b6b248cd87ea8481931ae7cda526c1a5c2ac2
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=44 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
ce0b85487de9d9c40b206c66c30b754a8953e2ad4462fa8745eac8c9c45cfd89
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=40 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12000 ...
d53bdbed6b7684a41415e75afc31143b59e98d8a0e03aac6a5de25df2f0a31d4
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=48362 ...
d626e55da874ba7e1460d789c4977bee48b330f0337cee3304f5d92bee5521b7
Shell
1,454
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f02-05 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
d88121fe342bd528d5dfbd83f64eaaff0c2a69e05d98d2563abbd58c5d0e2c39
Shell
1,454
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-11 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=4 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
e6a5ffe97e5b08516524870273843d06e5e1cb7c99663c6bad2990f2d003d938
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=24 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
e75d08aeb33494fe1b3543ffb2fb2a0fd54859d85125997ca86975e6f86b4e68
Shell
1,454
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-13 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=4 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16093 ...
eda7d373065aa2583a2aef13f0cd88813b60185dcf8768c5c43b9c62e5bab420
Shell
1,454
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=32 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=24181 ...
bd5c61c52679180e83c513f7a584344db4f1c4fd39394872e660c4787010d2bd
Shell
1,468
88
#!/bin/bash # input arguments DATA="${1-DD}" # ENZYMES, DD, PROTEINS, COLLAB, IMDB-BINARY, IMDB-MULTI device=${2-0} num_trials=${3-10} print_every=${4-10} # general settings hidden_gxn=96 k1=0.8 k2=0.7 sortpooling_k=30 hidden_final=128 batch_size=64 dropout=0.5 cross_weight=1.0 fuse_weight=0.9 weight_decay=1e-3 # ...
0173bd26129aba55fad3d93ff444f12806ace7cfca0cdd981197a5094a55e40f
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-02 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=35 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=4000 ...
045486e87b5a4b38ab3d0cd51785b20a012bcd9110d43f48efe2787f57f824a5
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=30 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
06cbc672f4bd21fabf20eecebb10d281163c5250bfeec6c0d208dd80dbc87343
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=72 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
0a18acf0c704308f6dc905dcf5b4d0d8697ebfbd48c79163f506de99c3b0d858
Shell
1,470
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-11 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=64 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=8046 ...
0da929d6becedd743e189fa0b80443f7e8e1ebc0126dfb85c64add521e5fdc8f
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=35 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
0f8a4c126af82117c2f3b86e4ee9e5f04b8f635d6f726504b0ebc03b49db8de7
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=64 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
131ace177f3408f4b77385925b988b4d2397f0dc8cfe8ea941247b3fadbb76fc
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=96 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
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Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=40 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
175f9ac07c3f74cf27cbcd3e2de0244d141a8d2c24931f54f00850c4b53edf5e
Shell
1,470
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f03-01 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=64 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=8046 ...
197b3a7d448f257df4c81347b711c91d0c97ce1ae7c2de2e21904be1e454a3ad
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=75 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
1eb9f7065ed44917dcd8592ff97e09951596e4728a86c66b8fce7d326521a2e4
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=64 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...
24000f070a35962796c046c047fc79013b6760e81ef9089ed83913e7bcccb87c
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=30 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
2871473714de11cebc926a80c9560a500dc96c8f3e1493a8a86145e14f060c0c
Shell
1,470
33
#!/bin/bash #SBATCH --partition=epyc # the requested queue #SBATCH --nodelist=f02-14 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=192 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=2682 ...
32877d0885c069a276c5106205cb697846f7436b53a8058faac6175a500337eb
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=70 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
3fd23e21871ac6c35b564f9e32f0cfe5db59ca128129ebdbea8e6cfe6d2cb4b8
Shell
1,470
33
#!/bin/bash #SBATCH --partition=jumbo # the requested queue #SBATCH --nodelist=f02-07 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=64 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=8046 ...
415b6806d1fa2dabb8ba08174c6853979966e818c21ff10aebc269b4fdf7bab1
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=78 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
4ae96d94e39babfd364d1c4b4c690b1e965f7d07b5faca40c47d10d8fc29a441
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=45 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
4cd7913e868d052fe0ec720554383938cc1a2699d0e96816ba177522a44378d9
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=65 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
4ec326813780304ce6f4be20ea45066dff1f0a491ca28063fb0a90be92e2200c
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f03-24 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=20 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=16120 ...
5cd8789174d5aac81e775a1acaf43c980934bce1bd5f0a2e8bde77f7a24e1b6d
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-02 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=28 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=4000 ...
66a3f9980cd7c35be861b73ea87382fe8cce59cf3d4820a3c806195c2ab08e33
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-02 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=30 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=4000 ...
66dbef01988ac88f0f8787e87d68728912684fabe26f26dc2772e2401b9d203a
Shell
1,470
33
#!/bin/bash #SBATCH --partition=mammoth # the requested queue #SBATCH --nodelist=f02-10 #SBATCH --job-name=THALAMOCORTICAL # name the job #SBATCH --nodes=1 # number of nodes to use #SBATCH --ntasks=76 # total number of tasks (preocesses) #SBATCH --mem-per-cpu=12893 ...