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def add_change_in_new_deaths(df, target_days): deaths_cols = df.filter(regex='#Deaths_').columns latest_date_str = deaths_cols[(- 1)].replace('#Deaths_', '') latest_date = datetime.strptime(latest_date_str, '%m-%d-%Y').date() time_deltas = [timedelta(days=int(day)) for day in target_days] plot_dates...
class CloseGripperOption(AbstractOption): def __init__(self, position=None, **kwargs): super(CloseGripperOption, self).__init__(name='close_gripper') self.position = position def makePolicy(self, world): return (CloseGripperPolicy(pos=self.position), TimeCondition((world.time() + 0.8))) ...
def get_metrics(p_seq1, p_seq2, o_seq1, o_seq2): psim = pitch_similarity(p_seq1, p_seq2) osim = onset_similarity(o_seq1, o_seq2) pc = cross_correlation(p_seq1, p_seq2) oc = cross_correlation(o_seq1, o_seq2) return (psim, osim, pc, oc)
class BaselineDataset(Dataset): def __init__(self, dataset=None, baseline=None): super(BaselineDataset, self).__init__() self.dataset = dataset self.baseline = baseline assert (len(self.dataset) == len(self.baseline)) def __getitem__(self, item): return {'data': self.data...
def gumbel_softmax_sample(logits, tau=1, eps=1e-10, dim=(- 1)): gumbel_noise = sample_gumbel(logits.size(), eps=eps) if logits.is_cuda: gumbel_noise = gumbel_noise.cuda() y = (logits + Variable(gumbel_noise)) return F.softmax((y / tau), dim=dim)
class DFA(nn.Module): def __init__(self, features, M=2, r=1, L=32): super(DFA, self).__init__() self.M = M self.features = features d = max(int((self.features / r)), L) self.fc = nn.Sequential(nn.Conv1d(self.features, d, kernel_size=1), nn.BatchNorm1d(d)) self.fc_out ...
def tarfile_to_samples_nothrow(src, handler=wds.warn_and_continue): streams = url_opener(src, handler=handler) files = tar_file_expander(streams, handler=handler) samples = group_by_keys_nothrow(files, handler=handler) return samples
class FALoss(torch.nn.Module): def __init__(self, subscale=0.0625): super(FALoss, self).__init__() self.subscale = int((1 / subscale)) def forward(self, feature1, feature2): feature1 = torch.nn.AvgPool2d(self.subscale)(feature1) feature2 = torch.nn.AvgPool2d(self.subscale)(featur...
def get_random_digit_image(): indx = randint(0, (len(images) - 1)) img = images[indx][0] return img
def main(opt=None, inputs=None, isEvaluate=False): if (not opt): parser = argparse.ArgumentParser() parser.add_argument('--bert_model', default=None, type=str, required=True, help='Bert pre-trained model selected in the list: bert-base-uncased, bert-large-uncased, bert-base-cased, bert-base-multilin...
def dict_gather(comm, d, op='mean', assert_all_have_data=True): if (comm is None): return d alldicts = comm.allgather(d) size = comm.size k2li = defaultdict(list) for d in alldicts: for (k, v) in d.items(): k2li[k].append(v) result = {} for (k, li) in k2li.items()...
class FrameLevel(nn.Module): def __init__(self, input_dim, output_dim, hiddens=None, activation='ReLU', **kwargs): super().__init__() latest_dim = input_dim self.hiddens = [] if (hiddens is not None): for dim in hiddens: self.hiddens += [nn.Linear(latest_d...
class CachedAttribute(object): def __init__(self, method, name=None): self.method = method self.name = (name or method.__name__) def __get__(self, obj, objtype): if (obj is None): return self elif (self.name in obj.__dict__): return obj.__dict__[self.name]...
class Statistics(object): def __init__(self, loss=0, n_words=0, n_correct=0): self.loss = loss self.n_words = n_words self.n_correct = n_correct self.n_src_words = 0 self.start_time = time.time() def all_gather_stats(stat, max_size=4096): stats = Statistics.all_ga...
def test_add_batch_all_new(data): add_info = data.archive.add(solution=([[1, 2, 3]] * 4), objective=[0, 0, 0, 1], measures=[[0, 0], [0.25, 0.25], [0.5, 0.5], [0.5, 0.5]]) assert (add_info['status'] == 2).all() assert np.isclose(add_info['value'], [0, 0, 0, 1]).all() assert_archive_elites(archive=data.ar...
class BoundTransform(Transformation): def __init__(self, x_bound, y_bound): super().__init__(BoundedScaler(x_bound), BoundedScaler(y_bound))
def get_labels(path): with open(path, 'r') as f: labels = f.read().splitlines() if ('O' not in labels): labels = (['O'] + labels) return labels
class DenseNet(nn.Module): def __init__(self, growth_rate=8, block_config=(6, 12, 24, 16), num_init_features=16, bn_size=4, drop_rate=0, pretrained=False): super(DenseNet, self).__init__() self.start_features = nn.Sequential(OrderedDict([('conv0', nn.Conv2d(3, num_init_features, kernel_size=7, strid...
def vis(model, loader, save_dir, rank=None, world_size=1): attention_dir = os.path.join(save_dir, 'attention_probs') hidden_dir = os.path.join(save_dir, 'hidden_states') cos_dir = os.path.join(save_dir, 'cos_similarity') if (not os.path.exists(attention_dir)): makedirsExist(attention_dir) mo...
class Storage(_IOMixin, metaclass=ABCMeta): def __init__(self) -> None: super().__init__() self._storage = defaultdict(HistoricalContainer) def __enter__(self): return self def __exit__(self, exc_type, exc_val, exc_tb): pass def put(self, name: str, value: Dict[(str, floa...
class dAUTOMAP(nn.Module): def __init__(self, input_shape, output_shape, tfx_params, tfx_params2=None): super(dAUTOMAP, self).__init__() self.input_shape = input_shape self.output_shape = output_shape if (tfx_params2 is None): tfx_params2 = tfx_params self.domain_...
def run_retraining(args: Any, test_only: bool=False, distributed: bool=False, batch_size: int=32, lr: float=0.01, train_epochs: int=20) -> tuple[(Any, int, int, int)]: (model_name, model, state_dict, data_loader_train, data_loader_val, args_checkpoint, halut_modules, checkpoint) = load_model(args.checkpoint, distri...
def _xgboost_min_child_weight(name): return scope.int(hp.loguniform(name, np.log(1), np.log(100)))
class TemperatureLogitsWarper(): def __init__(self, *args, **kwargs): requires_pytorch(self)
class GridAnchorGeneratorTest(tf.test.TestCase): def test_construct_single_anchor(self): scales = [0.5, 1.0, 2.0] aspect_ratios = [0.25, 1.0, 4.0] anchor_offset = [7, (- 3)] exp_anchor_corners = [[(- 121), (- 35), 135, 29], [(- 249), (- 67), 263, 61], [(- 505), (- 131), 519, 125], [(...
def main(): result_file = os.path.join(settings.RESULT, 'result.csv') if (not os.path.exists(result_file)): raise ValueError(f"Need a result file for analysis, couldn't find {result_file}") result = pd.read_csv(result_file) result.sort_values('neuron', inplace=True) (model, dataset) = data.s...
class OpenOutputDirOperator(Operator): bl_idname = 'scene.zpy_open_output_dir' bl_label = 'Open Output Dir' bl_description = 'Open file browser at output dir.' bl_category = 'ZPY' bl_options = {'REGISTER'} def execute(self, context): zpy.files.open_folder_in_explorer(context.scene.zpy_ou...
def make_rl_data_module(tokenizer: transformers.PreTrainedTokenizer, data_args, training_args): prompt_dict = utils.jload(data_args.prompt_dict_path) alpaca_instructions = datasets.load_dataset(data_args.dataset_path, data_args.dataset_name) train_df = pd.concat([pd.DataFrame(alpaca_instructions[split]) for...
def convbnrelu_bloc(input_dim, output_dim): return nn.Sequential(nn.Conv2d(in_channels=input_dim, out_channels=output_dim, kernel_size=3, stride=1, padding=0, bias=False), nn.BatchNorm2d(output_dim), nn.ReLU(inplace=True))
class CacheNow(Cache): def fetch_func(self): def _to_json_doc(data, current_case_count_risklayer): log.info('%s: serialize data to JSON', self) t_consulted_ger_tz_iso8601 = datetime.fromtimestamp(int(data['t_obtained_from_source']), tz=pytz.timezone('Europe/Amsterdam')).isoformat() ...
def nnp_freq(importtext): text = word_tokenize(importtext) tokens = nltk.pos_tag(text) c = Counter((token for (word, token) in tokens)) return (c['NNP'] / len(text))
def make_bert_ner_model_fn(optimizer): import tensorflow as tf from bigdl.orca.tfpark import ZooOptimizer def _bert_ner_model_fn(features, labels, mode, params): output_layer = bert_model(features, labels, mode, params).get_sequence_output() if (mode == tf.estimator.ModeKeys.TRAIN): ...
def fetch_test_set(test_set_url): import wget fname = wget.download(test_set_url, 'opus_test.txt') lns = Path(fname).open().readlines() src = lmap(str.strip, lns[::4]) gold = lmap(str.strip, lns[1::4]) mar_model = lmap(str.strip, lns[2::4]) if (not (len(gold) == len(mar_model) == len(src))):...
class AdjustLayer(nn.Module): def __init__(self, in_channels, out_channels): super(AdjustLayer, self).__init__() self.downsample = nn.Sequential(nn.Conv2d(in_channels, out_channels, kernel_size=1, bias=False), nn.BatchNorm2d(out_channels)) def forward(self, x): x = self.downsample(x) ...
def ignore_background_loss(y_true, y_pred): dont_cares = K.minimum(1.0, y_true) return (K.sum((K.abs((y_pred - y_true)) * dont_cares)) / K.sum(dont_cares))
def main(args): if (args.seed is None): colossalai.launch_from_torch(config={}) else: colossalai.launch_from_torch(config={}, seed=args.seed) local_rank = gpc.get_local_rank(ParallelMode.DATA) world_size = gpc.get_world_size(ParallelMode.DATA) if args.with_prior_preservation: ...
class PSPnet(nn.Module): def __init__(self, out_channels=256): super(PSPnet, self).__init__() self.layer6_0 = nn.Sequential(nn.Conv2d(out_channels, out_channels, kernel_size=1, stride=1, padding=0, bias=True), nn.ReLU(), nn.Dropout2d(p=0.5)) self.layer6_1 = nn.Sequential(nn.Conv2d(out_channe...
def plot_causal_matrix_in_training(time_coef, name, log, log_step, threshold=0.5, plot_each_time=False): if (time_coef is None): return if ((np.max(time_coef) - np.min(time_coef)) > 0.01): time_coef = ((time_coef - np.min(time_coef)) / (np.max(time_coef) - np.min(time_coef))) (n, m, t) = tim...
class Vgg19(torch.nn.Module): def __init__(self, model_path: str=None, requires_grad: bool=False): super(Vgg19, self).__init__() if (model_path is None): vgg_pretrained_features = models.vgg19(pretrained=True).features else: model = vgg19(pretrained=False) ...
class JobLauncher(object): JOB_CONFIG = {'local': LocalJob} def __init__(self, yaml_file): self.yaml_file = yaml_file job_key = 'local' if yaml_file.endswith('.yaml'): config = recursive_config(yaml_file) if (config.task_type is not None): job_key ...
def JSD(P, Q): _P = (P / np.linalg.norm(P, ord=1)) _Q = (Q / np.linalg.norm(Q, ord=1)) _M = (0.5 * (_P + _Q)) return (0.5 * (entropy(_P, _M) + entropy(_Q, _M)))
class TestSetAllParamValues(): def test_set_all_param_values(self): from lasagne.layers import InputLayer, DenseLayer, set_all_param_values from lasagne.utils import floatX l1 = InputLayer((10, 20)) l2 = DenseLayer(l1, 30) l3 = DenseLayer(l2, 40) a2 = floatX(numpy.ran...
def test_openimages_dataset(): tmp_dir = tempfile.TemporaryDirectory() label_file = osp.join(tmp_dir.name, 'label_file.csv') ann_file = osp.join(tmp_dir.name, 'ann_file.csv') label_level_file = osp.join(tmp_dir.name, 'label_level_file.csv') _create_oid_style_ann(label_file, ann_file, label_level_fil...
class MyEncoder(json.JSONEncoder): def default(self, obj): if isinstance(obj, np.integer): return int(obj) elif isinstance(obj, np.uint8): return int(obj) elif isinstance(obj, np.floating): return float(obj) elif isinstance(obj, np.ndarray): ...
def get_callbacks(args): monitor_mode = ('min' if ('loss' in args.logger.monitor) else 'max') checkpoint_naming = '{epoch}-{step}-{valid_loss:.4f}' if (args.logger.monitor != 'valid_loss'): checkpoint_naming += (('-{' + args.logger.monitor) + ':.4f}') checkpoint_callback = ModelCheckpoint(filena...
class GAT(nn.Module): def __init__(self, num_layers, in_dim, num_hidden, num_classes, heads, activation, feat_drop=0, attn_drop=0, negative_slope=0.2, residual=False): super(GAT, self).__init__() self.num_layers = num_layers self.gat_layers = nn.ModuleList() self.activation = activat...
def tst_keras(): from tensorflow import __version__ from tensorflow.compat.v1 import reset_default_graph from classification_models_3D.tfkeras import Classifiers print('Tensorflow version: {}'.format(__version__)) if 1: type = 'densenet121' print('Go for {}'.format(type)) (mo...
def log_board_file(fpath, args, metrics: dict): rt_list = [] if args.dbg: return time = datetime.datetime.now() rt_list.append('Time: {}'.format(time)) rt_list.append('Data Name') rt_list.append(args.data_name) rt_list.append('Compression') rt_list.append(args.compression) rt...
def gen_required_sigs(project_name: str, class_name: str, methods_list: list): full_text = '' class_row = db.select(table_name='class', conditions={'project_name': project_name, 'class_name': class_name}, result_cols=['signature', 'fields', 'has_constructor']) if (not class_row): raise RuntimeError(...
_config(framework_name=FRAMEWORK_NAME, algo_name=STATIC_QUANT) class StaticQuantConfig(BaseConfig): supported_configs: List[OperatorConfig] = [] params_list = ['weight_dtype', 'weight_sym', 'weight_granularity', 'act_dtype', 'act_sym', 'act_granularity'] name = STATIC_QUANT def __init__(self, weight_dty...
def make_res_layer(block, inplanes, planes, blocks, stride=1, dilation=1, style='pytorch', with_cp=False, conv_cfg=None, norm_cfg=dict(type='BN'), dcn=None, gcb=None, sac=None, rfp=None, gen_attention=None, gen_attention_blocks=[]): downsample = None if ((stride != 1) or (inplanes != (planes * block.expansion))...
def main(): args = parse_args() send_example_telemetry('run_swag_no_trainer', args) accelerator_log_kwargs = {} if args.with_tracking: accelerator_log_kwargs['log_with'] = args.report_to accelerator_log_kwargs['logging_dir'] = args.output_dir accelerator = Accelerator(gradient_accumu...
def load_parameters(): FIXED_PARAMETERS = {'model_type': args.model_type, 'model_name': args.model_name, 'training_mnli': '{}/multinli_0.9/multinli_0.9_train.jsonl'.format(args.datapath), 'dev_matched': '{}/multinli_0.9/multinli_0.9_dev_matched.jsonl'.format(args.datapath), 'dev_mismatched': '{}/multinli_0.9/multin...
def test_same_as_metrics_mse_implementation(): actual = (np.random.random(size=(5, 5, 8)) * 255) assert (np.min(actual) >= 0) assert (np.max(actual) <= 255) expected = (np.random.random(size=(5, 5, 8)) * 255) assert (np.min(expected) >= 0) assert (np.max(expected) <= 255) mask = np.random.ra...
class RoIAwarePool3d(nn.Module): def __init__(self, out_size, max_pts_each_voxel=128): super().__init__() self.out_size = out_size self.max_pts_each_voxel = max_pts_each_voxel def forward(self, rois, pts, pts_feature, pool_method='max'): assert (pool_method in ['max', 'avg']) ...
class RandomHorizontallyFlip(object): def __call__(self, img, mask): if (random.random() < 0.5): return (img.transpose(Image.FLIP_LEFT_RIGHT), mask.transpose(Image.FLIP_LEFT_RIGHT)) return (img, mask)
class W2lDecoder(object): def __init__(self, args, tgt_dict): self.tgt_dict = tgt_dict self.vocab_size = len(tgt_dict) self.nbest = args.nbest self.criterion_type = CriterionType.CTC self.blank = (tgt_dict.index('<ctc_blank>') if ('<ctc_blank>' in tgt_dict.indices) else tgt_d...
def prepare_corpus_vocabs(args): (language, data_set, data_type) = args print(f'Building vocabulary for {language} {data_type}') if utils.check_vocab(language, data_type): return docs = utils.load_doc(language, data_set) tokens = utils.flatten((doc[data_type] for doc in docs)) tokens = u...
def compute_pixel_coverage(instance_seg, object_id): cand_mask = (instance_seg == object_id) score = (cand_mask.sum().astype(np.float64) / cand_mask.size) return score
def demo_to_midi(data, names, bpm=90.0, shift_second=None, shift_beat=None): alpha = bpm_to_alpha(bpm) if (shift_second is None): shift_second = (alpha * shift_beat) midi = pretty_midi.PrettyMIDI(initial_tempo=bpm) for (track, name) in zip(data, names): ins = pretty_midi.Instrument(0, na...
def logging_csv(file, header): i = 1 fname = file while os.path.isfile(fname): fname = (file + str(i)) i += 1 with open(fname, 'w', newline='') as f: writer = csv.writer(f) writer.writerow(header) def write_csv(s): with open(fname, 'a', newline='') as f: ...
def convert_PubLayNet_blob_to_target_blob(PubLayNet_blob, lookup_table): PubLayNet_shape = PubLayNet_blob.shape leading_factor = int((PubLayNet_shape[0] / NUM_PUBLAYNET_CLS)) tail_shape = list(PubLayNet_shape[1:]) assert ((leading_factor == 1) or (leading_factor == 4)) PubLayNet_blob = PubLayNet_blo...
def image_transform(image_size: Union[(int, List[int])], augmentation: dict, mean: List[float]=[0.485, 0.456, 0.406], std: List[float]=[0.229, 0.224, 0.225]) -> Callable: if isinstance(image_size, int): image_size = (image_size, image_size) else: image_size = tuple(image_size) horizontal_fli...
def get_spatial_graph(num_node, self_link, inward, outward): I = edge2mat(self_link, num_node) In = normalize_digraph(edge2mat(inward, num_node)) Out = normalize_digraph(edge2mat(outward, num_node)) A = np.stack((I, In, Out)) return A
def get_vgg2l_odim(idim, in_channel=3, out_channel=128): idim = (idim / in_channel) idim = np.ceil((np.array(idim, dtype=np.float32) / 2)) idim = np.ceil((np.array(idim, dtype=np.float32) / 2)) return (int(idim) * out_channel)
def get_default_cfg(): _C = CN() _C.VERSION = 2 _C.DATA_DIR = './data/waymo/processed/validation/' _C.DATASET = 'waymo' _C.OUTPUT_DIR = './output/debug' _C.OBJECT_LIST_PATH = './data/waymo/splits/easy_list.json' _C.CKPT_PATH = '/root/code/shape-reconstruction/experiments/point_sdf/partial_po...
class TestLanguageModeling(unittest.TestCase): def setUp(self): logging.disable(logging.CRITICAL) def tearDown(self): logging.disable(logging.NOTSET) def test_fconv_lm(self): with contextlib.redirect_stdout(StringIO()): with tempfile.TemporaryDirectory('test_fconv_lm') as...
class AutoEncoder(nn.Module): def __init__(self, d, encoded_size): super(AutoEncoder, self).__init__() self.encoded_size = encoded_size self.data_size = len(d.encoded_feature_names) self.encoded_categorical_feature_indexes = d.get_data_params()[2] self.encoded_continuous_feat...
def get_detector(name, **kwargs): if ('convs' == name): return Conv3x3ReLUBNs(kwargs['in_channels'], kwargs['inner_channels'], kwargs['out_channels'], kwargs['scale'], kwargs['num_convs'], kwargs.get('drop_rate', 0.0)) raise ValueError(f'{name} is not supported.')
def init_logger(log_folder, file_name='output.log'): if os.path.exists(log_folder): print(('WARNING: The results directory (%s) already exists. Delete previous results directory [y/N]? ' % log_folder), end='') var = input() if ((var is 'y') or (var is 'Y')): print('removing direc...
class BaseImageDataset(BaseDataset): def print_dataset_statistics(self, train, query, gallery): (num_train_pids, num_train_imgs, num_train_cams, num_train_views) = self.get_imagedata_info(train) (num_query_pids, num_query_imgs, num_query_cams, num_train_views) = self.get_imagedata_info(query) ...
_config def model_resnet_cifar(): cfg = {'learner': {'model': 'ResnetiCifar44'}, 'training': {'resume_from_checkpoint_path': '/mnt/models/resnet44-nolinear-cifar.pth', 'resume_training': True}}
class FCBlock(nn.Module): def __init__(self, input_dim, hidden_dims, output_dim=10): super(FCBlock, self).__init__() self.fc1 = nn.Linear(input_dim, hidden_dims[0]) self.fc2 = nn.Linear(hidden_dims[0], hidden_dims[1]) self.fc3 = nn.Linear(hidden_dims[1], output_dim) def forward(s...
def build_backbone(args): position_embedding = build_position_encoding(args) train_backbone = (args.lr_backbone > 0) return_interm_layers = (args.num_feature_levels > 1) backbone = Backbone(args.backbone, train_backbone, return_interm_layers, args) model = Joiner(backbone, position_embedding) re...
def gen_filename(filename, dataset='esc50'): if (dataset == 'fma'): dataset = 'fma_mp3' ext = filename.split('.')[(- 1)] filename = (((('/data/sls/scratch/yuangong/audiollm/src/data/prep_data_ltue/whisper_feat/' + str(dataset)) + '/whisper_large-v1/') + filename.split('/')[(- 1)][:((- len(ext)) - 1)...
class Binarizer(): def binarize(filename, dict, consumer, tokenize=tokenize_line, append_eos=True, reverse_order=False, offset=0, end=(- 1), already_numberized=False): (nseq, ntok) = (0, 0) replaced = Counter() def replaced_consumer(word, idx): if ((idx == dict.unk_index) and (wo...
class ImageDecoder(nn.Module): def __init__(self, input_size, n_channels, ngf, n_layers, activation='tanh'): super(ImageDecoder, self).__init__() ngf = (ngf * (2 ** (n_layers - 2))) layers = [nn.ConvTranspose2d(input_size, ngf, 4, 1, 0, bias=False), nn.BatchNorm2d(ngf), nn.ReLU(True)] ...
_torch _torchaudio _sentencepiece class Speech2TextProcessorTest(unittest.TestCase): def setUp(self): self.tmpdirname = tempfile.mkdtemp() vocab = ['<s>', '<pad>', '</s>', '<unk>', 'This', 'is', 'a', 't', 'est'] vocab_tokens = dict(zip(vocab, range(len(vocab)))) save_dir = Path(self....
def _validate_accelerator(accel_obj): if (not (((a1 is not None) and isinstance(accel_obj, a1)) or ((a2 is not None) and isinstance(accel_obj, a2)))): raise AssertionError(f'{accel_obj.__class__.__name__} accelerator is not subclass of BaseAccelerator')
class GroupCenterCrop(object): def __init__(self, size): self.worker = torchvision.transforms.CenterCrop(size) def __call__(self, img_group): return [self.worker(img) for img in img_group]
def get_dataloader(split, config, return_dict=False): dataset = AudioCaptionDataset(config.dataset, split, 'captioning', return_dict) if (split == 'train'): shuffle = True drop_last = True else: shuffle = False drop_last = False return DataLoader(dataset=dataset, batch_si...
def test_seg_evaluate(): if (not torch.cuda.is_available()): pytest.skip() root_path = './tests/data/s3dis' ann_file = './tests/data/s3dis/s3dis_infos.pkl' s3dis_dataset = S3DISSegDataset(data_root=root_path, ann_files=ann_file, test_mode=True) results = [] pred_sem_mask = dict(semantic_...
def mobilenetv3_large_100(pretrained=False, **kwargs): model = _gen_mobilenet_v3('mobilenetv3_large_100', 1.0, pretrained=pretrained, **kwargs) return model
class Kernel(Module): def __init__(self, scale=1.0, p=2.0, basis='Epanechnikov', fix_params=True): super().__init__() self.init_params(scale, fix_params) self.pairwise_distance = partial(torch.cdist, p=p) self.basis_func = torch.jit.script(getattr(diffsnn.nonparametric.basis, basis)(...
def make_student(run_seed: int, config) -> BaseStudent: trajs_path = config['TRAIN_TRAJ_PATH'] model_path = get_model_path(config['ENV'], ('student_' + config['ALG']), run_seed=run_seed) state_dim = config['STATE_DIM'] action_dim = config['ACTION_DIM'] num_training_envs = config['NUM_TRAINING_ENVS']...
def pad_seq(seq, max_length, PAD_token=0): seq += [PAD_token for i in range((max_length - len(seq)))] return seq
class TFXLMRobertaModel(): def __init__(self, *args, **kwargs): requires_tf(self) def from_pretrained(self, *args, **kwargs): requires_tf(self)
def initalizeEnvironment(environment, logger): if (environment != ''): db = Database(DB_NAME, DB_HOST, DB_PORT) ' Can be SimpleFog, BitbrainFog, AzureFog // Datacenter ' if (environment != ''): datacenter = Datacenter(HOSTS_IP, environment, 'Virtual') else: datacenter = AzureFog(...
class Probe(nn.Module): def __init__(self, dim, n_probes): super(Probe, self).__init__() self.self_attn = nn.Linear(dim, n_probes, bias=False) nn.init.xavier_uniform_(self.self_attn.weight) def forward(self, birnn_outputs, masks): attn = self.self_attn(birnn_outputs).transpose(1,...
def gen_filename(filename): ext = filename.split('.')[(- 1)] filename = filename.split('/')[(- 1)][:((- len(ext)) - 1)] return filename
def TrainPrepare(): if 1: WB97XDAtom = {} WB97XDAtom[1] = (- 0.) WB97XDAtom[6] = (- 37.) WB97XDAtom[7] = (- 54.) WB97XDAtom[8] = (- 75.) a = MSet('nicotine_aimd_rand') a.Load() b = MSet('nicotine_aimd_rand_train') for (mol_index, mol) in enumer...
class Model(nn.Module): def __init__(self): super().__init__() self.param = nn.Parameter(torch.tensor([1.0])) def forward(self, x, **kwargs): return (self.param * x) def train_step(self, data_batch, optimizer, **kwargs): return {'loss': torch.sum(self(data_batch['x']))} d...
class NystromformerForSequenceClassification(metaclass=DummyObject): _backends = ['torch'] def __init__(self, *args, **kwargs): requires_backends(self, ['torch'])
.parametrize('loader_parameters', [{'path_data': [str(Path(__data_testing_dir__, 'microscopy_png'))], 'target_suffix': ['_seg-myelin-manual', '_seg-axon-manual'], 'extensions': ['.png'], 'roi_params': {'suffix': None, 'slice_filter_roi': None}, 'contrast_params': {'contrast_lst': [], 'balance': {}}, 'slice_axis': 'axia...
def draw_success_precision(success_ret, name, videos, attr, precision_ret=None, norm_precision_ret=None, bold_name=None, axis=[0, 1]): (fig, ax) = plt.subplots() ax.grid(b=True) ax.set_aspect(1) plt.xlabel('Overlap threshold') plt.ylabel('Success rate') if (attr == 'ALL'): plt.title(('\\...
def framework_operator_impl(framework_realizable_ops: List[Type[AbsOpBase]], all_framework_ops: List[Type[AbsOpBase]], op_type: AbsOpBase, *args, **kwargs): SanityCheck.true(issubclass(op_type, AbsOpBase), f'Decorator operator_impl takes AbsOpBase subclass, but got {op_type}') if (op_type is not Constant): ...
def _check_h3d_bbox_head(bbox_cfg, bbox_head): assert (bbox_cfg['type'] == bbox_head.__class__.__name__) assert ((bbox_cfg.num_proposal * 6) == bbox_head.surface_center_matcher.num_point[0]) assert ((bbox_cfg.num_proposal * 12) == bbox_head.line_center_matcher.num_point[0]) assert ((bbox_cfg.suface_matc...
class Cursor(Structure): _fields_ = [('_kind_id', c_int), ('xdata', c_int), ('data', (c_void_p * 3))] def from_location(tu, location): cursor = conf.lib.clang_getCursor(tu, location) cursor._tu = tu return cursor def __eq__(self, other): return conf.lib.clang_equalCursors(sel...
class Alphabet(object): def __init__(self, name, defualt_value=False, keep_growing=True, singleton=False): self.__name = name self.instance2index = {} self.instances = [] self.default_value = defualt_value self.offset = (1 if self.default_value else 0) self.keep_growi...
def annotation_to_instances(ann: Annotation, docs: Dict[(str, List[List[int]])], class_interner: Dict[(str, int)]): evidences = defaultdict(set) for ev in ann.all_evidences(): evidences[ev.docid].add(ev) output_documents = dict() evidence_spans = dict() for (d, evs) in evidences.items(): ...