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class GINEConv(nn.Module): def __init__(self, nin, nout, bias=True): super().__init__() self.nn = MLP(nin, nout, 2, False, bias=bias) self.layer = gnn.GINEConv(self.nn, train_eps=True) def reset_parameters(self): self.layer.reset_parameters() def forward(self, x, edge_index, ...
def extract_feature(inception_model, images): features = inception_model(images, output_logits=False) features = features.detach().cpu().numpy() assert ((features.ndim == 2) and (features.shape[1] == 2048)) return features
def generate_codes_list(hwdb1x_codes_list: list, hwdb2x_train_codes_list: list, hwdb2x_test_codes_list: list): codes_list = hwdb1x_codes_list for code in hwdb2x_train_codes_list: if (code not in codes_list): codes_list.append(code) for code in hwdb2x_test_codes_list: if (code not...
def show_sample(sample): print(('==' * 20)) print('idx:', sample['idx']) for key in ['type', 'level']: if (key in sample): print('{}: {}'.format(key, sample[key])) print('question:', sample['question']) if ('code' in sample): for code in sample['code']: print(...
def add_parser_arguments(parser): parser.add_argument('--last-epoch', type=int, default=(- 1), metavar='', help='lr scheduler - the index of last epoch required by [all]') parser.add_argument('--step-size', type=int, default=(- 1), metavar='', help='lr scheduler - period (epoch) of learning rate decay required ...
class DataParallelCriterion(DataParallel): def forward(self, inputs, *targets, **kwargs): if (not self.device_ids): return self.module(inputs, *targets, **kwargs) (targets, kwargs) = self.scatter(targets, kwargs, self.device_ids) if (len(self.device_ids) == 1): return...
class ResNet(nn.Module): def __init__(self, block, num_blocks, cfg, num_classes=10): super(ResNet, self).__init__() n = 2 self.in_planes = 64 self.cfg = cfg self.conv1 = nn.Conv2d(3, 64, kernel_size=3, stride=1, padding=1, bias=False) self.bn1 = nn.BatchNorm2d(64) ...
def log_box_proposal_results(results): for dataset in results.keys(): keys = results[dataset]['box_proposal'].keys() pad = max([len(k) for k in keys]) logger.info(dataset) for (k, v) in results[dataset]['box_proposal'].items(): logger.info('{}: {:.3f}'.format(k.ljust(pad)...
def torch_gc(): if torch.cuda.is_available(): torch.cuda.empty_cache() torch.cuda.ipc_collect() elif torch.backends.mps.is_available(): try: from torch.mps import empty_cache empty_cache() except Exception as e: print(e) print(' mac...
class SynthPairTnf_pck(object): def __init__(self, use_cuda=True, geometric_model='affine', crop_factor=(9 / 16), output_size=(240, 240), padding_factor=0.5): assert isinstance(use_cuda, bool) assert isinstance(crop_factor, float) assert isinstance(output_size, tuple) assert isinstan...
class Caltech256(data.Dataset): base_folder = '256_ObjectCategories' url = ' filename = '256_ObjectCategories.tar' tgz_md5 = '67b4f42ca05d46448c6bb8ecd2220f6d' def __init__(self, root, train=True, transform=None, target_transform=None, download=False): self.root = os.path.expanduser(root) ...
def base_kernels(dimensions=1, base_kernel_names='SE'): for kernel in base_kernels_without_dimension(base_kernel_names): if kernel.is_thunk: (yield kernel) else: for dimension in range(dimensions): k = kernel.copy() k.dimension = dimension ...
class ResNet_LandScape(nn.Module): def __init__(self, block, layers, num_classes=1000, zero_init_residual=False, groups=1, width_per_group=64, replace_stride_with_dilation=None, norm_layer=None): super(ResNet_LandScape, self).__init__() if (norm_layer is None): norm_layer = nn.BatchNorm2...
def create_target_connection(target: ConfigTarget): if (target.os == 'linux'): conn = get_ssh_connection(target) conn.connect() else: conn = get_smb_connection(target) conn.connect() return conn
_BOX_FEATURE_EXTRACTORS.register('FPN2MLPFeatureExtractor') class FPN2MLPFeatureExtractor(nn.Module): def __init__(self, cfg, in_channels): super(FPN2MLPFeatureExtractor, self).__init__() resolution = cfg.MODEL.ROI_BOX_HEAD.POOLER_RESOLUTION scales = cfg.MODEL.ROI_BOX_HEAD.POOLER_SCALES ...
def GetModelParser(): parser = argparse.ArgumentParser(add_help=False) parser.add_argument('-L', '--lr', '--learning_rate', help='Learning rate to be used in algorithm.', type=float, default=0.001) parser.add_argument('--model_directory', help='models directory', default='~/.costar/models') parser.add_a...
class NuSVR(SvmModel, RegressorMixin): _impl = 'nu_svr' def __init__(self, kernel='rbf', degree=3, gamma='auto', coef0=0.0, nu=0.5, C=1.0, tol=0.001, probability=False, shrinking=False, cache_size=None, verbose=False, max_iter=(- 1), n_jobs=(- 1), max_mem_size=(- 1), gpu_id=0): super(NuSVR, self).__init...
class BasicTextNormalizer(): def __init__(self, remove_diacritics: bool=False, split_letters: bool=False): self.clean = (remove_symbols_and_diacritics if remove_diacritics else remove_symbols) self.split_letters = split_letters def __call__(self, s: str): s = s.lower() s = re.sub...
class CategoricalParams(DistributionParams[Categorical]): def __init__(self, n_categories, batch_shape: Size=torch.Size()): super().__init__(batch_shape=torch.Size(batch_shape)) self.logits = nn.Parameter(torch.randn(*batch_shape, n_categories)) def get_distribution(self) -> Categorical: ...
class CallerMutation(ExternalCallHandler): def handle(self) -> None: self.mutate_caller(should_propagate=True)
class FlaxDiffusionPipeline(metaclass=DummyObject): _backends = ['flax'] def __init__(self, *args, **kwargs): requires_backends(self, ['flax']) def from_config(cls, *args, **kwargs): requires_backends(cls, ['flax']) def from_pretrained(cls, *args, **kwargs): requires_backends(cls...
def gumbel_softmax(logits, tau=1, hard=False, eps=1e-10): y_soft = gumbel_softmax_sample(logits, tau=tau, eps=eps) if hard: shape = logits.size() (_, k) = y_soft.data.max((- 1)) y_hard = torch.zeros(*shape) if y_soft.is_cuda: y_hard = y_hard.cuda() y_hard = y_...
def linkcode_resolve(domain, info): if (domain != 'py'): return None if (not info['module']): return None filename = info['module'].replace('.', '/') res = '{}/{}.py'.format(repo_url, filename) return res
def save(subdir, b, p, dp, faces, gt_mesh, image, duration=5, fps=50): from scipy.misc import imsave from util3d.mesh.obj_io import write_obj imsave(os.path.join(subdir, 'image.png'), image) (v, f) = (np.array(gt_mesh[k]) for k in ('vertices', 'faces')) write_obj(os.path.join(subdir, 'gt_mesh.obj'),...
class Model(nn.Module): def __init__(self, vsize, ncls): super().__init__() self.emb = nn.Embedding(vsize, 100) self.rnn = nn.LSTM(100, 100, 1) self.proj = nn.Linear(100, ncls) def forward(self, input_): emb_out = self.emb(input_) (_, (h, c)) = self.rnn(emb_out) ...
def _name_cleaner(agent_name): rename_dict = {'correct_ts': 'Correct TS', 'kl_ucb': 'KL UCB', 'misspecified_ts': 'Misspecified TS', 'ucb1': 'UCB1', 'ucb-best': 'UCB-best', 'nonstationary_ts': 'Nonstationary TS', 'stationary_ts': 'Stationary TS', 'greedy': 'greedy', 'ts': 'TS', 'action_0': 'Action 0', 'action_1': 'A...
(a='double', spline='Spline', returns='double') def H(a=(- 1)): if (not enable_Hubble): return 0 if (a == (- 1)): a = universals.a spline = temporal_splines.a_H if (spline is None): abort('The function H(a) has not been tabulated. Have you called init_time?') return (a(a) * s...
def build_fake_yaml(): fake_yaml = "\n model:\n name: imagenet_prune\n framework: pytorch\n\n pruning:\n approach:\n weight_compression:\n initial_sparsity: 0.0\n target_sparsity: 0.97\n start_epoch: 0\n end_epoch: 3\n pruners:\n - ...
def _is_valid_explainer(proposed_explainer, expected_explainer_type): try: explainer_type = proposed_explainer.explainer_type available_explanations = proposed_explainer.available_explanations if (explainer_type != expected_explainer_type): _log.warning('Proposed explainer is not...
class MBartTokenizer(metaclass=DummyObject): _backends = ['sentencepiece'] def __init__(self, *args, **kwargs): requires_backends(self, ['sentencepiece'])
def weights_init_xavier(m): classname = m.__class__.__name__ if (classname.find('Conv2d') != (- 1)): init.xavier_normal(m.weight.data)
def preload_training_data(cur_fraction, start_pos, end_pos): input_spec = load_col_data(df_train, list(range(num_samples)), start_pos, end_pos, 'input_spec_path') np.save(os.path.join(dataset_path, 'PreLoad Training Dataset', ('fraction_' + str(cur_fraction)), 'input_spec'), input_spec) output_spec = load_c...
class Step9_GenerateCleanDataset(): def __init__(self, savePath: str, infoFile: str, audioPersistenz: AudioPersistenz, transcriptsPersistenz: TranscriptsPersistenz, audioSamplingRateTransformer: AudioSamplingRateTransformer, transcriptsSelectionTransformer: TranscriptsSelectionTransformer, filter): self.aud...
def val_data(): (datasets, info) = tfds.load(name='beans', with_info=True, as_supervised=True, split=['train']) valdataset = [scale(v, l) for (v, l) in datasets[(- 1)]] return valdataset
def parse_with_config(parser, cmds=None): if (cmds is None): args = parser.parse_args() else: args = parser.parse_args(cmds) if (args.config is not None): config_args = json.load(open(args.config)) override_keys = {arg[2:].split('=')[0] for arg in sys.argv[1:] if arg.startswi...
def get_f1(file, task, iters): f = open(file) for line in f: line = line.strip().replace(',', '').split() if (int(line[1]) == iters): if (line[3] == task): acc = float(line[9]) break f.close() return acc
def _box_cxcywh_to_xyxy(boxes: Tensor) -> Tensor: (cx, cy, w, h) = boxes.unbind((- 1)) x1 = (cx - (0.5 * w)) y1 = (cy - (0.5 * h)) x2 = (cx + (0.5 * w)) y2 = (cy + (0.5 * h)) boxes = torch.stack((x1, y1, x2, y2), dim=(- 1)) return boxes
def main(): parser = ArgumentParser(description="This script computes the ASR-BLEU metric between model's generated audio and the text reference sequences.") parser.add_argument('--lang', help='The target language used to initialize ASR model, see asr_model_cfgs.json for available languages', type=str) pars...
def main(cmdargs): parser = argparse.ArgumentParser(formatter_class=argparse.ArgumentDefaultsHelpFormatter, description='Compute the distortion matrix of the auto and cross-correlation of delta fields') parser.add_argument('--out', type=str, default=None, required=True, help='Output file name') parser.add_a...
def main(dataset=None): if (not dataset): dataset = DatasetBuilder.build_kitti_dataset(DatasetBuilder.KITTI_TRAIN) label_cluster_utils = dataset.kitti_utils.label_cluster_utils print('Generating clusters in {}/{}'.format(label_cluster_utils.data_dir, dataset.data_split)) (clusters, std_devs) = d...
_checkable class JuEstimatorLike(EstimatorLikeFit1, Protocol): def get_needed_types(self) -> ColumnTypes: return ColumnTypes('placeholder') def get_apply_to(self) -> ColumnTypes: return ColumnTypes('placeholder')
def rename_and_save_block(current_block, save_path): current_block = rename_keys(current_block) new_current_block = {} for (k, v) in current_block.items(): new_current_block[k.replace('/', '.')] = v current_block = new_current_block torch.save(current_block, save_path)
def register_agent(id=None, **kwargs): if (id is None): id = get_dynamic_name() print(('Registering agent %s' % id)) def wrap(agent): _agent_registry[id] = dict(agent=agent, **kwargs) return agent return wrap
def test_synthesized_onnx_model(tmp_path): d = (tmp_path / 'test_trt_onnx') d.mkdir() ONNXModel = Model.init('onnx') factory = BackendFactory.init('tensorrt', target='cuda', optmax=True) gen = model_gen(opset=auto_opset(ONNXModel, factory), seed=23132, max_nodes=1) model = ONNXModel.from_gir(gen...
def train(): depth = 6 filters = 25 block_filters = ([filters] * depth) model = tcn.build_model(sequence_length=(28 * 28), channels=1, num_classes=10, filters=block_filters, kernel_size=8) model.compile(optimizer='Adam', metrics=[metrics.SparseCategoricalAccuracy()], loss=losses.SparseCategoricalCro...
def load_csv(data_dir): sep = ('\t' if data_dir.endswith('.tsv') else ',') import pandas as pd try: df = pd.read_csv(data_dir, sep=sep, header=0, encoding='utf-8') except: try: sep = '\t' df = pd.read_csv(data_dir, sep=sep, header=0, encoding='utf-8') exce...
class CelebAHQDatasetParams(util.Params): def get_allowed_params_with_defaults(self): return dict(values_range=((- 1.0), 1.0), img_side=128, data_dir=None, train_shuffle=True, gcs_bucket=None, tfrecord_dir=constants.NVIDIA_CELEBA_HQ_DATASET_PATH, random_flip=False, crop_at_center=False, restrict_to_num_imgs...
class Meters(): def __init__(self): self.meters = {} def get_names(self): return self.meters.keys() def reset(self): for (_, meter) in self.meters.items(): meter.reset() def update(self, name, val): if (name not in self.meters): self.meters[name] =...
class TFFunnelForQuestionAnswering(): def __init__(self, *args, **kwargs): requires_tf(self) def from_pretrained(self, *args, **kwargs): requires_tf(self)
def _check_and_coerce_cfg_value_type(value_a, value_b, key, full_key): type_b = type(value_b) type_a = type(value_a) if (type_a is type_b): return value_a if isinstance(value_b, six.string_types): value_a = str(value_a) elif (isinstance(value_a, tuple) and isinstance(value_b, list)):...
def scale(image, label): w = 224 h = 224 class_num = 3 image = tf.cast(image, tf.float32) image /= 255.0 return (tf.image.resize(image, [w, h]), tf.one_hot(label, class_num))
class FrontendCheckerResult(NamedTuple): waiting_cells: Set[IdType] ready_cells: Set[IdType] new_ready_cells: Set[IdType] forced_reactive_cells: Set[IdType] forced_cascading_reactive_cells: Set[IdType] typecheck_error_cells: Set[IdType] unsafe_order_cells: Dict[(IdType, Set[Cell])] unsaf...
class AffineTransform3D(ImagePreprocessing3D): def __init__(self, affine_mat, translation=np.zeros(3), clamp_mode='clamp', pad_val=0.0, bigdl_type='float'): affine_mat_tensor = JTensor.from_ndarray(affine_mat) translation_tensor = JTensor.from_ndarray(translation) super(AffineTransform3D, se...
def main_worker(gpu, args): args.gpu = gpu args.rank = gpu print(f'Process Launching at GPU {gpu}') if args.distributed: torch.cuda.set_device(args.gpu) dist.init_process_group(backend='nccl') print(f'Building train loader at GPU {gpu}') train_loader = get_loader(args, split=args...
def string_sublength(args): params = functionParams(args, ('s', 'i', 'len')) s = params.get('s', '') i = (int((params.get('i', 1) or 1)) - 1) len = int((params.get('len', 1) or 1)) return s[i:(i + len)]
def main(): parser = argparse.ArgumentParser() parser.add_argument('-c', '--config', default='settings/pretrain.yaml', type=str, help='Setting files') parser.add_argument('-n', '--exp_name', default='exp_name', type=str, help='name of this experiment.') parser.add_argument('-l', '--lr', default=5e-05, t...
def _post_command(self, cmd: str) -> None: _deprecation("'post(cmd)' is deprecated. Use 'post.command(cmd)'.") return post.command(cmd)
def test_W_from_zZ(): shape = (3, 1, 5) z = torch.tensor(np.random.rand(*shape)) Z = (z + torch.tensor(np.random.rand(*shape))) box_W = SigmoidBoxTensor.W(z, Z) eps = torch.finfo(z.dtype).tiny w1 = inv_sigmoid(z.clamp(eps, (1.0 - eps))) w2 = inv_sigmoid(((Z - z) / (1.0 - z)).clamp(eps, (1.0 ...
def setup_imports(): root_folder = registry.get('pythia_root', no_warning=True) if (root_folder is None): root_folder = os.path.dirname(os.path.abspath(__file__)) root_folder = os.path.join(root_folder, '..') environment_pythia_path = os.environ.get('PYTHIA_PATH') if (environment...
class PrintModelAnalysisHook(TrainingHook): def __init__(self, params, model_dir, run_config): super(PrintModelAnalysisHook, self).__init__(params, model_dir, run_config) self._filename = os.path.join(self.model_dir, 'model_analysis.txt') def default_params(): return {} def begin(sel...
def traverse(node, index): queue = Queue() queue.push(node) result = [] while (not queue.isEmpty()): node = queue.pop() result.append(get_token(node, mode=token_mode)) result.append(index) index += 1 for (child_name, child) in node.children(): queue.pu...
def dsrla_mobilenetv2_k6(): print('Constructing dsrla_mobilenetv2_k6......') model = dsRLA_MobileNetV2(rla_channel=6) return model
.skip() def test_redwood_indoor_office1(): gt_prefix = 'RedwoodIndoorOffice1' (_, gt_download_dir, gt_extract_dir) = get_test_data_dirs(gt_prefix) dataset = o3d.data.RedwoodIndoorOffice1() assert Path(gt_download_dir).is_dir() assert Path(gt_extract_dir).is_dir() pcd = o3d.io.read_point_cloud(da...
class UCF101DataModule(pl.LightningDataModule): def __init__(self, data_root, train_batch_size, test_batch_size, num_workers, scale_lower_bound, jitter_prob, greyscale_prob, solarize_prob, **kwargs): super().__init__() self.data_root = data_root self.train_batch_size = train_batch_size ...
def _get_qiskit_versions(): cmd = [sys.executable, '-m', 'pip', 'freeze'] reqs = subprocess.check_output(cmd) reqs_dict = {} for req in reqs.split(): req_parts = req.decode().split('==') if ((len(req_parts) == 1) and req_parts[0].startswith('git')): if ('qiskit' in req_parts[...
_tf def resnet152_v2_imagenet(tile_px, **kwargs): return TensorflowImagenetLayerExtractor('resnet152_v2', tile_px, **kwargs)
class _GatherShardDimWithReshuffleCheck(torch.autograd.Function): def forward(ctx, input_, shard_dim, group=None, ranks=None): ctx.group = group ctx.ranks = ranks ctx.shard_dim = shard_dim return _gather_shard_dim_with_reshuffle_check(input_, shard_dim, group, ranks) def backward...
def train(args): os.environ['CUDA_VISIBLE_DEVICES'] = args.gpu if (args.dataset == 'Flythings3D'): train_dataset = Flythings3D(npoints=args.npoints, root=args.root, train=True) elif (args.dataset == 'Kitti'): train_dataset = KittiSceneFlowDataset(args.root, args.npoints, True) else: ...
def run(): test_acc_results = [] for task_id in range(1, (20 + 1)): print('-*_*_*_*_*_*_*_*_ Task', task_id) if use_10k: (train_data, test_data, vocab) = load_data('./data/tasks_1-20_v1-2/en-10k', 0, task_id) else: (train_data, test_data, vocab) = load_data('./dat...
def fdmobilenet_wd2(**kwargs): return get_mobilenet(version='fd', width_scale=0.5, model_name='fdmobilenet_wd2', **kwargs)
def set_random_seed(seed): np.random.seed(seed) torch.random.manual_seed(seed) if torch.cuda.is_available(): torch.cuda.manual_seed_all(seed) torch.backends.cudnn.deterministic = True torch.backends.cudnn.benchmark = False
def _convert_output_type_range(img, dst_type): if (dst_type not in (np.uint8, np.float32)): raise TypeError(f'The dst_type should be np.float32 or np.uint8, but got {dst_type}') if (dst_type == np.uint8): img = img.round() else: img /= 255.0 return img.astype(dst_type)
class SendStat(Callback): def __init__(self, command, stats): self.command = command if (not isinstance(stats, list)): stats = [stats] self.stats = stats def _trigger_epoch(self): holder = self.trainer.stat_holder v = {k: holder.get_stat_now(k) for k in self.s...
def parse_args(): parser = argparse.ArgumentParser(description='Gather benchmarked models') parser.add_argument('root', type=str, help='root path of benchmarked models to be gathered') parser.add_argument('out', type=str, help='output path of gathered models to be stored') parser.add_argument('--best', ...
def _parse_main(): import argparse parser = argparse.ArgumentParser() parser.add_argument('data_dir') parser.add_argument('--no-solve1', action='store_true', dest='no_solve1') parser.add_argument('--sexp', action='store_true', dest='sexp') return parser.parse_args()
def set_save_name_log_nvdm(args): args.save_name = os.path.join(args.root_path, args.exp_path, 'Data{}_Dist{}_Model{}_Emb{}_Hid{}_lat{}_lr{}_drop{}_kappa{}_auxw{}_normf{}'.format(args.data_name, str(args.dist), args.model, args.emsize, args.nhid, args.lat_dim, args.lr, args.dropout, args.kappa, args.aux_weight, str...
class ResBlock(PlainNetBasicBlockClass): def __init__(self, block_list, in_channels=None, stride=None, no_create=False, **kwargs): super(ResBlock, self).__init__(**kwargs) self.block_list = block_list self.stride = stride self.no_create = no_create if (not no_create): ...
def _expand_onehot_labels(labels, label_weights, label_channels, ignore_index): bin_labels = labels.new_full((labels.size(0), label_channels), 0) valid_mask = ((labels >= 0) & (labels != ignore_index)) inds = torch.nonzero((valid_mask & (labels < label_channels)), as_tuple=False) if (inds.numel() > 0): ...
class KnetD(nn.Module): def __init__(self, inplanes, planes, dropout=0.0, norm='in', first=False): super(KnetD, self).__init__() self.first = first self.maxpool = nn.MaxPool2d(2, 2) self.dropout = dropout self.relu = nn.ReLU(inplace=True) self.conv1 = nn.Conv3d(inplan...
def binary_search_y1(x_minus, x_plus, y_minus, y_plus): eps = 0.0001 y_lower = y_minus.data.clone() y_upper = y_plus.data.clone() y1 = ((y_lower + y_upper) / 2) for i in range(10): y1 = ((y_lower + y_upper) / 2) g = estimate_gradient_upper(y1, eps, x_minus, x_plus, y_minus, y_plus) ...
def remove_comments(original: str) -> str: lines = original.splitlines() c_lines = [x for x in lines if ((not x.rstrip().startswith('#')) and (not (x.strip() == '')))] code = '\n'.join(c_lines) try: root = ast.parse(code) PassRemoveDocstring().remove_docstring(root) modified = as...
class ContrastLoss(nn.Module): def __init__(self, n_data): super(ContrastLoss, self).__init__() self.n_data = n_data def forward(self, x): bsz = x.shape[0] m = (x.size(1) - 1) Pn = (1 / float(self.n_data)) P_pos = x.select(1, 0) P_pos[(P_pos == 0)] = eps ...
def register_dataset(datasets_root: Optional[os.PathLike]=None): def empty_load_callback(): pass video_list_fpath = maybe_prepend_base_path(datasets_root, 'chimpnsee/cdna.eva.mpg.de/video_list.txt') video_base_path = maybe_prepend_base_path(datasets_root, 'chimpnsee/cdna.eva.mpg.de') DatasetCata...
def test_purge(remove: MagicMock) -> None: glob_result = ['1.cache_record.json', '2.cache_record.json'] glob_mock = MagicMock(return_value=glob_result) mock_cache_record = {'expires': '3000-01-01', 'filename': 'df_cache.parquet'} mock_load_json = MagicMock(return_value=mock_cache_record) with patch(...
class MetricLogger(object): def __init__(self, delimiter='\t'): self.meters = defaultdict(SmoothedValue) self.delimiter = delimiter def update(self, **kwargs): for (k, v) in kwargs.items(): if isinstance(v, torch.Tensor): v = v.item() assert isinst...
def decode_png(input: torch.Tensor, mode: ImageReadMode=ImageReadMode.UNCHANGED) -> torch.Tensor: output = torch.ops.image.decode_png(input, mode.value) return output
def main(args): set_logging(args.log_dir) logger.setLevel(logging.INFO) logger.info(f'Parameters: {args}') logger.info('Reading data...') with open(os.path.join(args.save_loc, f'train.json'), 'r', encoding='utf-8') as f: train_data = json.load(f) with open(os.path.join(args.save_loc, f'v...
def torch_available(): try: import torch import torch.utils.dlpack except ImportError: return False return True
class CosineAnnealingScheduler(Callback): def __init__(self, T_max, eta_max, eta_min=0, verbose=0, epoch_start=80, restart_epochs=None, gamma=1, expansion=1, flat_end=False): super(CosineAnnealingScheduler, self).__init__() self.epoch_start = epoch_start self.expansion = expansion se...
(argument('id', help='id of instance to start/restart', type=int), usage='vast.py start instance <id> [--raw]', help='Start a stopped instance') def start__instance(args): url = apiurl(args, '/instances/{id}/'.format(id=args.id)) r = requests.put(url, json={'state': 'running'}) r.raise_for_status() if (...
def SEResNet18(input_shape=None, input_tensor=None, weights=None, classes=1000, stride_size=2, init_filters=64, include_top=False, repetitions=(2, 2, 2, 2), **kwargs): return ResNet(MODELS_PARAMS['seresnet18'], input_shape=input_shape, input_tensor=input_tensor, include_top=include_top, classes=classes, stride_size...
def parse_args(): parser = argparse.ArgumentParser(description=__doc__) parser.add_argument('--seed', type=int, help='seed', default=1) parser.add_argument('--data-file', type=str, default='_output/data.pkl') parser.add_argument('--out-file', type=str, default='_output/out.csv') parser.add_argument(...
def generate_model(input_shape_tra_cdr3, input_shape_tra_vgene, input_shape_tra_jgene, input_shape_trb_cdr3, input_shape_trb_vgene, input_shape_trb_jgene, num_outputs): kmer_size = 4 features_tra_cdr3 = Input(shape=input_shape_tra_cdr3) features_tra_vgene = Input(shape=input_shape_tra_vgene) features_tr...
def check_box_8c_format(input_data): if isinstance(input_data, np.ndarray): if (input_data.ndim == 3): if (input_data.shape[1:] != (3, 8)): raise TypeError('Given input does not have valid number of attributes. Should be N x 3 x 8 for box_8c.') elif (input_data.ndim == 2)...
class LayoutLMv2FeatureExtractor(LayoutLMv2ImageProcessor): def __init__(self, *args, **kwargs) -> None: warnings.warn('The class LayoutLMv2FeatureExtractor is deprecated and will be removed in version 5 of Transformers. Please use LayoutLMv2ImageProcessor instead.', FutureWarning) super().__init__(...
def open_tsv(fname, folder): print(('Opening %s Data File...' % fname)) df = pd.read_csv(fname, sep='\t', names=['caption', 'url'], usecols=range(1, 2)) df['folder'] = folder print('Processing', len(df), ' Images:') return df
class BasicBlock(nn.Module): def __init__(self, norm, in_channels): super(BasicBlock, self).__init__() self.norm = norm_layer(norm, in_channels) self.dropout = SharedDropout() def forward(self, x, edge_index, dropout_mask=None, edge_emb=None): out = self.norm(x) out = F.r...
_module() class GaussianFocalLoss(nn.Module): def __init__(self, alpha=2.0, gamma=4.0, reduction='mean', loss_weight=1.0): super(GaussianFocalLoss, self).__init__() self.alpha = alpha self.gamma = gamma self.reduction = reduction self.loss_weight = loss_weight def forward...
def test_reference_split_handles_repeated_fields(): ref_line = u'[20] A. Buchel, Finite temperature resolution of the Klebanov-Tseytlin singularity, Nucl. Phys. B 600, 219 (2001) [hep-th/0011146]. A. Buchel, C. P. Herzog, I. R. Klebanov, L. A. Pando Zayas and A. A. Tseytlin, Nonextremal gravity duals for fractional...
class TestEmbeddings(unittest.TestCase): def setUp(self): self.emb_size = 10 self.vocab_size = 11 self.pad_idx = 1 seed = 42 torch.manual_seed(seed) def test_size(self): emb = Embeddings(embedding_dim=self.emb_size, vocab_size=self.vocab_size, padding_idx=self.pad...