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class TestRunnerWrapper(): def __init__(self, runner: DocTestRunner): self._runner = runner def __getattr__(self, name: str) -> Any: return getattr(self._runner, name) def run(self, test: DocTest, *args: Any, **kwargs: Any) -> Any: for ex in test.examples: ex.source = tes...
def create_rss_feed(doctree_dir: Path, output_dir: Path): last_build_date = _format_rfc_2822(dt.datetime.now(dt.timezone.utc)) items = '\n'.join(_generate_items(Path(doctree_dir))) output = f'''<?xml version='1.0' encoding='UTF-8'?> <rss xmlns:atom=" xmlns:content=" version="2.0"> <channel> <title>New...
def test_call_invalid_selector(deploy_client: JSONRPCClient) -> None: (contract_proxy, _) = deploy_rpc_test_contract(deploy_client, 'RpcTest') address = contract_proxy.address assert (len(deploy_client.web3.eth.get_code(address)) > 0) data = decode_hex(get_transaction_data(deploy_client.web3, contract_p...
class ExGaussianRV(RandomVariable): name = 'exgaussian' ndim_supp = 0 ndims_params = [0, 0, 0] dtype = 'floatX' _print_name = ('ExGaussian', '\\operatorname{ExGaussian}') def rng_fn(cls, rng, mu, sigma, nu, size=None) -> np.ndarray: return np.asarray((rng.normal(mu, sigma, size=size) + r...
def get_next_arguments(action, type='input'): req = [] non_req = [] if (type == 'input'): for (k, v) in action.signature.inputs.items(): if (not v.has_default()): req.append([k, v.qiime_type]) else: non_req.append([('.' + k), v.qiime_type]) ...
class BackboneEncoder(Module): def __init__(self, num_layers, mode='ir', n_styles=18, opts=None): super(BackboneEncoder, self).__init__() assert (num_layers in [50, 100, 152]), 'num_layers should be 50,100, or 152' assert (mode in ['ir', 'ir_se']), 'mode should be ir or ir_se' blocks...
class UseFunctionTest(unittest.TestCase): def setUp(self): super().setUp() self.project = testutils.sample_project() self.mod1 = testutils.create_module(self.project, 'mod1') self.mod2 = testutils.create_module(self.project, 'mod2') def tearDown(self): testutils.remove_pr...
class GraphSearchUtils(): def __init__(self, model: tf.Graph, start_op_names: Union[(str, List[str])], output_op_names: Union[(str, List[str])]): if isinstance(start_op_names, str): start_op_names = [start_op_names] if isinstance(output_op_names, str): output_op_names = [outp...
class Task(BaseModel): testcase_name: str task_mode: str = 'normal' custom_strategies: List[List[Any]] = [] parallel_workers: int = multiprocessing.cpu_count() api_addresses: List[str] = [] api_timeout: int = 30000 net_ordering_evaluation_mode: int = 2 droute_end_iter: int = (- 1)
class BasicLayer(nn.Module): def __init__(self, dim, out_dim, input_resolution, depth, num_heads, window_size, mlp_ratio=4.0, qkv_bias=True, qk_scale=None, drop=0.0, attn_drop=0.0, drop_path=0.0, norm_layer=nn.LayerNorm, upsample=None): super().__init__() self.dim = dim self.input_resolution...
.parametrize('proc_name', ['s1', 's2', 's3']) def test_terminate_no_pid(tcp_port, proc_name, xprocess): class Starter(ProcessStarter): pattern = 'started' args = [sys.executable, server_path, tcp_port] xprocess.ensure(proc_name, Starter) info = xprocess.getinfo(proc_name) (pid, info.pid)...
class TransformerLayer(nn.Module): def __init__(self, args): super(TransformerLayer, self).__init__() self.self_attn = MultiHeadedAttention(args.hidden_size, args.heads_num, args.dropout) self.dropout_1 = nn.Dropout(args.dropout) self.layer_norm_1 = LayerNorm(args.hidden_size) ...
def make_loader(split, dst_cls=DatasetAllTasks, repeat=None, is_training=True, unlabeled=False, transforms_tr=None, transforms_val=None): if is_training: dst = dst_cls(split=split, repeat=repeat, unlabeled=unlabeled, transform=transforms_tr, task=args.task, num_cls=config.num_cls, is_2d=True) return...
def test_fixture_order_respects_scope(pytester: Pytester) -> None: pytester.makepyfile("\n import pytest\n\n data = {}\n\n (scope='module')\n def clean_data():\n data.clear()\n\n (autouse=True)\n def add_data():\n data.update(value=True)\n\n .us...
def generate_all_rotation_angles(increment): n = round(((2 * math.pi) / increment)) print(n, 'rotations along each axis') print('generating template rotations...') angles = [] phi = 0.0 theta = 0.0 psi = 0.0 for i in range(n): phi = (i * increment) for j in range(n): ...
class TestCommonAncestor(): def test_has_ancestor(self, tmp_path: Path) -> None: fn1 = (((tmp_path / 'foo') / 'bar') / 'test_1.py') fn1.parent.mkdir(parents=True) fn1.touch() fn2 = (((tmp_path / 'foo') / 'zaz') / 'test_2.py') fn2.parent.mkdir(parents=True) fn2.touch()...
class S3(): def __init__(self, session): self._session = session self._s3 = session.client('s3') def cp(self, target_path, bucket, key): target_basename = os.path.basename(target_path) if os.path.isdir(target_path): tmpdir = tempfile.mkdtemp(prefix='petctl_') ...
class RotatedDecoder(LatticeDecoder): encoder_type = XXZZQubit syndrome_graph_keys = ['X', 'Z'] def _params_validation(self): super()._params_validation() if isinstance(self.params['d'], Number): d = int(self.params['d']) self.params['d'] = (d, d) if (len(self...
class TypeCheckSuite(DataSuite): files = typecheck_files def run_case(self, testcase: DataDrivenTestCase) -> None: if ((lxml is None) and (os.path.basename(testcase.file) == 'check-reports.test')): pytest.skip('Cannot import lxml. Is it installed?') incremental = (('incremental' in t...
def validate_sort_fields(sort_fields): descending = set() def sort_order_filter(name): if name.startswith('-'): name = name[1:] descending.add(name) return name sort_fields = validate_field_list(sort_fields, name_filter=sort_order_filter) log.debug(('Sorting order...
class TestHarness(Component): def construct(s, Type, q, src_msgs, sink_msgs, src_interval, sink_interval): s.src = TestSrcCL(Type, src_msgs, interval_delay=src_interval) s.q = q s.sink = TestSinkCL(Type, sink_msgs, interval_delay=sink_interval) connect(s.src.send, s.q.enq) co...
def create_dataset(input_folder: str, output_folder: str, target_transform): dataset = DSprites(root=input_folder, target_transform=target_transform) mapper = DSpritesMapper(dataset, output_path=output_folder) loader = DataLoader(mapper, num_workers=8, batch_size=1, collate_fn=(lambda x: x[0])) with tqd...
def _add_variable_to_netcdf_file(nc, var_name, var_info): v = nc.createVariable(var_name, var_info['data'].dtype.str[1:], dimensions=var_info['dim_labels'], fill_value=var_info.get('fill_value')) v[:] = var_info['data'] for (attr_key, attr_val) in var_info['attrs'].items(): if isinstance(attr_val, (...
def groups_target(tmp_path): filenames = ['older.c', 'older.h', 'target.o', 'newer.c', 'newer.h'] paths = [(tmp_path / name) for name in filenames] for (mtime, path) in enumerate(paths): path.write_text('', encoding='utf-8') os.utime(path, (mtime, mtime)) return types.SimpleNamespace(old...
class Continuation(Model): project = models.ForeignKey('Project', on_delete=models.CASCADE, related_name='+', verbose_name=_('Project'), help_text=_('The project for this continuation.')) user = models.ForeignKey(settings.AUTH_USER_MODEL, on_delete=models.CASCADE, related_name='+', verbose_name=_('User'), help_...
class Tpattern(TestCase): def test_empty(self): self.assertEqual(util.pattern(''), '') def test_basic(self): self.assertEqual(util.pattern('<title>'), 'Title') def test_basic_nocap(self): self.assertEqual(util.pattern('<title>', False), 'title') def test_internal(self): s...
class KnownValues(unittest.TestCase): def test_orth(self): numpy.random.seed(10) n = 100 a = numpy.random.random((n, n)) s = numpy.dot(a.T, a) c = orth.lowdin(s) self.assertTrue(numpy.allclose(reduce(numpy.dot, (c.T, s, c)), numpy.eye(n))) x1 = numpy.dot(a, c)...
('a paragraph format having {prop_name} set {setting}') def given_a_paragraph_format_having_prop_set(context, prop_name, setting): style_name = {'to inherit': 'Normal', 'On': 'Base', 'Off': 'Citation'}[setting] document = Document(test_docx('sty-known-styles')) context.paragraph_format = document.styles[sty...
def syllabify(language, word): if (type(word) == str): word = word.split() syllables = [] internuclei = [] for phoneme in word: phoneme = phoneme.strip() if (phoneme == ''): continue stress = None if phoneme[(- 1)].isdigit(): stress = int(p...
def test_run_with_fill_defaults_adds_required_field(run_line, tmp_path): schemafile = (tmp_path / 'schema.json') schemafile.write_text(json.dumps(SCHEMA)) doc = (tmp_path / 'instance.json') doc.write_text(json.dumps(MISSING_FIELD_DOC)) result_without_fill_defaults = run_line(['check-jsonschema', '--...
def _update(input: torch.Tensor, target: torch.Tensor, from_logits: bool, weight: Optional[torch.Tensor]=None) -> Tuple[(torch.Tensor, torch.Tensor, torch.Tensor)]: if from_logits: cross_entropy = F.binary_cross_entropy_with_logits(input, target, weight, reduction='none').sum(dim=(- 1)) else: cr...
class HotpotFullIterativeDataset(QuestionAndParagraphsDataset): def __init__(self, questions: List[HotpotQuestion], batcher: ListBatcher, bridge_as_comparison=False): self.questions = questions self.batcher = batcher self.bridge_as_comparison = bridge_as_comparison self.samples = sel...
class TrainGenerator(Dataset): def __init__(self, args_config, graph): self.args_config = args_config self.graph = graph self.user_dict = graph.train_user_dict self.exist_users = list(graph.exist_users) self.low_item_index = graph.item_range[0] self.high_item_index = ...
def capture_regexes(): regexes = [] real_compile = re.compile real_search = re.search real_sub = re.sub def capture_compile(regex, flags=0): regexes.append((regex, flags)) return real_compile(regex, flags) def capture_search(regex, target, flags=0): regexes.append((regex,...
def treutler_ahlrichs(n, *args, **kwargs): r = numpy.empty(n) dr = numpy.empty(n) step = (numpy.pi / (n + 1)) ln2 = (1 / numpy.log(2)) for i in range(n): x = numpy.cos(((i + 1) * step)) r[i] = (((- ln2) * ((1 + x) ** 0.6)) * numpy.log(((1 - x) / 2))) dr[i] = ((((step * numpy....
def load_question_set(qs_file_name, append_hat_for_LL=True, convert_svs_pattern=True): with open(qs_file_name) as f: lines = f.readlines() binary_qs_index = 0 continuous_qs_index = 0 binary_dict = {} numeric_dict = {} LL = re.compile(re.escape('LL-')) for line in lines: line ...
def test_async_subproc_command_no_stdout_on_save(): with pytest.raises(ContextError) as err: Command('arb', is_save=True, stdout='in') assert (str(err.value) == "You can't set `stdout` or `stderr` when `save` is True.") with pytest.raises(ContextError) as err: Command('arb', is_save=True, st...
_constructor class W_Character(W_Object): _attrs_ = _immutable_fields_ = ['value'] errorname = 'char' def __init__(self, val): assert isinstance(val, unicode) self.value = val def tostring(self): from pypy.objspace.std.bytesobject import string_escape_encode return ('#\\%...
class RDP(BaseDeepAD): def __init__(self, epochs=100, batch_size=64, lr=0.001, rep_dim=128, hidden_dims='100,50', act='LeakyReLU', bias=False, epoch_steps=(- 1), prt_steps=10, device='cuda', verbose=2, random_state=42): super(RDP, self).__init__(model_name='RDP', epochs=epochs, batch_size=batch_size, lr=lr,...
class IPS120_10(OxfordInstrumentsBase): _SWITCH_HEATER_HEATING_DELAY = 20 _SWITCH_HEATER_COOLING_DELAY = 20 _SWITCH_HEATER_SET_VALUES = {False: 0, True: 1, 'Force': 2} _SWITCH_HEATER_GET_VALUES = {0: False, 1: True, 2: False, 5: 'Heater fault, low heater current', 8: 'No switch fitted'} def __init__...
class FC6_Monitor(FC3_Monitor): removedKeywords = FC3_Monitor.removedKeywords removedAttrs = FC3_Monitor.removedAttrs def __init__(self, writePriority=0, *args, **kwargs): FC3_Monitor.__init__(self, writePriority, *args, **kwargs) self.probe = kwargs.get('probe', True) def __str__(self):...
def _create_isolated_env_virtualenv(path: str) -> tuple[(str, str)]: import virtualenv cmd = [str(path), '--no-setuptools', '--no-wheel', '--activators', ''] result = virtualenv.cli_run(cmd, setup_logging=False) executable = str(result.creator.exe) script_dir = str(result.creator.script_dir) ret...
class BuildInstructions(object): def __init__(self, build_instr_file=None): self.instructions = {} self.metadata = {} if build_instr_file: allheaders = get_inp_sections_details(build_instr_file) instructions = {} for (section, _) in allheaders.items(): ...
class TestInputContactMessageContentWithoutRequest(TestInputContactMessageContentBase): def test_slot_behaviour(self, input_contact_message_content): inst = input_contact_message_content for attr in inst.__slots__: assert (getattr(inst, attr, 'err') != 'err'), f"got extra slot '{attr}'" ...
class LengthColumn(NumericColumn): def __init__(self): super().__init__('~#length') def _get_min_width(self): return self._cell_width(util.format_time_display(((60 * 82) + 22))) def _fetch_value(self, model, iter_): return model.get_value(iter_).get('~#length', 0) def _apply_valu...
.pydicom def test_require_dicom_patient_position(): test_ds_dict = {key: pydicom.dcmread(test_coords.get_data_file(key)) for key in ORIENTATIONS_SUPPORTED} ds_no_orient = pydicom.dcmread(str(pymedphys.data_path('example_structures.dcm')), force=True) test_ds_dict['no orient'] = ds_no_orient test_orienta...
def get_param_from_h5(sdf_h5_file, cat_id, obj): h5_f = h5py.File(sdf_h5_file, 'r') try: if ('norm_params' in h5_f.keys()): norm_params = h5_f['norm_params'][:] else: raise Exception(cat_id, obj, 'no sdf and sample') finally: h5_f.close() return (norm_para...
('beeref.widgets.SceneToPixmapExporterDialog.exec', return_value=False) ('beeref.widgets.SceneToPixmapExporterDialog.value') def test_scene_to_pixmap_exporter_get_user_input_when_canceled(value_mock, exec_mock, view): exporter = SceneToPixmapExporter(view.scene) value = exporter.get_user_input(None) assert ...
class LossBuilder(): LOSS_DICT = {'edge': EdgeLoss, 'depth': DepthLoss} def __init__(self, weight_name, weight, name, img, pil_target): self.weight_name = weight_name self.weight = weight self.name = name self.img = img self.pil_target = pil_target def weight_category...
class PrideFacts(commands.Cog): def __init__(self, bot: Bot): self.bot = bot self.daily_fact_task = self.bot.loop.create_task(self.send_pride_fact_daily()) _task(Month.JUNE) async def send_pride_fact_daily(self) -> None: channel = self.bot.get_channel(Channels.sir_lancebot_playground...
('xarray.open_dataset') def test_1258(fake_open_dataset): from satpy import Scene fake_open_dataset.side_effect = generate_fake_abi_xr_dataset scene = Scene(abi_file_list, reader='abi_l1b') scene.load(['true_color_nocorr', 'C04'], calibration='radiance') resampled_scene = scene.resample(scene.coarse...
def _get_unit_vector_x(sat_sun_vec, unit_vector_z, angle_between_earth_and_sun): beta = angle_between_earth_and_sun sin_beta = np.sin(beta) cos_beta = np.cos(beta) cross1 = _get_uz_cross_satsun(unit_vector_z, sat_sun_vec) cross2 = cross_product(cross1, unit_vector_z) unit_vector_x = Vector3D(x=(...
class rpt(SWMMIOFile): def __init__(self, filePath): SWMMIOFile.__init__(self, filePath) meta_data = get_rpt_metadata(filePath) self.swmm_version = meta_data['swmm_version'] self.simulationStart = meta_data['simulation_start'] self.simulationEnd = meta_data['simulation_end'] ...
def bar(view_tmin, view_tmax, changes, tmin, tmax, sx): delta = ((view_tmax - view_tmin) / (sx - 2)) out = [ansi_dim] ic = 0 while ((ic < len(changes)) and (changes[ic][0] < view_tmin)): ic += 1 if ((0 < ic) and (ic < len(changes))): count = changes[(ic - 1)][1] else: cou...
class _MemoryStreamCloser(_StreamCloser): def __init__(self, write, close_on_exit, is_binary): super().__init__(write, close_on_exit) io_class = (io.BytesIO if is_binary else io.StringIO) fp = self._wrap(io_class)() assert (fp == self.fp) def close(self, parent_close=None): ...
def test_parse_empty_string(parser): line = '' statement = parser.parse(line) assert (statement == '') assert (statement.args == statement) assert (statement.raw == line) assert (statement.command == '') assert (statement.arg_list == []) assert (statement.multiline_command == '') ass...
def make_env(scenario_name, benchmark=False): from multiagent.environment import MultiAgentEnv import multiagent.scenarios as scenarios scenario = scenarios.load((scenario_name + '.py')).Scenario() world = scenario.make_world() if benchmark: env = MultiAgentEnv(world, scenario.reset_world, s...
def test_h_constraints_offxml(methanol, tmpdir): with tmpdir.as_cwd(): methanol.to_offxml(file_name='methanol.offxml', h_constraints=True) methanol_ff = ForceField('methanol.offxml') off_methanol = Molecule.from_rdkit(methanol.to_rdkit()) system = methanol_ff.create_openmm_system(top...
class SawyerButtonPressV1Policy(Policy): def _parse_obs(obs): return {'hand_pos': obs[:3], 'button_start_pos': obs[3:6], 'unused_info': obs[6:]} def get_action(self, obs): o_d = self._parse_obs(obs) action = Action({'delta_pos': np.arange(3), 'grab_effort': 3}) action['delta_pos'...
def convert(x, dtype=None): if isinstance(x, np.ma.MaskedArray): raise NotImplementedError('MaskedArrays are not supported') if (dtype is not None): x_ = _asarray(x, dtype=dtype) else: x_ = None if isinstance(x, int): try: x_ = autocast_int(x) ...
def _find_compound_unit(numerator_unit: str, denominator_unit: str, locale: ((Locale | str) | None)=LC_NUMERIC) -> (str | None): locale = Locale.parse(locale) resolved_numerator_unit = _find_unit_pattern(numerator_unit, locale=locale) resolved_denominator_unit = _find_unit_pattern(denominator_unit, locale=l...
_optimizer('lamb') class FairseqLAMB(LegacyFairseqOptimizer): def __init__(self, args, params): super().__init__(args) try: from apex.optimizers import FusedLAMB self._optimizer = FusedLAMB(params, **self.optimizer_config) except ImportError: raise ImportE...
class TestOps(): def test_eq(self, dummy_memmap): memmap = dummy_memmap assert (memmap == memmap.clone()).all() assert (memmap.clone() == memmap).all() def test_fill_(self, dummy_memmap): memmap = dummy_memmap.fill_(1.0) assert (memmap == 1).all() assert isinstanc...
def get_files(**kwargs): metadata_directory = kwargs.get('metadata_directory', '') shared_data_directory = kwargs.get('shared_data_directory', '') files = [] for f in get_template_files(**kwargs): if (str(f.path) == 'LICENSE.txt'): files.append(File(Path(metadata_directory, 'licenses...
def test_info(run_cli): funcname = tests.utils.get_funcname() argsprefix = ('data/mockargs/%s_' % funcname) cliprefix = ('data/clioutput/%s_' % funcname) prod_accessible = {'ids': [1, 7]} prod_get = {'products': [{'id': 1, 'name': 'Prod 1 Test'}, {'id': 7, 'name': 'test-fake-product'}]} fakebz =...
def test_on_success_exception(server_app): custom = MagicMock(side_effect=RuntimeError('something happened')) server_app.on('custom', custom) test_client = server_app.sio.test_client(server_app.app) result = test_client.emit('custom', callback=True) custom.assert_called_once_with(server_app) ass...
_keras_backend_version_to_v2 def convert_h5_model_to_pb_model(h5_model_path: AnyStr, custom_objects: Dict=None): supported_file_types = ['h5', 'hdf5'] def validate_model_path() -> Tuple[(str, str)]: if (not os.path.exists(h5_model_path)): raise FileNotFoundError(errno.ENOENT, os.strerror(err...
class YolosFeatureExtractor(YolosImageProcessor): def __init__(self, *args, **kwargs) -> None: warnings.warn('The class YolosFeatureExtractor is deprecated and will be removed in version 5 of Transformers. Please use YolosImageProcessor instead.', FutureWarning) super().__init__(*args, **kwargs)
class Solution(): def sumOddLengthSubarrays(self, arr: List[int]) -> int: gap = 1 res = 0 n = len(arr) while (gap < (n + 1)): i = 0 while (i < ((n - gap) + 1)): for j in range(i, (i + gap)): res += arr[j] i +...
class CmdDrop(COMMAND_DEFAULT_CLASS): key = 'drop' locks = 'cmd:all()' arg_regex = '\\s|$' def func(self): caller = self.caller if (not self.args): caller.msg('Drop what?') return obj = caller.search(self.args, location=caller, nofound_string=("You aren't ...
class AbstractChunkIO(): def calc_offset(cls, chunk_x: int, chunk_z: int) -> int: raise NotImplementedError(cls.__name__) def find_chunk(cls, location: int) -> tuple: raise NotImplementedError(cls.__name__) def fetch_chunk(cls, world_path: str, chunk_x: int, chunk_z: int): raise NotI...
class FC6_TestCase(CommandTest): command = 'iscsi' def runTest(self): self.assert_parse('iscsi --ipaddr=1.1.1.1', 'iscsi --ipaddr=1.1.1.1\n') self.assert_parse('iscsi --ipaddr=1.1.1.1 --target=tar --port=1234 --user=name --password=secret', 'iscsi --target=tar --ipaddr=1.1.1.1 --port=1234 --user...
def setUpModule(): global cell, cell1 cell = gto.Cell() cell.build(unit='B', a=(numpy.eye(3) * 4), mesh=([11] * 3), atom='H 0 0 0; H 0 0 1.8', verbose=0, basis='sto3g') cell1 = gto.Cell() cell1.atom = '\n He 1.3 .2 .3\n He .1 .1 1.1 ' cell1.basis = {'He': [[0, [0.8, 1...
class SpringMassDataset(object): def __init__(self, k, m, A0, c, v0=0, et=10): super(SpringMassDataset, self).__init__() self.k = k self.m = m self.A0 = A0 self.c = c self.et = et self.v0 = v0 self.Nt = int(1000) self.omega_n = np.sqrt((k / m))...
def _get_command_line_arguments() -> Dict: parser = argparse.ArgumentParser() parser.add_argument(('--' + Args.FEATURES_DIR), required=True, help='Dataset directory for reading and writing features') parser.add_argument(('--' + Args.PCA_PATH), required=True, help='Pickle containing the PCA transform') p...
class LSTM_Parrallel(nn.Module): def __init__(self): super(LSTM_Parrallel, self).__init__() self.encoder_1 = LSTM_encoder() self.encoder_2 = LSTM_encoder() self.classifier = nn.Linear(64, 14) def forward(self, x1, x2, flag='unsupervised'): if (flag == 'supervised'): ...
class Mean(ScalarOp): identity = 0 commutative = True associative = False nfunc_spec = ('mean', 2, 1) nfunc_variadic = 'mean' def impl(self, *inputs): return (sum(inputs) / len(inputs)) def c_code(self, node, name, inputs, outputs, sub): (z,) = outputs if (not inputs)...
def download_release(release_scans, out_dir, file_types, use_v1_sens): if (len(release_scans) == 0): return print((((('Downloading ScanNet ' + RELEASE_NAME) + ' release to ') + out_dir) + '...')) for scan_id in release_scans: scan_out_dir = os.path.join(out_dir, scan_id) download_sca...
def generate_sample(intensity, T, n): Sequnces = [] i = 0 while True: seq = [] t = 0 while True: intens1 = intensity.getUpperBound(t, T) dt = np.random.exponential((1 / intens1)) new_t = (t + dt) if (new_t > T): break ...
def get_sequence(gr, path=None, pyfaidx_fasta=None): try: import pyfaidx except ImportError: print('pyfaidx must be installed to get fasta sequences. Use `conda install -c bioconda pyfaidx` or `pip install pyfaidx` to install it.') sys.exit(1) if (pyfaidx_fasta is None): if (...
class PublisherPlacementReportView(PublisherAccessMixin, BaseReportView): export_view = 'publisher_placement_report_export' impression_model = PlacementImpression template_name = 'adserver/reports/publisher-placement.html' fieldnames = ['index', 'views', 'clicks', 'ctr', 'ecpm', 'revenue', 'revenue_shar...
class DockerSchema2ManifestList(ManifestListInterface): METASCHEMA = {'type': 'object', 'properties': {DOCKER_SCHEMA2_MANIFESTLIST_VERSION_KEY: {'type': 'number', 'description': 'The version of the manifest list. Must always be `2`.', 'minimum': 2, 'maximum': 2}, DOCKER_SCHEMA2_MANIFESTLIST_MEDIATYPE_KEY: {'type': ...
def test_optional_columns(hatch, helpers, temp_dir, config_file): config_file.model.template.plugins['default']['tests'] = False config_file.save() project_name = 'My.App' with temp_dir.as_cwd(): result = hatch('new', project_name) assert (result.exit_code == 0), result.output project_pa...
class EnumSpecifier(object): def __init__(self, tag, enumerators): self.tag = tag self.enumerators = enumerators def __repr__(self): s = 'enum' if self.tag: s += (' %s' % self.tag) if self.enumerators: s += (' {%s}' % ', '.join([repr(e) for e in se...
class OOTestCases(unittest.TestCase): class TestClass(): field1: NonNull[int] field2: str class TestSingleton(): field1: str def test_nonnull(self): self.assertRaises(ValueError, self.TestClass, None, {'field1': None, 'field2': 'test'}) def test_to_string(self): s...
class TestBuiltinMethods(TestNameCheckVisitorBase): _passes() def test_method_wrapper(self): import collections.abc def capybara(): r = range(10) assert_is_value(r, KnownValue(range(10))) assert_is_value(r.__iter__(), GenericValue(collections.abc.Iterator, [Ty...
def train(model, dataset, optimizer, criterion, epoch, args, data_start_index): model.train() if (data_start_index == 0): dataset.shuffle('train', seed=(epoch + args.seed)) if (args.epoch_max_len is not None): data_end_index = min((data_start_index + args.epoch_max_len), len(dataset.splits['...
def test_console_ansiformat(): f = console.ansiformat c = console.codes all_attrs = f('+*_blue_*+', 'text') assert ((c['blue'] in all_attrs) and (c['blink'] in all_attrs)) assert ((c['bold'] in all_attrs) and (c['underline'] in all_attrs)) assert (c['reset'] in all_attrs) assert raises(KeyEr...
def split_data(df, window_size, test_size, val_size=0, use_ratio=True): expected_type = (float if use_ratio else int) if ((not isinstance(test_size, expected_type)) or (val_size and (not isinstance(val_size, expected_type)))): raise ValueError('use_ratio={} while size args are of type {}'.format(use_rat...
class ExprIf(GrammarSymbol): def __init__(self): GrammarSymbol.__init__(self) self.lbp = 5 def led(self, parser, left): cond_ = left then_ = parser.expression(self.lbp) parser.expect(ExprElse, ':') else_ = parser.expression(self.lbp) return parser.mgr.Ite(...
def main(): parser = argparse.ArgumentParser() parser.add_argument('directory') parser.add_argument('--binary', required=True) parser.add_argument('--version', required=True) args = parser.parse_args() directory = Path(args.directory).absolute() staged_binary = Path(args.binary).absolute() ...
class FakeWallet(): def __init__(self, fiat_value): super().__init__() self.fiat_value = fiat_value self.db = WalletDB('{}', manual_upgrades=True) self.db.transactions = self.db.verified_tx = {'abc': 'Tx'} def get_tx_height(self, txid): return TxMinedInfo(height=10, conf=...
_2_unicode_compatible class Proposal(TimeAuditModel): conference = models.ForeignKey(Conference, on_delete=models.CASCADE) proposal_section = models.ForeignKey(ProposalSection, verbose_name='Proposal Section', on_delete=models.CASCADE) proposal_type = models.ForeignKey(ProposalType, verbose_name='Proposal T...
class Transform(Operator): grouping = Grouping.T(default=SensorGrouping.D()) translation = ReplaceComponentTranslation(suffix='T{system}') def _out_codes(self, group): return [self.translation.translate(group[0]).format(component=c, system=self.components.lower()) for c in self.components]
def learned_context(quality, metric='mse', pretrained=False, progress=True, **kwargs): if (metric not in ('mse', 'ms-ssim')): raise ValueError(f'Invalid metric "{metric}"') if ((quality < 1) or (quality > 8)): raise ValueError(f'Invalid quality "{quality}", should be between (1, 8)') return ...
class EAESolutionVerifier(): def __init__(self, gold_set: set, cur_event: Dict[(str, Any)], tokens: List[str]) -> None: self.gold_set = gold_set self.cur_event = cur_event self.tokens = tokens def verify(self, event_obj): predicted_args = convert_event_obj_to_dict(event_obj, rais...
def remove_duplicates_from_file(infile_path, outfile_path='temp..bopscrk'): lines_seen = set() outfile = open(outfile_path, 'w') infile = open(infile_path, 'r') for line in infile: if (line not in lines_seen): outfile.write(line) lines_seen.add(line) outfile.close() ...
class TestSimpleStubModuleNotPreferred(): (autouse=True, scope='class') def built(self, builder): builder('pyiexample2', warningiserror=True) def test_integration(self, parse): example_file = parse('_build/html/autoapi/example/index.html') assert ('DoNotFindThis' not in example_file)...
def do_LR(op, stack, state): arg1_val = stack.pop() size = SIZE if z3.is_bv(arg1_val): arg1 = arg1_val size = arg1.size() elif isinstance(arg1_val, str): arg1 = state.registers[arg1_val] size = arg1.size() else: arg1 = prepare(arg1_val) (arg2,) = pop_value...
class DataCollatorForMultipleChoice(): tokenizer: PreTrainedTokenizerBase padding: Union[(bool, str, PaddingStrategy)] = True max_length: Optional[int] = None pad_to_multiple_of: Optional[int] = None def __call__(self, features): label_name = ('label' if ('label' in features[0].keys()) else ...