Datasets:

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PaoloMaccallini

/

CompareME

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Error code:   DatasetGenerationCastError
Exception:    DatasetGenerationCastError
Message:      An error occurred while generating the dataset

All the data files must have the same columns, but at some point there are 5 new columns ({'fold.change', 'Tissue', 'samples', 'Tissue.Specific.Genes', 'Log10PValue'}) and 11 missing columns ({'ID', 'RichFactor', 'Count', 'pvalue', 'qvalue', 'BgRatio', 'method', 'Description', 'FoldEnrichment', 'geneID', 'GeneRatio'}).

This happened while the csv dataset builder was generating data using

zip://Random/1000_Tissue_ORA.tsv::/tmp/hf-datasets-cache/medium/datasets/93380107955103-config-parquet-and-info-PaoloMaccallini-CompareME-cff7a352/hub/datasets--PaoloMaccallini--CompareME/snapshots/ee25429518ab752b064582026df8c893e41f4684/Random.zip, [/tmp/hf-datasets-cache/medium/datasets/93380107955103-config-parquet-and-info-PaoloMaccallini-CompareME-cff7a352/hub/datasets--PaoloMaccallini--CompareME/snapshots/ee25429518ab752b064582026df8c893e41f4684/Random.zip (origin=hf://datasets/PaoloMaccallini/CompareME@ee25429518ab752b064582026df8c893e41f4684/Random.zip)]

Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1890, in _prepare_split_single
                  writer.write_table(table)
                File "/usr/local/lib/python3.12/site-packages/datasets/arrow_writer.py", line 760, in write_table
                  pa_table = table_cast(pa_table, self._schema)
                             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2272, in table_cast
                  return cast_table_to_schema(table, schema)
                         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2218, in cast_table_to_schema
                  raise CastError(
              datasets.table.CastError: Couldn't cast
              Log10PValue: double
              Tissue.Specific.Genes: int64
              fold.change: double
              samples: int64
              Tissue: string
              p.adjust: double
              zScore: double
              -- schema metadata --
              pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 1098
              to
              {'ID': Value('string'), 'Description': Value('string'), 'GeneRatio': Value('string'), 'BgRatio': Value('string'), 'RichFactor': Value('float64'), 'FoldEnrichment': Value('float64'), 'zScore': Value('float64'), 'pvalue': Value('float64'), 'p.adjust': Value('float64'), 'qvalue': Value('float64'), 'geneID': Value('string'), 'Count': Value('int64'), 'method': Value('string')}
              because column names don't match
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1347, in compute_config_parquet_and_info_response
                  parquet_operations = convert_to_parquet(builder)
                                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 980, in convert_to_parquet
                  builder.download_and_prepare(
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 884, in download_and_prepare
                  self._download_and_prepare(
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 947, in _download_and_prepare
                  self._prepare_split(split_generator, **prepare_split_kwargs)
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1739, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                                               ^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1892, in _prepare_split_single
                  raise DatasetGenerationCastError.from_cast_error(
              datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
              
              All the data files must have the same columns, but at some point there are 5 new columns ({'fold.change', 'Tissue', 'samples', 'Tissue.Specific.Genes', 'Log10PValue'}) and 11 missing columns ({'ID', 'RichFactor', 'Count', 'pvalue', 'qvalue', 'BgRatio', 'method', 'Description', 'FoldEnrichment', 'geneID', 'GeneRatio'}).
              
              This happened while the csv dataset builder was generating data using
              
              zip://Random/1000_Tissue_ORA.tsv::/tmp/hf-datasets-cache/medium/datasets/93380107955103-config-parquet-and-info-PaoloMaccallini-CompareME-cff7a352/hub/datasets--PaoloMaccallini--CompareME/snapshots/ee25429518ab752b064582026df8c893e41f4684/Random.zip, [/tmp/hf-datasets-cache/medium/datasets/93380107955103-config-parquet-and-info-PaoloMaccallini-CompareME-cff7a352/hub/datasets--PaoloMaccallini--CompareME/snapshots/ee25429518ab752b064582026df8c893e41f4684/Random.zip (origin=hf://datasets/PaoloMaccallini/CompareME@ee25429518ab752b064582026df8c893e41f4684/Random.zip)]
              
              Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)