File size: 1,803 Bytes
5e797a4 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 | """Module in charge of MPI execution of tasks."""
import pickle
import shlex
import subprocess
import sys
from pathlib import Path
from typing import Any, Optional
from shutil import which
from haddock import log
from haddock.core.exceptions import HaddockTermination
class MPIScheduler:
"""Schedules tasks to be executed via MPI."""
def __init__(self, tasks: list[Any], ncores: Optional[int] = None) -> None:
self.tasks = tasks
self.cwd = Path.cwd()
self.ncores = ncores
def run(self) -> None:
"""Send it to the haddock3-mpitask runner."""
pkl_tasks = self._pickle_tasks()
log.info(
f"Executing tasks with the haddock3-mpitask runner using "
f"{self.ncores} processors..."
)
if which("mpirun") is not None:
cmd = f"mpirun -np {self.ncores} haddock3-mpitask {pkl_tasks}"
elif which("srun") is not None:
cmd = f"srun haddock3-mpitask {pkl_tasks}"
else:
log.error("mpirun or srun are not available on the system")
log.error("Terminating run!")
raise HaddockTermination
log.debug(f"MPI cmd is {cmd}")
p = subprocess.run(
shlex.split(cmd), stdout=subprocess.PIPE, stderr=subprocess.PIPE
)
# out = p.stdout.decode("utf-8")
err = p.stderr.decode("utf-8")
if err:
log.error(err)
log.error("Terminating run!")
raise HaddockTermination
def _pickle_tasks(self) -> Path:
"""Pickle the tasks."""
fpath = Path(self.cwd, "mpi.pkl")
log.debug(f"Pickling the tasks at {fpath}")
with open(fpath, "wb") as output_handler:
pickle.dump(self.tasks, output_handler)
return fpath
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