Reset repository and upload final project (part 22)

.gitattributes

@@ -131,3 +131,27 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
 .venv_haddock/lib/python3.12/site-packages/scipy/cluster/_vq.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
 .venv_haddock/lib/python3.12/site-packages/scipy/fft/_pocketfft/pypocketfft.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
 .venv_haddock/lib/python3.12/site-packages/scipy/fftpack/convolve.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/integrate/_quadpack.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/integrate/_vode.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/interpolate/_dfitpack.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/interpolate/_dierckx.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/interpolate/_fitpack.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/interpolate/_interpnd.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/interpolate/_ppoly.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/interpolate/_rbfinterp_pythran.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/interpolate/_rgi_cython.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/io/_fast_matrix_market/_fmm_core.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/io/matlab/_mio5_utils.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/io/matlab/_streams.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/_batched_linalg.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/_cythonized_array_utils.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/_decomp_interpolative.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/_decomp_lu_cython.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/_decomp_update.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/_fblas.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/_flapack.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/_linalg_pythran.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/_matfuncs_expm.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/_solve_toeplitz.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/cython_blas.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text
+.venv_haddock/lib/python3.12/site-packages/scipy/linalg/cython_lapack.cpython-312-darwin.so filter=lfs diff=lfs merge=lfs -text

.venv_haddock/lib/python3.12/site-packages/scipy/fftpack/tests/test_basic.py

@@ -0,0 +1,877 @@
+# Created by Pearu Peterson, September 2002
+
+from numpy.testing import (assert_, assert_equal, assert_array_almost_equal,
+                           assert_array_almost_equal_nulp, assert_array_less)
+import pytest
+from pytest import raises as assert_raises
+from scipy.fftpack import ifft, fft, fftn, ifftn, rfft, irfft, fft2
+
+from numpy import (arange, array, asarray, zeros, dot, exp, pi,
+                   swapaxes, double, cdouble)
+import numpy as np
+import numpy.fft
+from numpy.random import rand
+
+# "large" composite numbers supported by FFTPACK
+LARGE_COMPOSITE_SIZES = [
+    2**13,
+    2**5 * 3**5,
+    2**3 * 3**3 * 5**2,
+]
+SMALL_COMPOSITE_SIZES = [
+    2,
+    2*3*5,
+    2*2*3*3,
+]
+# prime
+LARGE_PRIME_SIZES = [
+    2011
+]
+SMALL_PRIME_SIZES = [
+    29
+]
+
+
+def _assert_close_in_norm(x, y, rtol, size, rdt):
+    # helper function for testing
+    err_msg = f"size: {size}  rdt: {rdt}"
+    assert_array_less(np.linalg.norm(x - y), rtol*np.linalg.norm(x), err_msg)
+
+
+def random(size):
+    return rand(*size)
+
+
+def direct_dft(x):
+    x = asarray(x)
+    n = len(x)
+    y = zeros(n, dtype=cdouble)
+    w = -arange(n)*(2j*pi/n)
+    for i in range(n):
+        y[i] = dot(exp(i*w), x)
+    return y
+
+
+def direct_idft(x):
+    x = asarray(x)
+    n = len(x)
+    y = zeros(n, dtype=cdouble)
+    w = arange(n)*(2j*pi/n)
+    for i in range(n):
+        y[i] = dot(exp(i*w), x)/n
+    return y
+
+
+def direct_dftn(x):
+    x = asarray(x)
+    for axis in range(len(x.shape)):
+        x = fft(x, axis=axis)
+    return x
+
+
+def direct_idftn(x):
+    x = asarray(x)
+    for axis in range(len(x.shape)):
+        x = ifft(x, axis=axis)
+    return x
+
+
+def direct_rdft(x):
+    x = asarray(x)
+    n = len(x)
+    w = -arange(n)*(2j*pi/n)
+    r = zeros(n, dtype=double)
+    for i in range(n//2+1):
+        y = dot(exp(i*w), x)
+        if i:
+            r[2*i-1] = y.real
+            if 2*i < n:
+                r[2*i] = y.imag
+        else:
+            r[0] = y.real
+    return r
+
+
+def direct_irdft(x):
+    x = asarray(x)
+    n = len(x)
+    x1 = zeros(n, dtype=cdouble)
+    for i in range(n//2+1):
+        if i:
+            if 2*i < n:
+                x1[i] = x[2*i-1] + 1j*x[2*i]
+                x1[n-i] = x[2*i-1] - 1j*x[2*i]
+            else:
+                x1[i] = x[2*i-1]
+        else:
+            x1[0] = x[0]
+    return direct_idft(x1).real
+
+
+class _TestFFTBase:
+    def setup_method(self):
+        self.cdt = None
+        self.rdt = None
+        np.random.seed(1234)
+
+    def test_definition(self):
+        x = np.array([1,2,3,4+1j,1,2,3,4+2j], dtype=self.cdt)
+        y = fft(x)
+        assert_equal(y.dtype, self.cdt)
+        y1 = direct_dft(x)
+        assert_array_almost_equal(y,y1)
+        x = np.array([1,2,3,4+0j,5], dtype=self.cdt)
+        assert_array_almost_equal(fft(x),direct_dft(x))
+
+    def test_n_argument_real(self):
+        x1 = np.array([1,2,3,4], dtype=self.rdt)
+        x2 = np.array([1,2,3,4], dtype=self.rdt)
+        y = fft([x1,x2],n=4)
+        assert_equal(y.dtype, self.cdt)
+        assert_equal(y.shape,(2,4))
+        assert_array_almost_equal(y[0],direct_dft(x1))
+        assert_array_almost_equal(y[1],direct_dft(x2))
+
+    def _test_n_argument_complex(self):
+        x1 = np.array([1,2,3,4+1j], dtype=self.cdt)
+        x2 = np.array([1,2,3,4+1j], dtype=self.cdt)
+        y = fft([x1,x2],n=4)
+        assert_equal(y.dtype, self.cdt)
+        assert_equal(y.shape,(2,4))
+        assert_array_almost_equal(y[0],direct_dft(x1))
+        assert_array_almost_equal(y[1],direct_dft(x2))
+
+    def test_invalid_sizes(self):
+        assert_raises(ValueError, fft, [])
+        assert_raises(ValueError, fft, [[1,1],[2,2]], -5)
+
+
+class TestDoubleFFT(_TestFFTBase):
+    def setup_method(self):
+        self.cdt = np.complex128
+        self.rdt = np.float64
+
+
+class TestSingleFFT(_TestFFTBase):
+    def setup_method(self):
+        self.cdt = np.complex64
+        self.rdt = np.float32
+
+    reason = ("single-precision FFT implementation is partially disabled, "
+              "until accuracy issues with large prime powers are resolved")
+
+    @pytest.mark.xfail(run=False, reason=reason)
+    def test_notice(self):
+        pass
+
+
+class TestFloat16FFT:
+
+    def test_1_argument_real(self):
+        x1 = np.array([1, 2, 3, 4], dtype=np.float16)
+        y = fft(x1, n=4)
+        assert_equal(y.dtype, np.complex64)
+        assert_equal(y.shape, (4, ))
+        assert_array_almost_equal(y, direct_dft(x1.astype(np.float32)))
+
+    def test_n_argument_real(self):
+        x1 = np.array([1, 2, 3, 4], dtype=np.float16)
+        x2 = np.array([1, 2, 3, 4], dtype=np.float16)
+        y = fft([x1, x2], n=4)
+        assert_equal(y.dtype, np.complex64)
+        assert_equal(y.shape, (2, 4))
+        assert_array_almost_equal(y[0], direct_dft(x1.astype(np.float32)))
+        assert_array_almost_equal(y[1], direct_dft(x2.astype(np.float32)))
+
+
+class _TestIFFTBase:
+    def setup_method(self):
+        np.random.seed(1234)
+
+    def test_definition(self):
+        x = np.array([1,2,3,4+1j,1,2,3,4+2j], self.cdt)
+        y = ifft(x)
+        y1 = direct_idft(x)
+        assert_equal(y.dtype, self.cdt)
+        assert_array_almost_equal(y,y1)
+
+        x = np.array([1,2,3,4+0j,5], self.cdt)
+        assert_array_almost_equal(ifft(x),direct_idft(x))
+
+    def test_definition_real(self):
+        x = np.array([1,2,3,4,1,2,3,4], self.rdt)
+        y = ifft(x)
+        assert_equal(y.dtype, self.cdt)
+        y1 = direct_idft(x)
+        assert_array_almost_equal(y,y1)
+
+        x = np.array([1,2,3,4,5], dtype=self.rdt)
+        assert_equal(y.dtype, self.cdt)
+        assert_array_almost_equal(ifft(x),direct_idft(x))
+
+    def test_random_complex(self):
+        for size in [1,51,111,100,200,64,128,256,1024]:
+            x = random([size]).astype(self.cdt)
+            x = random([size]).astype(self.cdt) + 1j*x
+            y1 = ifft(fft(x))
+            y2 = fft(ifft(x))
+            assert_equal(y1.dtype, self.cdt)
+            assert_equal(y2.dtype, self.cdt)
+            assert_array_almost_equal(y1, x)
+            assert_array_almost_equal(y2, x)
+
+    def test_random_real(self):
+        for size in [1,51,111,100,200,64,128,256,1024]:
+            x = random([size]).astype(self.rdt)
+            y1 = ifft(fft(x))
+            y2 = fft(ifft(x))
+            assert_equal(y1.dtype, self.cdt)
+            assert_equal(y2.dtype, self.cdt)
+            assert_array_almost_equal(y1, x)
+            assert_array_almost_equal(y2, x)
+
+    def test_size_accuracy(self):
+        # Sanity check for the accuracy for prime and non-prime sized inputs
+        if self.rdt == np.float32:
+            rtol = 1e-5
+        elif self.rdt == np.float64:
+            rtol = 1e-10
+
+        for size in LARGE_COMPOSITE_SIZES + LARGE_PRIME_SIZES:
+            np.random.seed(1234)
+            x = np.random.rand(size).astype(self.rdt)
+            y = ifft(fft(x))
+            _assert_close_in_norm(x, y, rtol, size, self.rdt)
+            y = fft(ifft(x))
+            _assert_close_in_norm(x, y, rtol, size, self.rdt)
+
+            x = (x + 1j*np.random.rand(size)).astype(self.cdt)
+            y = ifft(fft(x))
+            _assert_close_in_norm(x, y, rtol, size, self.rdt)
+            y = fft(ifft(x))
+            _assert_close_in_norm(x, y, rtol, size, self.rdt)
+
+    def test_invalid_sizes(self):
+        assert_raises(ValueError, ifft, [])
+        assert_raises(ValueError, ifft, [[1,1],[2,2]], -5)
+
+
+class TestDoubleIFFT(_TestIFFTBase):
+    def setup_method(self):
+        self.cdt = np.complex128
+        self.rdt = np.float64
+
+
+class TestSingleIFFT(_TestIFFTBase):
+    def setup_method(self):
+        self.cdt = np.complex64
+        self.rdt = np.float32
+
+
+class _TestRFFTBase:
+    def setup_method(self):
+        np.random.seed(1234)
+
+    def test_definition(self):
+        for t in [[1, 2, 3, 4, 1, 2, 3, 4], [1, 2, 3, 4, 1, 2, 3, 4, 5]]:
+            x = np.array(t, dtype=self.rdt)
+            y = rfft(x)
+            y1 = direct_rdft(x)
+            assert_array_almost_equal(y,y1)
+            assert_equal(y.dtype, self.rdt)
+
+    def test_invalid_sizes(self):
+        assert_raises(ValueError, rfft, [])
+        assert_raises(ValueError, rfft, [[1,1],[2,2]], -5)
+
+    # See gh-5790
+    class MockSeries:
+        def __init__(self, data):
+            self.data = np.asarray(data)
+
+        def __getattr__(self, item):
+            try:
+                return getattr(self.data, item)
+            except AttributeError as e:
+                raise AttributeError("'MockSeries' object "
+                                      f"has no attribute '{item}'") from e
+
+    def test_non_ndarray_with_dtype(self):
+        x = np.array([1., 2., 3., 4., 5.])
+        xs = _TestRFFTBase.MockSeries(x)
+
+        expected = [1, 2, 3, 4, 5]
+        rfft(xs)
+
+        # Data should not have been overwritten
+        assert_equal(x, expected)
+        assert_equal(xs.data, expected)
+
+    def test_complex_input(self):
+        assert_raises(TypeError, rfft, np.arange(4, dtype=np.complex64))
+
+
+class TestRFFTDouble(_TestRFFTBase):
+    def setup_method(self):
+        self.cdt = np.complex128
+        self.rdt = np.float64
+
+
+class TestRFFTSingle(_TestRFFTBase):
+    def setup_method(self):
+        self.cdt = np.complex64
+        self.rdt = np.float32
+
+
+class _TestIRFFTBase:
+    def setup_method(self):
+        np.random.seed(1234)
+
+    def test_definition(self):
+        x1 = [1,2,3,4,1,2,3,4]
+        x1_1 = [1,2+3j,4+1j,2+3j,4,2-3j,4-1j,2-3j]
+        x2 = [1,2,3,4,1,2,3,4,5]
+        x2_1 = [1,2+3j,4+1j,2+3j,4+5j,4-5j,2-3j,4-1j,2-3j]
+
+        def _test(x, xr):
+            y = irfft(np.array(x, dtype=self.rdt))
+            y1 = direct_irdft(x)
+            assert_equal(y.dtype, self.rdt)
+            assert_array_almost_equal(y,y1, decimal=self.ndec)
+            assert_array_almost_equal(y,ifft(xr), decimal=self.ndec)
+
+        _test(x1, x1_1)
+        _test(x2, x2_1)
+
+    def test_random_real(self):
+        for size in [1,51,111,100,200,64,128,256,1024]:
+            x = random([size]).astype(self.rdt)
+            y1 = irfft(rfft(x))
+            y2 = rfft(irfft(x))
+            assert_equal(y1.dtype, self.rdt)
+            assert_equal(y2.dtype, self.rdt)
+            assert_array_almost_equal(y1, x, decimal=self.ndec, err_msg=f"size={size}")
+            assert_array_almost_equal(y2, x, decimal=self.ndec, err_msg=f"size={size}")
+
+    def test_size_accuracy(self):
+        # Sanity check for the accuracy for prime and non-prime sized inputs
+        if self.rdt == np.float32:
+            rtol = 1e-5
+        elif self.rdt == np.float64:
+            rtol = 1e-10
+
+        for size in LARGE_COMPOSITE_SIZES + LARGE_PRIME_SIZES:
+            np.random.seed(1234)
+            x = np.random.rand(size).astype(self.rdt)
+            y = irfft(rfft(x))
+            _assert_close_in_norm(x, y, rtol, size, self.rdt)
+            y = rfft(irfft(x))
+            _assert_close_in_norm(x, y, rtol, size, self.rdt)
+
+    def test_invalid_sizes(self):
+        assert_raises(ValueError, irfft, [])
+        assert_raises(ValueError, irfft, [[1,1],[2,2]], -5)
+
+    def test_complex_input(self):
+        assert_raises(TypeError, irfft, np.arange(4, dtype=np.complex64))
+
+
+# self.ndec is bogus; we should have a assert_array_approx_equal for number of
+# significant digits
+
+class TestIRFFTDouble(_TestIRFFTBase):
+    def setup_method(self):
+        self.cdt = np.complex128
+        self.rdt = np.float64
+        self.ndec = 14
+
+
+class TestIRFFTSingle(_TestIRFFTBase):
+    def setup_method(self):
+        self.cdt = np.complex64
+        self.rdt = np.float32
+        self.ndec = 5
+
+
+class Testfft2:
+    def setup_method(self):
+        np.random.seed(1234)
+
+    def test_regression_244(self):
+        """FFT returns wrong result with axes parameter."""
+        # fftn (and hence fft2) used to break when both axes and shape were
+        # used
+        x = numpy.ones((4, 4, 2))
+        y = fft2(x, shape=(8, 8), axes=(-3, -2))
+        y_r = numpy.fft.fftn(x, s=(8, 8), axes=(-3, -2))
+        assert_array_almost_equal(y, y_r)
+
+    def test_invalid_sizes(self):
+        assert_raises(ValueError, fft2, [[]])
+        assert_raises(ValueError, fft2, [[1, 1], [2, 2]], (4, -3))
+
+
+class TestFftnSingle:
+    def setup_method(self):
+        np.random.seed(1234)
+
+    def test_definition(self):
+        x = [[1, 2, 3],
+             [4, 5, 6],
+             [7, 8, 9]]
+        y = fftn(np.array(x, np.float32))
+        assert_(y.dtype == np.complex64,
+                msg="double precision output with single precision")
+
+        y_r = np.array(fftn(x), np.complex64)
+        assert_array_almost_equal_nulp(y, y_r)
+
+    @pytest.mark.parametrize('size', SMALL_COMPOSITE_SIZES + SMALL_PRIME_SIZES)
+    def test_size_accuracy_small(self, size):
+        rng = np.random.default_rng(1234)
+        x = rng.random((size, size)) + 1j*rng.random((size, size))
+        y1 = fftn(x.real.astype(np.float32))
+        y2 = fftn(x.real.astype(np.float64)).astype(np.complex64)
+
+        assert_equal(y1.dtype, np.complex64)
+        assert_array_almost_equal_nulp(y1, y2, 2000)
+
+    @pytest.mark.parametrize('size', LARGE_COMPOSITE_SIZES + LARGE_PRIME_SIZES)
+    def test_size_accuracy_large(self, size):
+        rand = np.random.default_rng(1234)
+        x = rand.random((size, 3)) + 1j*rand.random((size, 3))
+        y1 = fftn(x.real.astype(np.float32))
+        y2 = fftn(x.real.astype(np.float64)).astype(np.complex64)
+
+        assert_equal(y1.dtype, np.complex64)
+        assert_array_almost_equal_nulp(y1, y2, 2000)
+
+    def test_definition_float16(self):
+        x = [[1, 2, 3],
+             [4, 5, 6],
+             [7, 8, 9]]
+        y = fftn(np.array(x, np.float16))
+        assert_equal(y.dtype, np.complex64)
+        y_r = np.array(fftn(x), np.complex64)
+        assert_array_almost_equal_nulp(y, y_r)
+
+    @pytest.mark.parametrize('size', SMALL_COMPOSITE_SIZES + SMALL_PRIME_SIZES)
+    def test_float16_input_small(self, size):
+        rng = np.random.default_rng(1234)
+        x = rng.random((size, size)) + 1j * rng.random((size, size))
+        y1 = fftn(x.real.astype(np.float16))
+        y2 = fftn(x.real.astype(np.float64)).astype(np.complex64)
+
+        assert_equal(y1.dtype, np.complex64)
+        assert_array_almost_equal_nulp(y1, y2, 5e5)
+
+    @pytest.mark.parametrize('size', LARGE_COMPOSITE_SIZES + LARGE_PRIME_SIZES)
+    def test_float16_input_large(self, size):
+        rng = np.random.default_rng(1234)
+        x = rng.random((size, 3)) + 1j*rng.random((size, 3))
+        y1 = fftn(x.real.astype(np.float16))
+        y2 = fftn(x.real.astype(np.float64)).astype(np.complex64)
+
+        assert_equal(y1.dtype, np.complex64)
+        assert_array_almost_equal_nulp(y1, y2, 2e6)
+
+
+class TestFftn:
+    def setup_method(self):
+        np.random.seed(1234)
+
+    def test_definition(self):
+        x = [[1, 2, 3],
+             [4, 5, 6],
+             [7, 8, 9]]
+        y = fftn(x)
+        assert_array_almost_equal(y, direct_dftn(x))
+
+        x = random((20, 26))
+        assert_array_almost_equal(fftn(x), direct_dftn(x))
+
+        x = random((5, 4, 3, 20))
+        assert_array_almost_equal(fftn(x), direct_dftn(x))
+
+    def test_axes_argument(self):
+        # plane == ji_plane, x== kji_space
+        plane1 = [[1, 2, 3],
+                  [4, 5, 6],
+                  [7, 8, 9]]
+        plane2 = [[10, 11, 12],
+                  [13, 14, 15],
+                  [16, 17, 18]]
+        plane3 = [[19, 20, 21],
+                  [22, 23, 24],
+                  [25, 26, 27]]
+        ki_plane1 = [[1, 2, 3],
+                     [10, 11, 12],
+                     [19, 20, 21]]
+        ki_plane2 = [[4, 5, 6],
+                     [13, 14, 15],
+                     [22, 23, 24]]
+        ki_plane3 = [[7, 8, 9],
+                     [16, 17, 18],
+                     [25, 26, 27]]
+        jk_plane1 = [[1, 10, 19],
+                     [4, 13, 22],
+                     [7, 16, 25]]
+        jk_plane2 = [[2, 11, 20],
+                     [5, 14, 23],
+                     [8, 17, 26]]
+        jk_plane3 = [[3, 12, 21],
+                     [6, 15, 24],
+                     [9, 18, 27]]
+        kj_plane1 = [[1, 4, 7],
+                     [10, 13, 16], [19, 22, 25]]
+        kj_plane2 = [[2, 5, 8],
+                     [11, 14, 17], [20, 23, 26]]
+        kj_plane3 = [[3, 6, 9],
+                     [12, 15, 18], [21, 24, 27]]
+        ij_plane1 = [[1, 4, 7],
+                     [2, 5, 8],
+                     [3, 6, 9]]
+        ij_plane2 = [[10, 13, 16],
+                     [11, 14, 17],
+                     [12, 15, 18]]
+        ij_plane3 = [[19, 22, 25],
+                     [20, 23, 26],
+                     [21, 24, 27]]
+        ik_plane1 = [[1, 10, 19],
+                     [2, 11, 20],
+                     [3, 12, 21]]
+        ik_plane2 = [[4, 13, 22],
+                     [5, 14, 23],
+                     [6, 15, 24]]
+        ik_plane3 = [[7, 16, 25],
+                     [8, 17, 26],
+                     [9, 18, 27]]
+        ijk_space = [jk_plane1, jk_plane2, jk_plane3]
+        ikj_space = [kj_plane1, kj_plane2, kj_plane3]
+        jik_space = [ik_plane1, ik_plane2, ik_plane3]
+        jki_space = [ki_plane1, ki_plane2, ki_plane3]
+        kij_space = [ij_plane1, ij_plane2, ij_plane3]
+        x = array([plane1, plane2, plane3])
+
+        assert_array_almost_equal(fftn(x),
+                                  fftn(x, axes=(-3, -2, -1)))  # kji_space
+        assert_array_almost_equal(fftn(x), fftn(x, axes=(0, 1, 2)))
+        assert_array_almost_equal(fftn(x, axes=(0, 2)), fftn(x, axes=(0, -1)))
+        y = fftn(x, axes=(2, 1, 0))  # ijk_space
+        assert_array_almost_equal(swapaxes(y, -1, -3), fftn(ijk_space))
+        y = fftn(x, axes=(2, 0, 1))  # ikj_space
+        assert_array_almost_equal(swapaxes(swapaxes(y, -1, -3), -1, -2),
+                                  fftn(ikj_space))
+        y = fftn(x, axes=(1, 2, 0))  # jik_space
+        assert_array_almost_equal(swapaxes(swapaxes(y, -1, -3), -3, -2),
+                                  fftn(jik_space))
+        y = fftn(x, axes=(1, 0, 2))  # jki_space
+        assert_array_almost_equal(swapaxes(y, -2, -3), fftn(jki_space))
+        y = fftn(x, axes=(0, 2, 1))  # kij_space
+        assert_array_almost_equal(swapaxes(y, -2, -1), fftn(kij_space))
+
+        y = fftn(x, axes=(-2, -1))  # ji_plane
+        assert_array_almost_equal(fftn(plane1), y[0])
+        assert_array_almost_equal(fftn(plane2), y[1])
+        assert_array_almost_equal(fftn(plane3), y[2])
+
+        y = fftn(x, axes=(1, 2))  # ji_plane
+        assert_array_almost_equal(fftn(plane1), y[0])
+        assert_array_almost_equal(fftn(plane2), y[1])
+        assert_array_almost_equal(fftn(plane3), y[2])
+
+        y = fftn(x, axes=(-3, -2))  # kj_plane
+        assert_array_almost_equal(fftn(x[:, :, 0]), y[:, :, 0])
+        assert_array_almost_equal(fftn(x[:, :, 1]), y[:, :, 1])
+        assert_array_almost_equal(fftn(x[:, :, 2]), y[:, :, 2])
+
+        y = fftn(x, axes=(-3, -1))  # ki_plane
+        assert_array_almost_equal(fftn(x[:, 0, :]), y[:, 0, :])
+        assert_array_almost_equal(fftn(x[:, 1, :]), y[:, 1, :])
+        assert_array_almost_equal(fftn(x[:, 2, :]), y[:, 2, :])
+
+        y = fftn(x, axes=(-1, -2))  # ij_plane
+        assert_array_almost_equal(fftn(ij_plane1), swapaxes(y[0], -2, -1))
+        assert_array_almost_equal(fftn(ij_plane2), swapaxes(y[1], -2, -1))
+        assert_array_almost_equal(fftn(ij_plane3), swapaxes(y[2], -2, -1))
+
+        y = fftn(x, axes=(-1, -3))  # ik_plane
+        assert_array_almost_equal(fftn(ik_plane1),
+                                  swapaxes(y[:, 0, :], -1, -2))
+        assert_array_almost_equal(fftn(ik_plane2),
+                                  swapaxes(y[:, 1, :], -1, -2))
+        assert_array_almost_equal(fftn(ik_plane3),
+                                  swapaxes(y[:, 2, :], -1, -2))
+
+        y = fftn(x, axes=(-2, -3))  # jk_plane
+        assert_array_almost_equal(fftn(jk_plane1),
+                                  swapaxes(y[:, :, 0], -1, -2))
+        assert_array_almost_equal(fftn(jk_plane2),
+                                  swapaxes(y[:, :, 1], -1, -2))
+        assert_array_almost_equal(fftn(jk_plane3),
+                                  swapaxes(y[:, :, 2], -1, -2))
+
+        y = fftn(x, axes=(-1,))  # i_line
+        for i in range(3):
+            for j in range(3):
+                assert_array_almost_equal(fft(x[i, j, :]), y[i, j, :])
+        y = fftn(x, axes=(-2,))  # j_line
+        for i in range(3):
+            for j in range(3):
+                assert_array_almost_equal(fft(x[i, :, j]), y[i, :, j])
+        y = fftn(x, axes=(0,))  # k_line
+        for i in range(3):
+            for j in range(3):
+                assert_array_almost_equal(fft(x[:, i, j]), y[:, i, j])
+
+        y = fftn(x, axes=())  # point
+        assert_array_almost_equal(y, x)
+
+    def test_shape_argument(self):
+        small_x = [[1, 2, 3],
+                   [4, 5, 6]]
+        large_x1 = [[1, 2, 3, 0],
+                    [4, 5, 6, 0],
+                    [0, 0, 0, 0],
+                    [0, 0, 0, 0]]
+
+        y = fftn(small_x, shape=(4, 4))
+        assert_array_almost_equal(y, fftn(large_x1))
+
+        y = fftn(small_x, shape=(3, 4))
+        assert_array_almost_equal(y, fftn(large_x1[:-1]))
+
+    def test_shape_axes_argument(self):
+        small_x = [[1, 2, 3],
+                   [4, 5, 6],
+                   [7, 8, 9]]
+        large_x1 = array([[1, 2, 3, 0],
+                          [4, 5, 6, 0],
+                          [7, 8, 9, 0],
+                          [0, 0, 0, 0]])
+        y = fftn(small_x, shape=(4, 4), axes=(-2, -1))
+        assert_array_almost_equal(y, fftn(large_x1))
+        y = fftn(small_x, shape=(4, 4), axes=(-1, -2))
+
+        assert_array_almost_equal(y, swapaxes(
+            fftn(swapaxes(large_x1, -1, -2)), -1, -2))
+
+    def test_shape_axes_argument2(self):
+        # Change shape of the last axis
+        x = numpy.random.random((10, 5, 3, 7))
+        y = fftn(x, axes=(-1,), shape=(8,))
+        assert_array_almost_equal(y, fft(x, axis=-1, n=8))
+
+        # Change shape of an arbitrary axis which is not the last one
+        x = numpy.random.random((10, 5, 3, 7))
+        y = fftn(x, axes=(-2,), shape=(8,))
+        assert_array_almost_equal(y, fft(x, axis=-2, n=8))
+
+        # Change shape of axes: cf #244, where shape and axes were mixed up
+        x = numpy.random.random((4, 4, 2))
+        y = fftn(x, axes=(-3, -2), shape=(8, 8))
+        assert_array_almost_equal(y,
+                                  numpy.fft.fftn(x, axes=(-3, -2), s=(8, 8)))
+
+    def test_shape_argument_more(self):
+        x = zeros((4, 4, 2))
+        with assert_raises(ValueError,
+                           match="when given, axes and shape arguments"
+                           " have to be of the same length"):
+            fftn(x, shape=(8, 8, 2, 1))
+
+    def test_invalid_sizes(self):
+        with assert_raises(ValueError,
+                           match="invalid number of data points"
+                           r" \(\[1, 0\]\) specified"):
+            fftn([[]])
+
+        with assert_raises(ValueError,
+                           match="invalid number of data points"
+                           r" \(\[4, -3\]\) specified"):
+            fftn([[1, 1], [2, 2]], (4, -3))
+
+
+class TestIfftn:
+    dtype = None
+    cdtype = None
+
+    def setup_method(self):
+        np.random.seed(1234)
+
+    @pytest.mark.parametrize('dtype,cdtype,maxnlp',
+                             [(np.float64, np.complex128, 2000),
+                              (np.float32, np.complex64, 3500)])
+    def test_definition(self, dtype, cdtype, maxnlp):
+        rng = np.random.default_rng(1234)
+        x = np.array([[1, 2, 3],
+                      [4, 5, 6],
+                      [7, 8, 9]], dtype=dtype)
+        y = ifftn(x)
+        assert_equal(y.dtype, cdtype)
+        assert_array_almost_equal_nulp(y, direct_idftn(x), maxnlp)
+
+        x = rng.random((20, 26))
+        assert_array_almost_equal_nulp(ifftn(x), direct_idftn(x), maxnlp)
+
+        x = rng.random((5, 4, 3, 20))
+        assert_array_almost_equal_nulp(ifftn(x), direct_idftn(x), maxnlp)
+
+    @pytest.mark.parametrize('maxnlp', [2000, 3500])
+    @pytest.mark.parametrize('size', [1, 2, 51, 32, 64, 92])
+    def test_random_complex(self, maxnlp, size):
+        rng = np.random.default_rng(1234)
+        x = rng.random([size, size]) + 1j * rng.random([size, size])
+        assert_array_almost_equal_nulp(ifftn(fftn(x)), x, maxnlp)
+        assert_array_almost_equal_nulp(fftn(ifftn(x)), x, maxnlp)
+
+    def test_invalid_sizes(self):
+        with assert_raises(ValueError,
+                           match="invalid number of data points"
+                           r" \(\[1, 0\]\) specified"):
+            ifftn([[]])
+
+        with assert_raises(ValueError,
+                           match="invalid number of data points"
+                           r" \(\[4, -3\]\) specified"):
+            ifftn([[1, 1], [2, 2]], (4, -3))
+
+
+class FakeArray:
+    def __init__(self, data):
+        self._data = data
+        self.__array_interface__ = data.__array_interface__
+
+
+class FakeArray2:
+    def __init__(self, data):
+        self._data = data
+
+    def __array__(self, dtype=None, copy=None):
+        return self._data
+
+
+class TestOverwrite:
+    """Check input overwrite behavior of the FFT functions."""
+
+    real_dtypes = (np.float32, np.float64)
+    dtypes = real_dtypes + (np.complex64, np.complex128)
+    fftsizes = [8, 16, 32]
+
+    def _check(self, x, routine, fftsize, axis, overwrite_x):
+        x2 = x.copy()
+        for fake in [lambda x: x, FakeArray, FakeArray2]:
+            routine(fake(x2), fftsize, axis, overwrite_x=overwrite_x)
+
+            sig = (f"{routine.__name__}({x.dtype}{x.shape!r}, {fftsize!r}, "
+                   f"axis={axis!r}, overwrite_x={overwrite_x!r})")
+            if not overwrite_x:
+                assert_equal(x2, x, err_msg=f"spurious overwrite in {sig}")
+
+    def _check_1d(self, routine, dtype, shape, axis, overwritable_dtypes,
+                  fftsize, overwrite_x):
+        np.random.seed(1234)
+        if np.issubdtype(dtype, np.complexfloating):
+            data = np.random.randn(*shape) + 1j*np.random.randn(*shape)
+        else:
+            data = np.random.randn(*shape)
+        data = data.astype(dtype)
+
+        self._check(data, routine, fftsize, axis,
+                    overwrite_x=overwrite_x)
+
+    @pytest.mark.parametrize('dtype', dtypes)
+    @pytest.mark.parametrize('fftsize', fftsizes)
+    @pytest.mark.parametrize('overwrite_x', [True, False])
+    @pytest.mark.parametrize('shape,axes', [((16,), -1),
+                                            ((16, 2), 0),
+                                            ((2, 16), 1)])
+    def test_fft_ifft(self, dtype, fftsize, overwrite_x, shape, axes):
+        overwritable = (np.complex128, np.complex64)
+        self._check_1d(fft, dtype, shape, axes, overwritable,
+                       fftsize, overwrite_x)
+        self._check_1d(ifft, dtype, shape, axes, overwritable,
+                       fftsize, overwrite_x)
+
+    @pytest.mark.parametrize('dtype', real_dtypes)
+    @pytest.mark.parametrize('fftsize', fftsizes)
+    @pytest.mark.parametrize('overwrite_x', [True, False])
+    @pytest.mark.parametrize('shape,axes', [((16,), -1),
+                                            ((16, 2), 0),
+                                            ((2, 16), 1)])
+    def test_rfft_irfft(self, dtype, fftsize, overwrite_x, shape, axes):
+        overwritable = self.real_dtypes
+        self._check_1d(irfft, dtype, shape, axes, overwritable,
+                       fftsize, overwrite_x)
+        self._check_1d(rfft, dtype, shape, axes, overwritable,
+                       fftsize, overwrite_x)
+
+    def _check_nd_one(self, routine, dtype, shape, axes, overwritable_dtypes,
+                      overwrite_x):
+        np.random.seed(1234)
+        if np.issubdtype(dtype, np.complexfloating):
+            data = np.random.randn(*shape) + 1j*np.random.randn(*shape)
+        else:
+            data = np.random.randn(*shape)
+        data = data.astype(dtype)
+
+        def fftshape_iter(shp):
+            if len(shp) <= 0:
+                yield ()
+            else:
+                for j in (shp[0]//2, shp[0], shp[0]*2):
+                    for rest in fftshape_iter(shp[1:]):
+                        yield (j,) + rest
+
+        if axes is None:
+            part_shape = shape
+        else:
+            part_shape = tuple(np.take(shape, axes))
+
+        for fftshape in fftshape_iter(part_shape):
+            self._check(data, routine, fftshape, axes,
+                        overwrite_x=overwrite_x)
+            if data.ndim > 1:
+                self._check(data.T, routine, fftshape, axes,
+                            overwrite_x=overwrite_x)
+
+    @pytest.mark.parametrize('dtype', dtypes)
+    @pytest.mark.parametrize('overwrite_x', [True, False])
+    @pytest.mark.parametrize('shape,axes', [((16,), None),
+                                            ((16,), (0,)),
+                                            ((16, 2), (0,)),
+                                            ((2, 16), (1,)),
+                                            ((8, 16), None),
+                                            ((8, 16), (0, 1)),
+                                            ((8, 16, 2), (0, 1)),
+                                            ((8, 16, 2), (1, 2)),
+                                            ((8, 16, 2), (0,)),
+                                            ((8, 16, 2), (1,)),
+                                            ((8, 16, 2), (2,)),
+                                            ((8, 16, 2), None),
+                                            ((8, 16, 2), (0, 1, 2))])
+    def test_fftn_ifftn(self, dtype, overwrite_x, shape, axes):
+        overwritable = (np.complex128, np.complex64)
+        self._check_nd_one(fftn, dtype, shape, axes, overwritable,
+                           overwrite_x)
+        self._check_nd_one(ifftn, dtype, shape, axes, overwritable,
+                           overwrite_x)
+
+
+@pytest.mark.parametrize('func', [fftn, ifftn, fft2])
+def test_shape_axes_ndarray(func):
+    # Test fftn and ifftn work with NumPy arrays for shape and axes arguments
+    # Regression test for gh-13342
+    a = np.random.rand(10, 10)
+
+    expect = func(a, shape=(5, 5))
+    actual = func(a, shape=np.array([5, 5]))
+    assert_equal(expect, actual)
+
+    expect = func(a, axes=(-1,))
+    actual = func(a, axes=np.array([-1,]))
+    assert_equal(expect, actual)
+
+    expect = func(a, shape=(4, 7), axes=(1, 0))
+    actual = func(a, shape=np.array([4, 7]), axes=np.array([1, 0]))
+    assert_equal(expect, actual)

.venv_haddock/lib/python3.12/site-packages/scipy/fftpack/tests/test_helper.py

@@ -0,0 +1,54 @@
+# Created by Pearu Peterson, September 2002
+
+__usage__ = """
+Build fftpack:
+  python setup_fftpack.py build
+Run tests if scipy is installed:
+  python -c 'import scipy;scipy.fftpack.test(<level>)'
+Run tests if fftpack is not installed:
+  python tests/test_helper.py [<level>]
+"""
+
+from numpy.testing import assert_array_almost_equal
+from scipy.fftpack import fftshift, ifftshift, fftfreq, rfftfreq
+
+from numpy import pi, random
+
+class TestFFTShift:
+
+    def test_definition(self):
+        x = [0,1,2,3,4,-4,-3,-2,-1]
+        y = [-4,-3,-2,-1,0,1,2,3,4]
+        assert_array_almost_equal(fftshift(x),y)
+        assert_array_almost_equal(ifftshift(y),x)
+        x = [0,1,2,3,4,-5,-4,-3,-2,-1]
+        y = [-5,-4,-3,-2,-1,0,1,2,3,4]
+        assert_array_almost_equal(fftshift(x),y)
+        assert_array_almost_equal(ifftshift(y),x)
+
+    def test_inverse(self):
+        for n in [1,4,9,100,211]:
+            x = random.random((n,))
+            assert_array_almost_equal(ifftshift(fftshift(x)),x)
+
+
+class TestFFTFreq:
+
+    def test_definition(self):
+        x = [0,1,2,3,4,-4,-3,-2,-1]
+        assert_array_almost_equal(9*fftfreq(9),x)
+        assert_array_almost_equal(9*pi*fftfreq(9,pi),x)
+        x = [0,1,2,3,4,-5,-4,-3,-2,-1]
+        assert_array_almost_equal(10*fftfreq(10),x)
+        assert_array_almost_equal(10*pi*fftfreq(10,pi),x)
+
+
+class TestRFFTFreq:
+
+    def test_definition(self):
+        x = [0,1,1,2,2,3,3,4,4]
+        assert_array_almost_equal(9*rfftfreq(9),x)
+        assert_array_almost_equal(9*pi*rfftfreq(9,pi),x)
+        x = [0,1,1,2,2,3,3,4,4,5]
+        assert_array_almost_equal(10*rfftfreq(10),x)
+        assert_array_almost_equal(10*pi*rfftfreq(10,pi),x)

.venv_haddock/lib/python3.12/site-packages/scipy/fftpack/tests/test_import.py

@@ -0,0 +1,33 @@
+"""Test possibility of patching fftpack with pyfftw.
+
+No module source outside of scipy.fftpack should contain an import of
+the form `from scipy.fftpack import ...`, so that a simple replacement
+of scipy.fftpack by the corresponding fftw interface completely swaps
+the two FFT implementations.
+
+Because this simply inspects source files, we only need to run the test
+on one version of Python.
+"""
+
+
+from pathlib import Path
+import re
+import tokenize
+import pytest
+from numpy.testing import assert_
+import scipy
+
+class TestFFTPackImport:
+    @pytest.mark.slow
+    def test_fftpack_import(self):
+        base = Path(scipy.__file__).parent
+        regexp = r"\s*from.+\.fftpack import .*\n"
+        for path in base.rglob("*.py"):
+            if base / "fftpack" in path.parents:
+                continue
+            # use tokenize to auto-detect encoding on systems where no
+            # default encoding is defined (e.g., LANG='C')
+            with tokenize.open(str(path)) as file:
+                assert_(all(not re.fullmatch(regexp, line)
+                            for line in file),
+                        f"{path} contains an import from fftpack")

.venv_haddock/lib/python3.12/site-packages/scipy/fftpack/tests/test_pseudo_diffs.py

@@ -0,0 +1,388 @@
+# Created by Pearu Peterson, September 2002
+
+__usage__ = """
+Build fftpack:
+  python setup_fftpack.py build
+Run tests if scipy is installed:
+  python -c 'import scipy;scipy.fftpack.test(<level>)'
+Run tests if fftpack is not installed:
+  python tests/test_pseudo_diffs.py [<level>]
+"""
+
+from numpy.testing import (assert_equal, assert_almost_equal,
+                           assert_array_almost_equal)
+from scipy.fftpack import (diff, fft, ifft, tilbert, itilbert, hilbert,
+                           ihilbert, shift, fftfreq, cs_diff, sc_diff,
+                           ss_diff, cc_diff)
+
+import numpy as np
+from numpy import arange, sin, cos, pi, exp, tanh, sum, sign
+from numpy.random import random
+
+
+def direct_diff(x,k=1,period=None):
+    fx = fft(x)
+    n = len(fx)
+    if period is None:
+        period = 2*pi
+    w = fftfreq(n)*2j*pi/period*n
+    if k < 0:
+        w = 1 / w**k
+        w[0] = 0.0
+    else:
+        w = w**k
+    if n > 2000:
+        w[250:n-250] = 0.0
+    return ifft(w*fx).real
+
+
+def direct_tilbert(x,h=1,period=None):
+    fx = fft(x)
+    n = len(fx)
+    if period is None:
+        period = 2*pi
+    w = fftfreq(n)*h*2*pi/period*n
+    w[0] = 1
+    w = 1j/tanh(w)
+    w[0] = 0j
+    return ifft(w*fx)
+
+
+def direct_itilbert(x,h=1,period=None):
+    fx = fft(x)
+    n = len(fx)
+    if period is None:
+        period = 2*pi
+    w = fftfreq(n)*h*2*pi/period*n
+    w = -1j*tanh(w)
+    return ifft(w*fx)
+
+
+def direct_hilbert(x):
+    fx = fft(x)
+    n = len(fx)
+    w = fftfreq(n)*n
+    w = 1j*sign(w)
+    return ifft(w*fx)
+
+
+def direct_ihilbert(x):
+    return -direct_hilbert(x)
+
+
+def direct_shift(x,a,period=None):
+    n = len(x)
+    if period is None:
+        k = fftfreq(n)*1j*n
+    else:
+        k = fftfreq(n)*2j*pi/period*n
+    return ifft(fft(x)*exp(k*a)).real
+
+
+class TestDiff:
+
+    def test_definition(self):
+        for n in [16,17,64,127,32]:
+            x = arange(n)*2*pi/n
+            assert_array_almost_equal(diff(sin(x)),direct_diff(sin(x)))
+            assert_array_almost_equal(diff(sin(x),2),direct_diff(sin(x),2))
+            assert_array_almost_equal(diff(sin(x),3),direct_diff(sin(x),3))
+            assert_array_almost_equal(diff(sin(x),4),direct_diff(sin(x),4))
+            assert_array_almost_equal(diff(sin(x),5),direct_diff(sin(x),5))
+            assert_array_almost_equal(diff(sin(2*x),3),direct_diff(sin(2*x),3))
+            assert_array_almost_equal(diff(sin(2*x),4),direct_diff(sin(2*x),4))
+            assert_array_almost_equal(diff(cos(x)),direct_diff(cos(x)))
+            assert_array_almost_equal(diff(cos(x),2),direct_diff(cos(x),2))
+            assert_array_almost_equal(diff(cos(x),3),direct_diff(cos(x),3))
+            assert_array_almost_equal(diff(cos(x),4),direct_diff(cos(x),4))
+            assert_array_almost_equal(diff(cos(2*x)),direct_diff(cos(2*x)))
+            assert_array_almost_equal(diff(sin(x*n/8)),direct_diff(sin(x*n/8)))
+            assert_array_almost_equal(diff(cos(x*n/8)),direct_diff(cos(x*n/8)))
+            for k in range(5):
+                assert_array_almost_equal(diff(sin(4*x),k),direct_diff(sin(4*x),k))
+                assert_array_almost_equal(diff(cos(4*x),k),direct_diff(cos(4*x),k))
+
+    def test_period(self):
+        for n in [17,64]:
+            x = arange(n)/float(n)
+            assert_array_almost_equal(diff(sin(2*pi*x),period=1),
+                                      2*pi*cos(2*pi*x))
+            assert_array_almost_equal(diff(sin(2*pi*x),3,period=1),
+                                      -(2*pi)**3*cos(2*pi*x))
+
+    def test_sin(self):
+        for n in [32,64,77]:
+            x = arange(n)*2*pi/n
+            assert_array_almost_equal(diff(sin(x)),cos(x))
+            assert_array_almost_equal(diff(cos(x)),-sin(x))
+            assert_array_almost_equal(diff(sin(x),2),-sin(x))
+            assert_array_almost_equal(diff(sin(x),4),sin(x))
+            assert_array_almost_equal(diff(sin(4*x)),4*cos(4*x))
+            assert_array_almost_equal(diff(sin(sin(x))),cos(x)*cos(sin(x)))
+
+    def test_expr(self):
+        for n in [64,77,100,128,256,512,1024,2048,4096,8192][:5]:
+            x = arange(n)*2*pi/n
+            f = sin(x)*cos(4*x)+exp(sin(3*x))
+            df = cos(x)*cos(4*x)-4*sin(x)*sin(4*x)+3*cos(3*x)*exp(sin(3*x))
+            ddf = -17*sin(x)*cos(4*x)-8*cos(x)*sin(4*x)\
+                 - 9*sin(3*x)*exp(sin(3*x))+9*cos(3*x)**2*exp(sin(3*x))
+            d1 = diff(f)
+            assert_array_almost_equal(d1,df)
+            assert_array_almost_equal(diff(df),ddf)
+            assert_array_almost_equal(diff(f,2),ddf)
+            assert_array_almost_equal(diff(ddf,-1),df)
+
+    def test_expr_large(self):
+        for n in [2048,4096]:
+            x = arange(n)*2*pi/n
+            f = sin(x)*cos(4*x)+exp(sin(3*x))
+            df = cos(x)*cos(4*x)-4*sin(x)*sin(4*x)+3*cos(3*x)*exp(sin(3*x))
+            ddf = -17*sin(x)*cos(4*x)-8*cos(x)*sin(4*x)\
+                 - 9*sin(3*x)*exp(sin(3*x))+9*cos(3*x)**2*exp(sin(3*x))
+            assert_array_almost_equal(diff(f),df)
+            assert_array_almost_equal(diff(df),ddf)
+            assert_array_almost_equal(diff(ddf,-1),df)
+            assert_array_almost_equal(diff(f,2),ddf)
+
+    def test_int(self):
+        n = 64
+        x = arange(n)*2*pi/n
+        assert_array_almost_equal(diff(sin(x),-1),-cos(x))
+        assert_array_almost_equal(diff(sin(x),-2),-sin(x))
+        assert_array_almost_equal(diff(sin(x),-4),sin(x))
+        assert_array_almost_equal(diff(2*cos(2*x),-1),sin(2*x))
+
+    def test_random_even(self):
+        rng = np.random.default_rng(1234)
+        for k in [0,2,4,6]:
+            for n in [60,32,64,56,55]:
+                f = rng.random((n,))
+                af = sum(f,axis=0)/n
+                f = f-af
+                # zeroing Nyquist mode:
+                f = diff(diff(f,1),-1)
+                assert_almost_equal(sum(f,axis=0),0.0)
+                assert_array_almost_equal(diff(diff(f,k),-k),f)
+                assert_array_almost_equal(diff(diff(f,-k),k),f)
+
+    def test_random_odd(self):
+        rng = np.random.default_rng(1234)
+        for k in [0,1,2,3,4,5,6]:
+            for n in [33,65,55]:
+                f = rng.random((n,))
+                af = sum(f,axis=0)/n
+                f = f-af
+                assert_almost_equal(sum(f,axis=0),0.0)
+                assert_array_almost_equal(diff(diff(f,k),-k),f)
+                assert_array_almost_equal(diff(diff(f,-k),k),f)
+
+    def test_zero_nyquist(self):
+        rng = np.random.default_rng(1234)
+        for k in [0,1,2,3,4,5,6]:
+            for n in [32,33,64,56,55]:
+                f = rng.random((n,))
+                af = sum(f,axis=0)/n
+                f = f-af
+                # zeroing Nyquist mode:
+                f = diff(diff(f,1),-1)
+                assert_almost_equal(sum(f,axis=0),0.0)
+                assert_array_almost_equal(diff(diff(f,k),-k),f)
+                assert_array_almost_equal(diff(diff(f,-k),k),f)
+
+
+class TestTilbert:
+
+    def test_definition(self):
+        for h in [0.1,0.5,1,5.5,10]:
+            for n in [16,17,64,127]:
+                x = arange(n)*2*pi/n
+                y = tilbert(sin(x),h)
+                y1 = direct_tilbert(sin(x),h)
+                assert_array_almost_equal(y,y1)
+                assert_array_almost_equal(tilbert(sin(x),h),
+                                          direct_tilbert(sin(x),h))
+                assert_array_almost_equal(tilbert(sin(2*x),h),
+                                          direct_tilbert(sin(2*x),h))
+
+    def test_random_even(self):
+        for h in [0.1,0.5,1,5.5,10]:
+            for n in [32,64,56]:
+                f = random((n,))
+                af = sum(f,axis=0)/n
+                f = f-af
+                assert_almost_equal(sum(f,axis=0),0.0)
+                assert_array_almost_equal(direct_tilbert(direct_itilbert(f,h),h),f)
+
+    def test_random_odd(self):
+        rng = np.random.default_rng(1234)
+        for h in [0.1,0.5,1,5.5,10]:
+            for n in [33,65,55]:
+                f = rng.random((n,))
+                af = sum(f,axis=0)/n
+                f = f-af
+                assert_almost_equal(sum(f,axis=0),0.0)
+                assert_array_almost_equal(itilbert(tilbert(f,h),h),f)
+                assert_array_almost_equal(tilbert(itilbert(f,h),h),f)
+
+
+class TestITilbert:
+
+    def test_definition(self):
+        for h in [0.1,0.5,1,5.5,10]:
+            for n in [16,17,64,127]:
+                x = arange(n)*2*pi/n
+                y = itilbert(sin(x),h)
+                y1 = direct_itilbert(sin(x),h)
+                assert_array_almost_equal(y,y1)
+                assert_array_almost_equal(itilbert(sin(x),h),
+                                          direct_itilbert(sin(x),h))
+                assert_array_almost_equal(itilbert(sin(2*x),h),
+                                          direct_itilbert(sin(2*x),h))
+
+
+class TestHilbert:
+
+    def test_definition(self):
+        for n in [16,17,64,127]:
+            x = arange(n)*2*pi/n
+            y = hilbert(sin(x))
+            y1 = direct_hilbert(sin(x))
+            assert_array_almost_equal(y,y1)
+            assert_array_almost_equal(hilbert(sin(2*x)),
+                                      direct_hilbert(sin(2*x)))
+
+    def test_tilbert_relation(self):
+        for n in [16,17,64,127]:
+            x = arange(n)*2*pi/n
+            f = sin(x)+cos(2*x)*sin(x)
+            y = hilbert(f)
+            y1 = direct_hilbert(f)
+            assert_array_almost_equal(y,y1)
+            y2 = tilbert(f,h=10)
+            assert_array_almost_equal(y,y2)
+
+    def test_random_odd(self):
+        rng = np.random.default_rng(1234)
+        for n in [33,65,55]:
+            f = rng.random((n,))
+            af = sum(f,axis=0)/n
+            f = f-af
+            assert_almost_equal(sum(f,axis=0),0.0)
+            assert_array_almost_equal(ihilbert(hilbert(f)),f)
+            assert_array_almost_equal(hilbert(ihilbert(f)),f)
+
+    def test_random_even(self):
+        rng = np.random.default_rng(1234)
+        for n in [32,64,56]:
+            f = rng.random((n,))
+            af = sum(f,axis=0)/n
+            f = f-af
+            # zeroing Nyquist mode:
+            f = diff(diff(f,1),-1)
+            assert_almost_equal(sum(f,axis=0),0.0)
+            assert_array_almost_equal(direct_hilbert(direct_ihilbert(f)),f)
+            assert_array_almost_equal(hilbert(ihilbert(f)),f)
+
+
+class TestIHilbert:
+
+    def test_definition(self):
+        for n in [16,17,64,127]:
+            x = arange(n)*2*pi/n
+            y = ihilbert(sin(x))
+            y1 = direct_ihilbert(sin(x))
+            assert_array_almost_equal(y,y1)
+            assert_array_almost_equal(ihilbert(sin(2*x)),
+                                      direct_ihilbert(sin(2*x)))
+
+    def test_itilbert_relation(self):
+        for n in [16,17,64,127]:
+            x = arange(n)*2*pi/n
+            f = sin(x)+cos(2*x)*sin(x)
+            y = ihilbert(f)
+            y1 = direct_ihilbert(f)
+            assert_array_almost_equal(y,y1)
+            y2 = itilbert(f,h=10)
+            assert_array_almost_equal(y,y2)
+
+
+class TestShift:
+
+    def test_definition(self):
+        for n in [18,17,64,127,32,2048,256]:
+            x = arange(n)*2*pi/n
+            for a in [0.1,3]:
+                assert_array_almost_equal(shift(sin(x),a),direct_shift(sin(x),a))
+                assert_array_almost_equal(shift(sin(x),a),sin(x+a))
+                assert_array_almost_equal(shift(cos(x),a),cos(x+a))
+                assert_array_almost_equal(shift(cos(2*x)+sin(x),a),
+                                          cos(2*(x+a))+sin(x+a))
+                assert_array_almost_equal(shift(exp(sin(x)),a),exp(sin(x+a)))
+            assert_array_almost_equal(shift(sin(x),2*pi),sin(x))
+            assert_array_almost_equal(shift(sin(x),pi),-sin(x))
+            assert_array_almost_equal(shift(sin(x),pi/2),cos(x))
+
+
+class TestOverwrite:
+    """Check input overwrite behavior """
+
+    real_dtypes = (np.float32, np.float64)
+    dtypes = real_dtypes + (np.complex64, np.complex128)
+
+    def _check(self, x, routine, *args, **kwargs):
+        x2 = x.copy()
+        routine(x2, *args, **kwargs)
+        sig = routine.__name__
+        if args:
+            sig += repr(args)
+        if kwargs:
+            sig += repr(kwargs)
+        assert_equal(x2, x, err_msg=f"spurious overwrite in {sig}")
+
+    def _check_1d(self, routine, dtype, shape, *args, **kwargs):
+        # rng = np.random.default_rng(1234)
+        rng = np.random.RandomState(1234)
+        # np.random.seed(1234)
+        if np.issubdtype(dtype, np.complexfloating):
+            data = rng.randn(*shape) + 1j*rng.randn(*shape)
+        else:
+            data = rng.randn(*shape)
+        data = data.astype(dtype)
+        self._check(data, routine, *args, **kwargs)
+
+    def test_diff(self):
+        for dtype in self.dtypes:
+            self._check_1d(diff, dtype, (16,))
+
+    def test_tilbert(self):
+        for dtype in self.dtypes:
+            self._check_1d(tilbert, dtype, (16,), 1.6)
+
+    def test_itilbert(self):
+        for dtype in self.dtypes:
+            self._check_1d(itilbert, dtype, (16,), 1.6)
+
+    def test_hilbert(self):
+        for dtype in self.dtypes:
+            self._check_1d(hilbert, dtype, (16,))
+
+    def test_cs_diff(self):
+        for dtype in self.dtypes:
+            self._check_1d(cs_diff, dtype, (16,), 1.0, 4.0)
+
+    def test_sc_diff(self):
+        for dtype in self.dtypes:
+            self._check_1d(sc_diff, dtype, (16,), 1.0, 4.0)
+
+    def test_ss_diff(self):
+        for dtype in self.dtypes:
+            self._check_1d(ss_diff, dtype, (16,), 1.0, 4.0)
+
+    def test_cc_diff(self):
+        for dtype in self.dtypes:
+            self._check_1d(cc_diff, dtype, (16,), 1.0, 4.0)
+
+    def test_shift(self):
+        for dtype in self.dtypes:
+            self._check_1d(shift, dtype, (16,), 1.0)

.venv_haddock/lib/python3.12/site-packages/scipy/fftpack/tests/test_real_transforms.py

@@ -0,0 +1,836 @@
+from os.path import join, dirname
+import threading
+
+import numpy as np
+from numpy.testing import assert_array_almost_equal, assert_equal
+import pytest
+from pytest import raises as assert_raises
+
+from scipy.fftpack._realtransforms import (
+    dct, idct, dst, idst, dctn, idctn, dstn, idstn)
+
+# Matlab reference data
+MDATA = np.load(join(dirname(__file__), 'test.npz'))
+X = [MDATA[f'x{i}'] for i in range(8)]
+Y = [MDATA[f'y{i}'] for i in range(8)]
+
+# FFTW reference data: the data are organized as follows:
+#    * SIZES is an array containing all available sizes
+#    * for every type (1, 2, 3, 4) and every size, the array dct_type_size
+#    contains the output of the DCT applied to the input np.linspace(0, size-1,
+#    size)
+FFTWDATA_DOUBLE = np.load(join(dirname(__file__), 'fftw_double_ref.npz'))
+FFTWDATA_SINGLE = np.load(join(dirname(__file__), 'fftw_single_ref.npz'))
+FFTWDATA_SIZES = FFTWDATA_DOUBLE['sizes']
+
+
+def fftw_dct_ref(type, size, dt):
+    x = np.linspace(0, size-1, size).astype(dt)
+    dt = np.result_type(np.float32, dt)
+    if dt == np.float64:
+        data = FFTWDATA_DOUBLE
+    elif dt == np.float32:
+        data = FFTWDATA_SINGLE
+    else:
+        raise ValueError()
+    y = (data[f'dct_{type}_{size}']).astype(dt)
+    return x, y, dt
+
+
+def fftw_dst_ref(type, size, dt):
+    x = np.linspace(0, size-1, size).astype(dt)
+    dt = np.result_type(np.float32, dt)
+    if dt == np.float64:
+        data = FFTWDATA_DOUBLE
+    elif dt == np.float32:
+        data = FFTWDATA_SINGLE
+    else:
+        raise ValueError()
+    y = (data[f'dst_{type}_{size}']).astype(dt)
+    return x, y, dt
+
+
+def dct_2d_ref(x, **kwargs):
+    """Calculate reference values for testing dct2."""
+    x = np.array(x, copy=True)
+    for row in range(x.shape[0]):
+        x[row, :] = dct(x[row, :], **kwargs)
+    for col in range(x.shape[1]):
+        x[:, col] = dct(x[:, col], **kwargs)
+    return x
+
+
+def idct_2d_ref(x, **kwargs):
+    """Calculate reference values for testing idct2."""
+    x = np.array(x, copy=True)
+    for row in range(x.shape[0]):
+        x[row, :] = idct(x[row, :], **kwargs)
+    for col in range(x.shape[1]):
+        x[:, col] = idct(x[:, col], **kwargs)
+    return x
+
+
+def dst_2d_ref(x, **kwargs):
+    """Calculate reference values for testing dst2."""
+    x = np.array(x, copy=True)
+    for row in range(x.shape[0]):
+        x[row, :] = dst(x[row, :], **kwargs)
+    for col in range(x.shape[1]):
+        x[:, col] = dst(x[:, col], **kwargs)
+    return x
+
+
+def idst_2d_ref(x, **kwargs):
+    """Calculate reference values for testing idst2."""
+    x = np.array(x, copy=True)
+    for row in range(x.shape[0]):
+        x[row, :] = idst(x[row, :], **kwargs)
+    for col in range(x.shape[1]):
+        x[:, col] = idst(x[:, col], **kwargs)
+    return x
+
+
+def naive_dct1(x, norm=None):
+    """Calculate textbook definition version of DCT-I."""
+    x = np.array(x, copy=True)
+    N = len(x)
+    M = N-1
+    y = np.zeros(N)
+    m0, m = 1, 2
+    if norm == 'ortho':
+        m0 = np.sqrt(1.0/M)
+        m = np.sqrt(2.0/M)
+    for k in range(N):
+        for n in range(1, N-1):
+            y[k] += m*x[n]*np.cos(np.pi*n*k/M)
+        y[k] += m0 * x[0]
+        y[k] += m0 * x[N-1] * (1 if k % 2 == 0 else -1)
+    if norm == 'ortho':
+        y[0] *= 1/np.sqrt(2)
+        y[N-1] *= 1/np.sqrt(2)
+    return y
+
+
+def naive_dst1(x, norm=None):
+    """Calculate textbook definition version  of DST-I."""
+    x = np.array(x, copy=True)
+    N = len(x)
+    M = N+1
+    y = np.zeros(N)
+    for k in range(N):
+        for n in range(N):
+            y[k] += 2*x[n]*np.sin(np.pi*(n+1.0)*(k+1.0)/M)
+    if norm == 'ortho':
+        y *= np.sqrt(0.5/M)
+    return y
+
+
+def naive_dct4(x, norm=None):
+    """Calculate textbook definition version of DCT-IV."""
+    x = np.array(x, copy=True)
+    N = len(x)
+    y = np.zeros(N)
+    for k in range(N):
+        for n in range(N):
+            y[k] += x[n]*np.cos(np.pi*(n+0.5)*(k+0.5)/(N))
+    if norm == 'ortho':
+        y *= np.sqrt(2.0/N)
+    else:
+        y *= 2
+    return y
+
+
+def naive_dst4(x, norm=None):
+    """Calculate textbook definition version of DST-IV."""
+    x = np.array(x, copy=True)
+    N = len(x)
+    y = np.zeros(N)
+    for k in range(N):
+        for n in range(N):
+            y[k] += x[n]*np.sin(np.pi*(n+0.5)*(k+0.5)/(N))
+    if norm == 'ortho':
+        y *= np.sqrt(2.0/N)
+    else:
+        y *= 2
+    return y
+
+
+class TestComplex:
+    def test_dct_complex64(self):
+        y = dct(1j*np.arange(5, dtype=np.complex64))
+        x = 1j*dct(np.arange(5))
+        assert_array_almost_equal(x, y)
+
+    def test_dct_complex(self):
+        y = dct(np.arange(5)*1j)
+        x = 1j*dct(np.arange(5))
+        assert_array_almost_equal(x, y)
+
+    def test_idct_complex(self):
+        y = idct(np.arange(5)*1j)
+        x = 1j*idct(np.arange(5))
+        assert_array_almost_equal(x, y)
+
+    def test_dst_complex64(self):
+        y = dst(np.arange(5, dtype=np.complex64)*1j)
+        x = 1j*dst(np.arange(5))
+        assert_array_almost_equal(x, y)
+
+    def test_dst_complex(self):
+        y = dst(np.arange(5)*1j)
+        x = 1j*dst(np.arange(5))
+        assert_array_almost_equal(x, y)
+
+    def test_idst_complex(self):
+        y = idst(np.arange(5)*1j)
+        x = 1j*idst(np.arange(5))
+        assert_array_almost_equal(x, y)
+
+
+class _TestDCTBase:
+    def setup_method(self):
+        self.rdt = None
+        self.dec = 14
+        self.type = None
+
+    @pytest.fixture
+    def dct_lock(self):
+        return threading.Lock()
+
+    def test_definition(self, dct_lock):
+        for i in FFTWDATA_SIZES:
+            with dct_lock:
+                x, yr, dt = fftw_dct_ref(self.type, i, self.rdt)
+            y = dct(x, type=self.type)
+            assert_equal(y.dtype, dt)
+            # XXX: we divide by np.max(y) because the tests fail otherwise. We
+            # should really use something like assert_array_approx_equal. The
+            # difference is due to fftw using a better algorithm w.r.t error
+            # propagation compared to the ones from fftpack.
+            assert_array_almost_equal(y / np.max(y), yr / np.max(y), decimal=self.dec,
+                    err_msg=f"Size {i} failed")
+
+    def test_axis(self):
+        nt = 2
+        rng = np.random.RandomState(1234)
+        for i in [7, 8, 9, 16, 32, 64]:
+            x = rng.randn(nt, i)
+            y = dct(x, type=self.type)
+            for j in range(nt):
+                assert_array_almost_equal(y[j], dct(x[j], type=self.type),
+                        decimal=self.dec)
+
+            x = x.T
+            y = dct(x, axis=0, type=self.type)
+            for j in range(nt):
+                assert_array_almost_equal(y[:,j], dct(x[:,j], type=self.type),
+                        decimal=self.dec)
+
+
+class _TestDCTIBase(_TestDCTBase):
+    def test_definition_ortho(self):
+        # Test orthornomal mode.
+        dt = np.result_type(np.float32, self.rdt)
+        for xr in X:
+            x = np.array(xr, dtype=self.rdt)
+            y = dct(x, norm='ortho', type=1)
+            y2 = naive_dct1(x, norm='ortho')
+            assert_equal(y.dtype, dt)
+            assert_array_almost_equal(y / np.max(y), y2 / np.max(y), decimal=self.dec)
+
+class _TestDCTIIBase(_TestDCTBase):
+    def test_definition_matlab(self):
+        # Test correspondence with MATLAB (orthornomal mode).
+        dt = np.result_type(np.float32, self.rdt)
+        for xr, yr in zip(X, Y):
+            x = np.array(xr, dtype=dt)
+            y = dct(x, norm="ortho", type=2)
+            assert_equal(y.dtype, dt)
+            assert_array_almost_equal(y, yr, decimal=self.dec)
+
+
+class _TestDCTIIIBase(_TestDCTBase):
+    def test_definition_ortho(self):
+        # Test orthornomal mode.
+        dt = np.result_type(np.float32, self.rdt)
+        for xr in X:
+            x = np.array(xr, dtype=self.rdt)
+            y = dct(x, norm='ortho', type=2)
+            xi = dct(y, norm="ortho", type=3)
+            assert_equal(xi.dtype, dt)
+            assert_array_almost_equal(xi, x, decimal=self.dec)
+
+class _TestDCTIVBase(_TestDCTBase):
+    def test_definition_ortho(self):
+        # Test orthornomal mode.
+        dt = np.result_type(np.float32, self.rdt)
+        for xr in X:
+            x = np.array(xr, dtype=self.rdt)
+            y = dct(x, norm='ortho', type=4)
+            y2 = naive_dct4(x, norm='ortho')
+            assert_equal(y.dtype, dt)
+            assert_array_almost_equal(y / np.max(y), y2 / np.max(y), decimal=self.dec)
+
+
+class TestDCTIDouble(_TestDCTIBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 10
+        self.type = 1
+
+
+class TestDCTIFloat(_TestDCTIBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 4
+        self.type = 1
+
+
+class TestDCTIInt(_TestDCTIBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 5
+        self.type = 1
+
+
+class TestDCTIIDouble(_TestDCTIIBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 10
+        self.type = 2
+
+
+class TestDCTIIFloat(_TestDCTIIBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 5
+        self.type = 2
+
+
+class TestDCTIIInt(_TestDCTIIBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 5
+        self.type = 2
+
+
+class TestDCTIIIDouble(_TestDCTIIIBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 14
+        self.type = 3
+
+
+class TestDCTIIIFloat(_TestDCTIIIBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 5
+        self.type = 3
+
+
+class TestDCTIIIInt(_TestDCTIIIBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 5
+        self.type = 3
+
+
+class TestDCTIVDouble(_TestDCTIVBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 12
+        self.type = 3
+
+
+class TestDCTIVFloat(_TestDCTIVBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 5
+        self.type = 3
+
+
+class TestDCTIVInt(_TestDCTIVBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 5
+        self.type = 3
+
+
+class _TestIDCTBase:
+    def setup_method(self):
+        self.rdt = None
+        self.dec = 14
+        self.type = None
+
+    @pytest.fixture
+    def idct_lock(self):
+        return threading.Lock()
+
+    def test_definition(self, idct_lock):
+        for i in FFTWDATA_SIZES:
+            with idct_lock:
+                xr, yr, dt = fftw_dct_ref(self.type, i, self.rdt)
+            x = idct(yr, type=self.type)
+            if self.type == 1:
+                x /= 2 * (i-1)
+            else:
+                x /= 2 * i
+            assert_equal(x.dtype, dt)
+            # XXX: we divide by np.max(y) because the tests fail otherwise. We
+            # should really use something like assert_array_approx_equal. The
+            # difference is due to fftw using a better algorithm w.r.t error
+            # propagation compared to the ones from fftpack.
+            assert_array_almost_equal(x / np.max(x), xr / np.max(x), decimal=self.dec,
+                    err_msg=f"Size {i} failed")
+
+class TestIDCTIDouble(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 10
+        self.type = 1
+
+
+class TestIDCTIFloat(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 4
+        self.type = 1
+
+
+class TestIDCTIInt(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 4
+        self.type = 1
+
+
+class TestIDCTIIDouble(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 10
+        self.type = 2
+
+
+class TestIDCTIIFloat(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 5
+        self.type = 2
+
+
+class TestIDCTIIInt(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 5
+        self.type = 2
+
+
+class TestIDCTIIIDouble(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 14
+        self.type = 3
+
+
+class TestIDCTIIIFloat(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 5
+        self.type = 3
+
+
+class TestIDCTIIIInt(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 5
+        self.type = 3
+
+class TestIDCTIVDouble(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 12
+        self.type = 4
+
+
+class TestIDCTIVFloat(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 5
+        self.type = 4
+
+
+class TestIDCTIVInt(_TestIDCTBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 5
+        self.type = 4
+
+class _TestDSTBase:
+    def setup_method(self):
+        self.rdt = None  # dtype
+        self.dec = None  # number of decimals to match
+        self.type = None  # dst type
+
+    @pytest.fixture
+    def dst_lock(self):
+        return threading.Lock()
+
+    def test_definition(self, dst_lock):
+        for i in FFTWDATA_SIZES:
+            with dst_lock:
+                xr, yr, dt = fftw_dst_ref(self.type, i, self.rdt)
+            y = dst(xr, type=self.type)
+            assert_equal(y.dtype, dt)
+            # XXX: we divide by np.max(y) because the tests fail otherwise. We
+            # should really use something like assert_array_approx_equal. The
+            # difference is due to fftw using a better algorithm w.r.t error
+            # propagation compared to the ones from fftpack.
+            assert_array_almost_equal(y / np.max(y), yr / np.max(y), decimal=self.dec,
+                    err_msg=f"Size {i} failed")
+
+
+class _TestDSTIBase(_TestDSTBase):
+    def test_definition_ortho(self):
+        # Test orthornomal mode.
+        dt = np.result_type(np.float32, self.rdt)
+        for xr in X:
+            x = np.array(xr, dtype=self.rdt)
+            y = dst(x, norm='ortho', type=1)
+            y2 = naive_dst1(x, norm='ortho')
+            assert_equal(y.dtype, dt)
+            assert_array_almost_equal(y / np.max(y), y2 / np.max(y), decimal=self.dec)
+
+class _TestDSTIVBase(_TestDSTBase):
+    def test_definition_ortho(self):
+        # Test orthornomal mode.
+        dt = np.result_type(np.float32, self.rdt)
+        for xr in X:
+            x = np.array(xr, dtype=self.rdt)
+            y = dst(x, norm='ortho', type=4)
+            y2 = naive_dst4(x, norm='ortho')
+            assert_equal(y.dtype, dt)
+            assert_array_almost_equal(y, y2, decimal=self.dec)
+
+class TestDSTIDouble(_TestDSTIBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 12
+        self.type = 1
+
+
+class TestDSTIFloat(_TestDSTIBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 4
+        self.type = 1
+
+
+class TestDSTIInt(_TestDSTIBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 5
+        self.type = 1
+
+
+class TestDSTIIDouble(_TestDSTBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 14
+        self.type = 2
+
+
+class TestDSTIIFloat(_TestDSTBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 6
+        self.type = 2
+
+
+class TestDSTIIInt(_TestDSTBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 6
+        self.type = 2
+
+
+class TestDSTIIIDouble(_TestDSTBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 14
+        self.type = 3
+
+
+class TestDSTIIIFloat(_TestDSTBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 7
+        self.type = 3
+
+
+class TestDSTIIIInt(_TestDSTBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 7
+        self.type = 3
+
+
+class TestDSTIVDouble(_TestDSTIVBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 12
+        self.type = 4
+
+
+class TestDSTIVFloat(_TestDSTIVBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 4
+        self.type = 4
+
+
+class TestDSTIVInt(_TestDSTIVBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 5
+        self.type = 4
+
+
+class _TestIDSTBase:
+    def setup_method(self):
+        self.rdt = None
+        self.dec = None
+        self.type = None
+
+    @pytest.fixture
+    def idst_lock(self):
+        return threading.Lock()
+
+    def test_definition(self, idst_lock):
+        for i in FFTWDATA_SIZES:
+            with idst_lock:
+                xr, yr, dt = fftw_dst_ref(self.type, i, self.rdt)
+            x = idst(yr, type=self.type)
+            if self.type == 1:
+                x /= 2 * (i+1)
+            else:
+                x /= 2 * i
+            assert_equal(x.dtype, dt)
+            # XXX: we divide by np.max(x) because the tests fail otherwise. We
+            # should really use something like assert_array_approx_equal. The
+            # difference is due to fftw using a better algorithm w.r.t error
+            # propagation compared to the ones from fftpack.
+            assert_array_almost_equal(x / np.max(x), xr / np.max(x), decimal=self.dec,
+                    err_msg=f"Size {i} failed")
+
+
+class TestIDSTIDouble(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 12
+        self.type = 1
+
+
+class TestIDSTIFloat(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 4
+        self.type = 1
+
+
+class TestIDSTIInt(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 4
+        self.type = 1
+
+
+class TestIDSTIIDouble(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 14
+        self.type = 2
+
+
+class TestIDSTIIFloat(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 6
+        self.type = 2
+
+
+class TestIDSTIIInt(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 6
+        self.type = 2
+
+
+class TestIDSTIIIDouble(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 14
+        self.type = 3
+
+
+class TestIDSTIIIFloat(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 6
+        self.type = 3
+
+
+class TestIDSTIIIInt(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 6
+        self.type = 3
+
+
+class TestIDSTIVDouble(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = np.float64
+        self.dec = 12
+        self.type = 4
+
+
+class TestIDSTIVFloat(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = np.float32
+        self.dec = 6
+        self.type = 4
+
+
+class TestIDSTIVnt(_TestIDSTBase):
+    def setup_method(self):
+        self.rdt = int
+        self.dec = 6
+        self.type = 4
+
+
+class TestOverwrite:
+    """Check input overwrite behavior."""
+
+    real_dtypes = [np.float32, np.float64]
+
+    def _check(self, x, routine, type, fftsize, axis, norm, overwrite_x, **kw):
+        x2 = x.copy()
+        routine(x2, type, fftsize, axis, norm, overwrite_x=overwrite_x)
+
+        sig = (f"{routine.__name__}({x.dtype}{x.shape!r}, {fftsize!r}, "
+               f"axis={axis!r}, overwrite_x={overwrite_x!r})")
+        if not overwrite_x:
+            assert_equal(x2, x, err_msg=f"spurious overwrite in {sig}")
+
+    def _check_1d(self, routine, dtype, shape, axis):
+        rng = np.random.RandomState(1234)
+        if np.issubdtype(dtype, np.complexfloating):
+            data = rng.randn(*shape) + 1j*rng.randn(*shape)
+        else:
+            data = rng.randn(*shape)
+        data = data.astype(dtype)
+
+        for type in [1, 2, 3, 4]:
+            for overwrite_x in [True, False]:
+                for norm in [None, 'ortho']:
+                    self._check(data, routine, type, None, axis, norm,
+                                overwrite_x)
+
+    def test_dct(self):
+        for dtype in self.real_dtypes:
+            self._check_1d(dct, dtype, (16,), -1)
+            self._check_1d(dct, dtype, (16, 2), 0)
+            self._check_1d(dct, dtype, (2, 16), 1)
+
+    def test_idct(self):
+        for dtype in self.real_dtypes:
+            self._check_1d(idct, dtype, (16,), -1)
+            self._check_1d(idct, dtype, (16, 2), 0)
+            self._check_1d(idct, dtype, (2, 16), 1)
+
+    def test_dst(self):
+        for dtype in self.real_dtypes:
+            self._check_1d(dst, dtype, (16,), -1)
+            self._check_1d(dst, dtype, (16, 2), 0)
+            self._check_1d(dst, dtype, (2, 16), 1)
+
+    def test_idst(self):
+        for dtype in self.real_dtypes:
+            self._check_1d(idst, dtype, (16,), -1)
+            self._check_1d(idst, dtype, (16, 2), 0)
+            self._check_1d(idst, dtype, (2, 16), 1)
+
+
+class Test_DCTN_IDCTN:
+    dec = 14
+    dct_type = [1, 2, 3, 4]
+    norms = [None, 'ortho']
+    rstate = np.random.RandomState(1234)
+    shape = (32, 16)
+    data = rstate.randn(*shape)
+
+    @pytest.mark.parametrize('fforward,finverse', [(dctn, idctn),
+                                                   (dstn, idstn)])
+    @pytest.mark.parametrize('axes', [None,
+                                      1, (1,), [1],
+                                      0, (0,), [0],
+                                      (0, 1), [0, 1],
+                                      (-2, -1), [-2, -1]])
+    @pytest.mark.parametrize('dct_type', dct_type)
+    @pytest.mark.parametrize('norm', ['ortho'])
+    def test_axes_round_trip(self, fforward, finverse, axes, dct_type, norm):
+        tmp = fforward(self.data, type=dct_type, axes=axes, norm=norm)
+        tmp = finverse(tmp, type=dct_type, axes=axes, norm=norm)
+        assert_array_almost_equal(self.data, tmp, decimal=12)
+
+    @pytest.mark.parametrize('fforward,fforward_ref', [(dctn, dct_2d_ref),
+                                                       (dstn, dst_2d_ref)])
+    @pytest.mark.parametrize('dct_type', dct_type)
+    @pytest.mark.parametrize('norm', norms)
+    def test_dctn_vs_2d_reference(self, fforward, fforward_ref,
+                                  dct_type, norm):
+        y1 = fforward(self.data, type=dct_type, axes=None, norm=norm)
+        y2 = fforward_ref(self.data, type=dct_type, norm=norm)
+        assert_array_almost_equal(y1, y2, decimal=11)
+
+    @pytest.mark.parametrize('finverse,finverse_ref', [(idctn, idct_2d_ref),
+                                                       (idstn, idst_2d_ref)])
+    @pytest.mark.parametrize('dct_type', dct_type)
+    @pytest.mark.parametrize('norm', [None, 'ortho'])
+    def test_idctn_vs_2d_reference(self, finverse, finverse_ref,
+                                   dct_type, norm):
+        fdata = dctn(self.data, type=dct_type, norm=norm)
+        y1 = finverse(fdata, type=dct_type, norm=norm)
+        y2 = finverse_ref(fdata, type=dct_type, norm=norm)
+        assert_array_almost_equal(y1, y2, decimal=11)
+
+    @pytest.mark.parametrize('fforward,finverse', [(dctn, idctn),
+                                                   (dstn, idstn)])
+    def test_axes_and_shape(self, fforward, finverse):
+        with assert_raises(ValueError,
+                           match="when given, axes and shape arguments"
+                           " have to be of the same length"):
+            fforward(self.data, shape=self.data.shape[0], axes=(0, 1))
+
+        with assert_raises(ValueError,
+                           match="when given, axes and shape arguments"
+                           " have to be of the same length"):
+            fforward(self.data, shape=self.data.shape[0], axes=None)
+
+        with assert_raises(ValueError,
+                           match="when given, axes and shape arguments"
+                           " have to be of the same length"):
+            fforward(self.data, shape=self.data.shape, axes=0)
+
+    @pytest.mark.parametrize('fforward', [dctn, dstn])
+    def test_shape(self, fforward):
+        tmp = fforward(self.data, shape=(128, 128), axes=None)
+        assert_equal(tmp.shape, (128, 128))
+
+    @pytest.mark.parametrize('fforward,finverse', [(dctn, idctn),
+                                                   (dstn, idstn)])
+    @pytest.mark.parametrize('axes', [1, (1,), [1],
+                                      0, (0,), [0]])
+    def test_shape_is_none_with_axes(self, fforward, finverse, axes):
+        tmp = fforward(self.data, shape=None, axes=axes, norm='ortho')
+        tmp = finverse(tmp, shape=None, axes=axes, norm='ortho')
+        assert_array_almost_equal(self.data, tmp, decimal=self.dec)

.venv_haddock/lib/python3.12/site-packages/scipy/integrate/LICENSE_DOP

@@ -0,0 +1,76 @@
+Copyright (C) 2025 SciPy developers
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+
+    a. Redistributions of source code must retain the above copyright notice,
+       this list of conditions and the following disclaimer.
+    b. Redistributions in binary form must reproduce the above copyright
+       notice, this list of conditions and the following disclaimer in the
+       documentation and/or other materials provided with the distribution.
+    c. Names of the SciPy Developers may not be used to endorse or promote
+       products derived from this software without specific prior written
+       permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS
+BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY,
+OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF
+THE POSSIBILITY OF SUCH DAMAGE.
+
+
+DOP library consisting Dormand-Prince (4)5 and 8(5,3) integrators, is a
+C translation of the Fortran code written by Ernst Hairer, and Gerhard
+Wanner with the original descriptions below.
+
+* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+    NUMERICAL SOLUTION OF A SYSTEM OF FIRST 0RDER
+    ORDINARY DIFFERENTIAL EQUATIONS  Y'=F(X,Y).
+    THIS IS AN EXPLICIT RUNGE-KUTTA METHOD OF ORDER 8(5,3)
+    DUE TO DORMAND & PRINCE (WITH STEPSIZE CONTROL AND
+    DENSE OUTPUT)
+
+    AUTHORS: E. HAIRER AND G. WANNER
+             UNIVERSITE DE GENEVE, DEPT. DE MATHEMATIQUES
+             CH-1211 GENEVE 24, SWITZERLAND
+             E-MAIL:  Ernst.Hairer@math.unige.ch
+                      Gerhard.Wanner@math.unige.ch
+
+    THIS CODE IS DESCRIBED IN:
+        E. HAIRER, S.P. NORSETT AND G. WANNER, SOLVING ORDINARY
+        DIFFERENTIAL EQUATIONS I. NONSTIFF PROBLEMS. 2ND EDITION.
+        SPRINGER SERIES IN COMPUTATIONAL MATHEMATICS,
+        SPRINGER-VERLAG (1993)
+
+    VERSION OF APRIL 25, 1996
+    (latest correction of a small bug: August 8, 2005)
+
+* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+    NUMERICAL SOLUTION OF A SYSTEM OF FIRST 0RDER
+    ORDINARY DIFFERENTIAL EQUATIONS  Y'=F(X,Y).
+    THIS IS AN EXPLICIT RUNGE-KUTTA METHOD OF ORDER (4)5
+    DUE TO DORMAND & PRINCE (WITH STEPSIZE CONTROL AND
+    DENSE OUTPUT).
+
+    AUTHORS: E. HAIRER AND G. WANNER
+             UNIVERSITE DE GENEVE, DEPT. DE MATHEMATIQUES
+             CH-1211 GENEVE 24, SWITZERLAND
+             E-MAIL:  Ernst.Hairer@math.unige.ch
+                      Gerhard.Wanner@math.unige.ch
+
+    THIS CODE IS DESCRIBED IN:
+        E. HAIRER, S.P. NORSETT AND G. WANNER, SOLVING ORDINARY
+        DIFFERENTIAL EQUATIONS I. NONSTIFF PROBLEMS. 2ND EDITION.
+        SPRINGER SERIES IN COMPUTATIONAL MATHEMATICS,
+        SPRINGER-VERLAG (1993)
+
+    VERSION OF APRIL 25, 1996
+* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *

.venv_haddock/lib/python3.12/site-packages/scipy/integrate/__init__.py

@@ -0,0 +1,122 @@
+"""
+=============================================
+Integration and ODEs (:mod:`scipy.integrate`)
+=============================================
+
+.. currentmodule:: scipy.integrate
+
+Integrating functions, given function object
+============================================
+
+.. autosummary::
+   :toctree: generated/
+
+   quad          -- General purpose integration
+   quad_vec      -- General purpose integration of vector-valued functions
+   cubature      -- General purpose multi-dimensional integration of array-valued functions
+   dblquad       -- General purpose double integration
+   tplquad       -- General purpose triple integration
+   nquad         -- General purpose N-D integration
+   tanhsinh      -- General purpose elementwise integration
+   fixed_quad    -- Integrate func(x) using Gaussian quadrature of order n
+   newton_cotes  -- Weights and error coefficient for Newton-Cotes integration
+   lebedev_rule
+   qmc_quad      -- N-D integration using Quasi-Monte Carlo quadrature
+   IntegrationWarning -- Warning on issues during integration
+
+
+Integrating functions, given fixed samples
+==========================================
+
+.. autosummary::
+   :toctree: generated/
+
+   trapezoid            -- Use trapezoidal rule to compute integral.
+   cumulative_trapezoid -- Use trapezoidal rule to cumulatively compute integral.
+   simpson              -- Use Simpson's rule to compute integral from samples.
+   cumulative_simpson   -- Use Simpson's rule to cumulatively compute integral from samples.
+   romb                 -- Use Romberg Integration to compute integral from
+                        -- (2**k + 1) evenly-spaced samples.
+
+.. seealso::
+
+   :mod:`scipy.special` for orthogonal polynomials (special) for Gaussian
+   quadrature roots and weights for other weighting factors and regions.
+
+Summation
+=========
+
+.. autosummary::
+   :toctree: generated/
+
+   nsum
+
+Solving initial value problems for ODE systems
+==============================================
+
+The solvers are implemented as individual classes, which can be used directly
+(low-level usage) or through a convenience function.
+
+.. autosummary::
+   :toctree: generated/
+
+   solve_ivp     -- Convenient function for ODE integration.
+   RK23          -- Explicit Runge-Kutta solver of order 3(2).
+   RK45          -- Explicit Runge-Kutta solver of order 5(4).
+   DOP853        -- Explicit Runge-Kutta solver of order 8.
+   Radau         -- Implicit Runge-Kutta solver of order 5.
+   BDF           -- Implicit multi-step variable order (1 to 5) solver.
+   LSODA         -- LSODA solver from ODEPACK Fortran package.
+   OdeSolver     -- Base class for ODE solvers.
+   DenseOutput   -- Local interpolant for computing a dense output.
+   OdeSolution   -- Class which represents a continuous ODE solution.
+
+
+Old API
+-------
+
+These are the routines developed earlier for SciPy. They wrap older solvers
+implemented in Fortran (mostly ODEPACK). While the interface to them is not
+particularly convenient and certain features are missing compared to the new
+API, the solvers themselves are of good quality and work fast as compiled
+Fortran code. In some cases, it might be worth using this old API.
+
+.. autosummary::
+   :toctree: generated/
+
+   odeint        -- General integration of ordinary differential equations.
+   ode           -- Integrate ODE using VODE and ZVODE routines.
+   complex_ode   -- Convert a complex-valued ODE to real-valued and integrate.
+   ODEintWarning -- Warning raised during the execution of `odeint`.
+
+
+Solving boundary value problems for ODE systems
+===============================================
+
+.. autosummary::
+   :toctree: generated/
+
+   solve_bvp     -- Solve a boundary value problem for a system of ODEs.
+"""  # noqa: E501
+
+
+from ._quadrature import *
+from ._odepack_py import *
+from ._quadpack_py import *
+from ._ode import *
+from ._bvp import solve_bvp
+from ._ivp import (solve_ivp, OdeSolution, DenseOutput,
+                   OdeSolver, RK23, RK45, DOP853, Radau, BDF, LSODA)
+from ._quad_vec import quad_vec
+from ._tanhsinh import nsum, tanhsinh
+from ._cubature import cubature
+from ._lebedev import lebedev_rule
+
+# Deprecated namespaces, to be removed in v2.0.0
+from . import dop, lsoda, vode, odepack, quadpack
+
+__all__ = [s for s in dir() if not s.startswith('_')]
+
+from scipy._lib._testutils import PytestTester
+test = PytestTester(__name__)
+del PytestTester

.venv_haddock/lib/python3.12/site-packages/scipy/integrate/_bvp.py

@@ -0,0 +1,1162 @@
+"""Boundary value problem solver."""
+from warnings import warn
+
+import numpy as np
+from numpy.linalg import pinv
+
+from scipy.sparse import coo_matrix, csc_matrix
+from scipy.sparse.linalg import splu
+from scipy.optimize import OptimizeResult
+from scipy._lib._array_api import xp_capabilities
+
+
+EPS = np.finfo(float).eps
+
+
+def estimate_fun_jac(fun, x, y, p, f0=None):
+    """Estimate derivatives of an ODE system rhs with forward differences.
+
+    Returns
+    -------
+    df_dy : ndarray, shape (n, n, m)
+        Derivatives with respect to y. An element (i, j, q) corresponds to
+        d f_i(x_q, y_q) / d (y_q)_j.
+    df_dp : ndarray with shape (n, k, m) or None
+        Derivatives with respect to p. An element (i, j, q) corresponds to
+        d f_i(x_q, y_q, p) / d p_j. If `p` is empty, None is returned.
+    """
+    n, m = y.shape
+    if f0 is None:
+        f0 = fun(x, y, p)
+
+    dtype = y.dtype
+
+    df_dy = np.empty((n, n, m), dtype=dtype)
+    h = EPS**0.5 * (1 + np.abs(y))
+    for i in range(n):
+        y_new = y.copy()
+        y_new[i] += h[i]
+        hi = y_new[i] - y[i]
+        f_new = fun(x, y_new, p)
+        df_dy[:, i, :] = (f_new - f0) / hi
+
+    k = p.shape[0]
+    if k == 0:
+        df_dp = None
+    else:
+        df_dp = np.empty((n, k, m), dtype=dtype)
+        h = EPS**0.5 * (1 + np.abs(p))
+        for i in range(k):
+            p_new = p.copy()
+            p_new[i] += h[i]
+            hi = p_new[i] - p[i]
+            f_new = fun(x, y, p_new)
+            df_dp[:, i, :] = (f_new - f0) / hi
+
+    return df_dy, df_dp
+
+
+def estimate_bc_jac(bc, ya, yb, p, bc0=None):
+    """Estimate derivatives of boundary conditions with forward differences.
+
+    Returns
+    -------
+    dbc_dya : ndarray, shape (n + k, n)
+        Derivatives with respect to ya. An element (i, j) corresponds to
+        d bc_i / d ya_j.
+    dbc_dyb : ndarray, shape (n + k, n)
+        Derivatives with respect to yb. An element (i, j) corresponds to
+        d bc_i / d ya_j.
+    dbc_dp : ndarray with shape (n + k, k) or None
+        Derivatives with respect to p. An element (i, j) corresponds to
+        d bc_i / d p_j. If `p` is empty, None is returned.
+    """
+    n = ya.shape[0]
+    k = p.shape[0]
+
+    if bc0 is None:
+        bc0 = bc(ya, yb, p)
+
+    dtype = ya.dtype
+
+    dbc_dya = np.empty((n, n + k), dtype=dtype)
+    h = EPS**0.5 * (1 + np.abs(ya))
+    for i in range(n):
+        ya_new = ya.copy()
+        ya_new[i] += h[i]
+        hi = ya_new[i] - ya[i]
+        bc_new = bc(ya_new, yb, p)
+        dbc_dya[i] = (bc_new - bc0) / hi
+    dbc_dya = dbc_dya.T
+
+    h = EPS**0.5 * (1 + np.abs(yb))
+    dbc_dyb = np.empty((n, n + k), dtype=dtype)
+    for i in range(n):
+        yb_new = yb.copy()
+        yb_new[i] += h[i]
+        hi = yb_new[i] - yb[i]
+        bc_new = bc(ya, yb_new, p)
+        dbc_dyb[i] = (bc_new - bc0) / hi
+    dbc_dyb = dbc_dyb.T
+
+    if k == 0:
+        dbc_dp = None
+    else:
+        h = EPS**0.5 * (1 + np.abs(p))
+        dbc_dp = np.empty((k, n + k), dtype=dtype)
+        for i in range(k):
+            p_new = p.copy()
+            p_new[i] += h[i]
+            hi = p_new[i] - p[i]
+            bc_new = bc(ya, yb, p_new)
+            dbc_dp[i] = (bc_new - bc0) / hi
+        dbc_dp = dbc_dp.T
+
+    return dbc_dya, dbc_dyb, dbc_dp
+
+
+def compute_jac_indices(n, m, k):
+    """Compute indices for the collocation system Jacobian construction.
+
+    See `construct_global_jac` for the explanation.
+    """
+    i_col = np.repeat(np.arange((m - 1) * n), n)
+    j_col = (np.tile(np.arange(n), n * (m - 1)) +
+             np.repeat(np.arange(m - 1) * n, n**2))
+
+    i_bc = np.repeat(np.arange((m - 1) * n, m * n + k), n)
+    j_bc = np.tile(np.arange(n), n + k)
+
+    i_p_col = np.repeat(np.arange((m - 1) * n), k)
+    j_p_col = np.tile(np.arange(m * n, m * n + k), (m - 1) * n)
+
+    i_p_bc = np.repeat(np.arange((m - 1) * n, m * n + k), k)
+    j_p_bc = np.tile(np.arange(m * n, m * n + k), n + k)
+
+    i = np.hstack((i_col, i_col, i_bc, i_bc, i_p_col, i_p_bc))
+    j = np.hstack((j_col, j_col + n,
+                   j_bc, j_bc + (m - 1) * n,
+                   j_p_col, j_p_bc))
+
+    return i, j
+
+
+def stacked_matmul(a, b):
+    """Stacked matrix multiply: out[i,:,:] = np.dot(a[i,:,:], b[i,:,:]).
+
+    Empirical optimization. Use outer Python loop and BLAS for large
+    matrices, otherwise use a single einsum call.
+    """
+    if a.shape[1] > 50:
+        out = np.empty((a.shape[0], a.shape[1], b.shape[2]))
+        for i in range(a.shape[0]):
+            out[i] = np.dot(a[i], b[i])
+        return out
+    else:
+        return np.einsum('...ij,...jk->...ik', a, b)
+
+
+def construct_global_jac(n, m, k, i_jac, j_jac, h, df_dy, df_dy_middle, df_dp,
+                         df_dp_middle, dbc_dya, dbc_dyb, dbc_dp):
+    """Construct the Jacobian of the collocation system.
+
+    There are n * m + k functions: m - 1 collocations residuals, each
+    containing n components, followed by n + k boundary condition residuals.
+
+    There are n * m + k variables: m vectors of y, each containing n
+    components, followed by k values of vector p.
+
+    For example, let m = 4, n = 2 and k = 1, then the Jacobian will have
+    the following sparsity structure:
+
+        1 1 2 2 0 0 0 0  5
+        1 1 2 2 0 0 0 0  5
+        0 0 1 1 2 2 0 0  5
+        0 0 1 1 2 2 0 0  5
+        0 0 0 0 1 1 2 2  5
+        0 0 0 0 1 1 2 2  5
+
+        3 3 0 0 0 0 4 4  6
+        3 3 0 0 0 0 4 4  6
+        3 3 0 0 0 0 4 4  6
+
+    Zeros denote identically zero values, other values denote different kinds
+    of blocks in the matrix (see below). The blank row indicates the separation
+    of collocation residuals from boundary conditions. And the blank column
+    indicates the separation of y values from p values.
+
+    Refer to [1]_  (p. 306) for the formula of n x n blocks for derivatives
+    of collocation residuals with respect to y.
+
+    Parameters
+    ----------
+    n : int
+        Number of equations in the ODE system.
+    m : int
+        Number of nodes in the mesh.
+    k : int
+        Number of the unknown parameters.
+    i_jac, j_jac : ndarray
+        Row and column indices returned by `compute_jac_indices`. They
+        represent different blocks in the Jacobian matrix in the following
+        order (see the scheme above):
+
+            * 1: m - 1 diagonal n x n blocks for the collocation residuals.
+            * 2: m - 1 off-diagonal n x n blocks for the collocation residuals.
+            * 3 : (n + k) x n block for the dependency of the boundary
+              conditions on ya.
+            * 4: (n + k) x n block for the dependency of the boundary
+              conditions on yb.
+            * 5: (m - 1) * n x k block for the dependency of the collocation
+              residuals on p.
+            * 6: (n + k) x k block for the dependency of the boundary
+              conditions on p.
+
+    df_dy : ndarray, shape (n, n, m)
+        Jacobian of f with respect to y computed at the mesh nodes.
+    df_dy_middle : ndarray, shape (n, n, m - 1)
+        Jacobian of f with respect to y computed at the middle between the
+        mesh nodes.
+    df_dp : ndarray with shape (n, k, m) or None
+        Jacobian of f with respect to p computed at the mesh nodes.
+    df_dp_middle : ndarray with shape (n, k, m - 1) or None
+        Jacobian of f with respect to p computed at the middle between the
+        mesh nodes.
+    dbc_dya, dbc_dyb : ndarray, shape (n, n)
+        Jacobian of bc with respect to ya and yb.
+    dbc_dp : ndarray with shape (n, k) or None
+        Jacobian of bc with respect to p.
+
+    Returns
+    -------
+    J : csc_matrix, shape (n * m + k, n * m + k)
+        Jacobian of the collocation system in a sparse form.
+
+    References
+    ----------
+    .. [1] J. Kierzenka, L. F. Shampine, "A BVP Solver Based on Residual
+       Control and the Maltab PSE", ACM Trans. Math. Softw., Vol. 27,
+       Number 3, pp. 299-316, 2001.
+    """
+    df_dy = np.transpose(df_dy, (2, 0, 1))
+    df_dy_middle = np.transpose(df_dy_middle, (2, 0, 1))
+
+    h = h[:, np.newaxis, np.newaxis]
+
+    dtype = df_dy.dtype
+
+    # Computing diagonal n x n blocks.
+    dPhi_dy_0 = np.empty((m - 1, n, n), dtype=dtype)
+    dPhi_dy_0[:] = -np.identity(n)
+    dPhi_dy_0 -= h / 6 * (df_dy[:-1] + 2 * df_dy_middle)
+    T = stacked_matmul(df_dy_middle, df_dy[:-1])
+    dPhi_dy_0 -= h**2 / 12 * T
+
+    # Computing off-diagonal n x n blocks.
+    dPhi_dy_1 = np.empty((m - 1, n, n), dtype=dtype)
+    dPhi_dy_1[:] = np.identity(n)
+    dPhi_dy_1 -= h / 6 * (df_dy[1:] + 2 * df_dy_middle)
+    T = stacked_matmul(df_dy_middle, df_dy[1:])
+    dPhi_dy_1 += h**2 / 12 * T
+
+    values = np.hstack((dPhi_dy_0.ravel(), dPhi_dy_1.ravel(), dbc_dya.ravel(),
+                        dbc_dyb.ravel()))
+
+    if k > 0:
+        df_dp = np.transpose(df_dp, (2, 0, 1))
+        df_dp_middle = np.transpose(df_dp_middle, (2, 0, 1))
+        T = stacked_matmul(df_dy_middle, df_dp[:-1] - df_dp[1:])
+        df_dp_middle += 0.125 * h * T
+        dPhi_dp = -h/6 * (df_dp[:-1] + df_dp[1:] + 4 * df_dp_middle)
+        values = np.hstack((values, dPhi_dp.ravel(), dbc_dp.ravel()))
+
+    J = coo_matrix((values, (i_jac, j_jac)))
+    return csc_matrix(J)
+
+
+def collocation_fun(fun, y, p, x, h):
+    """Evaluate collocation residuals.
+
+    This function lies in the core of the method. The solution is sought
+    as a cubic C1 continuous spline with derivatives matching the ODE rhs
+    at given nodes `x`. Collocation conditions are formed from the equality
+    of the spline derivatives and rhs of the ODE system in the middle points
+    between nodes.
+
+    Such method is classified to Lobbato IIIA family in ODE literature.
+    Refer to [1]_ for the formula and some discussion.
+
+    Returns
+    -------
+    col_res : ndarray, shape (n, m - 1)
+        Collocation residuals at the middle points of the mesh intervals.
+    y_middle : ndarray, shape (n, m - 1)
+        Values of the cubic spline evaluated at the middle points of the mesh
+        intervals.
+    f : ndarray, shape (n, m)
+        RHS of the ODE system evaluated at the mesh nodes.
+    f_middle : ndarray, shape (n, m - 1)
+        RHS of the ODE system evaluated at the middle points of the mesh
+        intervals (and using `y_middle`).
+
+    References
+    ----------
+    .. [1] J. Kierzenka, L. F. Shampine, "A BVP Solver Based on Residual
+           Control and the Maltab PSE", ACM Trans. Math. Softw., Vol. 27,
+           Number 3, pp. 299-316, 2001.
+    """
+    f = fun(x, y, p)
+    y_middle = (0.5 * (y[:, 1:] + y[:, :-1]) -
+                0.125 * h * (f[:, 1:] - f[:, :-1]))
+    f_middle = fun(x[:-1] + 0.5 * h, y_middle, p)
+    col_res = y[:, 1:] - y[:, :-1] - h / 6 * (f[:, :-1] + f[:, 1:] +
+                                              4 * f_middle)
+
+    return col_res, y_middle, f, f_middle
+
+
+def prepare_sys(n, m, k, fun, bc, fun_jac, bc_jac, x, h):
+    """Create the function and the Jacobian for the collocation system."""
+    x_middle = x[:-1] + 0.5 * h
+    i_jac, j_jac = compute_jac_indices(n, m, k)
+
+    def col_fun(y, p):
+        return collocation_fun(fun, y, p, x, h)
+
+    def sys_jac(y, p, y_middle, f, f_middle, bc0):
+        if fun_jac is None:
+            df_dy, df_dp = estimate_fun_jac(fun, x, y, p, f)
+            df_dy_middle, df_dp_middle = estimate_fun_jac(
+                fun, x_middle, y_middle, p, f_middle)
+        else:
+            df_dy, df_dp = fun_jac(x, y, p)
+            df_dy_middle, df_dp_middle = fun_jac(x_middle, y_middle, p)
+
+        if bc_jac is None:
+            dbc_dya, dbc_dyb, dbc_dp = estimate_bc_jac(bc, y[:, 0], y[:, -1],
+                                                       p, bc0)
+        else:
+            dbc_dya, dbc_dyb, dbc_dp = bc_jac(y[:, 0], y[:, -1], p)
+
+        return construct_global_jac(n, m, k, i_jac, j_jac, h, df_dy,
+                                    df_dy_middle, df_dp, df_dp_middle, dbc_dya,
+                                    dbc_dyb, dbc_dp)
+
+    return col_fun, sys_jac
+
+
+def solve_newton(n, m, h, col_fun, bc, jac, y, p, B, bvp_tol, bc_tol):
+    """Solve the nonlinear collocation system by a Newton method.
+
+    This is a simple Newton method with a backtracking line search. As
+    advised in [1]_, an affine-invariant criterion function F = ||J^-1 r||^2
+    is used, where J is the Jacobian matrix at the current iteration and r is
+    the vector or collocation residuals (values of the system lhs).
+
+    The method alters between full Newton iterations and the fixed-Jacobian
+    iterations based
+
+    There are other tricks proposed in [1]_, but they are not used as they
+    don't seem to improve anything significantly, and even break the
+    convergence on some test problems I tried.
+
+    All important parameters of the algorithm are defined inside the function.
+
+    Parameters
+    ----------
+    n : int
+        Number of equations in the ODE system.
+    m : int
+        Number of nodes in the mesh.
+    h : ndarray, shape (m-1,)
+        Mesh intervals.
+    col_fun : callable
+        Function computing collocation residuals.
+    bc : callable
+        Function computing boundary condition residuals.
+    jac : callable
+        Function computing the Jacobian of the whole system (including
+        collocation and boundary condition residuals). It is supposed to
+        return csc_matrix.
+    y : ndarray, shape (n, m)
+        Initial guess for the function values at the mesh nodes.
+    p : ndarray, shape (k,)
+        Initial guess for the unknown parameters.
+    B : ndarray with shape (n, n) or None
+        Matrix to force the S y(a) = 0 condition for a problems with the
+        singular term. If None, the singular term is assumed to be absent.
+    bvp_tol : float
+        Tolerance to which we want to solve a BVP.
+    bc_tol : float
+        Tolerance to which we want to satisfy the boundary conditions.
+
+    Returns
+    -------
+    y : ndarray, shape (n, m)
+        Final iterate for the function values at the mesh nodes.
+    p : ndarray, shape (k,)
+        Final iterate for the unknown parameters.
+    singular : bool
+        True, if the LU decomposition failed because Jacobian turned out
+        to be singular.
+
+    References
+    ----------
+    .. [1]  U. Ascher, R. Mattheij and R. Russell "Numerical Solution of
+       Boundary Value Problems for Ordinary Differential Equations",
+       Philidelphia, PA: Society for Industrial and Applied Mathematics,
+       1995.
+    """
+    # We know that the solution residuals at the middle points of the mesh
+    # are connected with collocation residuals  r_middle = 1.5 * col_res / h.
+    # As our BVP solver tries to decrease relative residuals below a certain
+    # tolerance, it seems reasonable to terminated Newton iterations by
+    # comparison of r_middle / (1 + np.abs(f_middle)) with a certain threshold,
+    # which we choose to be 1.5 orders lower than the BVP tolerance. We rewrite
+    # the condition as col_res < tol_r * (1 + np.abs(f_middle)), then tol_r
+    # should be computed as follows:
+    tol_r = 2/3 * h * 5e-2 * bvp_tol
+
+    # Maximum allowed number of Jacobian evaluation and factorization, in
+    # other words, the maximum number of full Newton iterations. A small value
+    # is recommended in the literature.
+    max_njev = 4
+
+    # Maximum number of iterations, considering that some of them can be
+    # performed with the fixed Jacobian. In theory, such iterations are cheap,
+    # but it's not that simple in Python.
+    max_iter = 8
+
+    # Minimum relative improvement of the criterion function to accept the
+    # step (Armijo constant).
+    sigma = 0.2
+
+    # Step size decrease factor for backtracking.
+    tau = 0.5
+
+    # Maximum number of backtracking steps, the minimum step is then
+    # tau ** n_trial.
+    n_trial = 4
+
+    col_res, y_middle, f, f_middle = col_fun(y, p)
+    bc_res = bc(y[:, 0], y[:, -1], p)
+    res = np.hstack((col_res.ravel(order='F'), bc_res))
+
+    njev = 0
+    singular = False
+    recompute_jac = True
+    for iteration in range(max_iter):
+        if recompute_jac:
+            J = jac(y, p, y_middle, f, f_middle, bc_res)
+            njev += 1
+            try:
+                LU = splu(J)
+            except RuntimeError:
+                singular = True
+                break
+
+            step = LU.solve(res)
+            cost = np.dot(step, step)
+
+        y_step = step[:m * n].reshape((n, m), order='F')
+        p_step = step[m * n:]
+
+        alpha = 1
+        for trial in range(n_trial + 1):
+            y_new = y - alpha * y_step
+            if B is not None:
+                y_new[:, 0] = np.dot(B, y_new[:, 0])
+            p_new = p - alpha * p_step
+
+            col_res, y_middle, f, f_middle = col_fun(y_new, p_new)
+            bc_res = bc(y_new[:, 0], y_new[:, -1], p_new)
+            res = np.hstack((col_res.ravel(order='F'), bc_res))
+
+            step_new = LU.solve(res)
+            cost_new = np.dot(step_new, step_new)
+            if cost_new < (1 - 2 * alpha * sigma) * cost:
+                break
+
+            if trial < n_trial:
+                alpha *= tau
+
+        y = y_new
+        p = p_new
+
+        if njev == max_njev:
+            break
+
+        if (np.all(np.abs(col_res) < tol_r * (1 + np.abs(f_middle))) and
+                np.all(np.abs(bc_res) < bc_tol)):
+            break
+
+        # If the full step was taken, then we are going to continue with
+        # the same Jacobian. This is the approach of BVP_SOLVER.
+        if alpha == 1:
+            step = step_new
+            cost = cost_new
+            recompute_jac = False
+        else:
+            recompute_jac = True
+
+    return y, p, singular
+
+
+def print_iteration_header():
+    print(f"{'Iteration':^15}{'Max residual':^15}{'Max BC residual':^15}"
+          f"{'Total nodes':^15}{'Nodes added':^15}")
+
+
+def print_iteration_progress(iteration, residual, bc_residual, total_nodes,
+                             nodes_added):
+    print(f"{iteration:^15}{residual:^15.2e}{bc_residual:^15.2e}"
+          f"{total_nodes:^15}{nodes_added:^15}")
+
+
+class BVPResult(OptimizeResult):
+    pass
+
+
+TERMINATION_MESSAGES = {
+    0: "The algorithm converged to the desired accuracy.",
+    1: "The maximum number of mesh nodes is exceeded.",
+    2: "A singular Jacobian encountered when solving the collocation system.",
+    3: "The solver was unable to satisfy boundary conditions tolerance on iteration 10."
+}
+
+
+def estimate_rms_residuals(fun, sol, x, h, p, r_middle, f_middle):
+    """Estimate rms values of collocation residuals using Lobatto quadrature.
+
+    The residuals are defined as the difference between the derivatives of
+    our solution and rhs of the ODE system. We use relative residuals, i.e.,
+    normalized by 1 + np.abs(f). RMS values are computed as sqrt from the
+    normalized integrals of the squared relative residuals over each interval.
+    Integrals are estimated using 5-point Lobatto quadrature [1]_, we use the
+    fact that residuals at the mesh nodes are identically zero.
+
+    In [2] they don't normalize integrals by interval lengths, which gives
+    a higher rate of convergence of the residuals by the factor of h**0.5.
+    I chose to do such normalization for an ease of interpretation of return
+    values as RMS estimates.
+
+    Returns
+    -------
+    rms_res : ndarray, shape (m - 1,)
+        Estimated rms values of the relative residuals over each interval.
+
+    References
+    ----------
+    .. [1] http://mathworld.wolfram.com/LobattoQuadrature.html
+    .. [2] J. Kierzenka, L. F. Shampine, "A BVP Solver Based on Residual
+       Control and the Maltab PSE", ACM Trans. Math. Softw., Vol. 27,
+       Number 3, pp. 299-316, 2001.
+    """
+    x_middle = x[:-1] + 0.5 * h
+    s = 0.5 * h * (3/7)**0.5
+    x1 = x_middle + s
+    x2 = x_middle - s
+    y1 = sol(x1)
+    y2 = sol(x2)
+    y1_prime = sol(x1, 1)
+    y2_prime = sol(x2, 1)
+    f1 = fun(x1, y1, p)
+    f2 = fun(x2, y2, p)
+    r1 = y1_prime - f1
+    r2 = y2_prime - f2
+
+    r_middle /= 1 + np.abs(f_middle)
+    r1 /= 1 + np.abs(f1)
+    r2 /= 1 + np.abs(f2)
+
+    r1 = np.sum(np.real(r1 * np.conj(r1)), axis=0)
+    r2 = np.sum(np.real(r2 * np.conj(r2)), axis=0)
+    r_middle = np.sum(np.real(r_middle * np.conj(r_middle)), axis=0)
+
+    return (0.5 * (32 / 45 * r_middle + 49 / 90 * (r1 + r2))) ** 0.5
+
+
+def create_spline(y, yp, x, h):
+    """Create a cubic spline given values and derivatives.
+
+    Formulas for the coefficients are taken from interpolate.CubicSpline.
+
+    Returns
+    -------
+    sol : PPoly
+        Constructed spline as a PPoly instance.
+    """
+    from scipy.interpolate import PPoly
+
+    n, m = y.shape
+    c = np.empty((4, n, m - 1), dtype=y.dtype)
+    slope = (y[:, 1:] - y[:, :-1]) / h
+    t = (yp[:, :-1] + yp[:, 1:] - 2 * slope) / h
+    c[0] = t / h
+    c[1] = (slope - yp[:, :-1]) / h - t
+    c[2] = yp[:, :-1]
+    c[3] = y[:, :-1]
+    c = np.moveaxis(c, 1, 0)
+
+    return PPoly(c, x, extrapolate=True, axis=1)
+
+
+def modify_mesh(x, insert_1, insert_2):
+    """Insert nodes into a mesh.
+
+    Nodes removal logic is not established, its impact on the solver is
+    presumably negligible. So, only insertion is done in this function.
+
+    Parameters
+    ----------
+    x : ndarray, shape (m,)
+        Mesh nodes.
+    insert_1 : ndarray
+        Intervals to each insert 1 new node in the middle.
+    insert_2 : ndarray
+        Intervals to each insert 2 new nodes, such that divide an interval
+        into 3 equal parts.
+
+    Returns
+    -------
+    x_new : ndarray
+        New mesh nodes.
+
+    Notes
+    -----
+    `insert_1` and `insert_2` should not have common values.
+    """
+    # Because np.insert implementation apparently varies with a version of
+    # NumPy, we use a simple and reliable approach with sorting.
+    return np.sort(np.hstack((
+        x,
+        0.5 * (x[insert_1] + x[insert_1 + 1]),
+        (2 * x[insert_2] + x[insert_2 + 1]) / 3,
+        (x[insert_2] + 2 * x[insert_2 + 1]) / 3
+    )))
+
+
+def wrap_functions(fun, bc, fun_jac, bc_jac, k, a, S, D, dtype):
+    """Wrap functions for unified usage in the solver."""
+    if fun_jac is None:
+        fun_jac_wrapped = None
+
+    if bc_jac is None:
+        bc_jac_wrapped = None
+
+    if k == 0:
+        def fun_p(x, y, _):
+            return np.asarray(fun(x, y), dtype)
+
+        def bc_wrapped(ya, yb, _):
+            return np.asarray(bc(ya, yb), dtype)
+
+        if fun_jac is not None:
+            def fun_jac_p(x, y, _):
+                return np.asarray(fun_jac(x, y), dtype), None
+
+        if bc_jac is not None:
+            def bc_jac_wrapped(ya, yb, _):
+                dbc_dya, dbc_dyb = bc_jac(ya, yb)
+                return (np.asarray(dbc_dya, dtype),
+                        np.asarray(dbc_dyb, dtype), None)
+    else:
+        def fun_p(x, y, p):
+            return np.asarray(fun(x, y, p), dtype)
+
+        def bc_wrapped(x, y, p):
+            return np.asarray(bc(x, y, p), dtype)
+
+        if fun_jac is not None:
+            def fun_jac_p(x, y, p):
+                df_dy, df_dp = fun_jac(x, y, p)
+                return np.asarray(df_dy, dtype), np.asarray(df_dp, dtype)
+
+        if bc_jac is not None:
+            def bc_jac_wrapped(ya, yb, p):
+                dbc_dya, dbc_dyb, dbc_dp = bc_jac(ya, yb, p)
+                return (np.asarray(dbc_dya, dtype), np.asarray(dbc_dyb, dtype),
+                        np.asarray(dbc_dp, dtype))
+
+    if S is None:
+        fun_wrapped = fun_p
+    else:
+        def fun_wrapped(x, y, p):
+            f = fun_p(x, y, p)
+            if x[0] == a:
+                f[:, 0] = np.dot(D, f[:, 0])
+                f[:, 1:] += np.dot(S, y[:, 1:]) / (x[1:] - a)
+            else:
+                f += np.dot(S, y) / (x - a)
+            return f
+
+    if fun_jac is not None:
+        if S is None:
+            fun_jac_wrapped = fun_jac_p
+        else:
+            Sr = S[:, :, np.newaxis]
+
+            def fun_jac_wrapped(x, y, p):
+                df_dy, df_dp = fun_jac_p(x, y, p)
+                if x[0] == a:
+                    df_dy[:, :, 0] = np.dot(D, df_dy[:, :, 0])
+                    df_dy[:, :, 1:] += Sr / (x[1:] - a)
+                else:
+                    df_dy += Sr / (x - a)
+
+                return df_dy, df_dp
+
+    return fun_wrapped, bc_wrapped, fun_jac_wrapped, bc_jac_wrapped
+
+
+@xp_capabilities(np_only=True)
+def solve_bvp(fun, bc, x, y, p=None, S=None, fun_jac=None, bc_jac=None,
+              tol=1e-3, max_nodes=1000, verbose=0, bc_tol=None):
+    """Solve a boundary value problem for a system of ODEs.
+
+    This function numerically solves a first order system of ODEs subject to
+    two-point boundary conditions::
+
+        dy / dx = f(x, y, p) + S * y / (x - a), a <= x <= b
+        bc(y(a), y(b), p) = 0
+
+    Here x is a 1-D independent variable, y(x) is an n-D
+    vector-valued function and p is a k-D vector of unknown
+    parameters which is to be found along with y(x). For the problem to be
+    determined, there must be n + k boundary conditions, i.e., bc must be an
+    (n + k)-D function.
+
+    The last singular term on the right-hand side of the system is optional.
+    It is defined by an n-by-n matrix S, such that the solution must satisfy
+    S y(a) = 0. This condition will be forced during iterations, so it must not
+    contradict boundary conditions. See [2]_ for the explanation how this term
+    is handled when solving BVPs numerically.
+
+    Problems in a complex domain can be solved as well. In this case, y and p
+    are considered to be complex, and f and bc are assumed to be complex-valued
+    functions, but x stays real. Note that f and bc must be complex
+    differentiable (satisfy Cauchy-Riemann equations [4]_), otherwise you
+    should rewrite your problem for real and imaginary parts separately. To
+    solve a problem in a complex domain, pass an initial guess for y with a
+    complex data type (see below).
+
+    Parameters
+    ----------
+    fun : callable
+        Right-hand side of the system. The calling signature is ``fun(x, y)``,
+        or ``fun(x, y, p)`` if parameters are present. All arguments are
+        ndarray: ``x`` with shape (m,), ``y`` with shape (n, m), meaning that
+        ``y[:, i]`` corresponds to ``x[i]``, and ``p`` with shape (k,). The
+        return value must be an array with shape (n, m) and with the same
+        layout as ``y``.
+    bc : callable
+        Function evaluating residuals of the boundary conditions. The calling
+        signature is ``bc(ya, yb)``, or ``bc(ya, yb, p)`` if parameters are
+        present. All arguments are ndarray: ``ya`` and ``yb`` with shape (n,),
+        and ``p`` with shape (k,). The return value must be an array with
+        shape (n + k,).
+    x : array_like, shape (m,)
+        Initial mesh. Must be a strictly increasing sequence of real numbers
+        with ``x[0]=a`` and ``x[-1]=b``.
+    y : array_like, shape (n, m)
+        Initial guess for the function values at the mesh nodes, ith column
+        corresponds to ``x[i]``. For problems in a complex domain pass `y`
+        with a complex data type (even if the initial guess is purely real).
+    p : array_like with shape (k,) or None, optional
+        Initial guess for the unknown parameters. If None (default), it is
+        assumed that the problem doesn't depend on any parameters.
+    S : array_like with shape (n, n) or None
+        Matrix defining the singular term. If None (default), the problem is
+        solved without the singular term.
+    fun_jac : callable or None, optional
+        Function computing derivatives of f with respect to y and p. The
+        calling signature is ``fun_jac(x, y)``, or ``fun_jac(x, y, p)`` if
+        parameters are present. The return must contain 1 or 2 elements in the
+        following order:
+
+            * df_dy : array_like with shape (n, n, m), where an element
+              (i, j, q) equals to d f_i(x_q, y_q, p) / d (y_q)_j.
+            * df_dp : array_like with shape (n, k, m), where an element
+              (i, j, q) equals to d f_i(x_q, y_q, p) / d p_j.
+
+        Here q numbers nodes at which x and y are defined, whereas i and j
+        number vector components. If the problem is solved without unknown
+        parameters, df_dp should not be returned.
+
+        If `fun_jac` is None (default), the derivatives will be estimated
+        by the forward finite differences.
+    bc_jac : callable or None, optional
+        Function computing derivatives of bc with respect to ya, yb, and p.
+        The calling signature is ``bc_jac(ya, yb)``, or ``bc_jac(ya, yb, p)``
+        if parameters are present. The return must contain 2 or 3 elements in
+        the following order:
+
+            * dbc_dya : array_like with shape (n, n), where an element (i, j)
+              equals to d bc_i(ya, yb, p) / d ya_j.
+            * dbc_dyb : array_like with shape (n, n), where an element (i, j)
+              equals to d bc_i(ya, yb, p) / d yb_j.
+            * dbc_dp : array_like with shape (n, k), where an element (i, j)
+              equals to d bc_i(ya, yb, p) / d p_j.
+
+        If the problem is solved without unknown parameters, dbc_dp should not
+        be returned.
+
+        If `bc_jac` is None (default), the derivatives will be estimated by
+        the forward finite differences.
+    tol : float, optional
+        Desired tolerance of the solution. If we define ``r = y' - f(x, y)``,
+        where y is the found solution, then the solver tries to achieve on each
+        mesh interval ``norm(r / (1 + abs(f)) < tol``, where ``norm`` is
+        estimated in a root mean squared sense (using a numerical quadrature
+        formula). Default is 1e-3.
+    max_nodes : int, optional
+        Maximum allowed number of the mesh nodes. If exceeded, the algorithm
+        terminates. Default is 1000.
+    verbose : {0, 1, 2}, optional
+        Level of algorithm's verbosity:
+
+            * 0 (default) : work silently.
+            * 1 : display a termination report.
+            * 2 : display progress during iterations.
+    bc_tol : float, optional
+        Desired absolute tolerance for the boundary condition residuals: `bc`
+        value should satisfy ``abs(bc) < bc_tol`` component-wise.
+        Equals to `tol` by default. Up to 10 iterations are allowed to achieve this
+        tolerance.
+
+    Returns
+    -------
+    Bunch object with the following fields defined:
+    sol : PPoly
+        Found solution for y as `scipy.interpolate.PPoly` instance, a C1
+        continuous cubic spline.
+    p : ndarray or None, shape (k,)
+        Found parameters. None, if the parameters were not present in the
+        problem.
+    x : ndarray, shape (m,)
+        Nodes of the final mesh.
+    y : ndarray, shape (n, m)
+        Solution values at the mesh nodes.
+    yp : ndarray, shape (n, m)
+        Solution derivatives at the mesh nodes.
+    rms_residuals : ndarray, shape (m - 1,)
+        RMS values of the relative residuals over each mesh interval (see the
+        description of `tol` parameter).
+    niter : int
+        Number of completed iterations.
+    status : int
+        Reason for algorithm termination:
+
+            * 0: The algorithm converged to the desired accuracy.
+            * 1: The maximum number of mesh nodes is exceeded.
+            * 2: A singular Jacobian encountered when solving the collocation
+              system.
+
+    message : string
+        Verbal description of the termination reason.
+    success : bool
+        True if the algorithm converged to the desired accuracy (``status=0``).
+
+    Notes
+    -----
+    This function implements a 4th order collocation algorithm with the
+    control of residuals similar to [1]_. A collocation system is solved
+    by a damped Newton method with an affine-invariant criterion function as
+    described in [3]_.
+
+    Note that in [1]_  integral residuals are defined without normalization
+    by interval lengths. So, their definition is different by a multiplier of
+    h**0.5 (h is an interval length) from the definition used here.
+
+    .. versionadded:: 0.18.0
+
+    References
+    ----------
+    .. [1] J. Kierzenka, L. F. Shampine, "A BVP Solver Based on Residual
+           Control and the Maltab PSE", ACM Trans. Math. Softw., Vol. 27,
+           Number 3, pp. 299-316, 2001.
+    .. [2] L.F. Shampine, P. H. Muir and H. Xu, "A User-Friendly Fortran BVP
+           Solver", J. Numer. Anal., Ind. Appl. Math. (JNAIAM), Vol. 1, 
+           Number 2, pp. 201-217, 2006.
+    .. [3] U. Ascher, R. Mattheij and R. Russell "Numerical Solution of
+           Boundary Value Problems for Ordinary Differential Equations",
+           Philidelphia, PA: Society for Industrial and Applied Mathematics,
+           1995.
+           :doi:`10.1137/1.9781611971231`
+    .. [4] `Cauchy-Riemann equations
+            <https://en.wikipedia.org/wiki/Cauchy-Riemann_equations>`_ on
+            Wikipedia.
+
+    Examples
+    --------
+    In the first example, we solve Bratu's problem::
+
+        y'' + k * exp(y) = 0
+        y(0) = y(1) = 0
+
+    for k = 1.
+
+    We rewrite the equation as a first-order system and implement its
+    right-hand side evaluation::
+
+        y1' = y2
+        y2' = -exp(y1)
+
+    >>> import numpy as np
+    >>> def fun(x, y):
+    ...     return np.vstack((y[1], -np.exp(y[0])))
+
+    Implement evaluation of the boundary condition residuals:
+
+    >>> def bc(ya, yb):
+    ...     return np.array([ya[0], yb[0]])
+
+    Define the initial mesh with 5 nodes:
+
+    >>> x = np.linspace(0, 1, 5)
+
+    This problem is known to have two solutions. To obtain both of them, we
+    use two different initial guesses for y. We denote them by subscripts
+    a and b.
+
+    >>> y_a = np.zeros((2, x.size))
+    >>> y_b = np.zeros((2, x.size))
+    >>> y_b[0] = 3
+
+    Now we are ready to run the solver.
+
+    >>> from scipy.integrate import solve_bvp
+    >>> res_a = solve_bvp(fun, bc, x, y_a)
+    >>> res_b = solve_bvp(fun, bc, x, y_b)
+
+    Let's plot the two found solutions. We take an advantage of having the
+    solution in a spline form to produce a smooth plot.
+
+    >>> x_plot = np.linspace(0, 1, 100)
+    >>> y_plot_a = res_a.sol(x_plot)[0]
+    >>> y_plot_b = res_b.sol(x_plot)[0]
+    >>> import matplotlib.pyplot as plt
+    >>> plt.plot(x_plot, y_plot_a, label='y_a')
+    >>> plt.plot(x_plot, y_plot_b, label='y_b')
+    >>> plt.legend()
+    >>> plt.xlabel("x")
+    >>> plt.ylabel("y")
+    >>> plt.show()
+
+    We see that the two solutions have similar shape, but differ in scale
+    significantly.
+
+    In the second example, we solve a simple Sturm-Liouville problem::
+
+        y'' + k**2 * y = 0
+        y(0) = y(1) = 0
+
+    It is known that a non-trivial solution y = A * sin(k * x) is possible for
+    k = pi * n, where n is an integer. To establish the normalization constant
+    A = 1 we add a boundary condition::
+
+        y'(0) = k
+
+    Again, we rewrite our equation as a first-order system and implement its
+    right-hand side evaluation::
+
+        y1' = y2
+        y2' = -k**2 * y1
+
+    >>> def fun(x, y, p):
+    ...     k = p[0]
+    ...     return np.vstack((y[1], -k**2 * y[0]))
+
+    Note that parameters p are passed as a vector (with one element in our
+    case).
+
+    Implement the boundary conditions:
+
+    >>> def bc(ya, yb, p):
+    ...     k = p[0]
+    ...     return np.array([ya[0], yb[0], ya[1] - k])
+
+    Set up the initial mesh and guess for y. We aim to find the solution for
+    k = 2 * pi, to achieve that we set values of y to approximately follow
+    sin(2 * pi * x):
+
+    >>> x = np.linspace(0, 1, 5)
+    >>> y = np.zeros((2, x.size))
+    >>> y[0, 1] = 1
+    >>> y[0, 3] = -1
+
+    Run the solver with 6 as an initial guess for k.
+
+    >>> sol = solve_bvp(fun, bc, x, y, p=[6])
+
+    We see that the found k is approximately correct:
+
+    >>> sol.p[0]
+    6.28329460046
+
+    And, finally, plot the solution to see the anticipated sinusoid:
+
+    >>> x_plot = np.linspace(0, 1, 100)
+    >>> y_plot = sol.sol(x_plot)[0]
+    >>> plt.plot(x_plot, y_plot)
+    >>> plt.xlabel("x")
+    >>> plt.ylabel("y")
+    >>> plt.show()
+    """
+    x = np.asarray(x, dtype=float)
+    if x.ndim != 1:
+        raise ValueError("`x` must be 1 dimensional.")
+    h = np.diff(x)
+    if np.any(h <= 0):
+        raise ValueError("`x` must be strictly increasing.")
+    a = x[0]
+
+    y = np.asarray(y)
+    if np.issubdtype(y.dtype, np.complexfloating):
+        dtype = complex
+    else:
+        dtype = float
+    y = y.astype(dtype, copy=False)
+
+    if y.ndim != 2:
+        raise ValueError("`y` must be 2 dimensional.")
+    if y.shape[1] != x.shape[0]:
+        raise ValueError(f"`y` is expected to have {x.shape[0]} columns, but actually "
+                         f"has {y.shape[1]}.")
+
+    if p is None:
+        p = np.array([])
+    else:
+        p = np.asarray(p, dtype=dtype)
+    if p.ndim != 1:
+        raise ValueError("`p` must be 1 dimensional.")
+
+    if tol < 100 * EPS:
+        warn(f"`tol` is too low, setting to {100 * EPS:.2e}", stacklevel=2)
+        tol = 100 * EPS
+
+    if verbose not in [0, 1, 2]:
+        raise ValueError("`verbose` must be in [0, 1, 2].")
+
+    n = y.shape[0]
+    k = p.shape[0]
+
+    if S is not None:
+        S = np.asarray(S, dtype=dtype)
+        if S.shape != (n, n):
+            raise ValueError(f"`S` is expected to have shape {(n, n)}, "
+                             f"but actually has {S.shape}")
+
+        # Compute I - S^+ S to impose necessary boundary conditions.
+        B = np.identity(n) - np.dot(pinv(S), S)
+
+        y[:, 0] = np.dot(B, y[:, 0])
+
+        # Compute (I - S)^+ to correct derivatives at x=a.
+        D = pinv(np.identity(n) - S)
+    else:
+        B = None
+        D = None
+
+    if bc_tol is None:
+        bc_tol = tol
+
+    # Maximum number of iterations
+    max_iteration = 10
+
+    fun_wrapped, bc_wrapped, fun_jac_wrapped, bc_jac_wrapped = wrap_functions(
+        fun, bc, fun_jac, bc_jac, k, a, S, D, dtype)
+
+    f = fun_wrapped(x, y, p)
+    if f.shape != y.shape:
+        raise ValueError(f"`fun` return is expected to have shape {y.shape}, "
+                         f"but actually has {f.shape}.")
+
+    bc_res = bc_wrapped(y[:, 0], y[:, -1], p)
+    if bc_res.shape != (n + k,):
+        raise ValueError(f"`bc` return is expected to have shape {(n + k,)}, "
+                         f"but actually has {bc_res.shape}.")
+
+    status = 0
+    iteration = 0
+    if verbose == 2:
+        print_iteration_header()
+
+    while True:
+        m = x.shape[0]
+
+        col_fun, jac_sys = prepare_sys(n, m, k, fun_wrapped, bc_wrapped,
+                                       fun_jac_wrapped, bc_jac_wrapped, x, h)
+        y, p, singular = solve_newton(n, m, h, col_fun, bc_wrapped, jac_sys,
+                                      y, p, B, tol, bc_tol)
+        iteration += 1
+
+        col_res, y_middle, f, f_middle = collocation_fun(fun_wrapped, y,
+                                                         p, x, h)
+        bc_res = bc_wrapped(y[:, 0], y[:, -1], p)
+        max_bc_res = np.max(abs(bc_res))
+
+        # This relation is not trivial, but can be verified.
+        r_middle = 1.5 * col_res / h
+        sol = create_spline(y, f, x, h)
+        rms_res = estimate_rms_residuals(fun_wrapped, sol, x, h, p,
+                                         r_middle, f_middle)
+        max_rms_res = np.max(rms_res)
+
+        if singular:
+            status = 2
+            break
+
+        insert_1, = np.nonzero((rms_res > tol) & (rms_res < 100 * tol))
+        insert_2, = np.nonzero(rms_res >= 100 * tol)
+        nodes_added = insert_1.shape[0] + 2 * insert_2.shape[0]
+
+        if m + nodes_added > max_nodes:
+            status = 1
+            if verbose == 2:
+                nodes_added = f"({nodes_added})"
+                print_iteration_progress(iteration, max_rms_res, max_bc_res,
+                                         m, nodes_added)
+            break
+
+        if verbose == 2:
+            print_iteration_progress(iteration, max_rms_res, max_bc_res, m,
+                                     nodes_added)
+
+        if nodes_added > 0:
+            x = modify_mesh(x, insert_1, insert_2)
+            h = np.diff(x)
+            y = sol(x)
+        elif max_bc_res <= bc_tol:
+            status = 0
+            break
+        elif iteration >= max_iteration:
+            status = 3
+            break
+
+    if verbose > 0:
+        if status == 0:
+            print(f"Solved in {iteration} iterations, number of nodes {x.shape[0]}. \n"
+                  f"Maximum relative residual: {max_rms_res:.2e} \n"
+                  f"Maximum boundary residual: {max_bc_res:.2e}")
+        elif status == 1:
+            print(f"Number of nodes is exceeded after iteration {iteration}. \n"
+                  f"Maximum relative residual: {max_rms_res:.2e} \n"
+                  f"Maximum boundary residual: {max_bc_res:.2e}")
+        elif status == 2:
+            print("Singular Jacobian encountered when solving the collocation "
+                  f"system on iteration {iteration}. \n"
+                  f"Maximum relative residual: {max_rms_res:.2e} \n"
+                  f"Maximum boundary residual: {max_bc_res:.2e}")
+        elif status == 3:
+            print("The solver was unable to satisfy boundary conditions "
+                  f"tolerance on iteration {iteration}. \n"
+                  f"Maximum relative residual: {max_rms_res:.2e} \n"
+                  f"Maximum boundary residual: {max_bc_res:.2e}")
+
+    if p.size == 0:
+        p = None
+
+    return BVPResult(sol=sol, p=p, x=x, y=y, yp=f, rms_residuals=rms_res,
+                     niter=iteration, status=status,
+                     message=TERMINATION_MESSAGES[status], success=status == 0)

.venv_haddock/lib/python3.12/site-packages/scipy/integrate/_cubature.py

@@ -0,0 +1,731 @@
+import math
+import heapq
+import itertools
+
+from dataclasses import dataclass, field
+from types import ModuleType
+from typing import Any, TypeAlias
+
+from scipy._lib._array_api import (
+    array_namespace,
+    xp_size,
+    xp_copy,
+    xp_promote,
+    xp_capabilities
+)
+from scipy._lib._util import MapWrapper
+
+from scipy.integrate._rules import (
+    ProductNestedFixed,
+    GaussKronrodQuadrature,
+    GenzMalikCubature,
+)
+from scipy.integrate._rules._base import _split_subregion
+
+__all__ = ['cubature']
+
+Array: TypeAlias = Any  # To be changed to an array-api-typing Protocol later
+
+
+@dataclass
+class CubatureRegion:
+    estimate: Array
+    error: Array
+    a: Array
+    b: Array
+    _xp: ModuleType = field(repr=False)
+
+    def __lt__(self, other):
+        # Consider regions with higher error estimates as being "less than" regions with
+        # lower order estimates, so that regions with high error estimates are placed at
+        # the top of the heap.
+
+        this_err = self._xp.max(self._xp.abs(self.error))
+        other_err = self._xp.max(self._xp.abs(other.error))
+
+        return this_err > other_err
+
+
+@dataclass
+class CubatureResult:
+    estimate: Array
+    error: Array
+    status: str
+    regions: list[CubatureRegion]
+    subdivisions: int
+    atol: float
+    rtol: float
+
+
+@xp_capabilities(allow_dask_compute=True, jax_jit=False)
+def cubature(f, a, b, *, rule="gk21", rtol=1e-8, atol=0, max_subdivisions=10000,
+             args=(), workers=1, points=None):
+    r"""
+    Adaptive cubature of multidimensional array-valued function.
+
+    Given an arbitrary integration rule, this function returns an estimate of the
+    integral to the requested tolerance over the region defined by the arrays `a` and
+    `b` specifying the corners of a hypercube.
+
+    Convergence is not guaranteed for all integrals.
+
+    Parameters
+    ----------
+    f : callable
+        Function to integrate. `f` must have the signature::
+
+            f(x : ndarray, *args) -> ndarray
+
+        `f` should accept arrays ``x`` of shape::
+
+            (npoints, ndim)
+
+        and output arrays of shape::
+
+            (npoints, output_dim_1, ..., output_dim_n)
+
+        In this case, `cubature` will return arrays of shape::
+
+            (output_dim_1, ..., output_dim_n)
+    a, b : array_like
+        Lower and upper limits of integration as 1D arrays specifying the left and right
+        endpoints of the intervals being integrated over. Limits can be infinite.
+    rule : str, optional
+        Rule used to estimate the integral. If passing a string, the options are
+        "gauss-kronrod" (21 node), or "genz-malik" (degree 7). If a rule like
+        "gauss-kronrod" is specified for an ``n``-dim integrand, the corresponding
+        Cartesian product rule is used. "gk21", "gk15" are also supported for
+        compatibility with `quad_vec`. See Notes.
+    rtol, atol : float, optional
+        Relative and absolute tolerances. Iterations are performed until the error is
+        estimated to be less than ``atol + rtol * abs(est)``. Here `rtol` controls
+        relative accuracy (number of correct digits), while `atol` controls absolute
+        accuracy (number of correct decimal places). To achieve the desired `rtol`, set
+        `atol` to be smaller than the smallest value that can be expected from
+        ``rtol * abs(y)`` so that `rtol` dominates the allowable error. If `atol` is
+        larger than ``rtol * abs(y)`` the number of correct digits is not guaranteed.
+        Conversely, to achieve the desired `atol`, set `rtol` such that
+        ``rtol * abs(y)`` is always smaller than `atol`. Default values are 1e-8 for
+        `rtol` and 0 for `atol`.
+    max_subdivisions : int, optional
+        Upper bound on the number of subdivisions to perform. Default is 10,000.
+    args : tuple, optional
+        Additional positional args passed to `f`, if any.
+    workers : int or map-like callable, optional
+        If `workers` is an integer, part of the computation is done in parallel
+        subdivided to this many tasks (using :class:`python:multiprocessing.pool.Pool`).
+        Supply `-1` to use all cores available to the Process. Alternatively, supply a
+        map-like callable, such as :meth:`python:multiprocessing.pool.Pool.map` for
+        evaluating the population in parallel. This evaluation is carried out as
+        ``workers(func, iterable)``.
+    points : list of array_like, optional
+        List of points to avoid evaluating `f` at, under the condition that the rule
+        being used does not evaluate `f` on the boundary of a region (which is the
+        case for all Genz-Malik and Gauss-Kronrod rules). This can be useful if `f` has
+        a singularity at the specified point. This should be a list of array-likes where
+        each element has length ``ndim``. Default is empty. See Examples.
+
+    Returns
+    -------
+    res : object
+        Object containing the results of the estimation. It has the following
+        attributes:
+
+        estimate : ndarray
+            Estimate of the value of the integral over the overall region specified.
+        error : ndarray
+            Estimate of the error of the approximation over the overall region
+            specified.
+        status : str
+            Whether the estimation was successful. Can be either: "converged",
+            "not_converged".
+        subdivisions : int
+            Number of subdivisions performed.
+        atol, rtol : float
+            Requested tolerances for the approximation.
+        regions: list of object
+            List of objects containing the estimates of the integral over smaller
+            regions of the domain.
+
+        Each object in ``regions`` has the following attributes:
+
+        a, b : ndarray
+            Points describing the corners of the region. If the original integral
+            contained infinite limits or was over a region described by `region`,
+            then `a` and `b` are in the transformed coordinates.
+        estimate : ndarray
+            Estimate of the value of the integral over this region.
+        error : ndarray
+            Estimate of the error of the approximation over this region.
+
+    Notes
+    -----
+    The algorithm uses a similar algorithm to `quad_vec`, which itself is based on the
+    implementation of QUADPACK's DQAG* algorithms, implementing global error control and
+    adaptive subdivision.
+
+    The source of the nodes and weights used for Gauss-Kronrod quadrature can be found
+    in [1]_, and the algorithm for calculating the nodes and weights in Genz-Malik
+    cubature can be found in [2]_.
+
+    The rules currently supported via the `rule` argument are:
+
+    - ``"gauss-kronrod"``, 21-node Gauss-Kronrod
+    - ``"genz-malik"``, n-node Genz-Malik
+
+    If using Gauss-Kronrod for an ``n``-dim integrand where ``n > 2``, then the
+    corresponding Cartesian product rule will be found by taking the Cartesian product
+    of the nodes in the 1D case. This means that the number of nodes scales
+    exponentially as ``21^n`` in the Gauss-Kronrod case, which may be problematic in a
+    moderate number of dimensions.
+
+    Genz-Malik is typically less accurate than Gauss-Kronrod but has much fewer nodes,
+    so in this situation using "genz-malik" might be preferable.
+
+    Infinite limits are handled with an appropriate variable transformation. Assuming
+    ``a = [a_1, ..., a_n]`` and ``b = [b_1, ..., b_n]``:
+
+    If :math:`a_i = -\infty` and :math:`b_i = \infty`, the i-th integration variable
+    will use the transformation :math:`x = \frac{1-|t|}{t}` and :math:`t \in (-1, 1)`.
+
+    If :math:`a_i \ne \pm\infty` and :math:`b_i = \infty`, the i-th integration variable
+    will use the transformation :math:`x = a_i + \frac{1-t}{t}` and
+    :math:`t \in (0, 1)`.
+
+    If :math:`a_i = -\infty` and :math:`b_i \ne \pm\infty`, the i-th integration
+    variable will use the transformation :math:`x = b_i - \frac{1-t}{t}` and
+    :math:`t \in (0, 1)`.
+
+    References
+    ----------
+    .. [1] R. Piessens, E. de Doncker, Quadpack: A Subroutine Package for Automatic
+        Integration, files: dqk21.f, dqk15.f (1983).
+
+    .. [2] A.C. Genz, A.A. Malik, Remarks on algorithm 006: An adaptive algorithm for
+        numerical integration over an N-dimensional rectangular region, Journal of
+        Computational and Applied Mathematics, Volume 6, Issue 4, 1980, Pages 295-302,
+        ISSN 0377-0427
+        :doi:`10.1016/0771-050X(80)90039-X`
+
+    Examples
+    --------
+    **1D integral with vector output**:
+
+    .. math::
+
+        \int^1_0 \mathbf f(x) \text dx
+
+    Where ``f(x) = x^n`` and ``n = np.arange(10)`` is a vector. Since no rule is
+    specified, the default "gk21" is used, which corresponds to Gauss-Kronrod
+    integration with 21 nodes.
+
+    >>> import numpy as np
+    >>> from scipy.integrate import cubature
+    >>> def f(x, n):
+    ...    # Make sure x and n are broadcastable
+    ...    return x[:, np.newaxis]**n[np.newaxis, :]
+    >>> res = cubature(
+    ...     f,
+    ...     a=[0],
+    ...     b=[1],
+    ...     args=(np.arange(10),),
+    ... )
+    >>> res.estimate
+     array([1.        , 0.5       , 0.33333333, 0.25      , 0.2       ,
+            0.16666667, 0.14285714, 0.125     , 0.11111111, 0.1       ])
+
+    **7D integral with arbitrary-shaped array output**::
+
+        f(x) = cos(2*pi*r + alphas @ x)
+
+    for some ``r`` and ``alphas``, and the integral is performed over the unit
+    hybercube, :math:`[0, 1]^7`. Since the integral is in a moderate number of
+    dimensions, "genz-malik" is used rather than the default "gauss-kronrod" to
+    avoid constructing a product rule with :math:`21^7 \approx 2 \times 10^9` nodes.
+
+    >>> import numpy as np
+    >>> from scipy.integrate import cubature
+    >>> def f(x, r, alphas):
+    ...     # f(x) = cos(2*pi*r + alphas @ x)
+    ...     # Need to allow r and alphas to be arbitrary shape
+    ...     npoints, ndim = x.shape[0], x.shape[-1]
+    ...     alphas = alphas[np.newaxis, ...]
+    ...     x = x.reshape(npoints, *([1]*(len(alphas.shape) - 1)), ndim)
+    ...     return np.cos(2*np.pi*r + np.sum(alphas * x, axis=-1))
+    >>> rng = np.random.default_rng()
+    >>> r, alphas = rng.random((2, 3)), rng.random((2, 3, 7))
+    >>> res = cubature(
+    ...     f=f,
+    ...     a=np.array([0, 0, 0, 0, 0, 0, 0]),
+    ...     b=np.array([1, 1, 1, 1, 1, 1, 1]),
+    ...     rtol=1e-5,
+    ...     rule="genz-malik",
+    ...     args=(r, alphas),
+    ... )
+    >>> res.estimate
+     array([[-0.79812452,  0.35246913, -0.52273628],
+            [ 0.88392779,  0.59139899,  0.41895111]])
+
+    **Parallel computation with** `workers`:
+
+    >>> from concurrent.futures import ThreadPoolExecutor
+    >>> with ThreadPoolExecutor() as executor:
+    ...     res = cubature(
+    ...         f=f,
+    ...         a=np.array([0, 0, 0, 0, 0, 0, 0]),
+    ...         b=np.array([1, 1, 1, 1, 1, 1, 1]),
+    ...         rtol=1e-5,
+    ...         rule="genz-malik",
+    ...         args=(r, alphas),
+    ...         workers=executor.map,
+    ...      )
+    >>> res.estimate
+     array([[-0.79812452,  0.35246913, -0.52273628],
+            [ 0.88392779,  0.59139899,  0.41895111]])
+
+    **2D integral with infinite limits**:
+
+    .. math::
+
+        \int^{ \infty }_{ -\infty }
+        \int^{ \infty }_{ -\infty }
+            e^{-x^2-y^2}
+        \text dy
+        \text dx
+
+    >>> def gaussian(x):
+    ...     return np.exp(-np.sum(x**2, axis=-1))
+    >>> res = cubature(gaussian, [-np.inf, -np.inf], [np.inf, np.inf])
+    >>> res.estimate
+     3.1415926
+
+    **1D integral with singularities avoided using** `points`:
+
+    .. math::
+
+        \int^{ 1 }_{ -1 }
+          \frac{\sin(x)}{x}
+        \text dx
+
+    It is necessary to use the `points` parameter to avoid evaluating `f` at the origin.
+
+    >>> def sinc(x):
+    ...     return np.sin(x)/x
+    >>> res = cubature(sinc, [-1], [1], points=[[0]])
+    >>> res.estimate
+     1.8921661
+    """
+
+    # It is also possible to use a custom rule, but this is not yet part of the public
+    # API. An example of this can be found in the class scipy.integrate._rules.Rule.
+
+    xp = array_namespace(a, b)
+    max_subdivisions = float("inf") if max_subdivisions is None else max_subdivisions
+    points = [] if points is None else points
+
+    # Convert a and b to arrays and convert each point in points to an array, promoting
+    # each to a common floating dtype.
+    a, b, *points = xp_promote(a, b, *points, broadcast=True, force_floating=True,
+                               xp=xp)
+    result_dtype = a.dtype
+
+    if xp_size(a) == 0 or xp_size(b) == 0:
+        raise ValueError("`a` and `b` must be nonempty")
+
+    if a.ndim != 1 or b.ndim != 1:
+        raise ValueError("`a` and `b` must be 1D arrays")
+
+    # If the rule is a string, convert to a corresponding product rule
+    if isinstance(rule, str):
+        ndim = xp_size(a)
+
+        if rule == "genz-malik":
+            rule = GenzMalikCubature(ndim, xp=xp)
+        else:
+            quadratues = {
+                "gauss-kronrod": GaussKronrodQuadrature(21, xp=xp),
+
+                # Also allow names quad_vec uses:
+                "gk21": GaussKronrodQuadrature(21, xp=xp),
+                "gk15": GaussKronrodQuadrature(15, xp=xp),
+            }
+
+            base_rule = quadratues.get(rule)
+
+            if base_rule is None:
+                raise ValueError(f"unknown rule {rule}")
+
+            rule = ProductNestedFixed([base_rule] * ndim)
+
+    # If any of limits are the wrong way around (a > b), flip them and keep track of
+    # the sign.
+    sign = (-1) ** xp.sum(xp.astype(a > b, xp.int8), dtype=result_dtype)
+
+    a_flipped = xp.min(xp.stack([a, b]), axis=0)
+    b_flipped = xp.max(xp.stack([a, b]), axis=0)
+
+    a, b = a_flipped, b_flipped
+
+    # If any of the limits are infinite, apply a transformation
+    if xp.any(xp.isinf(a)) or xp.any(xp.isinf(b)):
+        f = _InfiniteLimitsTransform(f, a, b, xp=xp)
+        a, b = f.transformed_limits
+
+        # Map points from the original coordinates to the new transformed coordinates.
+        #
+        # `points` is a list of arrays of shape (ndim,), but transformations are applied
+        # to arrays of shape (npoints, ndim).
+        #
+        # It is not possible to combine all the points into one array and then apply
+        # f.inv to all of them at once since `points` needs to remain iterable.
+        # Instead, each point is reshaped to an array of shape (1, ndim), `f.inv` is
+        # applied, and then each is reshaped back to (ndim,).
+        points = [xp.reshape(point, (1, -1)) for point in points]
+        points = [f.inv(point) for point in points]
+        points = [xp.reshape(point, (-1,)) for point in points]
+
+        # Include any problematic points introduced by the transformation
+        points.extend(f.points)
+
+    # If any problematic points are specified, divide the initial region so that these
+    # points lie on the edge of a subregion.
+    #
+    # This means ``f`` won't be evaluated there if the rule being used has no evaluation
+    # points on the boundary.
+    if len(points) == 0:
+        initial_regions = [(a, b)]
+    else:
+        initial_regions = _split_region_at_points(a, b, points, xp)
+
+    regions = []
+    est = 0.0
+    err = 0.0
+
+    for a_k, b_k in initial_regions:
+        est_k = rule.estimate(f, a_k, b_k, args)
+        err_k = rule.estimate_error(f, a_k, b_k, args)
+        regions.append(CubatureRegion(est_k, err_k, a_k, b_k, xp))
+
+        est += est_k
+        err += err_k
+
+    subdivisions = 0
+    success = True
+
+    with MapWrapper(workers) as mapwrapper:
+        while xp.any(err > atol + rtol * xp.abs(est)):
+            # region_k is the region with highest estimated error
+            region_k = heapq.heappop(regions)
+
+            est_k = region_k.estimate
+            err_k = region_k.error
+
+            a_k, b_k = region_k.a, region_k.b
+
+            # Subtract the estimate of the integral and its error over this region from
+            # the current global estimates, since these will be refined in the loop over
+            # all subregions.
+            est -= est_k
+            err -= err_k
+
+            # Find all 2^ndim subregions formed by splitting region_k along each axis,
+            # e.g. for 1D integrals this splits an estimate over an interval into an
+            # estimate over two subintervals, for 3D integrals this splits an estimate
+            # over a cube into 8 subcubes.
+            #
+            # For each of the new subregions, calculate an estimate for the integral and
+            # the error there, and push these regions onto the heap for potential
+            # further subdividing.
+
+            executor_args = zip(
+                itertools.repeat(f),
+                itertools.repeat(rule),
+                itertools.repeat(args),
+                _split_subregion(a_k, b_k, xp),
+            )
+
+            for subdivision_result in mapwrapper(_process_subregion, executor_args):
+                a_k_sub, b_k_sub, est_sub, err_sub = subdivision_result
+
+                est += est_sub
+                err += err_sub
+
+                new_region = CubatureRegion(est_sub, err_sub, a_k_sub, b_k_sub, xp)
+
+                heapq.heappush(regions, new_region)
+
+            subdivisions += 1
+
+            if subdivisions >= max_subdivisions:
+                success = False
+                break
+
+        status = "converged" if success else "not_converged"
+
+        # Apply sign change to handle any limits which were initially flipped.
+        est = sign * est
+
+        return CubatureResult(
+            estimate=est,
+            error=err,
+            status=status,
+            subdivisions=subdivisions,
+            regions=regions,
+            atol=atol,
+            rtol=rtol,
+        )
+
+
+def _process_subregion(data):
+    f, rule, args, coord = data
+    a_k_sub, b_k_sub = coord
+
+    est_sub = rule.estimate(f, a_k_sub, b_k_sub, args)
+    err_sub = rule.estimate_error(f, a_k_sub, b_k_sub, args)
+
+    return a_k_sub, b_k_sub, est_sub, err_sub
+
+
+def _is_strictly_in_region(a, b, point, xp):
+    if xp.all(point == a) or xp.all(point == b):
+        return False
+
+    return xp.all(a <= point) and xp.all(point <= b)
+
+
+def _split_region_at_points(a, b, points, xp):
+    """
+    Given the integration limits `a` and `b` describing a rectangular region and a list
+    of `points`, find the list of ``[(a_1, b_1), ..., (a_l, b_l)]`` which breaks up the
+    initial region into smaller subregion such that no `points` lie strictly inside
+    any of the subregions.
+    """
+
+    regions = [(a, b)]
+
+    for point in points:
+        if xp.any(xp.isinf(point)):
+            # If a point is specified at infinity, ignore.
+            #
+            # This case occurs when points are given by the user to avoid, but after
+            # applying a transformation, they are removed.
+            continue
+
+        new_subregions = []
+
+        for a_k, b_k in regions:
+            if _is_strictly_in_region(a_k, b_k, point, xp):
+                subregions = _split_subregion(a_k, b_k, xp, point)
+
+                for left, right in subregions:
+                    # Skip any zero-width regions.
+                    if xp.any(left == right):
+                        continue
+                    else:
+                        new_subregions.append((left, right))
+
+                new_subregions.extend(subregions)
+
+            else:
+                new_subregions.append((a_k, b_k))
+
+        regions = new_subregions
+
+    return regions
+
+
+class _VariableTransform:
+    """
+    A transformation that can be applied to an integral.
+    """
+
+    @property
+    def transformed_limits(self):
+        """
+        New limits of integration after applying the transformation.
+        """
+
+        raise NotImplementedError
+
+    @property
+    def points(self):
+        """
+        Any problematic points introduced by the transformation.
+
+        These should be specified as points where ``_VariableTransform(f)(self, point)``
+        would be problematic.
+
+        For example, if the transformation ``x = 1/((1-t)(1+t))`` is applied to a
+        univariate integral, then points should return ``[ [1], [-1] ]``.
+        """
+
+        return []
+
+    def inv(self, x):
+        """
+        Map points ``x`` to ``t`` such that if ``f`` is the original function and ``g``
+        is the function after the transformation is applied, then::
+
+            f(x) = g(self.inv(x))
+        """
+
+        raise NotImplementedError
+
+    def __call__(self, t, *args, **kwargs):
+        """
+        Apply the transformation to ``f`` and multiply by the Jacobian determinant.
+        This should be the new integrand after the transformation has been applied so
+        that the following is satisfied::
+
+            f_transformed = _VariableTransform(f)
+
+            cubature(f, a, b) == cubature(
+                f_transformed,
+                *f_transformed.transformed_limits(a, b),
+            )
+        """
+
+        raise NotImplementedError
+
+
+class _InfiniteLimitsTransform(_VariableTransform):
+    r"""
+    Transformation for handling infinite limits.
+
+    Assuming ``a = [a_1, ..., a_n]`` and ``b = [b_1, ..., b_n]``:
+
+    If :math:`a_i = -\infty` and :math:`b_i = \infty`, the i-th integration variable
+    will use the transformation :math:`x = \frac{1-|t|}{t}` and :math:`t \in (-1, 1)`.
+
+    If :math:`a_i \ne \pm\infty` and :math:`b_i = \infty`, the i-th integration variable
+    will use the transformation :math:`x = a_i + \frac{1-t}{t}` and
+    :math:`t \in (0, 1)`.
+
+    If :math:`a_i = -\infty` and :math:`b_i \ne \pm\infty`, the i-th integration
+    variable will use the transformation :math:`x = b_i - \frac{1-t}{t}` and
+    :math:`t \in (0, 1)`.
+    """
+
+    def __init__(self, f, a, b, xp):
+        self._xp = xp
+
+        self._f = f
+        self._orig_a = a
+        self._orig_b = b
+
+        # (-oo, oo) will be mapped to (-1, 1).
+        self._double_inf_pos = (a == -math.inf) & (b == math.inf)
+
+        # (start, oo) will be mapped to (0, 1).
+        start_inf_mask = (a != -math.inf) & (b == math.inf)
+
+        # (-oo, end) will be mapped to (0, 1).
+        inf_end_mask = (a == -math.inf) & (b != math.inf)
+
+        # This is handled by making the transformation t = -x and reducing it to
+        # the other semi-infinite case.
+        self._semi_inf_pos = start_inf_mask | inf_end_mask
+
+        # Since we flip the limits, we don't need to separately multiply the
+        # integrand by -1.
+        self._orig_a[inf_end_mask] = -b[inf_end_mask]
+        self._orig_b[inf_end_mask] = -a[inf_end_mask]
+
+        self._num_inf = self._xp.sum(
+            self._xp.astype(self._double_inf_pos | self._semi_inf_pos, self._xp.int64),
+        ).__int__()
+
+    @property
+    def transformed_limits(self):
+        a = xp_copy(self._orig_a)
+        b = xp_copy(self._orig_b)
+
+        a[self._double_inf_pos] = -1
+        b[self._double_inf_pos] = 1
+
+        a[self._semi_inf_pos] = 0
+        b[self._semi_inf_pos] = 1
+
+        return a, b
+
+    @property
+    def points(self):
+        # If there are infinite limits, then the origin becomes a problematic point
+        # due to a division by zero there.
+
+        # If the function using this class only wraps f when a and b contain infinite
+        # limits, this condition will always be met (as is the case with cubature).
+        #
+        # If a and b do not contain infinite limits but f is still wrapped with this
+        # class, then without this condition the initial region of integration will
+        # be split around the origin unnecessarily.
+        if self._num_inf != 0:
+            return [self._xp.zeros(self._orig_a.shape)]
+        else:
+            return []
+
+    def inv(self, x):
+        t = xp_copy(x)
+        npoints = x.shape[0]
+
+        double_inf_mask = self._xp.tile(
+            self._double_inf_pos[self._xp.newaxis, :],
+            (npoints, 1),
+        )
+
+        semi_inf_mask = self._xp.tile(
+            self._semi_inf_pos[self._xp.newaxis, :],
+            (npoints, 1),
+        )
+
+        # If any components of x are 0, then this component will be mapped to infinity
+        # under the transformation used for doubly-infinite limits.
+        #
+        # Handle the zero values and non-zero values separately to avoid division by
+        # zero.
+        zero_mask = x[double_inf_mask] == 0
+        non_zero_mask = double_inf_mask & ~zero_mask
+        t[zero_mask] = math.inf
+        t[non_zero_mask] = 1/(x[non_zero_mask] + self._xp.sign(x[non_zero_mask]))
+
+        start = self._xp.tile(self._orig_a[self._semi_inf_pos], (npoints,))
+        t[semi_inf_mask] = 1/(x[semi_inf_mask] - start + 1)
+
+        return t
+
+    def __call__(self, t, *args, **kwargs):
+        x = xp_copy(t)
+        npoints = t.shape[0]
+
+        double_inf_mask = self._xp.tile(
+            self._double_inf_pos[self._xp.newaxis, :],
+            (npoints, 1),
+        )
+
+        semi_inf_mask = self._xp.tile(
+            self._semi_inf_pos[self._xp.newaxis, :],
+            (npoints, 1),
+        )
+
+        # For (-oo, oo) -> (-1, 1), use the transformation x = (1-|t|)/t.
+        x[double_inf_mask] = (
+            (1 - self._xp.abs(t[double_inf_mask])) / t[double_inf_mask]
+        )
+
+        start = self._xp.tile(self._orig_a[self._semi_inf_pos], (npoints,))
+
+        # For (start, oo) -> (0, 1), use the transformation x = start + (1-t)/t.
+        x[semi_inf_mask] = start + (1 - t[semi_inf_mask]) / t[semi_inf_mask]
+
+        jacobian_det = 1/self._xp.prod(
+            self._xp.reshape(
+                t[semi_inf_mask | double_inf_mask]**2,
+                (-1, self._num_inf),
+            ),
+            axis=-1,
+        )
+
+        f_x = self._f(x, *args, **kwargs)
+        jacobian_det = self._xp.reshape(jacobian_det, (-1, *([1]*(len(f_x.shape) - 1))))
+
+        return f_x * jacobian_det

.venv_haddock/lib/python3.12/site-packages/scipy/integrate/_ivp/__init__.py

@@ -0,0 +1,8 @@
+"""Suite of ODE solvers implemented in Python."""
+from .ivp import solve_ivp
+from .rk import RK23, RK45, DOP853
+from .radau import Radau
+from .bdf import BDF
+from .lsoda import LSODA
+from .common import OdeSolution
+from .base import DenseOutput, OdeSolver

.venv_haddock/lib/python3.12/site-packages/scipy/integrate/_ivp/base.py

@@ -0,0 +1,298 @@
+from types import GenericAlias
+import numpy as np
+
+
+def check_arguments(fun, y0, support_complex):
+    """Helper function for checking arguments common to all solvers."""
+    y0 = np.asarray(y0)
+    if np.issubdtype(y0.dtype, np.complexfloating):
+        if not support_complex:
+            raise ValueError("`y0` is complex, but the chosen solver does "
+                             "not support integration in a complex domain.")
+        dtype = complex
+    else:
+        dtype = float
+    y0 = y0.astype(dtype, copy=False)
+
+    if y0.ndim != 1:
+        raise ValueError("`y0` must be 1-dimensional.")
+
+    if not np.isfinite(y0).all():
+        raise ValueError("All components of the initial state `y0` must be finite.")
+
+    def fun_wrapped(t, y):
+        return np.asarray(fun(t, y), dtype=dtype)
+
+    return fun_wrapped, y0
+
+
+class OdeSolver:
+    """Base class for ODE solvers.
+
+    In order to implement a new solver you need to follow the guidelines:
+
+        1. A constructor must accept parameters presented in the base class
+           (listed below) along with any other parameters specific to a solver.
+        2. A constructor must accept arbitrary extraneous arguments
+           ``**extraneous``, but warn that these arguments are irrelevant
+           using `common.warn_extraneous` function. Do not pass these
+           arguments to the base class.
+        3. A solver must implement a private method `_step_impl(self)` which
+           propagates a solver one step further. It must return tuple
+           ``(success, message)``, where ``success`` is a boolean indicating
+           whether a step was successful, and ``message`` is a string
+           containing description of a failure if a step failed or None
+           otherwise.
+        4. A solver must implement a private method `_dense_output_impl(self)`,
+           which returns a `DenseOutput` object covering the last successful
+           step.
+        5. A solver must have attributes listed below in Attributes section.
+           Note that ``t_old`` and ``step_size`` are updated automatically.
+        6. Use `fun(self, t, y)` method for the system rhs evaluation, this
+           way the number of function evaluations (`nfev`) will be tracked
+           automatically.
+        7. For convenience, a base class provides `fun_single(self, t, y)` and
+           `fun_vectorized(self, t, y)` for evaluating the rhs in
+           non-vectorized and vectorized fashions respectively (regardless of
+           how `fun` from the constructor is implemented). These calls don't
+           increment `nfev`.
+        8. If a solver uses a Jacobian matrix and LU decompositions, it should
+           track the number of Jacobian evaluations (`njev`) and the number of
+           LU decompositions (`nlu`).
+        9. By convention, the function evaluations used to compute a finite
+           difference approximation of the Jacobian should not be counted in
+           `nfev`, thus use `fun_single(self, t, y)` or
+           `fun_vectorized(self, t, y)` when computing a finite difference
+           approximation of the Jacobian.
+
+    Parameters
+    ----------
+    fun : callable
+        Right-hand side of the system: the time derivative of the state ``y``
+        at time ``t``. The calling signature is ``fun(t, y)``, where ``t`` is a
+        scalar and ``y`` is an ndarray with ``len(y) = len(y0)``. ``fun`` must
+        return an array of the same shape as ``y``. See `vectorized` for more
+        information.
+    t0 : float
+        Initial time.
+    y0 : array_like, shape (n,)
+        Initial state.
+    t_bound : float
+        Boundary time --- the integration won't continue beyond it. It also
+        determines the direction of the integration.
+    vectorized : bool
+        Whether `fun` can be called in a vectorized fashion. Default is False.
+
+        If ``vectorized`` is False, `fun` will always be called with ``y`` of
+        shape ``(n,)``, where ``n = len(y0)``.
+
+        If ``vectorized`` is True, `fun` may be called with ``y`` of shape
+        ``(n, k)``, where ``k`` is an integer. In this case, `fun` must behave
+        such that ``fun(t, y)[:, i] == fun(t, y[:, i])`` (i.e. each column of
+        the returned array is the time derivative of the state corresponding
+        with a column of ``y``).
+
+        Setting ``vectorized=True`` allows for faster finite difference
+        approximation of the Jacobian by methods 'Radau' and 'BDF', but
+        will result in slower execution for other methods. It can also
+        result in slower overall execution for 'Radau' and 'BDF' in some
+        circumstances (e.g. small ``len(y0)``).
+    support_complex : bool, optional
+        Whether integration in a complex domain should be supported.
+        Generally determined by a derived solver class capabilities.
+        Default is False.
+
+    Attributes
+    ----------
+    n : int
+        Number of equations.
+    status : string
+        Current status of the solver: 'running', 'finished' or 'failed'.
+    t_bound : float
+        Boundary time.
+    direction : float
+        Integration direction: +1 or -1.
+    t : float
+        Current time.
+    y : ndarray
+        Current state.
+    t_old : float
+        Previous time. None if no steps were made yet.
+    step_size : float
+        Size of the last successful step. None if no steps were made yet.
+    nfev : int
+        Number of the system's rhs evaluations.
+    njev : int
+        Number of the Jacobian evaluations.
+    nlu : int
+        Number of LU decompositions.
+    """
+    TOO_SMALL_STEP = "Required step size is less than spacing between numbers."
+
+    # generic type compatibility with scipy-stubs
+    __class_getitem__ = classmethod(GenericAlias)
+
+    def __init__(self, fun, t0, y0, t_bound, vectorized,
+                 support_complex=False):
+        self.t_old = None
+        self.t = t0
+        self._fun, self.y = check_arguments(fun, y0, support_complex)
+        self.t_bound = t_bound
+        self.vectorized = vectorized
+
+        if vectorized:
+            def fun_single(t, y):
+                return self._fun(t, y[:, None]).ravel()
+            fun_vectorized = self._fun
+        else:
+            fun_single = self._fun
+
+            def fun_vectorized(t, y):
+                f = np.empty_like(y)
+                for i, yi in enumerate(y.T):
+                    f[:, i] = self._fun(t, yi)
+                return f
+
+        def fun(t, y):
+            self.nfev += 1
+            return self.fun_single(t, y)
+
+        self.fun = fun
+        self.fun_single = fun_single
+        self.fun_vectorized = fun_vectorized
+
+        self.direction = np.sign(t_bound - t0) if t_bound != t0 else 1
+        self.n = self.y.size
+        self.status = 'running'
+
+        self.nfev = 0
+        self.njev = 0
+        self.nlu = 0
+
+    @property
+    def step_size(self):
+        if self.t_old is None:
+            return None
+        else:
+            return np.abs(self.t - self.t_old)
+
+    def step(self):
+        """Perform one integration step.
+
+        Returns
+        -------
+        message : string or None
+            Report from the solver. Typically a reason for a failure if
+            `self.status` is 'failed' after the step was taken or None
+            otherwise.
+        """
+        if self.status != 'running':
+            raise RuntimeError("Attempt to step on a failed or finished "
+                               "solver.")
+
+        if self.n == 0 or self.t == self.t_bound:
+            # Handle corner cases of empty solver or no integration.
+            self.t_old = self.t
+            self.t = self.t_bound
+            message = None
+            self.status = 'finished'
+        else:
+            t = self.t
+            success, message = self._step_impl()
+
+            if not success:
+                self.status = 'failed'
+            else:
+                self.t_old = t
+                if self.direction * (self.t - self.t_bound) >= 0:
+                    self.status = 'finished'
+
+        return message
+
+    def dense_output(self):
+        """Compute a local interpolant over the last successful step.
+
+        Returns
+        -------
+        sol : `DenseOutput`
+            Local interpolant over the last successful step.
+        """
+        if self.t_old is None:
+            raise RuntimeError("Dense output is available after a successful "
+                               "step was made.")
+
+        if self.n == 0 or self.t == self.t_old:
+            # Handle corner cases of empty solver and no integration.
+            return ConstantDenseOutput(self.t_old, self.t, self.y)
+        else:
+            return self._dense_output_impl()
+
+    def _step_impl(self):
+        raise NotImplementedError
+
+    def _dense_output_impl(self):
+        raise NotImplementedError
+
+
+class DenseOutput:
+    """Base class for local interpolant over step made by an ODE solver.
+
+    It interpolates between `t_min` and `t_max` (see Attributes below).
+    Evaluation outside this interval is not forbidden, but the accuracy is not
+    guaranteed.
+
+    Attributes
+    ----------
+    t_min, t_max : float
+        Time range of the interpolation.
+    """
+
+    # generic type compatibility with scipy-stubs
+    __class_getitem__ = classmethod(GenericAlias)
+
+    def __init__(self, t_old, t):
+        self.t_old = t_old
+        self.t = t
+        self.t_min = min(t, t_old)
+        self.t_max = max(t, t_old)
+
+    def __call__(self, t):
+        """Evaluate the interpolant.
+
+        Parameters
+        ----------
+        t : float or array_like with shape (n_points,)
+            Points to evaluate the solution at.
+
+        Returns
+        -------
+        y : ndarray, shape (n,) or (n, n_points)
+            Computed values. Shape depends on whether `t` was a scalar or a
+            1-D array.
+        """
+        t = np.asarray(t)
+        if t.ndim > 1:
+            raise ValueError("`t` must be a float or a 1-D array.")
+        return self._call_impl(t)
+
+    def _call_impl(self, t):
+        raise NotImplementedError
+
+
+class ConstantDenseOutput(DenseOutput):
+    """Constant value interpolator.
+
+    This class used for degenerate integration cases: equal integration limits
+    or a system with 0 equations.
+    """
+    def __init__(self, t_old, t, value):
+        super().__init__(t_old, t)
+        self.value = value
+
+    def _call_impl(self, t):
+        if t.ndim == 0:
+            return self.value
+        else:
+            ret = np.empty((self.value.shape[0], t.shape[0]))
+            ret[:] = self.value[:, None]
+            return ret

.venv_haddock/lib/python3.12/site-packages/scipy/integrate/_ivp/bdf.py

@@ -0,0 +1,479 @@
+import numpy as np
+from scipy.linalg import lu_factor, lu_solve
+from scipy.sparse import issparse, csc_matrix, eye
+from scipy.sparse.linalg import splu
+from scipy.optimize._numdiff import group_columns
+from .common import (validate_max_step, validate_tol, select_initial_step,
+                     norm, EPS, num_jac, validate_first_step,
+                     warn_extraneous)
+from .base import OdeSolver, DenseOutput
+
+
+MAX_ORDER = 5
+NEWTON_MAXITER = 4
+MIN_FACTOR = 0.2
+MAX_FACTOR = 10
+
+
+def compute_R(order, factor):
+    """Compute the matrix for changing the differences array."""
+    I = np.arange(1, order + 1)[:, None]
+    J = np.arange(1, order + 1)
+    M = np.zeros((order + 1, order + 1))
+    M[1:, 1:] = (I - 1 - factor * J) / I
+    M[0] = 1
+    return np.cumprod(M, axis=0)
+
+
+def change_D(D, order, factor):
+    """Change differences array in-place when step size is changed."""
+    R = compute_R(order, factor)
+    U = compute_R(order, 1)
+    RU = R.dot(U)
+    D[:order + 1] = np.dot(RU.T, D[:order + 1])
+
+
+def solve_bdf_system(fun, t_new, y_predict, c, psi, LU, solve_lu, scale, tol):
+    """Solve the algebraic system resulting from BDF method."""
+    d = 0
+    y = y_predict.copy()
+    dy_norm_old = None
+    converged = False
+    for k in range(NEWTON_MAXITER):
+        f = fun(t_new, y)
+        if not np.all(np.isfinite(f)):
+            break
+
+        dy = solve_lu(LU, c * f - psi - d)
+        dy_norm = norm(dy / scale)
+
+        if dy_norm_old is None:
+            rate = None
+        else:
+            rate = dy_norm / dy_norm_old
+
+        if (rate is not None and (rate >= 1 or
+                rate ** (NEWTON_MAXITER - k) / (1 - rate) * dy_norm > tol)):
+            break
+
+        y += dy
+        d += dy
+
+        if (dy_norm == 0 or
+                rate is not None and rate / (1 - rate) * dy_norm < tol):
+            converged = True
+            break
+
+        dy_norm_old = dy_norm
+
+    return converged, k + 1, y, d
+
+
+class BDF(OdeSolver):
+    """Implicit method based on backward-differentiation formulas.
+
+    This is a variable order method with the order varying automatically from
+    1 to 5. The general framework of the BDF algorithm is described in [1]_.
+    This class implements a quasi-constant step size as explained in [2]_.
+    The error estimation strategy for the constant-step BDF is derived in [3]_.
+    An accuracy enhancement using modified formulas (NDF) [2]_ is also implemented.
+
+    Can be applied in the complex domain.
+
+    Parameters
+    ----------
+    fun : callable
+        Right-hand side of the system: the time derivative of the state ``y``
+        at time ``t``. The calling signature is ``fun(t, y)``, where ``t`` is a
+        scalar and ``y`` is an ndarray with ``len(y) = len(y0)``. ``fun`` must
+        return an array of the same shape as ``y``. See `vectorized` for more
+        information.
+    t0 : float
+        Initial time.
+    y0 : array_like, shape (n,)
+        Initial state.
+    t_bound : float
+        Boundary time - the integration won't continue beyond it. It also
+        determines the direction of the integration.
+    first_step : float or None, optional
+        Initial step size. Default is ``None`` which means that the algorithm
+        should choose.
+    max_step : float, optional
+        Maximum allowed step size. Default is np.inf, i.e., the step size is not
+        bounded and determined solely by the solver.
+    rtol, atol : float and array_like, optional
+        Relative and absolute tolerances. The solver keeps the local error
+        estimates less than ``atol + rtol * abs(y)``. Here `rtol` controls a
+        relative accuracy (number of correct digits), while `atol` controls
+        absolute accuracy (number of correct decimal places). To achieve the
+        desired `rtol`, set `atol` to be smaller than the smallest value that
+        can be expected from ``rtol * abs(y)`` so that `rtol` dominates the
+        allowable error. If `atol` is larger than ``rtol * abs(y)`` the
+        number of correct digits is not guaranteed. Conversely, to achieve the
+        desired `atol` set `rtol` such that ``rtol * abs(y)`` is always smaller
+        than `atol`. If components of y have different scales, it might be
+        beneficial to set different `atol` values for different components by
+        passing array_like with shape (n,) for `atol`. Default values are
+        1e-3 for `rtol` and 1e-6 for `atol`.
+    jac : {None, array_like, sparse_matrix, callable}, optional
+        Jacobian matrix of the right-hand side of the system with respect to y,
+        required by this method. The Jacobian matrix has shape (n, n) and its
+        element (i, j) is equal to ``d f_i / d y_j``.
+        There are three ways to define the Jacobian:
+
+            * If array_like or sparse_matrix, the Jacobian is assumed to
+              be constant.
+            * If callable, the Jacobian is assumed to depend on both
+              t and y; it will be called as ``jac(t, y)`` as necessary.
+              For the 'Radau' and 'BDF' methods, the return value might be a
+              sparse matrix.
+            * If None (default), the Jacobian will be approximated by
+              finite differences.
+
+        It is generally recommended to provide the Jacobian rather than
+        relying on a finite-difference approximation.
+    jac_sparsity : {None, array_like, sparse matrix}, optional
+        Defines a sparsity structure of the Jacobian matrix for a
+        finite-difference approximation. Its shape must be (n, n). This argument
+        is ignored if `jac` is not `None`. If the Jacobian has only few non-zero
+        elements in *each* row, providing the sparsity structure will greatly
+        speed up the computations [4]_. A zero entry means that a corresponding
+        element in the Jacobian is always zero. If None (default), the Jacobian
+        is assumed to be dense.
+    vectorized : bool, optional
+        Whether `fun` can be called in a vectorized fashion. Default is False.
+
+        If ``vectorized`` is False, `fun` will always be called with ``y`` of
+        shape ``(n,)``, where ``n = len(y0)``.
+
+        If ``vectorized`` is True, `fun` may be called with ``y`` of shape
+        ``(n, k)``, where ``k`` is an integer. In this case, `fun` must behave
+        such that ``fun(t, y)[:, i] == fun(t, y[:, i])`` (i.e. each column of
+        the returned array is the time derivative of the state corresponding
+        with a column of ``y``).
+
+        Setting ``vectorized=True`` allows for faster finite difference
+        approximation of the Jacobian by this method, but may result in slower
+        execution overall in some circumstances (e.g. small ``len(y0)``).
+
+    Attributes
+    ----------
+    n : int
+        Number of equations.
+    status : string
+        Current status of the solver: 'running', 'finished' or 'failed'.
+    t_bound : float
+        Boundary time.
+    direction : float
+        Integration direction: +1 or -1.
+    t : float
+        Current time.
+    y : ndarray
+        Current state.
+    t_old : float
+        Previous time. None if no steps were made yet.
+    step_size : float
+        Size of the last successful step. None if no steps were made yet.
+    nfev : int
+        Number of evaluations of the right-hand side.
+    njev : int
+        Number of evaluations of the Jacobian.
+    nlu : int
+        Number of LU decompositions.
+
+    References
+    ----------
+    .. [1] G. D. Byrne, A. C. Hindmarsh, "A Polyalgorithm for the Numerical
+           Solution of Ordinary Differential Equations", ACM Transactions on
+           Mathematical Software, Vol. 1, No. 1, pp. 71-96, March 1975.
+    .. [2] L. F. Shampine, M. W. Reichelt, "THE MATLAB ODE SUITE", SIAM J. SCI.
+           COMPUTE., Vol. 18, No. 1, pp. 1-22, January 1997.
+    .. [3] E. Hairer, G. Wanner, "Solving Ordinary Differential Equations I:
+           Nonstiff Problems", Sec. III.2.
+    .. [4] A. Curtis, M. J. D. Powell, and J. Reid, "On the estimation of
+           sparse Jacobian matrices", Journal of the Institute of Mathematics
+           and its Applications, 13, pp. 117-120, 1974.
+    """
+
+    def __init__(self, fun, t0, y0, t_bound, max_step=np.inf,
+                 rtol=1e-3, atol=1e-6, jac=None, jac_sparsity=None,
+                 vectorized=False, first_step=None, **extraneous):
+        warn_extraneous(extraneous)
+        super().__init__(fun, t0, y0, t_bound, vectorized,
+                         support_complex=True)
+        self.max_step = validate_max_step(max_step)
+        self.rtol, self.atol = validate_tol(rtol, atol, self.n)
+        f = self.fun(self.t, self.y)
+        if first_step is None:
+            self.h_abs = select_initial_step(self.fun, self.t, self.y,
+                                             t_bound, max_step, f,
+                                             self.direction, 1,
+                                             self.rtol, self.atol)
+        else:
+            self.h_abs = validate_first_step(first_step, t0, t_bound)
+        self.h_abs_old = None
+        self.error_norm_old = None
+
+        self.newton_tol = max(10 * EPS / rtol, min(0.03, rtol ** 0.5))
+
+        self.jac_factor = None
+        self.jac, self.J = self._validate_jac(jac, jac_sparsity)
+        if issparse(self.J):
+            def lu(A):
+                self.nlu += 1
+                return splu(A)
+
+            def solve_lu(LU, b):
+                return LU.solve(b)
+
+            I = eye(self.n, format='csc', dtype=self.y.dtype)
+        else:
+            def lu(A):
+                self.nlu += 1
+                return lu_factor(A, overwrite_a=True)
+
+            def solve_lu(LU, b):
+                return lu_solve(LU, b, overwrite_b=True)
+
+            I = np.identity(self.n, dtype=self.y.dtype)
+
+        self.lu = lu
+        self.solve_lu = solve_lu
+        self.I = I
+
+        kappa = np.array([0, -0.1850, -1/9, -0.0823, -0.0415, 0])
+        self.gamma = np.hstack((0, np.cumsum(1 / np.arange(1, MAX_ORDER + 1))))
+        self.alpha = (1 - kappa) * self.gamma
+        self.error_const = kappa * self.gamma + 1 / np.arange(1, MAX_ORDER + 2)
+
+        D = np.empty((MAX_ORDER + 3, self.n), dtype=self.y.dtype)
+        D[0] = self.y
+        D[1] = f * self.h_abs * self.direction
+        self.D = D
+
+        self.order = 1
+        self.n_equal_steps = 0
+        self.LU = None
+
+    def _validate_jac(self, jac, sparsity):
+        t0 = self.t
+        y0 = self.y
+
+        if jac is None:
+            if sparsity is not None:
+                if issparse(sparsity):
+                    sparsity = csc_matrix(sparsity)
+                groups = group_columns(sparsity)
+                sparsity = (sparsity, groups)
+
+            def jac_wrapped(t, y):
+                self.njev += 1
+                f = self.fun_single(t, y)
+                J, self.jac_factor = num_jac(self.fun_vectorized, t, y, f,
+                                             self.atol, self.jac_factor,
+                                             sparsity)
+                return J
+            J = jac_wrapped(t0, y0)
+        elif callable(jac):
+            J = jac(t0, y0)
+            self.njev += 1
+            if issparse(J):
+                J = csc_matrix(J, dtype=y0.dtype)
+
+                def jac_wrapped(t, y):
+                    self.njev += 1
+                    return csc_matrix(jac(t, y), dtype=y0.dtype)
+            else:
+                J = np.asarray(J, dtype=y0.dtype)
+
+                def jac_wrapped(t, y):
+                    self.njev += 1
+                    return np.asarray(jac(t, y), dtype=y0.dtype)
+
+            if J.shape != (self.n, self.n):
+                raise ValueError(f"`jac` is expected to have shape {(self.n, self.n)},"
+                                 f" but actually has {J.shape}.")
+        else:
+            if issparse(jac):
+                J = csc_matrix(jac, dtype=y0.dtype)
+            else:
+                J = np.asarray(jac, dtype=y0.dtype)
+
+            if J.shape != (self.n, self.n):
+                raise ValueError(f"`jac` is expected to have shape {(self.n, self.n)},"
+                                 f" but actually has {J.shape}.")
+            jac_wrapped = None
+
+        return jac_wrapped, J
+
+    def _step_impl(self):
+        t = self.t
+        D = self.D
+
+        max_step = self.max_step
+        min_step = 10 * np.abs(np.nextafter(t, self.direction * np.inf) - t)
+        if self.h_abs > max_step:
+            h_abs = max_step
+            change_D(D, self.order, max_step / self.h_abs)
+            self.n_equal_steps = 0
+        elif self.h_abs < min_step:
+            h_abs = min_step
+            change_D(D, self.order, min_step / self.h_abs)
+            self.n_equal_steps = 0
+        else:
+            h_abs = self.h_abs
+
+        atol = self.atol
+        rtol = self.rtol
+        order = self.order
+
+        alpha = self.alpha
+        gamma = self.gamma
+        error_const = self.error_const
+
+        J = self.J
+        LU = self.LU
+        current_jac = self.jac is None
+
+        step_accepted = False
+        while not step_accepted:
+            if h_abs < min_step:
+                return False, self.TOO_SMALL_STEP
+
+            h = h_abs * self.direction
+            t_new = t + h
+
+            if self.direction * (t_new - self.t_bound) > 0:
+                t_new = self.t_bound
+                change_D(D, order, np.abs(t_new - t) / h_abs)
+                self.n_equal_steps = 0
+                LU = None
+
+            h = t_new - t
+            h_abs = np.abs(h)
+
+            y_predict = np.sum(D[:order + 1], axis=0)
+
+            scale = atol + rtol * np.abs(y_predict)
+            psi = np.dot(D[1: order + 1].T, gamma[1: order + 1]) / alpha[order]
+
+            converged = False
+            c = h / alpha[order]
+            while not converged:
+                if LU is None:
+                    LU = self.lu(self.I - c * J)
+
+                converged, n_iter, y_new, d = solve_bdf_system(
+                    self.fun, t_new, y_predict, c, psi, LU, self.solve_lu,
+                    scale, self.newton_tol)
+
+                if not converged:
+                    if current_jac:
+                        break
+                    J = self.jac(t_new, y_predict)
+                    LU = None
+                    current_jac = True
+
+            if not converged:
+                factor = 0.5
+                h_abs *= factor
+                change_D(D, order, factor)
+                self.n_equal_steps = 0
+                LU = None
+                continue
+
+            safety = 0.9 * (2 * NEWTON_MAXITER + 1) / (2 * NEWTON_MAXITER
+                                                       + n_iter)
+
+            scale = atol + rtol * np.abs(y_new)
+            error = error_const[order] * d
+            error_norm = norm(error / scale)
+
+            if error_norm > 1:
+                factor = max(MIN_FACTOR,
+                             safety * error_norm ** (-1 / (order + 1)))
+                h_abs *= factor
+                change_D(D, order, factor)
+                self.n_equal_steps = 0
+                # As we didn't have problems with convergence, we don't
+                # reset LU here.
+            else:
+                step_accepted = True
+
+        self.n_equal_steps += 1
+
+        self.t = t_new
+        self.y = y_new
+
+        self.h_abs = h_abs
+        self.J = J
+        self.LU = LU
+
+        # Update differences. The principal relation here is
+        # D^{j + 1} y_n = D^{j} y_n - D^{j} y_{n - 1}. Keep in mind that D
+        # contained difference for previous interpolating polynomial and
+        # d = D^{k + 1} y_n. Thus this elegant code follows.
+        D[order + 2] = d - D[order + 1]
+        D[order + 1] = d
+        for i in reversed(range(order + 1)):
+            D[i] += D[i + 1]
+
+        if self.n_equal_steps < order + 1:
+            return True, None
+
+        if order > 1:
+            error_m = error_const[order - 1] * D[order]
+            error_m_norm = norm(error_m / scale)
+        else:
+            error_m_norm = np.inf
+
+        if order < MAX_ORDER:
+            error_p = error_const[order + 1] * D[order + 2]
+            error_p_norm = norm(error_p / scale)
+        else:
+            error_p_norm = np.inf
+
+        error_norms = np.array([error_m_norm, error_norm, error_p_norm])
+        with np.errstate(divide='ignore'):
+            factors = error_norms ** (-1 / np.arange(order, order + 3))
+
+        delta_order = np.argmax(factors) - 1
+        order += delta_order
+        self.order = order
+
+        factor = min(MAX_FACTOR, safety * np.max(factors))
+        self.h_abs *= factor
+        change_D(D, order, factor)
+        self.n_equal_steps = 0
+        self.LU = None
+
+        return True, None
+
+    def _dense_output_impl(self):
+        return BdfDenseOutput(self.t_old, self.t, self.h_abs * self.direction,
+                              self.order, self.D[:self.order + 1].copy())
+
+
+class BdfDenseOutput(DenseOutput):
+    def __init__(self, t_old, t, h, order, D):
+        super().__init__(t_old, t)
+        self.order = order
+        self.t_shift = self.t - h * np.arange(self.order)
+        self.denom = h * (1 + np.arange(self.order))
+        self.D = D
+
+    def _call_impl(self, t):
+        if t.ndim == 0:
+            x = (t - self.t_shift) / self.denom
+            p = np.cumprod(x)
+        else:
+            x = (t - self.t_shift[:, None]) / self.denom[:, None]
+            p = np.cumprod(x, axis=0)
+
+        y = np.dot(self.D[1:].T, p)
+        if y.ndim == 1:
+            y += self.D[0]
+        else:
+            y += self.D[0, :, None]
+
+        return y