| --- |
| language: rna |
| license: cc0-1.0 |
| tags: |
| - Biology |
| - ncRNA |
| size_categories: |
| - 10M<n<100M |
| task_categories: |
| - text-generation |
| - fill-mask |
| task_ids: |
| - language-modeling |
| - masked-language-modeling |
| pretty_name: RNAcentral |
| --- |
| |
| # RNAcentral Release 27 |
| This is an official HuggingFace version of the RNAcentral Release 27 available at https://rnacentral.org/ |
|
|
| Included in this dataset are: |
| - Unique ncRNA sequences for 46,210,324 sequences from our member databases. |
|
|
| # Using the data |
| All RNAcentral data is provided with a CC-0 license, so you are free to do as you with with it. |
|
|
| If you do make use of our data, please consider citing our paper: https://doi.org/10.1093/nar/gkaf1329 |
|
|
| ## Detailed database versions |
| As part of our releases, we import updates from our expert member databases. Here is the detailed breakdown of |
| database versions for all those that have been updated this time around. |
|
|
| # New databases |
| JaponicusDB date imported 2026-06-23 |
|
|
| CIRCpedia v3 |
|
|
| circAtlas 3.0 |
|
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| Sci-ModoM (via MODOMICS) v4.0.2 |
|
|
| mirtronDB 2.0 |
|
|
|
|
| # Database updates |
| These databases were updated in this release to the version stated below: |
|
|
| ENA 2025-03-06 -> 2026-05-15 |
|
|
| Ensembl 113 -> 115 |
|
|
| Ensembl Fungi 60 -> 62 |
|
|
| Ensembl Metazoa 60 -> 62 |
|
|
| Ensembl Plants 60 -> 62 |
|
|
| Ensembl Protists 60 -> 62 |
|
|
| Ensembl/GENCODE human 47/mouse M34 -> human 49/mouse M38 |
|
|
| Expression Atlas 2025-04-01 -> 2026-06-23 |
|
|
| FlyBase FB2025_01 -> FB2026_01 |
|
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| GeneCards 5.23 -> 5.26 |
|
|
| HGNC 2025-03-06 -> 2026-04-28 |
|
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| IntAct 2024-11-05 -> 2026-04-13 |
|
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| MalaCards 5.23 -> 5.26 |
|
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| PDBe 2024-11-05 -> 2026-04-29 |
|
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| PomBase 2024-11-05 -> 2026-04-28 |
|
|
| QuickGo 2024-11-05 -> 2026-04-13 |
|
|
| RefSeq 2025-03-06 -> 2026-03-25 (v235) |
|
|
| SGD 2025-03-06 -> 2026-03-26 |
|
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| WormBase 2025-03-06 -> 2026-05-15 |
|
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| ZFIN 2024-11-05 -> 2026-03-27 |
|
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| TAIR 10 -> 12 |
|
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| gtRNAdb 21 -> 22 |
|
|
| RGD March 2018 -> 2026-04-28 |
|
|
| SILVA 138.1 -> 138.2 |
|
|
| MGNIFY 2025-03-06 -> 2026-04-13 |
|
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| MODOMICS 2024 -> 2025 |
|
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| EVLNCRNAS 2.0 -> 3.0 |
|
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| REDIportal 2.0 -> 3.0 |
|
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|
|
