PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8hca_H_L | 8hca | sars-cov-2 omicron ba.1 spike trimer (6p) in complex with 3 yb13-292 fabs (1 rbd up) | yes | viral protein/immune system | 2022-11-01 | 2023-01-25 | electron microscopy | 4.35 | N.A. | N.A. | 36828833 | 10.1038/s41467-023-36761-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | H | L | EVQLVESGGGLVKPGGSLRLSCAASGFSFITYNMNWVRQAPGKGLEWVSSISSNILSSTSYIYYADSVKGRFTISRDDAANSLFLQMNSLRVEDTAQYYCARTRSRSVRNCTSATCPVDAFDLWGQGTMVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIVLTQSPLSLPVTPGEPASISCRSSQSLLRSNGYNYLDWYLQKPGQSPHLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVESGGGLVKPGGSLRLSCAASGFSFITYNMNWVRQAPGKGLEWVSSISSNILSSTSYIYYADSVKGRFTISRDDAANSLFLQMNSLRVEDTAQYYCARTRSRSVRNCTSATCPVDAFDLWGQGTMVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVLTQSPLSLPVTPGEPASISCRSSQSLLRSNGYNYLDWYLQKPGQSPHLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 24.138266 | 23.315315 | 238 | 219 | 232 | 219 | 232 | 219 | 100 | heavy chain of yb13-292 fab | light chain of yb13-292 fab | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 48 | 22 | 0.88 | HL | train |
8hcb_F_G | 8hcb | sars-cov-2 omicron ba.1 spike trimer (6p) in complex with 3 yb13-292 fabs (2 rbd up) | yes | viral protein/immune system | 2022-11-01 | 2023-01-25 | electron microscopy | 4.18 | N.A. | N.A. | 36828833 | 10.1038/s41467-023-36761-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | F | G | EVQLVESGGGLVKPGGSLRLSCAASGFSFITYNMNWVRQAPGKGLEWVSSISSNILSSTSYIYYADSVKGRFTISRDDAANSLFLQMNSLRVEDTAQYYCARTRSRSVRNCTSATCPVDAFDLWGQGTMVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIVLTQSPLSLPVTPGEPASISCRSSQSLLRSNGYNYLDWYLQKPGQSPHLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVESGGGLVKPGGSLRLSCAASGFSFITYNMNWVRQAPGKGLEWVSSISSNILSSTSYIYYADSVKGRFTISRDDAANSLFLQMNSLRVEDTAQYYCARTRSRSVRNCTSATCPVDAFDLWGQGTMVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVLTQSPLSLPVTPGEPASISCRSSQSLLRSNGYNYLDWYLQKPGQSPHLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.664972 | 22.507587 | 238 | 219 | 232 | 219 | 232 | 219 | 110 | heavy chain of yb13-292 fab | light chain of yb13-292 fab | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 48 | 22 | 0.88 | HL | train |
8hcb_D_E | 8hcb | sars-cov-2 omicron ba.1 spike trimer (6p) in complex with 3 yb13-292 fabs (2 rbd up) | yes | viral protein/immune system | 2022-11-01 | 2023-01-25 | electron microscopy | 4.18 | N.A. | N.A. | 36828833 | 10.1038/s41467-023-36761-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | D | E | EVQLVESGGGLVKPGGSLRLSCAASGFSFITYNMNWVRQAPGKGLEWVSSISSNILSSTSYIYYADSVKGRFTISRDDAANSLFLQMNSLRVEDTAQYYCARTRSRSVRNCTSATCPVDAFDLWGQGTMVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIVLTQSPLSLPVTPGEPASISCRSSQSLLRSNGYNYLDWYLQKPGQSPHLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVESGGGLVKPGGSLRLSCAASGFSFITYNMNWVRQAPGKGLEWVSSISSNILSSTSYIYYADSVKGRFTISRDDAANSLFLQMNSLRVEDTAQYYCARTRSRSVRNCTSATCPVDAFDLWGQGTMVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVLTQSPLSLPVTPGEPASISCRSSQSLLRSNGYNYLDWYLQKPGQSPHLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 24.007318 | 23.169748 | 238 | 219 | 232 | 219 | 232 | 219 | 101 | heavy chain of yb13-292 fab | light chain of yb13-292 fab | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 46 | 21 | 0.88 | HL | train |
8hcb_H_L | 8hcb | sars-cov-2 omicron ba.1 spike trimer (6p) in complex with 3 yb13-292 fabs (2 rbd up) | yes | viral protein/immune system | 2022-11-01 | 2023-01-25 | electron microscopy | 4.18 | N.A. | N.A. | 36828833 | 10.1038/s41467-023-36761-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | H | L | EVQLVESGGGLVKPGGSLRLSCAASGFSFITYNMNWVRQAPGKGLEWVSSISSNILSSTSYIYYADSVKGRFTISRDDAANSLFLQMNSLRVEDTAQYYCARTRSRSVRNCTSATCPVDAFDLWGQGTMVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIVLTQSPLSLPVTPGEPASISCRSSQSLLRSNGYNYLDWYLQKPGQSPHLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVESGGGLVKPGGSLRLSCAASGFSFITYNMNWVRQAPGKGLEWVSSISSNILSSTSYIYYADSVKGRFTISRDDAANSLFLQMNSLRVEDTAQYYCARTRSRSVRNCTSATCPVDAFDLWGQGTMVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVLTQSPLSLPVTPGEPASISCRSSQSLLRSNGYNYLDWYLQKPGQSPHLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 24.017847 | 23.233068 | 238 | 219 | 232 | 219 | 232 | 219 | 104 | heavy chain of yb13-292 fab | light chain of yb13-292 fab | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 49 | 22 | 0.88 | HL | train |
8ezk_H | 8ezk | pfs25 in complex with transmission-reducing antibody as01-04 | no | immune system | 2022-11-01 | 2023-08-16 | x-ray diffraction | 2.3 | 0.26 | 0.229 | 37542029 | 10.1038/s41541-023-00712-z | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | TGQVQLQESGPGLVKPSETLSLTCTVSGFSISSSYYWDWIRQPPGKGLEWIGNIHHTGATYYNPSLKSRVTISIDTANNQFSLRLRSVTAADAAVYYCARGGMGTTKRGWFDPWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSQSVLTQPPSASGTPGQRVTISCSGSSSNIRVNYVYWYQQIPGTAPKLLIYRNDQRPSGVPDRFSASKSGTSASLAISGLRSQDEADYYCAAWDDSLTGPVFGGGTKLTVLGTKHHHHHH | N.A. | GQVQLQESGPGLVKPSETLSLTCTVSGFSISSSYYWDWIRQPPGKGLEWIGNIHHTGATYYNPSLKSRVTISIDTANNQFSLRLRSVTAADAAVYYCARGGMGTTKRGWFDPWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSQSVLTQPPSASGTPGQRVTISCSGSSSNIRVNYVYWYQQIPGTAPKLLIYRNDQRPSGVPDRFSASKSGTSASLAISGLRSQDEADYYCAAWDDSLTGPVFGGGTKLTVLGTK | N.A. | 17.522923 | 0 | 263 | 0 | 236 | 0 | 256 | 0 | 0 | transmission-reducing antibody as01-4, single-chain fv | N.A. | homo sapiens | N.A. | A | protein | 25 kda ookinete surface antigen | plasmodium falciparum (isolate nf54) | 53 | 24 | 0.86 | H_only | train |
8ezk_I | 8ezk | pfs25 in complex with transmission-reducing antibody as01-04 | no | immune system | 2022-11-01 | 2023-08-16 | x-ray diffraction | 2.3 | 0.26 | 0.229 | 37542029 | 10.1038/s41541-023-00712-z | 0 | auth_asym_id | scFv | N.A. | N.A. | I | N.A. | TGQVQLQESGPGLVKPSETLSLTCTVSGFSISSSYYWDWIRQPPGKGLEWIGNIHHTGATYYNPSLKSRVTISIDTANNQFSLRLRSVTAADAAVYYCARGGMGTTKRGWFDPWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSQSVLTQPPSASGTPGQRVTISCSGSSSNIRVNYVYWYQQIPGTAPKLLIYRNDQRPSGVPDRFSASKSGTSASLAISGLRSQDEADYYCAAWDDSLTGPVFGGGTKLTVLGTKHHHHHH | N.A. | TGQVQLQESGPGLVKPSETLSLTCTVSGFSISSSYYWDWIRQPPGKGLEWIGNIHHTGATYYNPSLKSRVTISIDTANNQFSLRLRSVTAADAAVYYCARGGMGTTKRGWFDPWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSQSVLTQPPSASGTPGQRVTISCSGSSSNIRVNYVYWYQQIPGTAPKLLIYRNDQRPSGVPDRFSASKSGTSASLAISGLRSQDEADYYCAAWDDSLTGPVFGGGTKLTVLGT | N.A. | 17.497646 | 0 | 263 | 0 | 237 | 0 | 256 | 0 | 0 | transmission-reducing antibody as01-4, single-chain fv | N.A. | homo sapiens | N.A. | B | protein | 25 kda ookinete surface antigen | plasmodium falciparum (isolate nf54) | 57 | 25 | 0.83 | H_only | train |
8ezl_H | 8ezl | pfs25 in complex with transmission-reducing antibody as01-50 | no | immune system | 2022-11-01 | 2023-08-16 | x-ray diffraction | 2.3 | 0.255 | 0.215 | 37542029 | 10.1038/s41541-023-00712-z | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | TGQITLKESGPTLVKPTQTLTLTCTFSGSSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKRRLTITKDTSKNQVVLTMTNMDPVDTATYYCVHRGSAPYYYDSSGYYSTFYYFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSQPVLTQPPSASASLGASLSLTCTLSSGYNNYKVDWYQQRPGKGPRFVMRVGTGGIVGSKGDGIPDRFSVLGSGLNRNLTIKNIQEDDESDYHCGADHGSGSNLDYVVFGGGTKLTVLGTKHHHHHH | N.A. | QITLKESGPTLVKPTQTLTLTCTFSGSSLSTSGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKRRLTITKDTSKNQVVLTMTNMDPVDTATYYCVHRGSAPYYYDSSGYYSTFYYFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSQPVLTQPPSASASLGASLSLTCTLSSGYNNYKVDWYQQRPGKGPRFVMRVGTGGIVGSKGDGIPDRFSVLGSGLNRNLTIKNIQEDDESDYHCGADHGSGSNLDYVVFGGGTKLTVLG | N.A. | 17.95048 | 0 | 280 | 0 | 254 | 0 | 270 | 0 | 0 | transmission-reducing antibody as01-50, single chain fv | N.A. | plasmodium falciparum nf54 | N.A. | A | protein | 25 kda ookinete surface antigen | plasmodium falciparum nf54 | 48 | 26 | 0.96 | H_only | train |
8ezm_H | 8ezm | pfs25 in complex with transmission-reducing antibody as01-63 | no | immune system | 2022-11-01 | 2023-08-16 | x-ray diffraction | 2.1 | 0.237 | 0.204 | 37542029 | 10.1038/s41541-023-00712-z | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | TGQVQLVESGGGVVQPGRSLRLSCAASGFSFGSHDMSWVRQAPGKGLDWVAVIWYDGSKKYYADSVKGRFTISRDSSKKTLYLQMNTLRAEDTAVYYCARAAYDSRSLDYWGHGTLVTISSGGGGSGGGGSGGGGSGGGGSQPVLTQPPSASASLGASLSLTCTLSSAYSNYSVDWYQQRPGKGPRFVMRVGTGGIVRSKGDGIPDRFSVLASGLNRYLTIQNIQEEDESDYHCGADHGSGSNFLYVFGTGTKVTVLGTKHHHHHH | N.A. | QVQLVESGGGVVQPGRSLRLSCAASGFSFGSHDMSWVRQAPGKGLDWVAVIWYDGSKKYYADSVKGRFTISRDSSKKTLYLQMNTLRAEDTAVYYCARAAYDSRSLDYWGHGTLVTISSGGGGSGGGGSGGGGSGGGGSQPVLTQPPSASASLGASLSLTCTLSSAYSNYSVDWYQQRPGKGPRFVMRVGTGGIVRSKGDGIPDRFSVLASGLNRYLTIQNIQEEDESDYHCGADHGSGSNFLYVFGTGTKVTVLG | N.A. | 17.617962 | 0 | 266 | 0 | 236 | 0 | 256 | 0 | 0 | transmission-reducing antibody as01-63, single-chain fv | N.A. | homo sapiens | N.A. | A | protein | 25 kda ookinete surface antigen | plasmodium falciparum | 47 | 21 | 0.81 | H_only | train |
8hcq_E | 8hcq | cryo-em structure of endothelin1-bound etar-gq complex | no | membrane protein | 2022-11-02 | 2023-03-22 | electron microscopy | 3.01 | N.A. | N.A. | 36882417 | 10.1038/s41467-023-36998-9 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.573404 | 0 | 285 | 0 | 232 | 0 | 247 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(q) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 28;24 | 19;9 | 0.95;0.9 | H_only | train |
8f0g_X_Y | 8f0g | structure of sars-cov-2 omicron ba.1 spike in complex with antibody fab 1c3 | no | viral protein/immune system | 2022-11-02 | 2023-05-03 | electron microscopy | 3.35 | N.A. | N.A. | 37083327 | 10.1016/j.celrep.2023.112421 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | X | Y | QVQLLESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQPPGKGLEWVSGSSWNSGSVVYADSVKGRFTISRDSAKNSLHLQMNSLRVEDTALYYCAKAVDPTRGSYSPDYGFDIWGQGTMVTVSS | DAIRMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPNLLIYAASSLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGGGTKVEIK | QLLESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQPPGKGLEWVSGSSWNSGSVVYADSVKGRFTISRDSAKNSLHLQMNSLRVEDTALYYCAKAVDPTRGSYSPDYGFDIWGQG | AIRMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPNLLIYAASSLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGGGTKVEI | 13.931146 | 12.802257 | 126 | 108 | 114 | 98 | 117 | 106 | 48 | antibody 1c3 fab heavy chain | antibody 1c3 fab light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 39 | 21 | 0.84 | HL | train |
8f0h_B_D | 8f0h | structure of sars-cov-2 spike with antibody fabs 2a10 and 1h2 (local refinement of the rbd and fabs 1h2 and 2a10) | no | viral protein/immune system | 2022-11-02 | 2023-05-03 | electron microscopy | 3.18 | N.A. | N.A. | 37083327 | 10.1016/j.celrep.2023.112421 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV3 | B | D | QVQLQQSGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMRSLRAEDTALYYCAKDSGRKLLWGREDYYMGVWGKGTTVTV | SYELTQPPSVSVAPGKTARITCGGSNIGSKSVHWYQQKPGQAPVLVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGG | VQLQQSGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMRSLRAEDTALYYCAKDSGRKLLWGREDYYMGVWGKGTTVTV | YELTQPPSVSVAPGKTARITCGGSNIGSKSVHWYQQKPGQAPVLVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVVFGG | 14.171416 | 13.231979 | 124 | 101 | 123 | 100 | 123 | 100 | 45 | antibody fab 1h2 heavy chain | antibody fab 1h2 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 64 | 16 | 0.47 | HL | train |
8f0h_H_L | 8f0h | structure of sars-cov-2 spike with antibody fabs 2a10 and 1h2 (local refinement of the rbd and fabs 1h2 and 2a10) | no | viral protein/immune system | 2022-11-02 | 2023-05-03 | electron microscopy | 3.18 | N.A. | N.A. | 37083327 | 10.1016/j.celrep.2023.112421 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | QVQLVESGGGLIQPGGSLRLSCAASEFIVSSNYMSWVRQAPGKGLEWVSLLYSGGTTYYADSVKGRFTISRDNSKNTLFLQMNSLRAEDTAMYYCARDRGPWLHDYWGQGTLVTV | DIVMTQSPSSLSASVGDRVTITCQASQDINKYCNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTINSLQPEDIATYYCQQYDNLPPTFGGGTKVEIKRT | VQLVESGGGLIQPGGSLRLSCAASEFIVSSNYMSWVRQAPGKGLEWVSLLYSGGTTYYADSVKGRFTISRDNSKNTLFLQMNSLRAEDTAMYYCARDRGPWLHDYWGQGTLVTV | DIVMTQSPSSLSASVGDRVTITCQASQDINKYCNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTINSLQPEDIATYYCQQYDNLPPTFGGGTKV | 13.097622 | 12.829779 | 115 | 109 | 114 | 104 | 114 | 104 | 34 | antibody fab 2a10 heavy chain | antibody fab 2a10 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 56 | 21 | 0.75 | HL | train |
8f0l_H_L | 8f0l | crystal structure of the human t cell receptor cd3(epsilon) n-terminal peptide complexed with adi-26906 fab | no | immune system | 2022-11-03 | 2023-03-29 | x-ray diffraction | 1.81 | 0.195 | 0.166 | 36991534 | 10.1080/19420862.2023.2189974 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV4 | H | L | QVQLVQSGAEVKKPGASVKVSCKASGFNIKDYYMHWVRQAPGQRLEWMGWIDLENANTIYDAKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARDAYGRYFYDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIVMTQSPDSLAVSLGERATINCKSSQSLLNARTGKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCKQSYSRRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGFNIKDYYMHWVRQAPGQRLEWMGWIDLENANTIYDAKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARDAYGRYFYDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVMTQSPDSLAVSLGERATINCKSSQSLLNARTGKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCKQSYSRRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.496664 | 23.427399 | 223 | 219 | 211 | 216 | 218 | 216 | 92 | adi-26906 fab heavy chain | adi-26906 fab light chain | homo sapiens | homo sapiens | P | peptide | t-cell surface glycoprotein cd3 epsilon chain | homo sapiens | 20 | 13 | 0.93 | HL | train |
8f0l_A_B | 8f0l | crystal structure of the human t cell receptor cd3(epsilon) n-terminal peptide complexed with adi-26906 fab | no | immune system | 2022-11-03 | 2023-03-29 | x-ray diffraction | 1.81 | 0.195 | 0.166 | 36991534 | 10.1080/19420862.2023.2189974 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV4 | A | B | QVQLVQSGAEVKKPGASVKVSCKASGFNIKDYYMHWVRQAPGQRLEWMGWIDLENANTIYDAKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARDAYGRYFYDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIVMTQSPDSLAVSLGERATINCKSSQSLLNARTGKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCKQSYSRRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGFNIKDYYMHWVRQAPGQRLEWMGWIDLENANTIYDAKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCARDAYGRYFYDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVMTQSPDSLAVSLGERATINCKSSQSLLNARTGKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCKQSYSRRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.615894 | 23.522985 | 223 | 219 | 211 | 218 | 218 | 218 | 93 | adi-26906 fab heavy chain | adi-26906 fab light chain | homo sapiens | homo sapiens | Q | peptide | t-cell surface glycoprotein cd3 epsilon chain | homo sapiens | 18 | 12 | 1 | HL | train |
8f0j_N | 8f0j | calcitonin receptor in complex with gs and pramlintide analogue peptide san45 | yes | signaling protein/immune system | 2022-11-03 | 2023-08-02 | electron microscopy | 2 | N.A. | N.A. | 37537379 | 10.1038/s41589-023-01393-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.76546 | 0 | 138 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 43;30 | 13;11 | 0.62;0.73 | H_only | train |
8f0i_C_D | 8f0i | crystal structure of sars-cov-2 receptor binding domain in complex with human antibody cova309-22 | no | viral protein/immune system | 2022-11-03 | 2023-09-13 | x-ray diffraction | 3.7 | 0.275 | 0.226 | 37841584 | 10.1016/j.isci.2023.108009 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | C | D | EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKHYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDEGTMTTYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKHYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDEGTMTTYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.485325 | 23.074863 | 223 | 216 | 223 | 212 | 223 | 212 | 100 | cova309-22 heavy chain | cova309-22 light chain | homo sapiens | homo sapiens | A;B | protein;protein | spike protein s1;spike protein s1 | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 60;38 | 21;6 | 0.78;0.32 | HL | train |
8f0i_E_F | 8f0i | crystal structure of sars-cov-2 receptor binding domain in complex with human antibody cova309-22 | no | viral protein/immune system | 2022-11-03 | 2023-09-13 | x-ray diffraction | 3.7 | 0.275 | 0.226 | 37841584 | 10.1016/j.isci.2023.108009 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | E | F | EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKHYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDEGTMTTYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKHYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDEGTMTTYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.434685 | 23.006092 | 223 | 216 | 223 | 212 | 223 | 212 | 103 | cova309-22 heavy chain | cova309-22 light chain | homo sapiens | homo sapiens | B | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 60 | 21 | 0.78 | HL | train |
8f0i_H_I | 8f0i | crystal structure of sars-cov-2 receptor binding domain in complex with human antibody cova309-22 | no | viral protein/immune system | 2022-11-03 | 2023-09-13 | x-ray diffraction | 3.7 | 0.275 | 0.226 | 37841584 | 10.1016/j.isci.2023.108009 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | I | EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKHYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDEGTMTTYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVIWYDGSNKHYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDEGTMTTYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.651314 | 23.120165 | 223 | 216 | 223 | 212 | 223 | 212 | 100 | cova309-22 heavy chain | cova309-22 light chain | homo sapiens | homo sapiens | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 58 | 21 | 0.78 | HL | train |
8hdp_N | 8hdp | structure of a2br bound to endogenous agonists adenosine | no | membrane protein | 2022-11-05 | 2023-01-18 | electron microscopy | 3.2 | N.A. | N.A. | 36575181 | 10.1038/s41421-022-00503-1 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.759757 | 0 | 128 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | camelus bactrianus | N.A. | A;B | protein;protein | chimeric minigs;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 47;32 | 12;11 | 0.55;0.69 | H_only | train |
8f2a_N | 8f2a | human amylin3 receptor in complex with gs and pramlintide analogue peptide san385 (cluster 5 conformation) | yes | signaling protein/immune system | 2022-11-07 | 2023-08-02 | electron microscopy | 2.2 | N.A. | N.A. | 37537379 | 10.1038/s41589-023-01393-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.771005 | 0 | 138 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 47;29 | 15;11 | 0.62;0.79 | H_only | train |
8f2b_N | 8f2b | amylin 3 receptor in complex with gs and pramlintide analogue peptide san45 | yes | signaling protein/immune system | 2022-11-07 | 2023-08-02 | electron microscopy | 2 | N.A. | N.A. | 37537379 | 10.1038/s41589-023-01393-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.771981 | 0 | 138 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 46;30 | 15;11 | 0.65;0.73 | H_only | train |
8heb_E_D | 8heb | sars-cov-2 spike trimer in complex with rmab 9h1 fab in the class 1 conformation | yes | viral protein/immune system | 2022-11-08 | 2023-04-26 | electron microscopy | 3.53 | N.A. | N.A. | 37062240 | 10.1016/j.bbrc.2023.04.002 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | E | D | QSVEESGGRLVTPGTPLTLTCTVSGFSLSRYAMSWVRQAPGKGLEWIGIIVDSGHTAYASWAKGRFTISRTSTTVDLKMTSLTTEDTATYFCARETGGGAFYVFEFWGPGTVVTVSS | QVLTQTPSSVSAAVGGTVTINCQASEDIYDNLVWYQQKPGQPPKLLIYDASTLAFGVSSRFRGSGSGTHFTLTMRDVQCDDAATYYCQGEFSCSSGDCTAFGGGTEVVVK | QSVEESGGRLVTPGTPLTLTCTVSGFSLSRYAMSWVRQAPGKGLEWIGIIVDSGHTAYASWAKGRFTISRTSTTVDLKMTSLTTEDTATYFCARETGGGAFYVFEFWGPGTVVTVSS | QVLTQTPSSVSAAVGGTVTINCQASEDIYDNLVWYQQKPGQPPKLLIYDASTLAFGVSSRFRGSGSGTHFTLTMRDVQCDDAATYYCQGEFSCSSGDCTAFGGGTEVVVK | 13.742399 | 13.616976 | 117 | 110 | 117 | 110 | 117 | 110 | 39 | rabbit antibody 9h1 heavy chain | rabbit antibody 9h1 light chain | oryctolagus cuniculus | oryctolagus cuniculus | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 38 | 17 | 0.85 | HL | train |
8heb_G_F | 8heb | sars-cov-2 spike trimer in complex with rmab 9h1 fab in the class 1 conformation | yes | viral protein/immune system | 2022-11-08 | 2023-04-26 | electron microscopy | 3.53 | N.A. | N.A. | 37062240 | 10.1016/j.bbrc.2023.04.002 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | G | F | QSVEESGGRLVTPGTPLTLTCTVSGFSLSRYAMSWVRQAPGKGLEWIGIIVDSGHTAYASWAKGRFTISRTSTTVDLKMTSLTTEDTATYFCARETGGGAFYVFEFWGPGTVVTVSS | QVLTQTPSSVSAAVGGTVTINCQASEDIYDNLVWYQQKPGQPPKLLIYDASTLAFGVSSRFRGSGSGTHFTLTMRDVQCDDAATYYCQGEFSCSSGDCTAFGGGTEVVVK | QSVEESGGRLVTPGTPLTLTCTVSGFSLSRYAMSWVRQAPGKGLEWIGIIVDSGHTAYASWAKGRFTISRTSTTVDLKMTSLTTEDTATYFCARETGGGAFYVFEFWGPGTVVTVSS | QVLTQTPSSVSAAVGGTVTINCQASEDIYDNLVWYQQKPGQPPKLLIYDASTLAFGVSSRFRGSGSGTHFTLTMRDVQCDDAATYYCQGEFSCSSGDCTAFGGGTEVVVK | 13.749091 | 13.627391 | 117 | 110 | 117 | 110 | 117 | 110 | 40 | rabbit antibody 9h1 heavy chain | rabbit antibody 9h1 light chain | oryctolagus cuniculus | oryctolagus cuniculus | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 38 | 17 | 0.89 | HL | train |
8heb_I_H | 8heb | sars-cov-2 spike trimer in complex with rmab 9h1 fab in the class 1 conformation | yes | viral protein/immune system | 2022-11-08 | 2023-04-26 | electron microscopy | 3.53 | N.A. | N.A. | 37062240 | 10.1016/j.bbrc.2023.04.002 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | I | H | QSVEESGGRLVTPGTPLTLTCTVSGFSLSRYAMSWVRQAPGKGLEWIGIIVDSGHTAYASWAKGRFTISRTSTTVDLKMTSLTTEDTATYFCARETGGGAFYVFEFWGPGTVVTVSS | QVLTQTPSSVSAAVGGTVTINCQASEDIYDNLVWYQQKPGQPPKLLIYDASTLAFGVSSRFRGSGSGTHFTLTMRDVQCDDAATYYCQGEFSCSSGDCTAFGGGTEVVVK | QSVEESGGRLVTPGTPLTLTCTVSGFSLSRYAMSWVRQAPGKGLEWIGIIVDSGHTAYASWAKGRFTISRTSTTVDLKMTSLTTEDTATYFCARETGGGAFYVFEFWGPGTVVTVSS | QVLTQTPSSVSAAVGGTVTINCQASEDIYDNLVWYQQKPGQPPKLLIYDASTLAFGVSSRFRGSGSGTHFTLTMRDVQCDDAATYYCQGEFSCSSGDCTAFGGGTEVVVK | 13.739951 | 13.641869 | 117 | 110 | 117 | 110 | 117 | 110 | 38 | rabbit antibody 9h1 heavy chain | rabbit antibody 9h1 light chain | oryctolagus cuniculus | oryctolagus cuniculus | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 38 | 17 | 0.85 | HL | train |
8hed_G_F | 8hed | local refinement of the sars-cov-2 spike trimer in complex with rmab 9h1 fab | no | viral protein/immune system | 2022-11-08 | 2023-04-26 | electron microscopy | 3.59 | N.A. | N.A. | 37062240 | 10.1016/j.bbrc.2023.04.002 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | G | F | QSVEESGGRLVTPGTPLTLTCTVSGFSLSRYAMSWVRQAPGKGLEWIGIIVDSGHTAYASWAKGRFTISRTSTTVDLKMTSLTTEDTATYFCARETGGGAFYVFEFWGPGTVVTVSS | QVLTQTPSSVSAAVGGTVTINCQASEDIYDNLVWYQQKPGQPPKLLIYDASTLAFGVSSRFRGSGSGTHFTLTMRDVQCDDAATYYCQGEFSCSSGDCTAFGGGTEVVVK | QSVEESGGRLVTPGTPLTLTCTVSGFSLSRYAMSWVRQAPGKGLEWIGIIVDSGHTAYASWAKGRFTISRTSTTVDLKMTSLTTEDTATYFCARETGGGAFYVFEFWGPGTVVTVSS | QVLTQTPSSVSAAVGGTVTINCQASEDIYDNLVWYQQKPGQPPKLLIYDASTLAFGVSSRFRGSGSGTHFTLTMRDVQCDDAATYYCQGEFSCSSGDCTAFGGGTEVVVK | 13.73675 | 13.672808 | 117 | 110 | 117 | 110 | 117 | 110 | 37 | rabbit antibody 9h1 heavy chain | rabbit antibody 9h1 light chain | oryctolagus cuniculus | oryctolagus cuniculus | B | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 37 | 17 | 0.85 | HL | train |
8bjz_A_B | 8bjz | crystal structure of antibody fab with sialac-amidine-lys | no | immune system | 2022-11-08 | 2023-09-27 | x-ray diffraction | 1.89 | 0.223 | 0.186 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | A | B | TGVHSQVQLKQSGPGLVAPSQSLSITCTVSGFSLTSFGVHWVRQPPGKGLEWLGVIWAVGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQIDDTAMYYCATYGNYGGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | TGVHSDIQMTQSPKSMSMSVGERVTLSCKASENVHTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTISSVQAEDLADYHCGQTYTYPFTFGSGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLKQSGPGLVAPSQSLSITCTVSGFSLTSFGVHWVRQPPGKGLEWLGVIWAVGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQIDDTAMYYCATYGNYGGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIQMTQSPKSMSMSVGERVTLSCKASENVHTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTISSVQAEDLADYHCGQTYTYPFTFGSGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.94575 | 23.297232 | 227 | 219 | 215 | 211 | 220 | 211 | 90 | bar-1 fab heavy chain | bar-1 fab light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8bjz_H_L | 8bjz | crystal structure of antibody fab with sialac-amidine-lys | no | immune system | 2022-11-08 | 2023-09-27 | x-ray diffraction | 1.89 | 0.223 | 0.186 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | L | TGVHSQVQLKQSGPGLVAPSQSLSITCTVSGFSLTSFGVHWVRQPPGKGLEWLGVIWAVGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQIDDTAMYYCATYGNYGGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | TGVHSDIQMTQSPKSMSMSVGERVTLSCKASENVHTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTISSVQAEDLADYHCGQTYTYPFTFGSGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLKQSGPGLVAPSQSLSITCTVSGFSLTSFGVHWVRQPPGKGLEWLGVIWAVGSTNYNSALMSRLSISKDNSKSQVFLKMNSLQIDDTAMYYCATYGNYGGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPKSMSMSVGERVTLSCKASENVHTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTISSVQAEDLADYHCGQTYTYPFTFGSGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.994507 | 23.225769 | 227 | 219 | 218 | 213 | 218 | 213 | 104 | bar-1 fab heavy chain | bar-1 fab light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8hes_H_L | 8hes | crystal structure of sars-cov-2 rbd and niv-10 complex | no | viral protein/immune system | 2022-11-08 | 2023-11-08 | x-ray diffraction | 2.2 | 0.241 | 0.196 | 37452031 | 10.1038/s41467-023-39890-8 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFTFYSYWMTWVRQAPGKGLEWVANIKHDESESHYVDSVRGRFTISRDNAKNSVYLQMKGLRAEDTAVYYCARDGGYNILTAYYHAPSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSSLEVLFQGPLGHHHHHH | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNFVSWYRQYPGKAPQLMIYDVSRRPSGDSDRFSGSKSGNTASLTISGLQAEDEAEYHCSSYTGRSPYVVFGGGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCAASGFTFYSYWMTWVRQAPGKGLEWVANIKHDESESHYVDSVRGRFTISRDNAKNSVYLQMKGLRAEDTAVYYCARDGGYNILTAYYHAPSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | ALTQPASVSGSPGQSITISCTGTSSDVGGYNFVSWYRQYPGKAPQLMIYDVSRRPSGDSDRFSGSKSGNTASLTISGLQAEDEAEYHCSSYTGRSPYVVFGGGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 24.342476 | 20.806973 | 249 | 217 | 217 | 212 | 225 | 212 | 100 | niv-10 fab h-chain | niv-10 fab l-chain | homo sapiens | homo sapiens | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 51 | 21 | 0.84 | HL | train |
8bk2_H_L | 8bk2 | x-ray structure of meningococcal factor h binding protein variant 2 in complex with a specific and bactericidal human monoclonal antibody 1b1 | no | protein binding | 2022-11-08 | 2023-11-22 | x-ray diffraction | 2.41 | 0.27 | 0.204 | 39114449 | 10.1096/fba.2023-00077 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | QPAMAEVQLVESGGNLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARVAAGLKDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | EIVLTQSPGTLSLSPGERATLSCRASQSISSSYLAWYQQKPGQAPRLLIFGASSRATGIPDRFSGSGSGTGFTLTISRLEPEDFAVYYCQHYDSSLPMTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | AEVQLVESGGNLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARVAAGLKDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | EIVLTQSPGTLSLSPGERATLSCRASQSISSSYLAWYQQKPGQAPRLLIFGASSRATGIPDRFSGSGSGTGFTLTISRLEPEDFAVYYCQHYDSSLPMTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.020317 | 22.734938 | 226 | 216 | 216 | 214 | 218 | 214 | 98 | fab heavy chain | fab light chains | homo sapiens | homo sapiens | A;B | protein;protein | factor h-binding protein;factor h-binding protein | neisseria meningitidis serogroup b;neisseria meningitidis serogroup b | 40;16 | 19;5 | 0.79;0.62 | HL | train |
8bk2_D_E | 8bk2 | x-ray structure of meningococcal factor h binding protein variant 2 in complex with a specific and bactericidal human monoclonal antibody 1b1 | no | protein binding | 2022-11-08 | 2023-11-22 | x-ray diffraction | 2.41 | 0.27 | 0.204 | 39114449 | 10.1096/fba.2023-00077 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | D | E | QPAMAEVQLVESGGNLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARVAAGLKDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | EIVLTQSPGTLSLSPGERATLSCRASQSISSSYLAWYQQKPGQAPRLLIFGASSRATGIPDRFSGSGSGTGFTLTISRLEPEDFAVYYCQHYDSSLPMTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGNLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARVAAGLKDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | EIVLTQSPGTLSLSPGERATLSCRASQSISSSYLAWYQQKPGQAPRLLIFGASSRATGIPDRFSGSGSGTGFTLTISRLEPEDFAVYYCQHYDSSLPMTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.294123 | 23.194471 | 226 | 216 | 213 | 214 | 218 | 214 | 96 | fab heavy chain | fab light chains | homo sapiens | homo sapiens | B | protein | factor h-binding protein | neisseria meningitidis serogroup b | 39 | 20 | 0.83 | HL | train |
8bk2_F_G | 8bk2 | x-ray structure of meningococcal factor h binding protein variant 2 in complex with a specific and bactericidal human monoclonal antibody 1b1 | no | protein binding | 2022-11-08 | 2023-11-22 | x-ray diffraction | 2.41 | 0.27 | 0.204 | 39114449 | 10.1096/fba.2023-00077 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | F | G | QPAMAEVQLVESGGNLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARVAAGLKDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | EIVLTQSPGTLSLSPGERATLSCRASQSISSSYLAWYQQKPGQAPRLLIFGASSRATGIPDRFSGSGSGTGFTLTISRLEPEDFAVYYCQHYDSSLPMTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGNLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARVAAGLKDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | EIVLTQSPGTLSLSPGERATLSCRASQSISSSYLAWYQQKPGQAPRLLIFGASSRATGIPDRFSGSGSGTGFTLTISRLEPEDFAVYYCQHYDSSLPMTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.991383 | 22.332396 | 226 | 216 | 210 | 206 | 216 | 213 | 85 | fab heavy chain | fab light chains | homo sapiens | homo sapiens | C | protein | factor h-binding protein | neisseria meningitidis serogroup b | 40 | 20 | 0.8 | HL | train |
8f2j_A_B | 8f2j | crystal structure of antibody wrair-2134 in complex with sars-cov-2 receptor binding domain | no | viral protein/immune system | 2022-11-08 | 2023-12-13 | x-ray diffraction | 3.16 | 0.245 | 0.209 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | A | B | EVQLVESGGGVVQPGRSLRLSCAASGFIFSSYGMYWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLSSSSGWDDYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTSYVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGVVQPGRSLRLSCAASGFIFSSYGMYWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLSSSSGWDDYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | YELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTSYVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 23.88832 | 22.84975 | 233 | 214 | 229 | 211 | 229 | 211 | 98 | wrair-2134 fab heavy chain | wrair-2134 fab light chain | homo sapiens | homo sapiens | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 42 | 17 | 0.81 | HL | train |
8f2j_H_L | 8f2j | crystal structure of antibody wrair-2134 in complex with sars-cov-2 receptor binding domain | no | viral protein/immune system | 2022-11-08 | 2023-12-13 | x-ray diffraction | 3.16 | 0.245 | 0.209 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | H | L | EVQLVESGGGVVQPGRSLRLSCAASGFIFSSYGMYWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLSSSSGWDDYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTSYVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGVVQPGRSLRLSCAASGFIFSSYGMYWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLSSSSGWDDYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | YELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTSYVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 23.851654 | 22.947279 | 233 | 214 | 231 | 211 | 231 | 211 | 99 | wrair-2134 fab heavy chain | wrair-2134 fab light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 52 | 19 | 0.76 | HL | train |
8f2j_D_F | 8f2j | crystal structure of antibody wrair-2134 in complex with sars-cov-2 receptor binding domain | no | viral protein/immune system | 2022-11-08 | 2023-12-13 | x-ray diffraction | 3.16 | 0.245 | 0.209 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | D | F | EVQLVESGGGVVQPGRSLRLSCAASGFIFSSYGMYWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLSSSSGWDDYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTSYVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGVVQPGRSLRLSCAASGFIFSSYGMYWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLSSSSGWDDYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | YELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTSYVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 24.562279 | 21.153824 | 233 | 214 | 231 | 211 | 231 | 211 | 97 | wrair-2134 fab heavy chain | wrair-2134 fab light chain | homo sapiens | homo sapiens | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 40 | 18 | 0.86 | HL | train |
8f2j_I_J | 8f2j | crystal structure of antibody wrair-2134 in complex with sars-cov-2 receptor binding domain | no | viral protein/immune system | 2022-11-08 | 2023-12-13 | x-ray diffraction | 3.16 | 0.245 | 0.209 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | I | J | EVQLVESGGGVVQPGRSLRLSCAASGFIFSSYGMYWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLSSSSGWDDYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTSYVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGVVQPGRSLRLSCAASGFIFSSYGMYWVRQAPGKGLEWVAVIWYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLSSSSGWDDYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | SYELTQPPSVSVSPGQTASITCSGDKLGDKYACWYQQKPGQSPVLVIYQDSKRPSGIPERFSGSNSGNTATLTISGTQAMDEADYYCQAWDSSTSYVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 25.3182 | 21.392353 | 233 | 214 | 230 | 212 | 230 | 212 | 101 | wrair-2134 fab heavy chain | wrair-2134 fab light chain | homo sapiens | homo sapiens | K | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 39 | 18 | 0.86 | HL | train |
8f2t_A_B | 8f2t | antibody fab directed against sars-cov-2 spike protein receptor binding domain (rbd) | no | immune system | 2022-11-08 | 2023-12-13 | x-ray diffraction | 2.12 | 0.257 | 0.203 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | QVQLVESGGGLVKPGGSLRLSCAASGFTVGSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGSSGAWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPASC | EIVMTQSPSSLSASVGDSVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGGGSGTDFTLTITSLQPEDIATYYCQQYDNFPPTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSADSTYSLSSTLTLSAADYAAHAVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLVKPGGSLRLSCAASGFTVGSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGSSGAWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPA | EIVMTQSPSSLSASVGDSVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGGGSGTDFTLTITSLQPEDIATYYCQQYDNFPPTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSADSTYSLSSTLTLSAADYAAHAVYACEVTHQGLSSPVTKSFNR | 20.418312 | 23.308565 | 221 | 214 | 219 | 211 | 219 | 211 | 95 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8f2v_B_A | 8f2v | antibody fab directed against sars-cov-2 spike protein receptor binding domain (rbd) | no | immune system | 2022-11-08 | 2023-12-13 | x-ray diffraction | 3.5 | 0.289 | 0.246 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV3 | B | A | EVQLVQSGAEVKKPGSSVRVSCKVSGYTFTGYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCATVRVGASDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLIISRVEAGDEADYYCQVWDSSSVHYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVQSGAEVKKPGSSVRVSCKVSGYTFTGYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCATVRVGASDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | YVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLIISRVEAGDEADYYCQVWDSSSVHYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 23.401054 | 23.401033 | 223 | 214 | 222 | 210 | 222 | 210 | 96 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8f2v_D_C | 8f2v | antibody fab directed against sars-cov-2 spike protein receptor binding domain (rbd) | no | immune system | 2022-11-08 | 2023-12-13 | x-ray diffraction | 3.5 | 0.289 | 0.246 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV3 | D | C | EVQLVQSGAEVKKPGSSVRVSCKVSGYTFTGYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCATVRVGASDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLIISRVEAGDEADYYCQVWDSSSVHYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVQSGAEVKKPGSSVRVSCKVSGYTFTGYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCATVRVGASDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | YVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLIISRVEAGDEADYYCQVWDSSSVHYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 23.40712 | 23.404917 | 223 | 214 | 222 | 210 | 222 | 210 | 94 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8f2v_F_E | 8f2v | antibody fab directed against sars-cov-2 spike protein receptor binding domain (rbd) | no | immune system | 2022-11-08 | 2023-12-13 | x-ray diffraction | 3.5 | 0.289 | 0.246 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV3 | F | E | EVQLVQSGAEVKKPGSSVRVSCKVSGYTFTGYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCATVRVGASDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLIISRVEAGDEADYYCQVWDSSSVHYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVQSGAEVKKPGSSVRVSCKVSGYTFTGYYMHWVRQAPGQGLEWMGIINPSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCATVRVGASDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | YVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLIISRVEAGDEADYYCQVWDSSSVHYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 23.000963 | 22.002361 | 223 | 214 | 222 | 210 | 222 | 210 | 90 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8f38_E_H | 8f38 | cryo-em structure of x6 cobra (h1n1) hemagglutinin bound to cr6261 fab | no | viral protein/immune system | 2022-11-09 | 2023-12-13 | electron microscopy | 2.64 | N.A. | N.A. | 38810648 | 10.1016/j.str.2024.05.001 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | E | H | EVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTV | VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL | 13.766235 | 13.72699 | 232 | 221 | 118 | 109 | 118 | 109 | 44 | cr6261 fab heavy chain | cr6261 fab light chain | homo sapiens | homo sapiens | A | protein | hemagglutinin | synthetic construct | 36 | 11 | 0.85 | HL | train |
8f38_D_G | 8f38 | cryo-em structure of x6 cobra (h1n1) hemagglutinin bound to cr6261 fab | no | viral protein/immune system | 2022-11-09 | 2023-12-13 | electron microscopy | 2.64 | N.A. | N.A. | 38810648 | 10.1016/j.str.2024.05.001 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | D | G | EVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTV | VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL | 13.767855 | 13.726975 | 232 | 221 | 118 | 109 | 118 | 109 | 45 | cr6261 fab heavy chain | cr6261 fab light chain | homo sapiens | homo sapiens | B | protein | hemagglutinin | synthetic construct | 37 | 11 | 0.79 | HL | train |
8f38_F_I | 8f38 | cryo-em structure of x6 cobra (h1n1) hemagglutinin bound to cr6261 fab | no | viral protein/immune system | 2022-11-09 | 2023-12-13 | electron microscopy | 2.64 | N.A. | N.A. | 38810648 | 10.1016/j.str.2024.05.001 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | F | I | EVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTV | VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL | 13.765296 | 13.726943 | 232 | 221 | 118 | 109 | 118 | 109 | 44 | cr6261 fab heavy chain | cr6261 fab light chain | homo sapiens | homo sapiens | C | protein | hemagglutinin | synthetic construct | 37 | 11 | 0.79 | HL | train |
8blq_A_B | 8blq | cryo-em structure of the codv-il13-refab triple complex | no | immune system | 2022-11-10 | 2023-06-07 | electron microscopy | 3.97 | N.A. | N.A. | 37248285 | 10.1038/s41598-023-35678-4 | 0 | auth_asym_id | VH+:VL+ | IGHV1 | IGKV7 | A | B | VQLQQSGPELVKPGASVKISCKASGYSFTSYWIHWIKQRPGQGLEWIGMIDPSDGETRLNQRFQGRATLTVDESTSTAYMQLRSPTSEDSAVYYCTRLKEYGNYDSFYFDVWGAGTLVTVSSGEVQLKESGPGLVAPGGSLSITCTVSGFSLTDSSINWVRQPPGKGLEWLGMIWGDGRIDYADALKSRLSISKDSSKSQVFLEMTSLRTDDTATYYCARDGYFPYAMDFWGQGTSVTVSSGGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG... | DIVLTQSPASLAVSLGQRATISCRASESVDSYGQSYMHWYQQKAGQPPKLLIYLASNLESGVPARFSGSGSRTDFTLTIDPVQAEDAATYYCQQNAEDSRTFGGGTKLEIKGGGGGGGDIQMTQSPASLSVSVGDTITLTCHASQNIDVWLSWFQQKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQAHSYPFTFGGGTKLEIKGGGGGRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVT... | VQLQQSGPELVKPGASVKISCKASGYSFTSYWIHWIKQRPGQGLEWIGMIDPSDGETRLNQRFQGRATLTVDESTSTAYMQLRSPTSEDSAVYYCTRLKEYGNYDSFYFDVWGAGTLVTVSSGEVQLKESGPGLVAPGGSLSITCTVSGFSLTDSSINWVRQPPGKGLEWLGMIWGDGRIDYADALKSRLSISKDSSKSQVFLEMTSLRTDDTATYYCARDGYFPYAMDFWGQGTSVTVSSGGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG... | DIVLTQSPASLAVSLGQRATISCRASESVDSYGQSYMHWYQQKAGQPPKLLIYLASNLESGVPARFSGSGSRTDFTLTIDPVQAEDAATYYCQQNAEDSRTFGGGTKLEIKGGGGGGGDIQMTQSPASLSVSVGDTITLTCHASQNIDVWLSWFQQKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQAHSYPFTFGGGTKLEIKGGGGGRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVT... | 27.17222 | 32.684822 | 343 | 334 | 343 | 334 | 343 | 334 | 155 | codv-fab, heavy chain | codv-fab, light chain | homo sapiens | homo sapiens | D | protein | interleukin-13, human | homo sapiens | 44 | 8 | 0.42 | HL | train |
8blq_E_C | 8blq | cryo-em structure of the codv-il13-refab triple complex | no | immune system | 2022-11-10 | 2023-06-07 | electron microscopy | 3.97 | N.A. | N.A. | 37248285 | 10.1038/s41598-023-35678-4 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV3 | E | C | VQLVQSGAEVKKPGASVKVSCKASGYTFTNYGLSWVRQAPGQGLEWMGWISANNGDTNYGQEFQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDSSSSWARWFFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | YVLTQPPSVSVAPGKTARITCGGNIIGSKLVHWYQQKPGQAPVLVIYDDGDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDTGSDPVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | VQLVQSGAEVKKPGASVKVSCKASGYTFTNYGLSWVRQAPGQGLEWMGWISANNGDTNYGQEFQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDSSSSWARWFFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | YVLTQPPSVSVAPGKTARITCGGNIIGSKLVHWYQQKPGQAPVLVIYDDGDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDTGSDPVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 22.78627 | 23.584818 | 222 | 212 | 222 | 212 | 222 | 212 | 88 | refab, heavy chain | refab, light chain | homo sapiens | homo sapiens | D | protein | interleukin-13, human | homo sapiens | 31 | 13 | 0.76 | HL | train |
8f4p_D | 8f4p | sars-cov-2 spike protein trimer (down conformation) bound with a nanobody | no | viral protein/immune system | 2022-11-11 | 2023-11-15 | electron microscopy | 3.7 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGGTFSSIGMGWFRQAPGKEREFVAAISWDGGATAYADSVKGRFTISADNSKNTAYLQMNSLKPEDTAVYYCAKEDVGKPFDWGQGTLVTVSSG | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGGTFSSIGMGWFRQAPGKEREFVAAISWDGGATAYADSVKGRFTISADNSKNTAYLQMNSLKPEDTAVYYCAKEDVGKPFDWGQGTLVTVSSG | N.A. | 13.748194 | 0 | 118 | 0 | 118 | 0 | 118 | 0 | 0 | anti-s1 nanobody | N.A. | lama glama | N.A. | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 34;29 | 8;10 | 0.4;0.71 | H_only | train |
8f5n_H_L | 8f5n | identification of an immunodominant region on a group a streptococcus t-antigen reveals temperature-dependent motion in pili | yes | structural protein | 2022-11-14 | 2023-03-08 | x-ray diffraction | 1.9 | 0.244 | 0.202 | 36809931 | 10.1080/21505594.2023.2180228 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | EVQLQQSGAELVKPGASVKLSCKASGYTFTSFYMYWVKQRPGQGLEWIGGINPSNGGANFNEKFKNKATLTVDKSSSTAYMQLSSLTSEDSAVYYCTRGFYYGHWYFDVWGAGTTVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | GADIVMTQSTSSLSASLGDRVTISCRASQDISNSLNWYQQKPDGTVKLLIHYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQVNTLPLTFGAGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNRGEC | EVQLQQSGAELVKPGASVKLSCKASGYTFTSFYMYWVKQRPGQGLEWIGGINPSNGGANFNEKFKNKATLTVDKSSSTAYMQLSSLTSEDSAVYYCTRGFYYGHWYFDVWGAGTTVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | GADIVMTQSTSSLSASLGDRVTISCRASQDISNSLNWYQQKPDGTVKLLIHYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQVNTLPLTFGAGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNR | 21.91581 | 23.119041 | 221 | 216 | 208 | 212 | 220 | 213 | 87 | mouse-human fab heavy chain | mouse-human fab light chain | homo sapiens | homo sapiens | A | protein | t18.1 major pilin backbone protein t-antigen | streptococcus pyogenes | 43 | 18 | 0.9 | HL | train |
8f5i_X_Y | 8f5i | sars-cov-2 s2 helix epitope scaffold bound by antibody dh1057.1 | no | immune system | 2022-11-14 | 2023-10-11 | x-ray diffraction | 1.9 | 0.244 | 0.211 | 38036525 | 10.1038/s41467-023-43638-9 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | X | Y | EVQLVESGTEVKKPGASVKVSCKTSGYIFTNYYIHWVRQAPGQGLEWMGIFNPNGGGTSYAQKFQGRITLTGNTSANTGYMVLRSLTSEDTAVYYCARDPRTSGDNDGFDMWGQGTKVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | VLTQSPATLSLSPGERATLSCRASQSLSSYNYLAWYQQKPGQAPRLLIYAASKRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYFCQQRSNRPPAWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGTEVKKPGASVKVSCKTSGYIFTNYYIHWVRQAPGQGLEWMGIFNPNGGGTSYAQKFQGRITLTGNTSANTGYMVLRSLTSEDTAVYYCARDPRTSGDNDGFDMWGQGTKVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | VLTQSPATLSLSPGERATLSCRASQSLSSYNYLAWYQQKPGQAPRLLIYAASKRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYFCQQRSNRPPAWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.323101 | 23.223228 | 227 | 216 | 219 | 215 | 222 | 215 | 90 | dh1057.1 hc | dh1057.1 lc | homo sapiens | homo sapiens | A | protein | specialized acyl carrier protein | rhodopseudomonas palustris | 43 | 22 | 0.92 | HL | train |
8f5i_H_L | 8f5i | sars-cov-2 s2 helix epitope scaffold bound by antibody dh1057.1 | no | immune system | 2022-11-14 | 2023-10-11 | x-ray diffraction | 1.9 | 0.244 | 0.211 | 38036525 | 10.1038/s41467-023-43638-9 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | EVQLVESGTEVKKPGASVKVSCKTSGYIFTNYYIHWVRQAPGQGLEWMGIFNPNGGGTSYAQKFQGRITLTGNTSANTGYMVLRSLTSEDTAVYYCARDPRTSGDNDGFDMWGQGTKVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | VLTQSPATLSLSPGERATLSCRASQSLSSYNYLAWYQQKPGQAPRLLIYAASKRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYFCQQRSNRPPAWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGTEVKKPGASVKVSCKTSGYIFTNYYIHWVRQAPGQGLEWMGIFNPNGGGTSYAQKFQGRITLTGNTSANTGYMVLRSLTSEDTAVYYCARDPRTSGDNDGFDMWGQGTKVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | VLTQSPATLSLSPGERATLSCRASQSLSSYNYLAWYQQKPGQAPRLLIYAASKRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYFCQQRSNRPPAWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.35169 | 23.027094 | 227 | 216 | 219 | 215 | 222 | 215 | 98 | dh1057.1 hc | dh1057.1 lc | homo sapiens | homo sapiens | B | protein | specialized acyl carrier protein | rhodopseudomonas palustris | 34 | 21 | 0.91 | HL | train |
8f60_A_B | 8f60 | anti-btla monoclonal antibody r23c8 in complex with btla | yes | immune system | 2022-11-15 | 2023-05-24 | x-ray diffraction | 1.64 | 0.205 | 0.181 | 37279757 | 10.1016/j.str.2023.05.011 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | QSVEESGGRLVTPGTPLTLTCTASGFDISKYNIQWVRQSPGKGLEYIGFINYGGSAYYASRAKGRFTISKTSTTVDLKIASPTTGDTATYFCARGLSNSDLWGPGTLVTVSLGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSSQPVTCNVAHPATNTKVDKTVAPSTCSHHHHHHHH | AIDMTQTPSSVSEPVGGTVTIKCQASQSISSWLSWYQQKPGQPPKLLIYRASTLASGIPSRFKGSGSGTEYTLTISDLECADAATYYCQCTYGGVVGSTSDDNPFGGGTEVVVKGDPVAPTVLIFPPAADQVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTQYNSHKEYTCKVTQGTTSVVQSFNRGDC | SVEESGGRLVTPGTPLTLTCTASGFDISKYNIQWVRQSPGKGLEYIGFINYGGSAYYASRAKGRFTISKTSTTVDLKIASPTTGDTATYFCARGLSNSDLWGPGTLVTVSLGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSSQPVTCNVAHPATNTKVDKTVAPS | IDMTQTPSSVSEPVGGTVTIKCQASQSISSWLSWYQQKPGQPPKLLIYRASTLASGIPSRFKGSGSGTEYTLTISDLECADAATYYCQCTYGGVVGSTSDDNPFGGGTEVVVKGDPVAPTVLIFPPAADQVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTQYNSHKEYTCKVTQGTTSVVQSFNRGDC | 20.668842 | 23.224607 | 221 | 218 | 208 | 217 | 209 | 217 | 97 | r23c8 fab heavy chain | r23c8 fab light chain | oryctolagus cuniculus | oryctolagus cuniculus | C | protein | b- and t-lymphocyte attenuator | homo sapiens | 52 | 18 | 0.62 | HL | train |
8hgl_H_L | 8hgl | sars-cov-2 spike in complex with neutralizing antibody niv-11 | yes | viral protein/immune system | 2022-11-15 | 2023-10-25 | electron microscopy | 2.9 | N.A. | N.A. | 37452031 | 10.1038/s41467-023-39890-8 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | QLVQSGPEVKKPGTSVKVSCKASGFTFYYSAVQWVRQARGQRLEWLGWMAVGSGKANYAQKFQERLTLTRDMSTSTAYMELSSLRSEDTAVYYCAAPNCTGGSCYDGFNLWGQGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPGTLSLSPGDRAILSCRASQTVNSNYLAWYQQKPGQAPRLLIYGTSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWLFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVQSGPEVKKPGTSVKVSCKASGFTFYYSAVQWVRQARGQRLEWLGWMAVGSGKANYAQKFQERLTLTRDMSTSTAYMELSSLRSEDTAVYYCAAPNCTGGSCYDGFNLWGQGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPGTLSLSPGDRAILSCRASQTVNSNYLAWYQQKPGQAPRLLIYGTSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWLFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.225271 | 23.487816 | 223 | 215 | 223 | 215 | 223 | 215 | 95 | niv-11 fab heavy chain | niv-11 fab light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 41 | 19 | 0.86 | HL | train |
8hgl_C_D | 8hgl | sars-cov-2 spike in complex with neutralizing antibody niv-11 | yes | viral protein/immune system | 2022-11-15 | 2023-10-25 | electron microscopy | 2.9 | N.A. | N.A. | 37452031 | 10.1038/s41467-023-39890-8 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | C | D | QLVQSGPEVKKPGTSVKVSCKASGFTFYYSAVQWVRQARGQRLEWLGWMAVGSGKANYAQKFQERLTLTRDMSTSTAYMELSSLRSEDTAVYYCAAPNCTGGSCYDGFNLWGQGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPGTLSLSPGDRAILSCRASQTVNSNYLAWYQQKPGQAPRLLIYGTSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWLFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVQSGPEVKKPGTSVKVSCKASGFTFYYSAVQWVRQARGQRLEWLGWMAVGSGKANYAQKFQERLTLTRDMSTSTAYMELSSLRSEDTAVYYCAAPNCTGGSCYDGFNLWGQGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPGTLSLSPGDRAILSCRASQTVNSNYLAWYQQKPGQAPRLLIYGTSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWLFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.233236 | 23.481918 | 223 | 215 | 223 | 215 | 223 | 215 | 96 | niv-11 fab heavy chain | niv-11 fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 42 | 19 | 0.86 | HL | train |
8hgl_F_G | 8hgl | sars-cov-2 spike in complex with neutralizing antibody niv-11 | yes | viral protein/immune system | 2022-11-15 | 2023-10-25 | electron microscopy | 2.9 | N.A. | N.A. | 37452031 | 10.1038/s41467-023-39890-8 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | F | G | QLVQSGPEVKKPGTSVKVSCKASGFTFYYSAVQWVRQARGQRLEWLGWMAVGSGKANYAQKFQERLTLTRDMSTSTAYMELSSLRSEDTAVYYCAAPNCTGGSCYDGFNLWGQGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPGTLSLSPGDRAILSCRASQTVNSNYLAWYQQKPGQAPRLLIYGTSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWLFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVQSGPEVKKPGTSVKVSCKASGFTFYYSAVQWVRQARGQRLEWLGWMAVGSGKANYAQKFQERLTLTRDMSTSTAYMELSSLRSEDTAVYYCAAPNCTGGSCYDGFNLWGQGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPGTLSLSPGDRAILSCRASQTVNSNYLAWYQQKPGQAPRLLIYGTSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWLFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.230183 | 23.48503 | 223 | 215 | 223 | 215 | 223 | 215 | 97 | niv-11 fab heavy chain | niv-11 fab light chain | homo sapiens | homo sapiens | E | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 42 | 19 | 0.86 | HL | train |
8hgm_C_D | 8hgm | structure of sars-cov-2 spike rbd in complex with neutralizing antibody niv-11 | yes | viral protein/immune system | 2022-11-15 | 2023-10-25 | electron microscopy | 3.4 | N.A. | N.A. | 37452031 | 10.1038/s41467-023-39890-8 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | C | D | QLVQSGPEVKKPGTSVKVSCKASGFTFYYSAVQWVRQARGQRLEWLGWMAVGSGKANYAQKFQERLTLTRDMSTSTAYMELSSLRSEDTAVYYCAAPNCTGGSCYDGFNLWGQGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPGTLSLSPGDRAILSCRASQTVNSNYLAWYQQKPGQAPRLLIYGTSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWLFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVQSGPEVKKPGTSVKVSCKASGFTFYYSAVQWVRQARGQRLEWLGWMAVGSGKANYAQKFQERLTLTRDMSTSTAYMELSSLRSEDTAVYYCAAPNCTGGSCYDGFNLWGQGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPGTLSLSPGDRAILSCRASQTVNSNYLAWYQQKPGQAPRLLIYGTSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWLFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.283545 | 23.542416 | 223 | 215 | 223 | 215 | 223 | 215 | 97 | niv-11 fab heavy chain | niv-11 fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 40 | 19 | 0.86 | HL | train |
8f6f_D_C | 8f6f | cryo-em structure of a zinc-loaded d51a mutant of the yiip-fab complex | yes | transport protein | 2022-11-16 | 2023-02-08 | electron microscopy | 3.6 | N.A. | N.A. | 37906094 | 10.7554/eLife.87167 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | D | C | EISEVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG | 21.949537 | 22.290138 | 238 | 216 | 202 | 192 | 227 | 202 | 98 | fab2r heavy chain | fab2r light chain | homo sapiens | homo sapiens | A | protein | cadmium and zinc efflux pump fief | shewanella oneidensis | 45 | 22 | 0.92 | HL | train |
8f6f_F_E | 8f6f | cryo-em structure of a zinc-loaded d51a mutant of the yiip-fab complex | yes | transport protein | 2022-11-16 | 2023-02-08 | electron microscopy | 3.6 | N.A. | N.A. | 37906094 | 10.7554/eLife.87167 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | F | E | EISEVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG | 21.968199 | 22.284836 | 238 | 216 | 202 | 192 | 227 | 202 | 100 | fab2r heavy chain | fab2r light chain | homo sapiens | homo sapiens | B | protein | cadmium and zinc efflux pump fief | shewanella oneidensis | 47 | 22 | 0.92 | HL | train |
8f6i_D_C | 8f6i | cryo-em structure of a zinc-loaded symmetrical d70a mutant of the yiip-fab complex | yes | transport protein | 2022-11-16 | 2023-02-08 | electron microscopy | 4.03 | N.A. | N.A. | 37906094 | 10.7554/eLife.87167 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | D | C | EISEVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG | 22.239592 | 22.433626 | 238 | 216 | 208 | 192 | 226 | 202 | 98 | fab2r heavy chain | fab2r light chain | homo sapiens | homo sapiens | A | protein | cadmium and zinc efflux pump fief | shewanella oneidensis mr-1 | 43 | 22 | 0.96 | HL | train |
8f6i_F_E | 8f6i | cryo-em structure of a zinc-loaded symmetrical d70a mutant of the yiip-fab complex | yes | transport protein | 2022-11-16 | 2023-02-08 | electron microscopy | 4.03 | N.A. | N.A. | 37906094 | 10.7554/eLife.87167 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | F | E | EISEVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG | 22.250023 | 22.421093 | 238 | 216 | 209 | 192 | 227 | 202 | 103 | fab2r heavy chain | fab2r light chain | homo sapiens | homo sapiens | B | protein | cadmium and zinc efflux pump fief | shewanella oneidensis mr-1 | 50 | 25 | 0.89 | HL | train |
8f6j_D_C | 8f6j | cryo-em structure of a zinc-loaded d287a mutant of the yiip-fab complex | yes | transport protein | 2022-11-16 | 2023-02-08 | electron microscopy | 3.7 | N.A. | N.A. | 37906094 | 10.7554/eLife.87167 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | D | C | EISEVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG | 22.21554 | 22.34096 | 238 | 216 | 209 | 192 | 227 | 202 | 106 | fab2r heavy chain | fab2r light chain | homo sapiens | homo sapiens | A | protein | cadmium and zinc efflux pump fief | shewanella oneidensis | 48 | 24 | 0.92 | HL | train |
8f6j_F_E | 8f6j | cryo-em structure of a zinc-loaded d287a mutant of the yiip-fab complex | yes | transport protein | 2022-11-16 | 2023-02-08 | electron microscopy | 3.7 | N.A. | N.A. | 37906094 | 10.7554/eLife.87167 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | F | E | EISEVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSYSGLSPRRHWSYGAMDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQIWSWPLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG | 22.209929 | 22.388811 | 238 | 216 | 209 | 192 | 227 | 202 | 108 | fab2r heavy chain | fab2r light chain | homo sapiens | homo sapiens | B | protein | cadmium and zinc efflux pump fief | shewanella oneidensis | 48 | 24 | 0.92 | HL | train |
8f6l_A_B | 8f6l | anti-btla monoclonal antibody h25f7 in complex with btla | no | immune system | 2022-11-16 | 2023-05-24 | x-ray diffraction | 1.85 | 0.24 | 0.198 | 37279757 | 10.1016/j.str.2023.05.011 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV4 | A | B | QVQLVQSGAEVKKPGASVKVSCKASGFSLWTYAMNWVRQAPGQGLEWMGIISDDGTTYYATWAKGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDAGAGGVQDYLTLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDGSHHHHHHHH | DIVMTQSPDSLAVSLGERATINCQASRNIYNFLAWYQQKPGQPPKLLIYSASTLASGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQGSSNSNIDNPFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGFSLWTYAMNWVRQAPGQGLEWMGIISDDGTTYYATWAKGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDAGAGGVQDYLTLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIVMTQSPDSLAVSLGERATINCQASRNIYNFLAWYQQKPGQPPKLLIYSASTLASGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQGSSNSNIDNPFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.5546 | 23.067205 | 235 | 217 | 216 | 217 | 222 | 217 | 99 | h25f7 fab heavy chain | h25f7 fab light chain | homo sapiens | homo sapiens | C | protein | b- and t-lymphocyte attenuator | homo sapiens | 42 | 22 | 0.92 | HL | train |
8f6o_A_B | 8f6o | anti-btla monoclonal antibody h22b3 in complex with btla | no | immune system | 2022-11-16 | 2023-05-24 | x-ray diffraction | 2.31 | 0.266 | 0.215 | 37279757 | 10.1016/j.str.2023.05.011 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | A | B | QVQLVQSGAEVKKPGASVKVSCKASGFSLSSYGVSWVRQAPGQGLEWMGAISYDGITYYASWAKSRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARGDYYDDYVYVYALDIWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGHHHHHH | EIVLTQSPGTLSLSPGERATLSCQASQSISTALAWYQQKPGQAPRLLIYAASTLASGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQGYSSSNLDNVFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGFSLSSYGVSWVRQAPGQGLEWMGAISYDGITYYASWAKSRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARGDYYDDYVYVYALDIWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK | EIVLTQSPGTLSLSPGERATLSCQASQSISTALAWYQQKPGQAPRLLIYAASTLASGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQGYSSSNLDNVFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.792152 | 22.984957 | 232 | 217 | 223 | 217 | 223 | 217 | 109 | h22b3 fab heavy chain | h22b3 fab light chain | homo sapiens | homo sapiens | C | protein | b- and t-lymphocyte attenuator | homo sapiens | 50 | 21 | 0.78 | HL | train |
8hhy_H_L | 8hhy | sars-cov-2 delta spike in complex with is-9a | yes | viral protein/immune system | 2022-11-17 | 2023-02-01 | electron microscopy | 2.77 | N.A. | N.A. | 36658148 | 10.1038/s41467-023-35949-8 | 0 | auth_asym_id | VH:VL | IGHV5 | IGKV1 | H | L | QVQLVQSGAEVKKPGESLRISCKGSGYSFTNYWISWVRQMPGKGLEWMGRIDPSDSYINYSPSFQGHATISADKSISTAYLQWGSLKASDTAMYYCARGRNYLDSRGRFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKSGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDSLGFTFGPGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVQSGAEVKKPGESLRISCKGSGYSFTNYWISWVRQMPGKGLEWMGRIDPSDSYINYSPSFQGHATISADKSISTAYLQWGSLKASDTAMYYCARGRNYLDSRGRFDYWGQGTLVTV | IVMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKSGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYD | 14.823092 | 13.68322 | 225 | 214 | 118 | 91 | 118 | 91 | 61 | is-9a fab heavy chain | is-9a fab light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 39 | 8 | 0.47 | HL | train |
8hhy_F_W | 8hhy | sars-cov-2 delta spike in complex with is-9a | yes | viral protein/immune system | 2022-11-17 | 2023-02-01 | electron microscopy | 2.77 | N.A. | N.A. | 36658148 | 10.1038/s41467-023-35949-8 | 0 | auth_asym_id | VH:VL | IGHV5 | IGKV1 | F | W | QVQLVQSGAEVKKPGESLRISCKGSGYSFTNYWISWVRQMPGKGLEWMGRIDPSDSYINYSPSFQGHATISADKSISTAYLQWGSLKASDTAMYYCARGRNYLDSRGRFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKSGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDSLGFTFGPGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGESLRISCKGSGYSFTNYWISWVRQMPGKGLEWMGRIDPSDSYINYSPSFQGHATISADKSISTAYLQWGSLKASDTAMYYCARGRNYLDSRGRFDYWGQGTLVTVS | DIVMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKSGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDSLGFTFGPGTKVEIR | 14.378031 | 14.348354 | 225 | 214 | 121 | 107 | 121 | 107 | 37 | is-9a fab heavy chain | is-9a fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 45 | 16 | 0.76 | HL | train |
8hhy_G_I | 8hhy | sars-cov-2 delta spike in complex with is-9a | yes | viral protein/immune system | 2022-11-17 | 2023-02-01 | electron microscopy | 2.77 | N.A. | N.A. | 36658148 | 10.1038/s41467-023-35949-8 | 0 | auth_asym_id | VH:VL | N.A. | IGKV1 | G | I | QVQLVQSGAEVKKPGESLRISCKGSGYSFTNYWISWVRQMPGKGLEWMGRIDPSDSYINYSPSFQGHATISADKSISTAYLQWGSLKASDTAMYYCARGRNYLDSRGRFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKSGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDSLGFTFGPGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | SLRISCKGSGYSFTNYWISWVRQMPGKGLEWMGRIDPSDSYINYSPSFQGHATISADKSISTAYLQWGSLKASDTAMYYCARGRNY | DIVMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKSGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDSLGFTFGPGTKV | 13.444427 | 14.12545 | 225 | 214 | 86 | 98 | 86 | 104 | 34 | is-9a fab heavy chain | is-9a fab light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 20 | 6 | 0.55 | HL | train |
8hhz_G_H | 8hhz | sars-cov-2 omicron ba.1 spike in complex with iy-2a | yes | viral protein/immune system | 2022-11-17 | 2023-02-01 | electron microscopy | 4.28 | N.A. | N.A. | 36658148 | 10.1038/s41467-023-35949-8 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV6 | G | H | QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 24.809294 | 20.627195 | 224 | 216 | 223 | 212 | 223 | 212 | 97 | iy-2a fab heavy chain | iy-2a fab light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 47 | 18 | 0.69 | HL | train |
8hhz_E_F | 8hhz | sars-cov-2 omicron ba.1 spike in complex with iy-2a | yes | viral protein/immune system | 2022-11-17 | 2023-02-01 | electron microscopy | 4.28 | N.A. | N.A. | 36658148 | 10.1038/s41467-023-35949-8 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV6 | E | F | QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 24.751554 | 20.488192 | 224 | 216 | 223 | 212 | 223 | 212 | 96 | iy-2a fab heavy chain | iy-2a fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 45 | 20 | 0.83 | HL | train |
8hhz_I_J | 8hhz | sars-cov-2 omicron ba.1 spike in complex with iy-2a | yes | viral protein/immune system | 2022-11-17 | 2023-02-01 | electron microscopy | 4.28 | N.A. | N.A. | 36658148 | 10.1038/s41467-023-35949-8 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV6 | I | J | QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 24.681963 | 20.593388 | 224 | 216 | 223 | 212 | 223 | 212 | 85 | iy-2a fab heavy chain | iy-2a fab light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 55 | 23 | 0.79 | HL | train |
8f6x_F | 8f6x | cryo-em structure of a structurally designed human metapneumovirus f protein in complex with antibody mpe8 | yes | viral protein/immune system | 2022-11-17 | 2023-08-02 | electron microscopy | 3.25 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | F | N.A. | MELGLRWVFLVAILEGVQCEVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSSGTGGSGGGGSGGGGSGGGASQSVVTQTPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRNLSGVFGTGTKVTVLGSGENLYFQSGGSGGHHHHHHHHSAWSHPQFEK | N.A. | VQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSSGTGGSGGGGSGGGGSGGGASQSVVTQTPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRNLSGVFGTGTKVTVL | N.A. | 17.350338 | 0 | 306 | 0 | 231 | 0 | 253 | 0 | 0 | mpe8 single chain variable fragment | N.A. | homo sapiens | N.A. | A;B | protein;protein | structurally designed hmpv f protein hmpv_v3b_d12_ds454,fibritin;structurally designed hmpv f protein hmpv_v3b_d12_ds454,fibritin | human metapneumovirus;human metapneumovirus | 59;22 | 24;8 | 0.89;0.89 | H_only | train |
8f6x_E | 8f6x | cryo-em structure of a structurally designed human metapneumovirus f protein in complex with antibody mpe8 | yes | viral protein/immune system | 2022-11-17 | 2023-08-02 | electron microscopy | 3.25 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MELGLRWVFLVAILEGVQCEVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSSGTGGSGGGGSGGGGSGGGASQSVVTQTPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRNLSGVFGTGTKVTVLGSGENLYFQSGGSGGHHHHHHHHSAWSHPQFEK | N.A. | VQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSSGTGGSGGGGSGGGGSGGGASQSVVTQTPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRNLSGVFGTGTKVTVL | N.A. | 17.318228 | 0 | 306 | 0 | 231 | 0 | 253 | 0 | 0 | mpe8 single chain variable fragment | N.A. | homo sapiens | N.A. | A;C | protein;protein | structurally designed hmpv f protein hmpv_v3b_d12_ds454,fibritin;structurally designed hmpv f protein hmpv_v3b_d12_ds454,fibritin | human metapneumovirus;human metapneumovirus | 22;60 | 8;24 | 0.8;0.83 | H_only | train |
8f6x_D | 8f6x | cryo-em structure of a structurally designed human metapneumovirus f protein in complex with antibody mpe8 | yes | viral protein/immune system | 2022-11-17 | 2023-08-02 | electron microscopy | 3.25 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | D | N.A. | MELGLRWVFLVAILEGVQCEVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSSGTGGSGGGGSGGGGSGGGASQSVVTQTPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRNLSGVFGTGTKVTVLGSGENLYFQSGGSGGHHHHHHHHSAWSHPQFEK | N.A. | VQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSSGTGGSGGGGSGGGGSGGGASQSVVTQTPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRNLSGVFGTGTKVTVL | N.A. | 17.347027 | 0 | 306 | 0 | 231 | 0 | 253 | 0 | 0 | mpe8 single chain variable fragment | N.A. | homo sapiens | N.A. | B;C | protein;protein | structurally designed hmpv f protein hmpv_v3b_d12_ds454,fibritin;structurally designed hmpv f protein hmpv_v3b_d12_ds454,fibritin | human metapneumovirus;human metapneumovirus | 59;21 | 25;6 | 0.93;0.75 | H_only | train |
8f6u_A | 8f6u | crystal structure of nanobody vhh113 bound to its antigen pa14 cif | no | immune system | 2022-11-17 | 2024-03-13 | x-ray diffraction | 1.7 | 0.199 | 0.176 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | MAEVQLVESGGGLVPAGGSLRLSCTTSERAFRSNAMGWFRQAPGKEREFVAAVSVLSWSGDSAVVADSVAGRFTIFRDNAKNTVYLQMNSLKPEDTAVYYCNGASDIGALQSGASSWSWGHGTQVTVSSGQAGQHHHHHHGAYPYDVPDYASGS | N.A. | VQLVESGGGLVPAGGSLRLSCTTSERAFRSNAMGWFRQAPGKEREFVAAVSVLSWSGDSAVVADSVAGRFTIFRDNAKNTVYLQMNSLKPEDTAVYYCNGASDIGALQSGASSWSWGHGTQVTVSS | N.A. | 13.757746 | 0 | 154 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody vhh113 | N.A. | vicugna pacos | N.A. | C | protein | cftr inhibitory factor | pseudomonas aeruginosa pa14 | 46 | 13 | 0.81 | H_only | train |
8f6u_B | 8f6u | crystal structure of nanobody vhh113 bound to its antigen pa14 cif | no | immune system | 2022-11-17 | 2024-03-13 | x-ray diffraction | 1.7 | 0.199 | 0.176 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | MAEVQLVESGGGLVPAGGSLRLSCTTSERAFRSNAMGWFRQAPGKEREFVAAVSVLSWSGDSAVVADSVAGRFTIFRDNAKNTVYLQMNSLKPEDTAVYYCNGASDIGALQSGASSWSWGHGTQVTVSSGQAGQHHHHHHGAYPYDVPDYASGS | N.A. | LVESGGGLVPAGGSLRLSCTTSERAFRSNAMGWFRQAPGKEREFVAAVSVLSWSGDSAVVADSVAGRFTIFRDNAKNTVYLQMNSLKPEDTAVYYCNGASDIGALQSGASSWSWGHGTQVTVSS | N.A. | 13.732244 | 0 | 154 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody vhh113 | N.A. | vicugna pacos | N.A. | D | protein | cftr inhibitory factor | pseudomonas aeruginosa pa14 | 47 | 13 | 0.76 | H_only | train |
8f6v_A | 8f6v | crystal structure of nanobody vhh108 bound to its antigen pa14 cif | no | immune system | 2022-11-17 | 2024-03-13 | x-ray diffraction | 2.3 | 0.21 | 0.181 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | MAEVQLVESGGGLVQPGGSLRLSCEATGNFDDRGIGWFRQAPGKEREGIACITTRGRTHYAESVEGRFTISTDIANNAVYLQMNSLKPEDTAVYYCAKAIRLTTDRTQCVAFPGVSWGRGTQVTVSSGQAGQ | N.A. | VQLVESGGGLVQPGGSLRLSCEATGNFDDRGIGWFRQAPGKEREGIACITTRGRTHYAESVEGRFTISTDIANNAVYLQMNSLKPEDTAVYYCAKAIRLTTDRTQCVAFPGVSWGRGTQVTVS | N.A. | 13.615992 | 0 | 132 | 0 | 123 | 0 | 123 | 0 | 0 | nanobody vhh108 | N.A. | vicugna pacos | N.A. | C | protein | cftr inhibitory factor | pseudomonas aeruginosa pa14 | 36 | 16 | 0.89 | H_only | train |
8f6v_B | 8f6v | crystal structure of nanobody vhh108 bound to its antigen pa14 cif | no | immune system | 2022-11-17 | 2024-03-13 | x-ray diffraction | 2.3 | 0.21 | 0.181 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | MAEVQLVESGGGLVQPGGSLRLSCEATGNFDDRGIGWFRQAPGKEREGIACITTRGRTHYAESVEGRFTISTDIANNAVYLQMNSLKPEDTAVYYCAKAIRLTTDRTQCVAFPGVSWGRGTQVTVSSGQAGQ | N.A. | VQLVESGGGLVQPGGSLRLSCEATGNFDDRGIGWFRQAPGKEREGIACITTRGRTHYAESVEGRFTISTDIANNAVYLQMNSLKPEDTAVYYCAKAIRLTTDRTQCVAFPGVSWGRGTQVTV | N.A. | 13.559548 | 0 | 132 | 0 | 122 | 0 | 122 | 0 | 0 | nanobody vhh108 | N.A. | vicugna pacos | N.A. | D | protein | cftr inhibitory factor | pseudomonas aeruginosa pa14 | 35 | 15 | 0.88 | H_only | train |
8f76_N | 8f76 | human olfactory receptor or51e2 bound to propionate in complex with minigs399 | no | membrane protein | 2022-11-18 | 2023-03-22 | electron microscopy | 3.1 | N.A. | N.A. | 36922591 | 10.1038/s41586-023-05798-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSLEVLFQGPGHHHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.459084 | 0 | 145 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | X;Y | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 53;35 | 14;12 | 0.54;0.71 | H_only | train |
8f7q_E | 8f7q | gi bound mu-opioid receptor in complex with beta-endorphin | no | signaling protein | 2022-11-20 | 2022-12-14 | electron microscopy | 3.22 | N.A. | N.A. | 36638794 | 10.1016/j.cell.2022.12.026 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.556545 | 0 | 248 | 0 | 233 | 0 | 247 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 33;26 | 21;12 | 0.95;0.86 | H_only | train |
8f7r_E | 8f7r | gi bound mu-opioid receptor in complex with endomorphin | no | signaling protein | 2022-11-20 | 2022-12-14 | electron microscopy | 3.28 | N.A. | N.A. | 36638794 | 10.1016/j.cell.2022.12.026 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.499891 | 0 | 248 | 0 | 231 | 0 | 247 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 34;25 | 21;11 | 0.91;0.85 | H_only | train |
8hii_H_L | 8hii | the bril-slc19a1/fab/nb ternary complex | no | transport protein | 2022-11-20 | 2022-12-21 | electron microscopy | 3.57 | N.A. | N.A. | 36575193 | 10.1038/s41421-022-00508-w | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | MGWSLILLFLVAVATRVLSEISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKSNSLEVLFQ | MGWSCIILFLVATATGVHSSDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.613167 | 22.768066 | 260 | 235 | 225 | 212 | 225 | 212 | 111 | anti-bril fab heavy chain | anti-bril fab light chain | homo sapiens | homo sapiens | A | protein | bril-slc19a1 chimera | escherichia coli | 40 | 15 | 0.83 | HL | train |
8hii_N | 8hii | the bril-slc19a1/fab/nb ternary complex | no | transport protein | 2022-11-20 | 2022-12-21 | electron microscopy | 3.57 | N.A. | N.A. | 36575193 | 10.1038/s41421-022-00508-w | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAGSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSSLEHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 14.055288 | 0 | 153 | 0 | 120 | 0 | 120 | 0 | 0 | anti-fab nanobody | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8hik_H_L | 8hik | the tpp-bound bril-slc19a1/fab/nb ternary complex | no | transport protein | 2022-11-20 | 2022-12-21 | electron microscopy | 3.72 | N.A. | N.A. | 36575193 | 10.1038/s41421-022-00508-w | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | MGWSLILLFLVAVATRVLSEISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKSNSLEVLFQ | MGWSCIILFLVATATGVHSSDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.219303 | 22.4304 | 260 | 235 | 225 | 212 | 225 | 212 | 110 | anti-bril fab heavy chain | anti-bril fab light chain | homo sapiens | homo sapiens | A | protein | bril-slc19a1 chimera | escherichia coli | 43 | 19 | 0.83 | HL | train |
8hik_N | 8hik | the tpp-bound bril-slc19a1/fab/nb ternary complex | no | transport protein | 2022-11-20 | 2022-12-21 | electron microscopy | 3.72 | N.A. | N.A. | 36575193 | 10.1038/s41421-022-00508-w | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAGSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSSLEHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 14.01717 | 0 | 153 | 0 | 120 | 0 | 120 | 0 | 0 | anti-fab nanobody | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8f7z_A_B | 8f7z | vrc34.01_mm28 bound to fusion peptide | no | viral protein | 2022-11-21 | 2023-11-01 | x-ray diffraction | 2.7 | 0.243 | 0.21 | 37989731 | 10.1038/s41467-023-42098-5 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | A | B | QKVLVQSGAEVKKPGASVKVSCRAFGYTFTGNPLHWVRQAPGQGLEWLGWINPHSGDTFTSQKFQGRVYMTRDKSINTAFLDVTRLTSDDTGIYYCARDKYYGNEAVGMDVWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | DIQLTQSPSFLSASVGDKVTITCRASQGVRNELAWYQQKPGKAPNLLIYYASTLQSGVPSRFSATGSGTHFTLTVSSLQPEDFATYFCQHMSSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | KVLVQSGAEVKKPGASVKVSCRAFGYTFTGNPLHWVRQAPGQGLEWLGWINPHSGDTFTSQKFQGRVYMTRDKSINTAFLDVTRLTSDDTGIYYCARDKYYGNEAVGMDVWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQLTQSPSFLSASVGDKVTITCRASQGVRNELAWYQQKPGKAPNLLIYYASTLQSGVPSRFSATGSGTHFTLTVSSLQPEDFATYFCQHMSSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.648869 | 23.130783 | 234 | 214 | 213 | 212 | 221 | 212 | 91 | vrc34_mm28 heavy chain | vrc34_m228 light chain | homo sapiens | homo sapiens | I | peptide | hiv-1 env fusion peptide | human immunodeficiency virus 1 | 30 | 19 | 0.86 | HL | train |
8f7z_C_D | 8f7z | vrc34.01_mm28 bound to fusion peptide | no | viral protein | 2022-11-21 | 2023-11-01 | x-ray diffraction | 2.7 | 0.243 | 0.21 | 37989731 | 10.1038/s41467-023-42098-5 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | C | D | QKVLVQSGAEVKKPGASVKVSCRAFGYTFTGNPLHWVRQAPGQGLEWLGWINPHSGDTFTSQKFQGRVYMTRDKSINTAFLDVTRLTSDDTGIYYCARDKYYGNEAVGMDVWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | DIQLTQSPSFLSASVGDKVTITCRASQGVRNELAWYQQKPGKAPNLLIYYASTLQSGVPSRFSATGSGTHFTLTVSSLQPEDFATYFCQHMSSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | KVLVQSGAEVKKPGASVKVSCRAFGYTFTGNPLHWVRQAPGQGLEWLGWINPHSGDTFTSQKFQGRVYMTRDKSINTAFLDVTRLTSDDTGIYYCARDKYYGNEAVGMDVWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQLTQSPSFLSASVGDKVTITCRASQGVRNELAWYQQKPGKAPNLLIYYASTLQSGVPSRFSATGSGTHFTLTVSSLQPEDFATYFCQHMSSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.672539 | 23.152048 | 234 | 214 | 213 | 212 | 221 | 212 | 93 | vrc34_mm28 heavy chain | vrc34_m228 light chain | homo sapiens | homo sapiens | K | peptide | hiv-1 env fusion peptide | human immunodeficiency virus 1 | 29 | 18 | 0.86 | HL | train |
8f7z_E_F | 8f7z | vrc34.01_mm28 bound to fusion peptide | no | viral protein | 2022-11-21 | 2023-11-01 | x-ray diffraction | 2.7 | 0.243 | 0.21 | 37989731 | 10.1038/s41467-023-42098-5 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | E | F | QKVLVQSGAEVKKPGASVKVSCRAFGYTFTGNPLHWVRQAPGQGLEWLGWINPHSGDTFTSQKFQGRVYMTRDKSINTAFLDVTRLTSDDTGIYYCARDKYYGNEAVGMDVWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | DIQLTQSPSFLSASVGDKVTITCRASQGVRNELAWYQQKPGKAPNLLIYYASTLQSGVPSRFSATGSGTHFTLTVSSLQPEDFATYFCQHMSSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | KVLVQSGAEVKKPGASVKVSCRAFGYTFTGNPLHWVRQAPGQGLEWLGWINPHSGDTFTSQKFQGRVYMTRDKSINTAFLDVTRLTSDDTGIYYCARDKYYGNEAVGMDVWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQLTQSPSFLSASVGDKVTITCRASQGVRNELAWYQQKPGKAPNLLIYYASTLQSGVPSRFSATGSGTHFTLTVSSLQPEDFATYFCQHMSSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.675255 | 23.169498 | 234 | 214 | 213 | 212 | 221 | 212 | 95 | vrc34_mm28 heavy chain | vrc34_m228 light chain | homo sapiens | homo sapiens | L | peptide | hiv-1 env fusion peptide | human immunodeficiency virus 1 | 28 | 17 | 0.85 | HL | train |
8f7z_G_H | 8f7z | vrc34.01_mm28 bound to fusion peptide | no | viral protein | 2022-11-21 | 2023-11-01 | x-ray diffraction | 2.7 | 0.243 | 0.21 | 37989731 | 10.1038/s41467-023-42098-5 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | G | H | QKVLVQSGAEVKKPGASVKVSCRAFGYTFTGNPLHWVRQAPGQGLEWLGWINPHSGDTFTSQKFQGRVYMTRDKSINTAFLDVTRLTSDDTGIYYCARDKYYGNEAVGMDVWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | DIQLTQSPSFLSASVGDKVTITCRASQGVRNELAWYQQKPGKAPNLLIYYASTLQSGVPSRFSATGSGTHFTLTVSSLQPEDFATYFCQHMSSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | KVLVQSGAEVKKPGASVKVSCRAFGYTFTGNPLHWVRQAPGQGLEWLGWINPHSGDTFTSQKFQGRVYMTRDKSINTAFLDVTRLTSDDTGIYYCARDKYYGNEAVGMDVWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQLTQSPSFLSASVGDKVTITCRASQGVRNELAWYQQKPGKAPNLLIYYASTLQSGVPSRFSATGSGTHFTLTVSSLQPEDFATYFCQHMSSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.667177 | 23.12614 | 234 | 214 | 213 | 212 | 221 | 212 | 93 | vrc34_mm28 heavy chain | vrc34_m228 light chain | homo sapiens | homo sapiens | M | peptide | hiv-1 env fusion peptide | human immunodeficiency virus 1 | 30 | 19 | 0.86 | HL | train |
8hj2_N | 8hj2 | gpr21 wt with g15 complex | yes | structural protein | 2022-11-22 | 2023-03-15 | electron microscopy | 3.8 | N.A. | N.A. | 36639690 | 10.1038/s41467-023-35882-w | 0 | auth_asym_id | VH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.688986 | 0 | 149 | 0 | 126 | 0 | 126 | 0 | 0 | nb35 | N.A. | homo sapiens | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short | homo sapiens;homo sapiens | 26;46 | 10;14 | 0.83;0.58 | H_only | train |
8f8w_D | 8f8w | crystal structure of nb.x0 bound to the afucosylated human igg1 fragment crystal form i | no | immune system | 2022-11-22 | 2023-03-29 | x-ray diffraction | 2.71 | 0.241 | 0.208 | 37202422 | 10.1038/s41467-023-38453-1 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | 13.599214 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | nb.x0 | N.A. | camelidae mixed library | N.A. | A | protein | afucosylated igg1 fragment | homo sapiens | 25 | 13 | 0.72 | H_only | train |
8f8w_C | 8f8w | crystal structure of nb.x0 bound to the afucosylated human igg1 fragment crystal form i | no | immune system | 2022-11-22 | 2023-03-29 | x-ray diffraction | 2.71 | 0.241 | 0.208 | 37202422 | 10.1038/s41467-023-38453-1 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | 13.649797 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | nb.x0 | N.A. | camelidae mixed library | N.A. | A;B | protein;protein | afucosylated igg1 fragment;afucosylated igg1 fragment | homo sapiens;homo sapiens | 15;26 | 5;13 | 0.71;0.72 | H_only | train |
8f8w_H | 8f8w | crystal structure of nb.x0 bound to the afucosylated human igg1 fragment crystal form i | no | immune system | 2022-11-22 | 2023-03-29 | x-ray diffraction | 2.71 | 0.241 | 0.208 | 37202422 | 10.1038/s41467-023-38453-1 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | 13.678299 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | nb.x0 | N.A. | camelidae mixed library | N.A. | E | protein | afucosylated igg1 fragment | homo sapiens | 23 | 12 | 0.75 | H_only | train |
8f8w_G | 8f8w | crystal structure of nb.x0 bound to the afucosylated human igg1 fragment crystal form i | no | immune system | 2022-11-22 | 2023-03-29 | x-ray diffraction | 2.71 | 0.241 | 0.208 | 37202422 | 10.1038/s41467-023-38453-1 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | 13.548253 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | nb.x0 | N.A. | camelidae mixed library | N.A. | F | protein | afucosylated igg1 fragment | homo sapiens | 24 | 12 | 0.71 | H_only | train |
8f8x_D | 8f8x | crystal structure of nb.x0 bound to the afucosylated human igg1 fragment crystal form ii | no | immune system | 2022-11-22 | 2023-03-29 | x-ray diffraction | 2.6 | 0.285 | 0.215 | 37202422 | 10.1038/s41467-023-38453-1 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | 13.662001 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | nb.x0 | N.A. | camelidae mixed library | N.A. | A | protein | uncharacterized protein dkfzp686c11235 | homo sapiens | 25 | 13 | 0.72 | H_only | train |
8f8x_C | 8f8x | crystal structure of nb.x0 bound to the afucosylated human igg1 fragment crystal form ii | no | immune system | 2022-11-22 | 2023-03-29 | x-ray diffraction | 2.6 | 0.285 | 0.215 | 37202422 | 10.1038/s41467-023-38453-1 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASPGISRYKTMGWYRQAPGKERSFVAAITWGGLTYYADSVKGRFTVSRDNAKNTVYLQMNSLKPEDTAVYYCSVDGGTRADPYHYYWGQGTQVTVSS | N.A. | 13.594338 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | nb.x0 | N.A. | camelidae mixed library | N.A. | A;B | protein;protein | uncharacterized protein dkfzp686c11235;uncharacterized protein dkfzp686c11235 | homo sapiens;homo sapiens | 14;25 | 5;13 | 0.71;0.72 | H_only | train |
8hj5_C | 8hj5 | cryo-em structure of gq-coupled mrgprx1 bound with compound-16 | yes | signaling protein | 2022-11-22 | 2023-05-31 | electron microscopy | 3 | N.A. | N.A. | 37347749 | 10.1371/journal.pbio.3001975 | 0 | auth_asym_id | scFv | N.A. | N.A. | C | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.564693 | 0 | 259 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 31;23 | 19;10 | 0.95;0.83 | H_only | train |
8hj5_E | 8hj5 | cryo-em structure of gq-coupled mrgprx1 bound with compound-16 | yes | signaling protein | 2022-11-22 | 2023-05-31 | electron microscopy | 3 | N.A. | N.A. | 37347749 | 10.1371/journal.pbio.3001975 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS | N.A. | 13.870303 | 0 | 157 | 0 | 127 | 0 | 127 | 0 | 0 | nb35 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 41;29 | 11;11 | 0.52;0.73 | H_only | train |
8hj1_N | 8hj1 | gpr21(wt) and gs complex | yes | structural protein | 2022-11-22 | 2023-12-27 | electron microscopy | 3.27 | N.A. | N.A. | 36639690 | 10.1038/s41467-023-35882-w | 0 | auth_asym_id | VH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.664989 | 0 | 149 | 0 | 126 | 0 | 126 | 0 | 0 | nb35 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 50;30 | 17;10 | 0.65;0.71 | H_only | train |
8f9e_A_B | 8f9e | crystal structure of ky15.2 fab in complex with circumsporozoite protein kqpa peptide | no | immune system | 2022-11-23 | 2023-11-01 | x-ray diffraction | 2.95 | 0.241 | 0.216 | 38007690 | 10.1016/j.celrep.2023.113330 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | QVLLVESGGGVVQPGTSLRLSCVASGFSFSTYGMHWVRQSPGKGLEWVAIIWYDGGNKFYADSVQGRFTVSRDNSKNTLYLQMNSLRAEDTAVYYCAKAYRTSLDKKYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSTLSASVGDRVTITCRASQSIASWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLHPDDFATYFCQQFTSYWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVLLVESGGGVVQPGTSLRLSCVASGFSFSTYGMHWVRQSPGKGLEWVAIIWYDGGNKFYADSVQGRFTVSRDNSKNTLYLQMNSLRAEDTAVYYCAKAYRTSLDKKYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSTLSASVGDRVTITCRASQSIASWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLHPDDFATYFCQQFTSYWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.386095 | 23.00226 | 226 | 213 | 226 | 213 | 226 | 213 | 100 | ky15.2 antibody, heavy chain | ky15.2 antibody, light chain | mus musculus | mus musculus | C | peptide | circumsporozoite protein kqpa peptide | plasmodium falciparum (isolate nf54) | 31 | 20 | 0.91 | HL | train |
8f9e_H_L | 8f9e | crystal structure of ky15.2 fab in complex with circumsporozoite protein kqpa peptide | no | immune system | 2022-11-23 | 2023-11-01 | x-ray diffraction | 2.95 | 0.241 | 0.216 | 38007690 | 10.1016/j.celrep.2023.113330 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | QVLLVESGGGVVQPGTSLRLSCVASGFSFSTYGMHWVRQSPGKGLEWVAIIWYDGGNKFYADSVQGRFTVSRDNSKNTLYLQMNSLRAEDTAVYYCAKAYRTSLDKKYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSTLSASVGDRVTITCRASQSIASWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLHPDDFATYFCQQFTSYWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVLLVESGGGVVQPGTSLRLSCVASGFSFSTYGMHWVRQSPGKGLEWVAIIWYDGGNKFYADSVQGRFTVSRDNSKNTLYLQMNSLRAEDTAVYYCAKAYRTSLDKKYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSTLSASVGDRVTITCRASQSIASWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLHPDDFATYFCQQFTSYWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.308899 | 22.886955 | 226 | 213 | 226 | 213 | 226 | 213 | 105 | ky15.2 antibody, heavy chain | ky15.2 antibody, light chain | mus musculus | mus musculus | P | peptide | circumsporozoite protein kqpa peptide | plasmodium falciparum (isolate nf54) | 31 | 20 | 0.91 | HL | train |
8f9f_A_B | 8f9f | crystal structure of ky15.2 fab in complex with circumsporozoite protein nanp3 peptide | no | immune system | 2022-11-23 | 2023-11-01 | x-ray diffraction | 2.2 | 0.24 | 0.213 | 38007690 | 10.1016/j.celrep.2023.113330 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | QVLLVESGGGVVQPGTSLRLSCVASGFSFSTYGMHWVRQSPGKGLEWVAIIWYDGGNKFYADSVQGRFTVSRDNSKNTLYLQMNSLRAEDTAVYYCAKAYRTSLDKKYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSTLSASVGDRVTITCRASQSIASWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLHPDDFATYFCQQFTSYWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVLLVESGGGVVQPGTSLRLSCVASGFSFSTYGMHWVRQSPGKGLEWVAIIWYDGGNKFYADSVQGRFTVSRDNSKNTLYLQMNSLRAEDTAVYYCAKAYRTSLDKKYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSTLSASVGDRVTITCRASQSIASWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLHPDDFATYFCQQFTSYWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.343533 | 22.810457 | 226 | 213 | 226 | 213 | 226 | 213 | 103 | ky15.2 antibody, heavy chain | ky15.2 antibody, light chain | mus musculus | mus musculus | C | peptide | circumsporozoite protein nanp peptide | plasmodium falciparum (isolate nf54) | 35 | 22 | 0.92 | HL | train |
8f9f_H_L | 8f9f | crystal structure of ky15.2 fab in complex with circumsporozoite protein nanp3 peptide | no | immune system | 2022-11-23 | 2023-11-01 | x-ray diffraction | 2.2 | 0.24 | 0.213 | 38007690 | 10.1016/j.celrep.2023.113330 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | QVLLVESGGGVVQPGTSLRLSCVASGFSFSTYGMHWVRQSPGKGLEWVAIIWYDGGNKFYADSVQGRFTVSRDNSKNTLYLQMNSLRAEDTAVYYCAKAYRTSLDKKYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSTLSASVGDRVTITCRASQSIASWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLHPDDFATYFCQQFTSYWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVLLVESGGGVVQPGTSLRLSCVASGFSFSTYGMHWVRQSPGKGLEWVAIIWYDGGNKFYADSVQGRFTVSRDNSKNTLYLQMNSLRAEDTAVYYCAKAYRTSLDKKYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSTLSASVGDRVTITCRASQSIASWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLHPDDFATYFCQQFTSYWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.330679 | 22.89732 | 226 | 213 | 226 | 213 | 226 | 213 | 103 | ky15.2 antibody, heavy chain | ky15.2 antibody, light chain | mus musculus | mus musculus | P | peptide | circumsporozoite protein nanp peptide | plasmodium falciparum (isolate nf54) | 34 | 21 | 0.91 | HL | train |
8f92_H_L | 8f92 | hiv env bg505_md39_b11 sosip boosting trimer in complex with b11_d77.7 mouse fab and rm20a3 fab | no | viral protein/immune system | 2022-11-23 | 2024-05-15 | electron microscopy | 3.14 | N.A. | N.A. | 38753770 | 10.1126/science.adk0582 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQLQESGPGLVQPSGTLSLTCAVSGDSISSNNWWTWVRQPPGKGLEWIGEIYQSGITKYNPSLKSRVSTSVDKSKNQFSLRLSSVTAADTAVYYCARSAISIFGVVVLGEYYYNGMDVWGQGTTVTVSS | DIQMTQSPASQSVSVGETVTITCRVSENIYSHLAWYQQKQGKSPQLLVYGATNLADGVPSRFSGSGSGTQYSLKINNLQSEDFGSYYCQHFWDAPYTFGGGTKLEIK | QVQLQESGPGLVQPSGTLSLTCAVSGDSISSNNWWTWVRQPPGKGLEWIGEIYQSGITKYNPSLKSRVSTSVDKSKNQFSLRLSSVTAADTAVYYCARSAISIFGVVVLGEYYYNGMDVWGQGTTVTV | DIQMTQSPASQSVSVGETVTITCRVSENIYSHLAWYQQKQGKSPQLLVYGATNLADGVPSRFSGSGSGTQYSLKINNLQSEDFGSYYCQHFWDAPYTFGGGTKLE | 14.4253 | 13.140615 | 130 | 107 | 128 | 105 | 128 | 105 | 41 | b11_d77.7 fab heavy chain | b11_d77.7 fab kappa light chain | mus musculus | mus musculus | A | protein | bg505_md39_b11 gp120 | human immunodeficiency virus | 27 | 13 | 1 | HL | train |
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