PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8yaf_V | 8yaf | sod1, nanobody1 and nanobody2 complex | no | oxidoreductase/immune system | 2024-02-09 | 2025-05-21 | x-ray diffraction | 3.28 | 0.249 | 0.2 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | V | N.A. | SQVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | SQVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | 14.156687 | 0 | 131 | 0 | 131 | 0 | 131 | 0 | 0 | nb2 | N.A. | camelus dromedarius | N.A. | T | protein | superoxide dismutase [cu-zn] | homo sapiens | 28 | 14 | 0.88 | H_only | train |
8yat_B | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLQESGGGLVQPGGSLRLSCRASETLFSLYAMGWYRQAPGKQPELIATISGGGEGTGNYADPVKGRFTISRNNADNMVFLQMNNLKPEDTAVYYCNVYGTNLAPWGQGTQVTVSS | N.A. | QLQESGGGLVQPGGSLRLSCRASETLFSLYAMGWYRQAPGKQPELIATISGGGEGTGNYADPVKGRFTISRNNADNMVFLQMNNLKPEDTAVYYCNVYGTNLAPWGQGTQVTVSS | N.A. | 13.252968 | 0 | 117 | 0 | 115 | 0 | 115 | 0 | 0 | nb1 | N.A. | vicugna pacos | N.A. | A | protein | superoxide dismutase [cu-zn] | homo sapiens | 40 | 10 | 0.48 | H_only | train |
8yat_C | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | QVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | 14.104976 | 0 | 130 | 0 | 130 | 0 | 130 | 0 | 0 | nb2 | N.A. | camelus dromedarius | N.A. | A | protein | superoxide dismutase [cu-zn] | homo sapiens | 27 | 14 | 1 | H_only | train |
8yat_D | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | LQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | 13.679601 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | nb3 | N.A. | camelus dromedarius | N.A. | A | protein | superoxide dismutase [cu-zn] | homo sapiens | 46 | 21 | 0.95 | H_only | train |
8yat_F | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLQESGGGLVQPGGSLRLSCRASETLFSLYAMGWYRQAPGKQPELIATISGGGEGTGNYADPVKGRFTISRNNADNMVFLQMNNLKPEDTAVYYCNVYGTNLAPWGQGTQVTVSS | N.A. | QLQESGGGLVQPGGSLRLSCRASETLFSLYAMGWYRQAPGKQPELIATISGGGEGTGNYADPVKGRFTISRNNADNMVFLQMNNLKPEDTAVYYCNVYGTNLAPWGQGTQVTVSS | N.A. | 13.23472 | 0 | 117 | 0 | 115 | 0 | 115 | 0 | 0 | nb1 | N.A. | vicugna pacos | N.A. | E | protein | superoxide dismutase [cu-zn] | homo sapiens | 41 | 12 | 0.57 | H_only | train |
8yat_G | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | QVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | QVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | 14.061353 | 0 | 130 | 0 | 128 | 0 | 130 | 0 | 0 | nb2 | N.A. | camelus dromedarius | N.A. | E | protein | superoxide dismutase [cu-zn] | homo sapiens | 28 | 13 | 0.93 | H_only | train |
8yat_H | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | LQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | 13.70285 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | nb3 | N.A. | camelus dromedarius | N.A. | E | protein | superoxide dismutase [cu-zn] | homo sapiens | 46 | 19 | 0.95 | H_only | train |
8yat_J | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | J | N.A. | QVQLQESGGGLVQPGGSLRLSCRASETLFSLYAMGWYRQAPGKQPELIATISGGGEGTGNYADPVKGRFTISRNNADNMVFLQMNNLKPEDTAVYYCNVYGTNLAPWGQGTQVTVSS | N.A. | QLQESGGGLVQPGGSLRLSCRASETLFSLYAMGWYRQAPGKQPELIATISGGGEGTGNYADPVKGRFTISRNNADNMVFLQMNNLKPEDTAVYYCNVYGTNLAPWGQGTQVTVSS | N.A. | 13.249853 | 0 | 117 | 0 | 115 | 0 | 115 | 0 | 0 | nb1 | N.A. | vicugna pacos | N.A. | I | protein | superoxide dismutase [cu-zn] | homo sapiens | 42 | 12 | 0.55 | H_only | train |
8yat_K | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | QVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | QVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | 14.05002 | 0 | 130 | 0 | 129 | 0 | 130 | 0 | 0 | nb2 | N.A. | camelus dromedarius | N.A. | I | protein | superoxide dismutase [cu-zn] | homo sapiens | 30 | 14 | 0.88 | H_only | train |
8yat_L | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | L | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | LQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | 13.738257 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | nb3 | N.A. | camelus dromedarius | N.A. | I | protein | superoxide dismutase [cu-zn] | homo sapiens | 49 | 21 | 0.91 | H_only | train |
8yat_N | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCRASETLFSLYAMGWYRQAPGKQPELIATISGGGEGTGNYADPVKGRFTISRNNADNMVFLQMNNLKPEDTAVYYCNVYGTNLAPWGQGTQVTVSS | N.A. | QLQESGGGLVQPGGSLRLSCRASETLFSLYAMGWYRQAPGKQPELIATISGGGEGTGNYADPVKGRFTISRNNADNMVFLQMNNLKPEDTAVYYCNVYGTNLAPWGQGTQVTVSS | N.A. | 13.303718 | 0 | 117 | 0 | 115 | 0 | 115 | 0 | 0 | nb1 | N.A. | vicugna pacos | N.A. | M | protein | superoxide dismutase [cu-zn] | homo sapiens | 38 | 10 | 0.53 | H_only | train |
8yat_O | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | O | N.A. | QVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | QVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | 14.103135 | 0 | 130 | 0 | 129 | 0 | 130 | 0 | 0 | nb2 | N.A. | camelus dromedarius | N.A. | M | protein | superoxide dismutase [cu-zn] | homo sapiens | 31 | 16 | 0.89 | H_only | train |
8yat_P | 8yat | sod1, nanobody1, nanobody2 and nanobody3 complex | no | oxidoreductase/immune system | 2024-02-10 | 2025-02-12 | x-ray diffraction | 3.94 | 0.368 | 0.303 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | P | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | LQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | 13.731175 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | nb3 | N.A. | camelus dromedarius | N.A. | M | protein | superoxide dismutase [cu-zn] | homo sapiens | 47 | 20 | 0.91 | H_only | train |
8rz0_B | 8rz0 | synthetic immunogen rh5-34em bound to monoclonal antibody r5.016 | no | immune system | 2024-02-11 | 2024-07-17 | x-ray diffraction | 1.63 | 0.206 | 0.191 | 39223355 | 10.1038/s44321-024-00123-0 | 0 | auth_asym_id | scFv | N.A. | N.A. | B | N.A. | GQVQLVQSGAEVKKPGASVRVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYDGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDGPQVGDFDWQVYYYYGMDVWGQGTTVTVSSGGSGGGAIRMTQSPSTLSASVGDRVTITCRASQSINTWLAWYQQKPGKAPNLLISKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYFCQQYNSYLYTFGQGTKVEIRGTKH | N.A. | GQVQLVQSGAEVKKPGASVRVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYDGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDGPQVGDFDWQVYYYYGMDVWGQGTTVTVSSGGSGGGAIRMTQSPSTLSASVGDRVTITCRASQSINTWLAWYQQKPGKAPNLLISKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYFCQQYNSYLYTFGQGTKVEIRGTKH | N.A. | 17.80758 | 0 | 247 | 0 | 247 | 0 | 247 | 0 | 0 | r5.016 scfv | N.A. | homo sapiens | N.A. | A | protein | rh5-34em | synthetic construct | 51 | 22 | 0.92 | H_only | train |
8rz0_D | 8rz0 | synthetic immunogen rh5-34em bound to monoclonal antibody r5.016 | no | immune system | 2024-02-11 | 2024-07-17 | x-ray diffraction | 1.63 | 0.206 | 0.191 | 39223355 | 10.1038/s44321-024-00123-0 | 0 | auth_asym_id | scFv | N.A. | N.A. | D | N.A. | GQVQLVQSGAEVKKPGASVRVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYDGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDGPQVGDFDWQVYYYYGMDVWGQGTTVTVSSGGSGGGAIRMTQSPSTLSASVGDRVTITCRASQSINTWLAWYQQKPGKAPNLLISKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYFCQQYNSYLYTFGQGTKVEIRGTKH | N.A. | QVQLVQSGAEVKKPGASVRVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYDGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDGPQVGDFDWQVYYYYGMDVWGQGTTVTVSSGGSGGGAIRMTQSPSTLSASVGDRVTITCRASQSINTWLAWYQQKPGKAPNLLISKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYFCQQYNSYLYTFGQGTKVEIR | N.A. | 17.66733 | 0 | 247 | 0 | 242 | 0 | 242 | 0 | 0 | r5.016 scfv | N.A. | homo sapiens | N.A. | C | protein | rh5-34em | synthetic construct | 49 | 22 | 0.88 | H_only | train |
8rz0_F | 8rz0 | synthetic immunogen rh5-34em bound to monoclonal antibody r5.016 | no | immune system | 2024-02-11 | 2024-07-17 | x-ray diffraction | 1.63 | 0.206 | 0.191 | 39223355 | 10.1038/s44321-024-00123-0 | 0 | auth_asym_id | scFv | N.A. | N.A. | F | N.A. | GQVQLVQSGAEVKKPGASVRVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYDGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDGPQVGDFDWQVYYYYGMDVWGQGTTVTVSSGGSGGGAIRMTQSPSTLSASVGDRVTITCRASQSINTWLAWYQQKPGKAPNLLISKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYFCQQYNSYLYTFGQGTKVEIRGTKH | N.A. | QVQLVQSGAEVKKPGASVRVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYDGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDGPQVGDFDWQVYYYYGMDVWGQGTTVTVSSGGSGGGAIRMTQSPSTLSASVGDRVTITCRASQSINTWLAWYQQKPGKAPNLLISKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYFCQQYNSYLYTFGQGTKVEIRGT | N.A. | 17.697216 | 0 | 247 | 0 | 244 | 0 | 244 | 0 | 0 | r5.016 scfv | N.A. | homo sapiens | N.A. | E | protein | rh5-34em | synthetic construct | 57 | 24 | 0.86 | H_only | train |
8rz0_H | 8rz0 | synthetic immunogen rh5-34em bound to monoclonal antibody r5.016 | no | immune system | 2024-02-11 | 2024-07-17 | x-ray diffraction | 1.63 | 0.206 | 0.191 | 39223355 | 10.1038/s44321-024-00123-0 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | GQVQLVQSGAEVKKPGASVRVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYDGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDGPQVGDFDWQVYYYYGMDVWGQGTTVTVSSGGSGGGAIRMTQSPSTLSASVGDRVTITCRASQSINTWLAWYQQKPGKAPNLLISKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYFCQQYNSYLYTFGQGTKVEIRGTKH | N.A. | QVQLVQSGAEVKKPGASVRVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYDGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDGPQVGDFDWQVYYYYGMDVWGQGTTVTVSSGGSGGGAIRMTQSPSTLSASVGDRVTITCRASQSINTWLAWYQQKPGKAPNLLISKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYFCQQYNSYLYTFGQGTKVEIRG | N.A. | 17.585703 | 0 | 247 | 0 | 243 | 0 | 243 | 0 | 0 | r5.016 scfv | N.A. | homo sapiens | N.A. | G | protein | rh5-34em | synthetic construct | 49 | 22 | 0.88 | H_only | train |
8rz1_A | 8rz1 | synthetic immunogen rh5-34em bound to monoclonal antibody r5.034 | no | immune system | 2024-02-11 | 2024-07-17 | x-ray diffraction | 1.75 | 0.218 | 0.198 | 39223355 | 10.1038/s44321-024-00123-0 | 0 | auth_asym_id | scFv | N.A. | N.A. | A | N.A. | MGILPSPGMPALLSLVSLLSVLLMGCVAETGEVQLVESGGGLVQPGGSLRLSCAASGFTFNTYWMSWVRQAPGKGLEWVANIQQDGSEKDYLNSVRGRFTISRDNAKKSLYLQMNSLRAEDTAVYYCARDNPASAVAFDVWGQGAMVTVSSGGGGSGGGGSGGGGSQSALTQPPSVSEAPRRRVTIYCSGSSSNIGNNAVSWYQQLPGKSPKLLIYFDDLVTSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDRLNGVVFGGGTKLTVLGTKHHHHHH | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFNTYWMSWVRQAPGKGLEWVANIQQDGSEKDYLNSVRGRFTISRDNAKKSLYLQMNSLRAEDTAVYYCARDNPASAVAFDVWGQGAMVTVSSGGGGSGGGGSGGGGSQSALTQPPSVSEAPRRRVTIYCSGSSSNIGNNAVSWYQQLPGKSPKLLIYFDDLVTSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDRLNGVVFGGGTKLTVL | N.A. | 17.233416 | 0 | 285 | 0 | 228 | 0 | 245 | 0 | 0 | r5.034 scfv | N.A. | homo sapiens | N.A. | B | protein | rh5-34em | synthetic construct | 37 | 18 | 0.86 | H_only | train |
8rz1_C | 8rz1 | synthetic immunogen rh5-34em bound to monoclonal antibody r5.034 | no | immune system | 2024-02-11 | 2024-07-17 | x-ray diffraction | 1.75 | 0.218 | 0.198 | 39223355 | 10.1038/s44321-024-00123-0 | 0 | auth_asym_id | scFv | N.A. | N.A. | C | N.A. | MGILPSPGMPALLSLVSLLSVLLMGCVAETGEVQLVESGGGLVQPGGSLRLSCAASGFTFNTYWMSWVRQAPGKGLEWVANIQQDGSEKDYLNSVRGRFTISRDNAKKSLYLQMNSLRAEDTAVYYCARDNPASAVAFDVWGQGAMVTVSSGGGGSGGGGSGGGGSQSALTQPPSVSEAPRRRVTIYCSGSSSNIGNNAVSWYQQLPGKSPKLLIYFDDLVTSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDRLNGVVFGGGTKLTVLGTKHHHHHH | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFNTYWMSWVRQAPGKGLEWVANIQQDGSEKDYLNSVRGRFTISRDNAKKSLYLQMNSLRAEDTAVYYCARDNPASAVAFDVWGQGAMVTVSSGGGGSGGGGSGGGGSQSALTQPPSVSEAPRRRVTIYCSGSSSNIGNNAVSWYQQLPGKSPKLLIYFDDLVTSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDRLNGVVFGGGTKLTVL | N.A. | 17.280878 | 0 | 285 | 0 | 228 | 0 | 245 | 0 | 0 | r5.034 scfv | N.A. | homo sapiens | N.A. | D | protein | rh5-34em | synthetic construct | 33 | 16 | 0.84 | H_only | train |
8vzn_B_C | 8vzn | cryo-em structure of flvcr2 in the inward-facing state with choline bound | no | transport protein | 2024-02-12 | 2024-05-01 | electron microscopy | 2.77 | N.A. | N.A. | 38693257 | 10.1038/s41586-024-07326-y | 0 | auth_asym_id | VH:VL | IGHV3 | N.A. | B | C | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSSSYIHWVRQAPGKGLEWVASIYPYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARKQYNWPWPYIHSRYWGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYGSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | GGLVQPGGSLRLSCAASGFNVSSSYIHWVRQAPGKGLEWVASIYPYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARKQYNWPWPYIHSRYWGFDYWGQGTLVT | ITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYGSLVTFGQGTK | 15.186828 | 11.743316 | 239 | 215 | 117 | 62 | 117 | 83 | 55 | fab flv9 heavy chain | fab flv9 light chain | synthetic construct | synthetic construct | A | protein | feline leukemia virus subgroup c cellular receptor 2 | mus musculus | 34 | 13 | 0.76 | HL | train |
8vzo_B_D | 8vzo | cryo-em structure of flvcr2 in the outward-facing state with choline bound | no | transport protein | 2024-02-12 | 2024-05-01 | electron microscopy | 2.49 | N.A. | N.A. | 38693257 | 10.1038/s41586-024-07326-y | 0 | auth_asym_id | VH:VL- | IGHV3 | N.A. | B | D | EISEVQLVESGGGLVQPGGSLRLSCAASGFNLSSYSIHWVRQAPGKGLEWVASISSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSRYEFFYSNSWWYWPAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYVNPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EISEVQLVESGGGLVQPGGSLRLSCAASGFNLSSYSIHWVRQAPGKGLEWVASISSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSRYEFFYSNSWWYWPAMDYWGQGTLVT | SSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYVNPITFG | 15.177631 | 12.042477 | 240 | 215 | 129 | 70 | 129 | 70 | 45 | fab flv23 heavy chain | fab flv23 light chain | synthetic construct | synthetic construct | A | protein | feline leukemia virus subgroup c cellular receptor 2 | mus musculus | 49 | 18 | 0.82 | HL | train |
8w0v_H_L | 8w0v | crystal structure of broadly neutralizing antibody hcab55 in complex with hepatitis c virus envelope glycoprotein e2 ectodomain | no | immune system/viral protein | 2024-02-14 | 2024-03-27 | x-ray diffraction | 2.59 | 0.257 | 0.202 | 38518779 | 10.1016/j.immuni.2024.03.001 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | QVQLVQSGAEIKKPGASVKVSCKASGYTFISNYFHWVRQAPGQGLEWMGIINPSSGSTTYGQKFQGRVTLTSDTSASIVYLELSRLRSEDTAVYYCVSPRIAHCRGGRCYETLDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | EIVLTQSPVSLSLSPGERATLSCRASQSVSSNYLAWYQLKPGRAPRLLIYGASSRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGISSWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEIKKPGASVKVSCKASGYTFISNYFHWVRQAPGQGLEWMGIINPSSGSTTYGQKFQGRVTLTSDTSASIVYLELSRLRSEDTAVYYCVSPRIAHCRGGRCYETLDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | IVLTQSPVSLSLSPGERATLSCRASQSVSSNYLAWYQLKPGRAPRLLIYGASSRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGISSWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.549267 | 22.88069 | 237 | 215 | 224 | 213 | 227 | 213 | 96 | hcab55 fab heavy chain | hcab55 fab light chain | homo sapiens | homo sapiens | C | protein | envelope glycoprotein e2 | hepacivirus hominis | 47 | 19 | 0.9 | HL | train |
8w0x_H_L | 8w0x | crystal structure of broadly neutralizing antibody hcab40 in complex with hepatitis c virus envelope glycoprotein e2 ectodomain | no | immune system/viral protein | 2024-02-14 | 2024-03-27 | x-ray diffraction | 3.12 | 0.271 | 0.227 | 38518779 | 10.1016/j.immuni.2024.03.001 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | L | QVQLQQWGAGLLKPSESLSLTCVVYGGSFSGYYWSWIRQPPGKGLEWIGEINPTGSTNYNPSLNSRVTISVDRSKNHLSLKLSSVTAADTAVYFCARFLPPDYDLLTDYFDPPGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | DIHMTQSPFSLSASVGDRVTITCRASQSISGWLAWYQQKVGNAPKLLIYKASSLESGVPSRFSGSGSGTEFTLSISSLQPDDFATYYCQQYNSYPFTFGPGTKVDMKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQWGAGLLKPSESLSLTCVVYGGSFSGYYWSWIRQPPGKGLEWIGEINPTGSTNYNPSLNSRVTISVDRSKNHLSLKLSSVTAADTAVYFCARFLPPDYDLLTDYFDPPGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTK | DIHMTQSPFSLSASVGDRVTITCRASQSISGWLAWYQQKVGNAPKLLIYKASSLESGVPSRFSGSGSGTEFTLSISSLQPDDFATYYCQQYNSYPFTFGPGTKVDMKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.5782 | 22.197966 | 241 | 214 | 201 | 206 | 222 | 211 | 82 | hcab40 fab heavy chain | hcab40 fab light chain | homo sapiens | homo sapiens | C | protein | envelope glycoprotein e2 | hepacivirus hominis | 45 | 17 | 0.81 | HL | train |
8w0y_H_L | 8w0y | crystal structure of broadly neutralizing antibody hcab17 in complex with hepatitis c virus envelope glycoprotein e2 ectodomain | no | immune system/viral protein | 2024-02-14 | 2024-03-27 | x-ray diffraction | 3.31 | 0.253 | 0.209 | 38518779 | 10.1016/j.immuni.2024.03.001 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | L | QVQLNQWGAGLLKPSETLSLTCAVYGDAFSGNYWSWIRQPPGKGLQWIGEINHSGNTNYDPSLESRVSISLDTSKNQLSLKLNSVTAADTALYYCARGQRNCSGGNCYSGLWAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | AIHMTQSPFSLSASVGDRVTITCRASQGIRNDLAWYQHKPGTAPKVLIYAASSLQDGVSSRFSGSGSGTLFTLTISSLQPEDFATYYCLQGYNYPRTFGQGTKVEMKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLNQWGAGLLKPSETLSLTCAVYGDAFSGNYWSWIRQPPGKGLQWIGEINHSGNTNYDPSLESRVSISLDTSKNQLSLKLNSVTAADTALYYCARGQRNCSGGNCYSGLWAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | AIHMTQSPFSLSASVGDRVTITCRASQGIRNDLAWYQHKPGTAPKVLIYAASSLQDGVSSRFSGSGSGTLFTLTISSLQPEDFATYYCLQGYNYPRTFGQGTKVEMKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.829967 | 22.883234 | 236 | 214 | 225 | 213 | 225 | 213 | 111 | hcab17 fab heavy chain | hcab17 fab light chain | homo sapiens | homo sapiens | C | protein | envelope glycoprotein e2 | hepacivirus hominis | 56 | 18 | 0.62 | HL | train |
8w0y_A_B | 8w0y | crystal structure of broadly neutralizing antibody hcab17 in complex with hepatitis c virus envelope glycoprotein e2 ectodomain | no | immune system/viral protein | 2024-02-14 | 2024-03-27 | x-ray diffraction | 3.31 | 0.253 | 0.209 | 38518779 | 10.1016/j.immuni.2024.03.001 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | A | B | QVQLNQWGAGLLKPSETLSLTCAVYGDAFSGNYWSWIRQPPGKGLQWIGEINHSGNTNYDPSLESRVSISLDTSKNQLSLKLNSVTAADTALYYCARGQRNCSGGNCYSGLWAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | AIHMTQSPFSLSASVGDRVTITCRASQGIRNDLAWYQHKPGTAPKVLIYAASSLQDGVSSRFSGSGSGTLFTLTISSLQPEDFATYYCLQGYNYPRTFGQGTKVEMKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLNQWGAGLLKPSETLSLTCAVYGDAFSGNYWSWIRQPPGKGLQWIGEINHSGNTNYDPSLESRVSISLDTSKNQLSLKLNSVTAADTALYYCARGQRNCSGGNCYSGLWAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | AIHMTQSPFSLSASVGDRVTITCRASQGIRNDLAWYQHKPGTAPKVLIYAASSLQDGVSSRFSGSGSGTLFTLTISSLQPEDFATYYCLQGYNYPRTFGQGTKVEMKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.632961 | 23.033665 | 236 | 214 | 226 | 213 | 226 | 213 | 112 | hcab17 fab heavy chain | hcab17 fab light chain | homo sapiens | homo sapiens | D | protein | envelope glycoprotein e2 | hepacivirus hominis | 53 | 17 | 0.63 | HL | train |
8s0m_U | 8s0m | crystal structure of the hku1 receptor binding domain in complex with tmprss2 and the nanobody a01 | yes | viral protein/receptor | 2024-02-14 | 2024-06-26 | x-ray diffraction | 3.55 | 0.221 | 0.193 | 38964326 | 10.1016/j.cell.2024.06.007 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | U | N.A. | MAQVQLVESGGGLVQPGGSLRLSCVVSGFSLDYYAIGWFRQAPGKEREGVSCIGSSGDKTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAESALYSDCTEEQNPMLYDYWGQGTQVTVSSHHHHHH | N.A. | QVQLVESGGGLVQPGGSLRLSCVVSGFSLDYYAIGWFRQAPGKEREGVSCIGSSGDKTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAESALYSDCTEEQNPMLYDYWGQGTQVTVSSHHH | N.A. | 14.192637 | 0 | 136 | 0 | 131 | 0 | 131 | 0 | 0 | nanobody a01 | N.A. | vicugna pacos | N.A. | B | protein | transmembrane protease serine 2 | homo sapiens | 66 | 22 | 0.79 | H_only | train |
8s0m_V | 8s0m | crystal structure of the hku1 receptor binding domain in complex with tmprss2 and the nanobody a01 | yes | viral protein/receptor | 2024-02-14 | 2024-06-26 | x-ray diffraction | 3.55 | 0.221 | 0.193 | 38964326 | 10.1016/j.cell.2024.06.007 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | V | N.A. | MAQVQLVESGGGLVQPGGSLRLSCVVSGFSLDYYAIGWFRQAPGKEREGVSCIGSSGDKTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAESALYSDCTEEQNPMLYDYWGQGTQVTVSSHHHHHH | N.A. | QVQLVESGGGLVQPGGSLRLSCVVSGFSLDYYAIGWFRQAPGKEREGVSCIGSSGDKTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAESALYSDCTEEQNPMLYDYWGQGTQVTVSSH | N.A. | 13.814146 | 0 | 136 | 0 | 129 | 0 | 129 | 0 | 0 | nanobody a01 | N.A. | vicugna pacos | N.A. | E | protein | transmembrane protease serine 2 | homo sapiens | 67 | 22 | 0.79 | H_only | train |
8s0n_B | 8s0n | crystal structure of the tmprss2 zymogen in complex with the nanobody a07 | yes | protease/nanobody inhibitor | 2024-02-14 | 2024-06-26 | x-ray diffraction | 2.3 | 0.246 | 0.211 | 38964326 | 10.1016/j.cell.2024.06.007 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | MGSSHHHHHHSSGGGQVQLVESGGGLVQPGGSLRLSCTSSGSPLEHYDIIWFRQAPGREREGVSSITTSGGHTNYADSVKDRFTISRDNAKNVVYLQMNSLKPEDTAVYYCAGRVGGRRNWIVPLDGYDNAYWGQGTQVTVSSGGGSCSA | N.A. | GQVQLVESGGGLVQPGGSLRLSCTSSGSPLEHYDIIWFRQAPGREREGVSSITTSGGHTNYADSVKDRFTISRDNAKNVVYLQMNSLKPEDTAVYYCAGRVGGRRNWIVPLDGYDNAYWGQGTQVTVSSG | N.A. | 13.912197 | 0 | 150 | 0 | 130 | 0 | 130 | 0 | 0 | nanobody a07 | N.A. | vicugna pacos | N.A. | A | protein | transmembrane protease serine 2 | homo sapiens | 58 | 20 | 0.87 | H_only | train |
8s0n_D | 8s0n | crystal structure of the tmprss2 zymogen in complex with the nanobody a07 | yes | protease/nanobody inhibitor | 2024-02-14 | 2024-06-26 | x-ray diffraction | 2.3 | 0.246 | 0.211 | 38964326 | 10.1016/j.cell.2024.06.007 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | MGSSHHHHHHSSGGGQVQLVESGGGLVQPGGSLRLSCTSSGSPLEHYDIIWFRQAPGREREGVSSITTSGGHTNYADSVKDRFTISRDNAKNVVYLQMNSLKPEDTAVYYCAGRVGGRRNWIVPLDGYDNAYWGQGTQVTVSSGGGSCSA | N.A. | GQVQLVESGGGLVQPGGSLRLSCTSSGSPLEHYDIIWFRQAPGREREGVSSITTSGGHTNYADSVKDRFTISRDNAKNVVYLQMNSLKPEDTAVYYCAGRVGGRRNWIVPLDGYDNAYWGQGTQVTVSS | N.A. | 13.861387 | 0 | 150 | 0 | 129 | 0 | 129 | 0 | 0 | nanobody a07 | N.A. | vicugna pacos | N.A. | C | protein | transmembrane protease serine 2 | homo sapiens | 59 | 22 | 0.88 | H_only | train |
8ybl_B | 8ybl | crystal structure of nanobody seb-nb3 bound to staphylococcal enterotoxin b (seb) | no | antitoxin | 2024-02-15 | 2024-12-25 | x-ray diffraction | 2.33 | 0.262 | 0.223 | 39029852 | 10.1016/j.ijbiomac.2024.133957 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGSVQAGGSLRLSCAASGYTYSMYCMGWFRQAPGKEREGVAGICANGKAIHYVDSVKGRFTISQDNAKNTVYLQMNSLKPEDTAMYYCAADSRGGIWYEQQLSTLRYNYWGQGTQVTVSS | N.A. | QVQLVESGGGSVQAGGSLRLSCAASGYTYSMYCMGWFRQAPGKEREGVAGICANGKAIHYVDSVKGRFTISQDNAKNTVYLQMNSLKPEDTAMYYCAADSRGGIWYEQQLSTLRYNYWGQGTQVTVSS | N.A. | 13.862651 | 0 | 128 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody seb-nb3 | N.A. | vicugna pacos | N.A. | A | protein | enterotoxin type b | staphylococcus aureus | 36 | 18 | 1 | H_only | train |
8ybm_B | 8ybm | crystal structure of nanobody seb-nb6 bound to staphylococcal enterotoxin b (seb) | no | antitoxin | 2024-02-15 | 2024-12-25 | x-ray diffraction | 2.04 | 0.259 | 0.213 | 39029852 | 10.1016/j.ijbiomac.2024.133957 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGSVQAGGSLRLSCGPSGYSDDSRFSMGWFRQAPGKEREGVAVINSHGDTAYADSVKGRFTISKDNGRNTLILQMNSLKPEDTAIYVCASTRAYQLYSGSRSLRPVDYDYWGQGTQVTVSS | N.A. | VQLVESGGGSVQAGGSLRLSCGPSGYSDDSRFSMGWFRQAPGKEREGVAVINSHGDTAYADSVKGRFTISKDNGRNTLILQMNSLKPEDTAIYVCASTRAYQLYSGSRSLRPVDYDYWGQGTQVTVS | N.A. | 13.988367 | 0 | 129 | 0 | 127 | 0 | 127 | 0 | 0 | nanobody seb-nb6 | N.A. | vicugna pacos | N.A. | A | protein | enterotoxin type b | staphylococcus aureus | 43 | 16 | 0.84 | H_only | train |
8ybm_D | 8ybm | crystal structure of nanobody seb-nb6 bound to staphylococcal enterotoxin b (seb) | no | antitoxin | 2024-02-15 | 2024-12-25 | x-ray diffraction | 2.04 | 0.259 | 0.213 | 39029852 | 10.1016/j.ijbiomac.2024.133957 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGSVQAGGSLRLSCGPSGYSDDSRFSMGWFRQAPGKEREGVAVINSHGDTAYADSVKGRFTISKDNGRNTLILQMNSLKPEDTAIYVCASTRAYQLYSGSRSLRPVDYDYWGQGTQVTVSS | N.A. | VQLVESGGGSVQAGGSLRLSCGPSGYSDDSRFSMGWFRQAPGKEREGVAVINSHGDTAYADSVKGRFTISKDNGRNTLILQMNSLKPEDTAIYVCASTRAYQLYSGSRSLRPVDYDYWGQGTQVTVS | N.A. | 13.945965 | 0 | 129 | 0 | 127 | 0 | 127 | 0 | 0 | nanobody seb-nb6 | N.A. | vicugna pacos | N.A. | C | protein | enterotoxin type b | staphylococcus aureus | 42 | 17 | 0.94 | H_only | train |
8ybn_B | 8ybn | crystal structure of nanobody seb-nb8 bound to staphylococcal enterotoxin b (seb) | no | antitoxin | 2024-02-15 | 2024-12-25 | x-ray diffraction | 2.18 | 0.281 | 0.232 | 39029852 | 10.1016/j.ijbiomac.2024.133957 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGSVQDGGSLRLSCAASGFTIDNRWMTWFRQAPGKEREGVASILTYSGRTVYADSGKGRFTISQANAKNSVYLQMNSLKPEDTATYYCAAGDAYHKWFMPSSRALDRKEYNYWGQGTLVTVSS | N.A. | QVQLVESGGGSVQDGGSLRLSCAASGFTIDNRWMTWFRQAPGKEREGVASILTYSGRTVYADSGKGRFTISQANAKNSVYLQMNSLKPEDTATYYCAAGDAYHKWFMPSSRALDRKEYNYWGQGTLVTVSS | N.A. | 14.155736 | 0 | 131 | 0 | 131 | 0 | 131 | 0 | 0 | nanobody seb-nb8 | N.A. | vicugna pacos | N.A. | A | protein | enterotoxin type b | staphylococcus aureus | 32 | 12 | 0.92 | H_only | train |
8ybo_B | 8ybo | crystal structure of nanobody seb-nb11 bound to staphylococcal enterotoxin b (seb) | no | antitoxin | 2024-02-15 | 2024-12-25 | x-ray diffraction | 1.59 | 0.284 | 0.261 | 39029852 | 10.1016/j.ijbiomac.2024.133957 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGFALSLYVMSWVRQAPGEGREWVSSINSGGSTTAYADSVKGRFTISRDNAKNTLYLQLNSLKTEDTAMYYCAKSKYPKYVPTWPPLLDEHDYWGQGIQVTVSS | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGFALSLYVMSWVRQAPGEGREWVSSINSGGSTTAYADSVKGRFTISRDNAKNTLYLQLNSLKTEDTAMYYCAKSKYPKYVPTWPPLLDEHDYWGQGIQVTVSS | N.A. | 13.747661 | 0 | 128 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody seb-nb11 | N.A. | vicugna pacos | N.A. | A | protein | enterotoxin type b | staphylococcus aureus | 29 | 14 | 1 | H_only | train |
8ybo_D | 8ybo | crystal structure of nanobody seb-nb11 bound to staphylococcal enterotoxin b (seb) | no | antitoxin | 2024-02-15 | 2024-12-25 | x-ray diffraction | 1.59 | 0.284 | 0.261 | 39029852 | 10.1016/j.ijbiomac.2024.133957 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGFALSLYVMSWVRQAPGEGREWVSSINSGGSTTAYADSVKGRFTISRDNAKNTLYLQLNSLKTEDTAMYYCAKSKYPKYVPTWPPLLDEHDYWGQGIQVTVSS | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGFALSLYVMSWVRQAPGEGREWVSSINSGGSTTAYADSVKGRFTISRDNAKNTLYLQLNSLKTEDTAMYYCAKSKYPKYVPTWPPLLDEHDYWGQGIQVTVSS | N.A. | 13.769539 | 0 | 128 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody seb-nb11 | N.A. | vicugna pacos | N.A. | C | protein | enterotoxin type b | staphylococcus aureus | 29 | 13 | 1 | H_only | train |
8ybs_C_F | 8ybs | state - i: spike 2-up rbd with thsc20.hvtr04 (fab4) | no | protein binding | 2024-02-16 | 2025-02-19 | electron microscopy | 4.54 | N.A. | N.A. | 40330036 | 10.1039/d5ra00373c | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | C | F | QVQLVESGGGVVQPGRSLRLSCAASGFTFSNYAIHWVRQAPGKGLEWVAVVSYDGSNKYYAESVKGRFTISRDNSKNTLSLQMISLRPEDTAVYYCASVADTAMVPEWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | QSVLTQPRSVSGSPGQSVTISCTGTSSDVGAYNYVSWYQQHPGKAPKLMIYDVSARPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSNYAIHWVRQAPGKGLEWVAVVSYDGSNKYYAESVKGRFTISRDNSKNTLSLQMISLRPEDTAVYYCASVADTAMVPEWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | QSVLTQPRSVSGSPGQSVTISCTGTSSDVGAYNYVSWYQQHPGKAPKLMIYDVSARPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 24.964306 | 20.8046 | 227 | 214 | 224 | 211 | 224 | 211 | 87 | thsc20.hvtr4 (fab4) - heavy chain | thsc20.hvtr4 (fab4) - light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 32 | 15 | 0.79 | HL | train |
8ybs_A_E | 8ybs | state - i: spike 2-up rbd with thsc20.hvtr04 (fab4) | no | protein binding | 2024-02-16 | 2025-02-19 | electron microscopy | 4.54 | N.A. | N.A. | 40330036 | 10.1039/d5ra00373c | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | A | E | QVQLVESGGGVVQPGRSLRLSCAASGFTFSNYAIHWVRQAPGKGLEWVAVVSYDGSNKYYAESVKGRFTISRDNSKNTLSLQMISLRPEDTAVYYCASVADTAMVPEWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | QSVLTQPRSVSGSPGQSVTISCTGTSSDVGAYNYVSWYQQHPGKAPKLMIYDVSARPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSNYAIHWVRQAPGKGLEWVAVVSYDGSNKYYAESVKGRFTISRDNSKNTLSLQMISLRPEDTAVYYCASVADTAMVPEWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | QSVLTQPRSVSGSPGQSVTISCTGTSSDVGAYNYVSWYQQHPGKAPKLMIYDVSARPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 24.9643 | 20.804592 | 227 | 214 | 224 | 211 | 224 | 211 | 88 | thsc20.hvtr4 (fab4) - heavy chain | thsc20.hvtr4 (fab4) - light chain | homo sapiens | homo sapiens | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 34 | 16 | 0.94 | HL | train |
8yby_A_C | 8yby | state - i: spike 2-up rbd with thsc20.hvtr26 (fab26) - single fab masked | no | protein binding | 2024-02-16 | 2025-02-19 | electron microscopy | 4.4 | N.A. | N.A. | 40330036 | 10.1039/d5ra00373c | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | A | C | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSAIYSGDSTYYADSVKGRFTISRHNPKNTLYLQMNSLRAEDTAVYYCARLVGALTNIVVSGDGGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | SYELTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEVDYYCCSYAGSSTWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSAIYSGDSTYYADSVKGRFTISRHNPKNTLYLQMNSLRAEDTAVYYCARLVGALTNIVVSGDGGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SYELTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEVDYYCCSYAGSSTWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 21.618284 | 23.291388 | 231 | 216 | 230 | 215 | 230 | 215 | 116 | thsc20.hvtr26 (fab26) - heavy chain | thsc20.hvtr26 (fab26) - light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 31 | 18 | 0.9 | HL | train |
8ybz_D_G | 8ybz | state - ii: spike 3-up rbd with thsc20.hvtr26 (fab26) | no | protein binding | 2024-02-16 | 2025-02-19 | electron microscopy | 4.8 | N.A. | N.A. | 40330036 | 10.1039/d5ra00373c | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | D | G | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSAIYSGDSTYYADSVKGRFTISRHNPKNTLYLQMNSLRAEDTAVYYCARLVGALTNIVVSGDGGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | SYELTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEVDYYCCSYAGSSTWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSAIYSGDSTYYADSVKGRFTISRHNPKNTLYLQMNSLRAEDTAVYYCARLVGALTNIVVSGDGGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SYELTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEVDYYCCSYAGSSTWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 21.758902 | 23.600578 | 231 | 216 | 230 | 215 | 230 | 215 | 90 | thsc20.hvtr26 (fab26) - heavy chain | thsc20.hvtr26 (fab26) - light chain | homo sapiens | homo sapiens | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus;severe acute respiratory syndrome coronavirus | 13;14 | 9;6 | 1.0;1.0 | HL | train |
8ybz_E_H | 8ybz | state - ii: spike 3-up rbd with thsc20.hvtr26 (fab26) | no | protein binding | 2024-02-16 | 2025-02-19 | electron microscopy | 4.8 | N.A. | N.A. | 40330036 | 10.1039/d5ra00373c | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | E | H | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSAIYSGDSTYYADSVKGRFTISRHNPKNTLYLQMNSLRAEDTAVYYCARLVGALTNIVVSGDGGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | SYELTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEVDYYCCSYAGSSTWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSAIYSGDSTYYADSVKGRFTISRHNPKNTLYLQMNSLRAEDTAVYYCARLVGALTNIVVSGDGGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SYELTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEVDYYCCSYAGSSTWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 21.758896 | 23.600586 | 231 | 216 | 230 | 215 | 230 | 215 | 99 | thsc20.hvtr26 (fab26) - heavy chain | thsc20.hvtr26 (fab26) - light chain | homo sapiens | homo sapiens | B;C | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus;severe acute respiratory syndrome coronavirus | 45;14 | 15;6 | 0.58;0.86 | HL | train |
8ybz_F_I | 8ybz | state - ii: spike 3-up rbd with thsc20.hvtr26 (fab26) | no | protein binding | 2024-02-16 | 2025-02-19 | electron microscopy | 4.8 | N.A. | N.A. | 40330036 | 10.1039/d5ra00373c | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | F | I | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSAIYSGDSTYYADSVKGRFTISRHNPKNTLYLQMNSLRAEDTAVYYCARLVGALTNIVVSGDGGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | SYELTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEVDYYCCSYAGSSTWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSAIYSGDSTYYADSVKGRFTISRHNPKNTLYLQMNSLRAEDTAVYYCARLVGALTNIVVSGDGGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SYELTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEVDYYCCSYAGSSTWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 21.758902 | 23.600576 | 231 | 216 | 230 | 215 | 230 | 215 | 90 | thsc20.hvtr26 (fab26) - heavy chain | thsc20.hvtr26 (fab26) - light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 27 | 16 | 1 | HL | train |
8s2e_H_L | 8s2e | fab4251-ds-sosip complex | no | viral protein | 2024-02-17 | 2024-07-03 | electron microscopy | 3.8 | N.A. | N.A. | 38903123 | 10.21203/rs.3.rs-4023897/v1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | QVHVMQSGDQVKKPGASVQVSCTTSGSSFIEDSLHWIQQVPGQEPEWLGWVNPRHGAVNYSWKIRDRITMTRDISKSTMYVQMRGLQSDDTAMYYCAKSRRGANWALYWGWGTRITVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQLTQSPSYLAASVGDRVTITCRESNDLNWYLQRPGKPPKLLISGASKLERGVPSRFRGSSSGSLTISGLQPEDIGTYYCQVFEFFGGGTRVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHVMQSGDQVKKPGASVQVSCTTSGSSFIEDSLHWIQQVPGQEPEWLGWVNPRHGAVNYSWKIRDRITMTRDISKSTMYVQMRGLQSDDTAMYYCAKSRRGANWALYWGWGTRITVSS | DIQLTQSPSYLAASVGDRVTITCRESNDLNWYLQRPGKPPKLLISGASKLERGVPSRFRGSSSGSLTISGLQPEDIGTYYCQVFEFFGGGTRVDIK | 14.003301 | 12.841313 | 220 | 203 | 119 | 96 | 119 | 96 | 39 | variable heavy chain | variable light chain | homo sapiens | homo sapiens | C | protein | envelope glycoprotein gp120 | hiv whole-genome vector aa1305#18 | 49 | 11 | 0.52 | HL | train |
8s2t_N | 8s2t | cryo-em structure of cell-free synthesized human beta-1 adrenergic receptor cotranslationally inserted into a lipidic nanodiscs | no | membrane protein | 2024-02-19 | 2025-05-21 | electron microscopy | 3.3 | N.A. | N.A. | 40858117 | 10.1016/j.str.2025.07.020 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.413465 | 0 | 134 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody-35 | N.A. | lama glama | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short | homo sapiens;homo sapiens | 34;49 | 12;14 | 0.71;0.56 | H_only | train |
8w2e_D_C | 8w2e | sars-cov-2 m protein dimer in complex with jnj-9676 and fab-b | no | viral protein/immune system | 2024-02-20 | 2025-01-29 | electron microscopy | 3.06 | N.A. | N.A. | 40140563 | 10.1038/s41586-025-08651-6 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV7 | D | C | EVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGSGSHHHHHH | ASDIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 20.46632 | 23.956518 | 225 | 220 | 197 | 210 | 213 | 218 | 79 | fab b light chain | fab b heavy chain | homo sapiens | homo sapiens | A;B | protein;protein | membrane protein;membrane protein | sars-cov-2 pseudovirus;sars-cov-2 pseudovirus | 12;47 | 6;22 | 1.0;0.81 | HL | train |
8w2e_F_E | 8w2e | sars-cov-2 m protein dimer in complex with jnj-9676 and fab-b | no | viral protein/immune system | 2024-02-20 | 2025-01-29 | electron microscopy | 3.06 | N.A. | N.A. | 40140563 | 10.1038/s41586-025-08651-6 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV7 | F | E | EVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGSGSHHHHHH | ASDIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 21.295607 | 24.211617 | 225 | 220 | 208 | 218 | 213 | 218 | 80 | fab b light chain | fab b heavy chain | homo sapiens | homo sapiens | A;B | protein;protein | membrane protein;membrane protein | sars-cov-2 pseudovirus;sars-cov-2 pseudovirus | 44;11 | 22;6 | 0.81;1.0 | HL | train |
8s4h_A_B | 8s4h | crystal structure of scfv-1b6 in complex with rocuronium bromide | no | immune system | 2024-02-21 | 2024-09-18 | x-ray diffraction | 1.7 | 0.188 | 0.166 | 39259810 | 10.1126/scitranslmed.ado4463 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | A | B | QVHLQQSGAELLRPGTSVKMSCKASGYTFTNYWIGWTKQRPGHGLEWIGDIYPRSGYNNYNEKFKGKATLTADKSSSTAYMQFSSLTSEDSAIYYCARYYGSWSYYYAMDYWGQGTSVTVSSDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | DIILTQDELSNPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQLLIYLMSTRASGVSDRFSGSGSGTDFTLEISRVKAEDVGVYYCQQLVEYPYTFGGGTKLEIKGGGGSGGGGSGGGGSGGGGS | QVHLQQSGAELLRPGTSVKMSCKASGYTFTNYWIGWTKQRPGHGLEWIGDIYPRSGYNNYNEKFKGKATLTADKSSSTAYMQFSSLTSEDSAIYYCARYYGSWSYYYAMDYWGQGTSVTVSS | DIILTQDELSNPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQLLIYLMSTRASGVSDRFSGSGSGTDFTLEISRVKAEDVGVYYCQQLVEYPYTFGGGTKLEIK | 14.074876 | 13.647388 | 157 | 132 | 122 | 110 | 122 | 112 | 45 | scfv-1b6 vh | scfv-1b6 vl | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8s4h_C_D | 8s4h | crystal structure of scfv-1b6 in complex with rocuronium bromide | no | immune system | 2024-02-21 | 2024-09-18 | x-ray diffraction | 1.7 | 0.188 | 0.166 | 39259810 | 10.1126/scitranslmed.ado4463 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | C | D | QVHLQQSGAELLRPGTSVKMSCKASGYTFTNYWIGWTKQRPGHGLEWIGDIYPRSGYNNYNEKFKGKATLTADKSSSTAYMQFSSLTSEDSAIYYCARYYGSWSYYYAMDYWGQGTSVTVSSDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | DIILTQDELSNPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQLLIYLMSTRASGVSDRFSGSGSGTDFTLEISRVKAEDVGVYYCQQLVEYPYTFGGGTKLEIKGGGGSGGGGSGGGGSGGGGS | QVHLQQSGAELLRPGTSVKMSCKASGYTFTNYWIGWTKQRPGHGLEWIGDIYPRSGYNNYNEKFKGKATLTADKSSSTAYMQFSSLTSEDSAIYYCARYYGSWSYYYAMDYWGQGTSVTVSS | DIILTQDELSNPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQLLIYLMSTRASGVSDRFSGSGSGTDFTLEISRVKAEDVGVYYCQQLVEYPYTFGGGTKLEIK | 14.094463 | 13.66213 | 157 | 132 | 122 | 109 | 122 | 112 | 44 | scfv-1b6 vh | scfv-1b6 vl | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8s4h_H_L | 8s4h | crystal structure of scfv-1b6 in complex with rocuronium bromide | no | immune system | 2024-02-21 | 2024-09-18 | x-ray diffraction | 1.7 | 0.188 | 0.166 | 39259810 | 10.1126/scitranslmed.ado4463 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | H | L | QVHLQQSGAELLRPGTSVKMSCKASGYTFTNYWIGWTKQRPGHGLEWIGDIYPRSGYNNYNEKFKGKATLTADKSSSTAYMQFSSLTSEDSAIYYCARYYGSWSYYYAMDYWGQGTSVTVSSDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | DIILTQDELSNPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQLLIYLMSTRASGVSDRFSGSGSGTDFTLEISRVKAEDVGVYYCQQLVEYPYTFGGGTKLEIKGGGGSGGGGSGGGGSGGGGS | QVHLQQSGAELLRPGTSVKMSCKASGYTFTNYWIGWTKQRPGHGLEWIGDIYPRSGYNNYNEKFKGKATLTADKSSSTAYMQFSSLTSEDSAIYYCARYYGSWSYYYAMDYWGQGTSVTVS | DIILTQDELSNPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQLLIYLMSTRASGVSDRFSGSGSGTDFTLEISRVKAEDVGVYYCQQLVEYPYTFGGGTKLEIK | 13.975174 | 13.714096 | 157 | 132 | 121 | 110 | 121 | 112 | 42 | scfv-1b6 vh | scfv-1b6 vl | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8s4k_H_L | 8s4k | crystal structure of fab-2b1 in complex with rocuronium | no | immune system | 2024-02-21 | 2024-09-18 | x-ray diffraction | 1.6 | 0.206 | 0.178 | 39259810 | 10.1126/scitranslmed.ado4463 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | H | L | EVQLQQSGAELARPGASVKLSCKASGYTLTTYGINWVKQRTGQGLEWIGEIYPRSDYTYYNEKFKAKATLTADKSSSTAYMELRSLTSEDSAVYFCARGGVNSYTSHFDYWAQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVS | DIVITQDELSNPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQLLIYLMSTRASGVSDRFSGSGSGTDFTLEISRVKAEDVGVYYCQQLVEYPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | LQQSGAELARPGASVKLSCKASGYTLTTYGINWVKQRTGQGLEWIGEIYPRSDYTYYNEKFKAKATLTADKSSSTAYMELRSLTSEDSAVYFCARGGVNSYTSHFDYWAQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPR | DIVITQDELSNPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQLLIYLMSTRASGVSDRFSGSGSGTDFTLEISRVKAEDVGVYYCQQLVEYPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 20.743706 | 23.509884 | 236 | 219 | 207 | 216 | 218 | 216 | 96 | fab-2b1 vh | fab-2b1 vl | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8s4u_B | 8s4u | cryo-em structure of apo human slc19a3 in outward-open state | no | membrane protein | 2024-02-22 | 2024-10-02 | electron microscopy | 3.09 | N.A. | N.A. | 39358356 | 10.1038/s41467-024-52872-8 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQAGDSLRLSCAASGLTFSRYDMAWFRQAPGKEREFVAAITWTGSITDYADSVKGRFTISRDNAKNTIYLQMNSLKPEDTAVYYCAAAQVPYGSTLKFNLRTLFGSWGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLVESGGGLVQAGDSLRLSCAASGLTFSRYDMAWFRQAPGKEREFVAAITWTGSITDYADSVKGRFTISRDNAKNTIYLQMNSLKPEDTAVYYCAAAQVPYGSTLKFNLRTLFGSWGQGTQVTVSS | N.A. | 13.899529 | 0 | 138 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 3.4 | N.A. | lama glama | N.A. | A | protein | thiamine transporter 2 | homo sapiens | 48 | 18 | 1 | H_only | train |
8yeh_C_H | 8yeh | hpv16 l1 pentamer in complex with fab f5-196 | no | viral protein/immune system | 2024-02-22 | 2025-02-26 | electron microscopy | 2.86 | N.A. | N.A. | 40118915 | 10.1038/s41541-025-01106-z | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | C | H | QVQLVQSGAEVKKPGSSVKVSCKASGGTFNSYATGWVRQAPGQGLEWMGVIVPIFGTEDYPQRFQGRVTITADESTATAYMELRSLRSDDTAVYYCARSRLGSSSWFLFEYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASDMISNYLNWYQHKPGEAPKLLIYSASSLQTGVPSRFSGSGSGTDFTLTINNLQPEDFATYYCQQSYITRLSFGGGTKVEIK | QVQLVQSGAEVKKPGSSVKVSCKASGGTFNSYATGWVRQAPGQGLEWMGVIVPIFGTEDYPQRFQGRVTITADESTATAYMELRSLRSDDTAVYYCARSRLGSSSWFLFEYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASDMISNYLNWYQHKPGEAPKLLIYSASSLQTGVPSRFSGSGSGTDFTLTINNLQPEDFATYYCQQSYITRLSFGGGTKVEIK | 14.214568 | 13.433516 | 122 | 107 | 122 | 107 | 122 | 107 | 42 | heavy chain of f5-196 | light chain of f5-196 | homo sapiens | homo sapiens | F;L | protein;protein | major capsid protein l1;major capsid protein l1 | human papillomavirus type 16;human papillomavirus type 16 | 17;40 | 6;16 | 0.67;0.8 | HL | train |
8yeh_A_B | 8yeh | hpv16 l1 pentamer in complex with fab f5-196 | no | viral protein/immune system | 2024-02-22 | 2025-02-26 | electron microscopy | 2.86 | N.A. | N.A. | 40118915 | 10.1038/s41541-025-01106-z | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | A | B | QVQLVQSGAEVKKPGSSVKVSCKASGGTFNSYATGWVRQAPGQGLEWMGVIVPIFGTEDYPQRFQGRVTITADESTATAYMELRSLRSDDTAVYYCARSRLGSSSWFLFEYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASDMISNYLNWYQHKPGEAPKLLIYSASSLQTGVPSRFSGSGSGTDFTLTINNLQPEDFATYYCQQSYITRLSFGGGTKVEIK | QVQLVQSGAEVKKPGSSVKVSCKASGGTFNSYATGWVRQAPGQGLEWMGVIVPIFGTEDYPQRFQGRVTITADESTATAYMELRSLRSDDTAVYYCARSRLGSSSWFLFEYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASDMISNYLNWYQHKPGEAPKLLIYSASSLQTGVPSRFSGSGSGTDFTLTINNLQPEDFATYYCQQSYITRLSFGGGTKVEIK | 14.214542 | 13.433507 | 122 | 107 | 122 | 107 | 122 | 107 | 42 | heavy chain of f5-196 | light chain of f5-196 | homo sapiens | homo sapiens | F;O | protein;protein | major capsid protein l1;major capsid protein l1 | human papillomavirus type 16;human papillomavirus type 16 | 40;17 | 16;6 | 0.8;0.67 | HL | train |
8yeh_D_I | 8yeh | hpv16 l1 pentamer in complex with fab f5-196 | no | viral protein/immune system | 2024-02-22 | 2025-02-26 | electron microscopy | 2.86 | N.A. | N.A. | 40118915 | 10.1038/s41541-025-01106-z | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | D | I | QVQLVQSGAEVKKPGSSVKVSCKASGGTFNSYATGWVRQAPGQGLEWMGVIVPIFGTEDYPQRFQGRVTITADESTATAYMELRSLRSDDTAVYYCARSRLGSSSWFLFEYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASDMISNYLNWYQHKPGEAPKLLIYSASSLQTGVPSRFSGSGSGTDFTLTINNLQPEDFATYYCQQSYITRLSFGGGTKVEIK | QVQLVQSGAEVKKPGSSVKVSCKASGGTFNSYATGWVRQAPGQGLEWMGVIVPIFGTEDYPQRFQGRVTITADESTATAYMELRSLRSDDTAVYYCARSRLGSSSWFLFEYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASDMISNYLNWYQHKPGEAPKLLIYSASSLQTGVPSRFSGSGSGTDFTLTINNLQPEDFATYYCQQSYITRLSFGGGTKVEIK | 14.214585 | 13.433515 | 122 | 107 | 122 | 107 | 122 | 107 | 42 | heavy chain of f5-196 | light chain of f5-196 | homo sapiens | homo sapiens | L;M | protein;protein | major capsid protein l1;major capsid protein l1 | human papillomavirus type 16;human papillomavirus type 16 | 17;40 | 6;16 | 0.67;0.8 | HL | train |
8yeh_E_J | 8yeh | hpv16 l1 pentamer in complex with fab f5-196 | no | viral protein/immune system | 2024-02-22 | 2025-02-26 | electron microscopy | 2.86 | N.A. | N.A. | 40118915 | 10.1038/s41541-025-01106-z | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | E | J | QVQLVQSGAEVKKPGSSVKVSCKASGGTFNSYATGWVRQAPGQGLEWMGVIVPIFGTEDYPQRFQGRVTITADESTATAYMELRSLRSDDTAVYYCARSRLGSSSWFLFEYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASDMISNYLNWYQHKPGEAPKLLIYSASSLQTGVPSRFSGSGSGTDFTLTINNLQPEDFATYYCQQSYITRLSFGGGTKVEIK | QVQLVQSGAEVKKPGSSVKVSCKASGGTFNSYATGWVRQAPGQGLEWMGVIVPIFGTEDYPQRFQGRVTITADESTATAYMELRSLRSDDTAVYYCARSRLGSSSWFLFEYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASDMISNYLNWYQHKPGEAPKLLIYSASSLQTGVPSRFSGSGSGTDFTLTINNLQPEDFATYYCQQSYITRLSFGGGTKVEIK | 14.214573 | 13.433497 | 122 | 107 | 122 | 107 | 122 | 107 | 42 | heavy chain of f5-196 | light chain of f5-196 | homo sapiens | homo sapiens | M;N | protein;protein | major capsid protein l1;major capsid protein l1 | human papillomavirus type 16;human papillomavirus type 16 | 17;40 | 6;16 | 0.67;0.8 | HL | train |
8yeh_G_K | 8yeh | hpv16 l1 pentamer in complex with fab f5-196 | no | viral protein/immune system | 2024-02-22 | 2025-02-26 | electron microscopy | 2.86 | N.A. | N.A. | 40118915 | 10.1038/s41541-025-01106-z | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | G | K | QVQLVQSGAEVKKPGSSVKVSCKASGGTFNSYATGWVRQAPGQGLEWMGVIVPIFGTEDYPQRFQGRVTITADESTATAYMELRSLRSDDTAVYYCARSRLGSSSWFLFEYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASDMISNYLNWYQHKPGEAPKLLIYSASSLQTGVPSRFSGSGSGTDFTLTINNLQPEDFATYYCQQSYITRLSFGGGTKVEIK | QVQLVQSGAEVKKPGSSVKVSCKASGGTFNSYATGWVRQAPGQGLEWMGVIVPIFGTEDYPQRFQGRVTITADESTATAYMELRSLRSDDTAVYYCARSRLGSSSWFLFEYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASDMISNYLNWYQHKPGEAPKLLIYSASSLQTGVPSRFSGSGSGTDFTLTINNLQPEDFATYYCQQSYITRLSFGGGTKVEIK | 14.214557 | 13.433515 | 122 | 107 | 122 | 107 | 122 | 107 | 42 | heavy chain of f5-196 | light chain of f5-196 | homo sapiens | homo sapiens | N;O | protein;protein | major capsid protein l1;major capsid protein l1 | human papillomavirus type 16;human papillomavirus type 16 | 17;40 | 6;16 | 0.67;0.8 | HL | train |
9as0_E | 9as0 | global reconstruction of 5-ht2ar bound to 2-bromo-lsd in complex with a mini-gq protein and scfv16 obtained by cryo-electron microscopy (cryoem) | no | membrane protein | 2024-02-24 | 2025-04-02 | electron microscopy | 3.38 | N.A. | N.A. | 40108183 | 10.1038/s41467-025-57956-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKL | N.A. | 17.387114 | 0 | 267 | 0 | 226 | 0 | 244 | 0 | 0 | single chain fab (svfv16) | N.A. | homo sapiens | N.A. | B;C | protein;protein | g subunit q (gi2-mini-gq chimeric);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 37;22 | 22;8 | 0.88;0.73 | H_only | train |
9as2_E | 9as2 | global reconstruction of 5-ht2ar bound to dmt in complex with a mini-gq protein and scfv16 obtained by cryo-electron microscopy (cryoem) | no | membrane protein | 2024-02-24 | 2025-04-02 | electron microscopy | 3.21 | N.A. | N.A. | 40108183 | 10.1038/s41467-025-57956-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.097075 | 0 | 267 | 0 | 216 | 0 | 246 | 0 | 0 | single chain fab (svfv16) | N.A. | homo sapiens | N.A. | B;C | protein;protein | g subunit q (gi2-mini-gq chimeric);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 33;23 | 19;8 | 0.86;0.8 | H_only | train |
9as4_E | 9as4 | global reconstruction of 5-ht2ar bound to lsd in complex with a mini-gq protein and scfv16 obtained by cryo-electron microscopy (cryoem) | no | membrane protein | 2024-02-24 | 2025-04-02 | electron microscopy | 3.06 | N.A. | N.A. | 40108183 | 10.1038/s41467-025-57956-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.32397 | 0 | 267 | 0 | 228 | 0 | 246 | 0 | 0 | single chain fab (svfv16) | N.A. | homo sapiens | N.A. | B;C | protein;protein | g subunit q (gi2-mini-gq chimeric);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 34;24 | 19;10 | 0.86;0.77 | H_only | train |
9as6_E | 9as6 | global reconstruction of 5-ht2ar bound to mescaline in complex with a mini-gq protein and scfv16 obtained by cryo-electron microscopy (cryoem) | no | membrane protein | 2024-02-24 | 2025-04-02 | electron microscopy | 3.07 | N.A. | N.A. | 40108183 | 10.1038/s41467-025-57956-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.386883 | 0 | 267 | 0 | 228 | 0 | 246 | 0 | 0 | single chain fab (svfv16) | N.A. | homo sapiens | N.A. | B;C | protein;protein | g subunit q (gi2-mini-gq chimeric);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 31;24 | 16;10 | 0.84;0.77 | H_only | train |
9asa_E | 9asa | global reconstruction of 5-ht2ar bound to rs130-180 in complex with a mini-gq protein and scfv16 obtained by cryo-electron microscopy (cryoem) | no | membrane protein | 2024-02-24 | 2025-04-02 | electron microscopy | 3.12 | N.A. | N.A. | 40108183 | 10.1038/s41467-025-57956-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.36331 | 0 | 267 | 0 | 228 | 0 | 246 | 0 | 0 | single chain fab (svfv16) | N.A. | homo sapiens | N.A. | B;C | protein;protein | g subunit q (gi2-mini-gq chimeric);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 32;24 | 17;10 | 0.85;0.77 | H_only | train |
9asd_H_L | 9asd | vir-7229 fab fragment bound the sars-cov-2 ba.2.86 spike trimer (local refinement of the ba 2.86 rbd/vir-7229 vhvl) | no | viral protein/immune system | 2024-02-25 | 2024-10-16 | electron microscopy | 3.3 | N.A. | N.A. | 39383863 | 10.1016/j.cell.2024.09.026 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | H | L | EVQLVESGGSVVQPGRALRLSCAASGITFSSFGMYWVRQAPGKGLEWLGYIAYDGSDTYYADSVKGRFTISRDNSKNTLYLQMNSLRIEDTAVYYCAKDYYPLLSYYYGLDVWGQGTTVTVSS | QSVLTQPRSVSGSPGQSVTISCTGTSSDVGAYNYVSWYQQHPGKAPKFMIYDVDQRPSGVPDRFSGSKSGNTASLIISGLQAEDEADYYCSSYAGSYIWVFGGGTQLTVL | VQLVESGGSVVQPGRALRLSCAASGITFSSFGMYWVRQAPGKGLEWLGYIAYDGSDTYYADSVKGRFTISRDNSKNTLYLQMNSLRIEDTAVYYCAKDYYPLLSYYYGLDVWGQGTTVTV | SVLTQPRSVSGSPGQSVTISCTGTSSDVGAYNYVSWYQQHPGKAPKFMIYDVDQRPSGVPDRFSGSKSGNTASLIISGLQAEDEADYYCSSYAGSYIWVFGGGTQLTV | 13.838303 | 13.237976 | 123 | 110 | 120 | 108 | 120 | 108 | 43 | vir-7229 fab heavy chain | vir-7229 fab light chain | homo sapiens | homo sapiens | R | protein | spike glycoprotein | homo sapiens | 54 | 23 | 0.85 | HL | train |
8yfo_N | 8yfo | a cryo-em structure of ac-la-pth-pth1r-gs complex | no | membrane protein | 2024-02-25 | 2025-09-03 | electron microscopy | 2.71 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH | IGHV3 | N.A. | N | N.A. | MAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSH | N.A. | 14.072559 | 0 | 133 | 0 | 129 | 0 | 129 | 0 | 0 | nb35 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 43;29 | 13;11 | 0.57;0.73 | H_only | train |
9at8_L_K | 9at8 | fab 77-stabilized mev f ectodomain fragment | no | viral protein | 2024-02-26 | 2024-07-03 | electron microscopy | 3.6 | N.A. | N.A. | 38935733 | 10.1126/science.adm8693 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | L | K | MGWSCIILFLVATATGVHSDVQLQESGPGLVKPSQSLSLTCTVSGYSITSDYAWNWIRQFPGNKLEWMGYISYTLTTGYNPSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCARSGWLLPYWYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQGPTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK... | MGWSCIILFLVATATGVHSDVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNELLIYSGSTLQSGIPSRFRGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYTLTFGGGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | DVQLQESGPGLVKPSQSLSLTCTVSGYSITSDYAWNWIRQFPGNKLEWMGYISYTLTTGYNPSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCARSGWLLPYWYFDVWGAGTTVTVSS | DVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNELLIYSGSTLQSGIPSRFRGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYTLTFGGGTK | 13.984113 | 13.280447 | 479 | 233 | 121 | 103 | 121 | 103 | 43 | mab 77 heavy chain | mab 77 light chain | homo sapiens | homo sapiens | E;F | peptide;protein | fusion glycoprotein f0;fusion glycoprotein f0 | measles virus strain ichinose-b95a;measles virus strain ichinose-b95a | 21;37 | 8;16 | 0.89;0.73 | HL | train |
8s5u_B | 8s5u | cryo-em structure of thiamine-bound human slc19a3 in outward-open state | no | membrane protein | 2024-02-26 | 2024-10-02 | electron microscopy | 3.28 | N.A. | N.A. | 39358356 | 10.1038/s41467-024-52872-8 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQAGDSLRLSCAASGLTFSRYDMAWFRQAPGKEREFVAAITWTGSITDYADSVKGRFTISRDNAKNTIYLQMNSLKPEDTAVYYCAAAQVPYGSTLKFNLRTLFGSWGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLVESGGGLVQAGDSLRLSCAASGLTFSRYDMAWFRQAPGKEREFVAAITWTGSITDYADSVKGRFTISRDNAKNTIYLQMNSLKPEDTAVYYCAAAQVPYGSTLKFNLRTLFGSWGQGTQVTVSS | N.A. | 13.999333 | 0 | 138 | 0 | 128 | 0 | 128 | 0 | 0 | nb3.4 | N.A. | lama glama | N.A. | A | protein | thiamine transporter 2 | homo sapiens | 45 | 18 | 1 | H_only | train |
8s5w_B | 8s5w | cryo-em structure of fedratinib-bound human slc19a3 in inward-open state | yes | membrane protein | 2024-02-26 | 2024-10-02 | electron microscopy | 3.05 | N.A. | N.A. | 39358356 | 10.1038/s41467-024-52872-8 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQPGDSLRLSCAASGRTFSINAMAWFRQAPGKEREYVAQISWTGGNTYYAESVKGRFTISRDNAKNTVYLQMISLKPEDTAVYYCAADSGGIRLGASRWNYWGQGTQVTVSSGRASSSSHHHHHHEPEA | N.A. | VQLVESGGGLVQPGDSLRLSCAASGRTFSINAMAWFRQAPGKEREYVAQISWTGGNTYYAESVKGRFTISRDNAKNTVYLQMISLKPEDTAVYYCAADSGGIRLGASRWNYWGQGTQVTVSS | N.A. | 14.051847 | 0 | 140 | 0 | 122 | 0 | 122 | 0 | 0 | nb3.7 | N.A. | lama glama | N.A. | A | protein | thiamine transporter 2 | homo sapiens | 35 | 12 | 0.71 | H_only | train |
8s5z_B | 8s5z | cryo-em structure of hydroxychloroquine-bound human slc19a3 in inward-open state | no | membrane protein | 2024-02-26 | 2024-10-02 | electron microscopy | 3 | N.A. | N.A. | 39358356 | 10.1038/s41467-024-52872-8 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQAGDSLRLSCAASGRTFSNYYMAWFRQAPGKEREFVAAIRLSYGSTYYADSVRGRFTISKDNAKNTVNLRMNSLKSEDTAIYYCAAAEDRWALAVRTATTYNYWGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLVESGGGLVQAGDSLRLSCAASGRTFSNYYMAWFRQAPGKEREFVAAIRLSYGSTYYADSVRGRFTISKDNAKNTVNLRMNSLKSEDTAIYYCAAAEDRWALAVRTATTYNYWGQGTQVTVSSH | N.A. | 14.150036 | 0 | 136 | 0 | 127 | 0 | 127 | 0 | 0 | nb3.3 | N.A. | lama glama | N.A. | A | protein | thiamine transporter 2 | homo sapiens | 37 | 10 | 0.59 | H_only | train |
8s61_B | 8s61 | cryo-em structure of thiamine-bound human slc19a3 in inward-open state | yes | membrane protein | 2024-02-26 | 2024-10-02 | electron microscopy | 3.53 | N.A. | N.A. | 39358356 | 10.1038/s41467-024-52872-8 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | VQLVESGGGLVQPGDSLRLSCAASGRTFSINAMAWFRQAPGKEREYVAQISWTGGNTYYAESVKGRFTISRDNAKNTVYLQMISLKPEDTAVYYCAADSGGIRLGASRWNYWGQGTQVTVSS | N.A. | VQLVESGGGLVQPGDSLRLSCAASGRTFSINAMAWFRQAPGKEREYVAQISWTGGNTYYAESVKGRFTISRDNAKNTVYLQMISLKPEDTAVYYCAADSGGIRLGASRWNYWGQGTQVTVSS | N.A. | 14.011745 | 0 | 122 | 0 | 122 | 0 | 122 | 0 | 0 | nb3.7 | N.A. | lama glama | N.A. | A | protein | thiamine transporter 2 | homo sapiens | 37 | 13 | 0.76 | H_only | train |
9ast_E | 9ast | cryo-em structure of xcr1 signaling complex | yes | signaling protein | 2024-02-26 | 2024-12-11 | electron microscopy | 3.07 | N.A. | N.A. | 39565315 | 10.1073/pnas.2405732121 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELLEENLYFQGASHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.547722 | 0 | 266 | 0 | 232 | 0 | 247 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 33;22 | 19;9 | 0.9;0.82 | H_only | train |
8yg4_N | 8yg4 | a cryo-em structure of la-pth-r1-pth1r-gs complex structure | no | membrane protein | 2024-02-26 | 2025-09-03 | electron microscopy | 2.59 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH | IGHV3 | N.A. | N | N.A. | MAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSH | N.A. | 14.049083 | 0 | 140 | 0 | 129 | 0 | 129 | 0 | 0 | nb35 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 46;30 | 15;11 | 0.65;0.73 | H_only | train |
9ato_L | 9ato | xbb.1.5 spike/nanosota-3c complex | yes | viral protein/immune system | 2024-02-27 | 2024-09-18 | electron microscopy | 3.2 | N.A. | N.A. | 39325826 | 10.1371/journal.ppat.1012600 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | L | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.736609 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3c | N.A. | vicugna pacos | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 48 | 8 | 0.33 | H_only | train |
9ato_F | 9ato | xbb.1.5 spike/nanosota-3c complex | yes | viral protein/immune system | 2024-02-27 | 2024-09-18 | electron microscopy | 3.2 | N.A. | N.A. | 39325826 | 10.1371/journal.ppat.1012600 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.754145 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3c | N.A. | vicugna pacos | N.A. | B;C | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 38;13 | 7;7 | 0.37;1.0 | H_only | train |
9ato_D | 9ato | xbb.1.5 spike/nanosota-3c complex | yes | viral protein/immune system | 2024-02-27 | 2024-09-18 | electron microscopy | 3.2 | N.A. | N.A. | 39325826 | 10.1371/journal.ppat.1012600 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.667722 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3c | N.A. | vicugna pacos | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 30 | 8 | 0.53 | H_only | train |
9atp_D | 9atp | local refinement of xbb.1.5 spike/nanosota-3c complex | yes | viral protein/immune system | 2024-02-27 | 2024-09-18 | electron microscopy | 3.5 | N.A. | N.A. | 39325826 | 10.1371/journal.ppat.1012600 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.616847 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3c | N.A. | vicugna pacos | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 46 | 8 | 0.38 | H_only | train |
9atp_L | 9atp | local refinement of xbb.1.5 spike/nanosota-3c complex | yes | viral protein/immune system | 2024-02-27 | 2024-09-18 | electron microscopy | 3.5 | N.A. | N.A. | 39325826 | 10.1371/journal.ppat.1012600 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | L | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.797666 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3c | N.A. | vicugna pacos | N.A. | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 14;49 | 7;9 | 1.0;0.38 | H_only | train |
9atp_E | 9atp | local refinement of xbb.1.5 spike/nanosota-3c complex | yes | viral protein/immune system | 2024-02-27 | 2024-09-18 | electron microscopy | 3.5 | N.A. | N.A. | 39325826 | 10.1371/journal.ppat.1012600 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREGVAFISSIASTSYWLPVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.692741 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3c | N.A. | vicugna pacos | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 34 | 6 | 0.38 | H_only | train |
8yh2_S | 8yh2 | a3r-gi complex bound to adenosine | no | signaling protein | 2024-02-27 | 2024-11-06 | electron microscopy | 3.27 | N.A. | N.A. | 39511145 | 10.1038/s41467-024-53473-1 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAASSEDLYFQ | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.311544 | 0 | 260 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2,guanine nucleotide-binding protein g(i) subunit alpha-1 chimera | rattus rattus;homo sapiens | 20;32 | 9;18 | 0.82;0.9 | H_only | train |
8yh3_S | 8yh3 | a3r-gi complex bound to m6a | no | signaling protein | 2024-02-27 | 2024-11-06 | electron microscopy | 3.4 | N.A. | N.A. | 39511145 | 10.1038/s41467-024-53473-1 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAASSEDLYFQ | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.233124 | 0 | 260 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2,guanine nucleotide-binding protein g(i) subunit alpha-1 chimera | rattus rattus;homo sapiens | 21;34 | 7;20 | 0.7;0.91 | H_only | train |
8yh5_S | 8yh5 | a3r-gi complex bound to i6a | no | signaling protein | 2024-02-27 | 2024-11-06 | electron microscopy | 3.66 | N.A. | N.A. | 39511145 | 10.1038/s41467-024-53473-1 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAASSEDLYFQ | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.312462 | 0 | 260 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2,guanine nucleotide-binding protein g(i) subunit alpha-1 chimera | rattus rattus;homo sapiens | 18;32 | 7;18 | 0.78;0.9 | H_only | train |
8yh6_S | 8yh6 | a3r-gi complex bound to namodenoson | no | signaling protein | 2024-02-27 | 2024-11-06 | electron microscopy | 3.62 | N.A. | N.A. | 39511145 | 10.1038/s41467-024-53473-1 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAASSEDLYFQ | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.295145 | 0 | 260 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2,guanine nucleotide-binding protein g(i) subunit alpha-1 chimera | rattus rattus;homo sapiens | 20;28 | 8;17 | 0.73;0.94 | H_only | train |
8ygu_H_L | 8ygu | cryo-em structure of simian rotavirus sa11 vp4 in complex with nab 7h13-i54g mutant (right side) | no | virus | 2024-02-27 | 2025-02-12 | electron microscopy | 3.13 | N.A. | N.A. | 39833145 | 10.1038/s41467-025-56114-3 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQLKESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWNGGSTDYNSALKSRLSISKDNSQSQVFLKLNSLQTDDAAIYYCARNSGFDLFDFWGQGTTLTVS | DIVMTQSHKFMSTSVGDRVSITCKASQDVTSAVAWYQQKPGQSPKLLISSASYRYTGVPDRFSGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPPTFGAGTKLELK | VQLKESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWNGGSTDYNSALKSRLSISKDNSQSQVFLKLNSLQTDDAAIYYCARNSGFDLFDFWGQGTTLTV | DIVMTQSHKFMSTSVGDRVSITCKASQDVTSAVAWYQQKPGQSPKLLISSASYRYTGVPDRFSGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPPTFGAGTKLELK | 13.625833 | 13.531405 | 116 | 107 | 114 | 107 | 114 | 107 | 32 | antibody 7h13-i54g mutant heavy chain | antibody 7h13-i54g mutant light chain | mus musculus | mus musculus | B | protein | outer capsid protein vp4 | rotavirus a | 31 | 13 | 0.93 | HL | train |
8s6k_A | 8s6k | crystal structure of scfv-g2d11 complexed to a bis-tn glycopeptide | yes | immune system | 2024-02-27 | 2025-06-25 | x-ray diffraction | 1.75 | 0.221 | 0.182 | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | A | N.A. | QVQLQQSDAELVKPGASVKISCKASGYIFADHAIHWVKRKPEQGLEWIGYISPGNDDIKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCKRSLPGTFDYWGQGTTLTVSSSSGGGGSGGGGGSSGSSDVVMTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGGGTKLEMKRGGHHHHHH | N.A. | QVQLQQSDAELVKPGASVKISCKASGYIFADHAIHWVKRKPEQGLEWIGYISPGNDDIKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCKRSLPGTFDYWGQGTTLTVSSSSGGGGSGGGGGSSGSSDVVMTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGGGTKLEMK | N.A. | 17.432634 | 0 | 250 | 0 | 233 | 0 | 241 | 0 | 0 | scfv-g2d11 | N.A. | mus musculus | N.A. | M | peptide | mucin-1 subunit alpha | homo sapiens | 12 | 7 | 1 | H_only | train |
8s6k_H | 8s6k | crystal structure of scfv-g2d11 complexed to a bis-tn glycopeptide | yes | immune system | 2024-02-27 | 2025-06-25 | x-ray diffraction | 1.75 | 0.221 | 0.182 | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | QVQLQQSDAELVKPGASVKISCKASGYIFADHAIHWVKRKPEQGLEWIGYISPGNDDIKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCKRSLPGTFDYWGQGTTLTVSSSSGGGGSGGGGGSSGSSDVVMTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGGGTKLEMKRGGHHHHHH | N.A. | QVQLQQSDAELVKPGASVKISCKASGYIFADHAIHWVKRKPEQGLEWIGYISPGNDDIKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCKRSLPGTFDYWGQGTTLTVSSSSGGGGSGGGGGSSGSSDVVMTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGGGTKLEMK | N.A. | 17.397713 | 0 | 250 | 0 | 232 | 0 | 241 | 0 | 0 | scfv-g2d11 | N.A. | mus musculus | N.A. | M;N | peptide;peptide | mucin-1 subunit alpha;mucin-1 subunit alpha | homo sapiens;homo sapiens | 12;13 | 5;8 | 0.83;1.0 | H_only | train |
9au0_N | 9au0 | cryo-em structure of the bw245c-bound prostaglandin d2 receptor (dp1)-gs complex | yes | membrane protein | 2024-02-27 | 2025-08-27 | electron microscopy | 2.45 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.851441 | 0 | 139 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody-35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 50;30 | 14;11 | 0.56;0.73 | H_only | train |
9auc_N | 9auc | human amylin1 receptor in complex with gs and human calcitonin gene-related peptide | yes | membrane protein | 2024-02-28 | 2024-04-24 | electron microscopy | 2.4 | N.A. | N.A. | 38603770 | 10.1021/acs.biochem.4c00114 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.813971 | 0 | 138 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 43;32 | 14;11 | 0.64;0.69 | H_only | train |
9au2_F_J | 9au2 | vir-7229 fab fragment bound the ba.2.86 spike trimer (global refinement) | no | viral protein/immune system | 2024-02-28 | 2024-10-16 | electron microscopy | 3.1 | N.A. | N.A. | 39383863 | 10.1016/j.cell.2024.09.026 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | F | J | EVQLVESGGSVVQPGRALRLSCAASGITFSSFGMYWVRQAPGKGLEWLGYIAYDGSDTYYADSVKGRFTISRDNSKNTLYLQMNSLRIEDTAVYYCAKDYYPLLSYYYGLDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | QSVLTQPRSVSGSPGQSVTISCTGTSSDVGAYNYVSWYQQHPGKAPKFMIYDVDQRPSGVPDRFSGSKSGNTASLIISGLQAEDEADYYCSSYAGSYIWVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGGSVVQPGRALRLSCAASGITFSSFGMYWVRQAPGKGLEWLGYIAYDGSDTYYADSVKGRFTISRDNSKNTLYLQMNSLRIEDTAVYYCAKDYYPLLSYYYGLDVWGQGTTVTV | SVLTQPRSVSGSPGQSVTISCTGTSSDVGAYNYVSWYQQHPGKAPKFMIYDVDQRPSGVPDRFSGSKSGNTASLIISGLQAEDEADYYCSSYAGSYIWVFGGGTQLTV | 13.679798 | 13.136714 | 226 | 216 | 120 | 108 | 120 | 108 | 45 | vir-7229 fab heavy chain | vir-7229 fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 10;48 | 5;20 | 0.83;0.83 | HL | train |
9au2_D_I | 9au2 | vir-7229 fab fragment bound the ba.2.86 spike trimer (global refinement) | no | viral protein/immune system | 2024-02-28 | 2024-10-16 | electron microscopy | 3.1 | N.A. | N.A. | 39383863 | 10.1016/j.cell.2024.09.026 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | D | I | EVQLVESGGSVVQPGRALRLSCAASGITFSSFGMYWVRQAPGKGLEWLGYIAYDGSDTYYADSVKGRFTISRDNSKNTLYLQMNSLRIEDTAVYYCAKDYYPLLSYYYGLDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | QSVLTQPRSVSGSPGQSVTISCTGTSSDVGAYNYVSWYQQHPGKAPKFMIYDVDQRPSGVPDRFSGSKSGNTASLIISGLQAEDEADYYCSSYAGSYIWVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGGSVVQPGRALRLSCAASGITFSSFGMYWVRQAPGKGLEWLGYIAYDGSDTYYADSVKGRFTISRDNSKNTLYLQMNSLRIEDTAVYYCAKDYYPLLSYYYGLDVWGQGTTVTV | SVLTQPRSVSGSPGQSVTISCTGTSSDVGAYNYVSWYQQHPGKAPKFMIYDVDQRPSGVPDRFSGSKSGNTASLIISGLQAEDEADYYCSSYAGSYIWVFGGGTQLTV | 13.751537 | 13.19815 | 226 | 216 | 120 | 108 | 120 | 108 | 47 | vir-7229 fab heavy chain | vir-7229 fab light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 41 | 18 | 0.95 | HL | train |
8yhz_H_L | 8yhz | the co-crystal structure of the fab fragment of ab-1080 with nav1.7 vsdii peptide | no | membrane protein/immune system | 2024-02-28 | 2024-10-23 | x-ray diffraction | 1.62 | 0.21 | 0.194 | 39461335 | 10.1016/j.xcrm.2024.101800 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | QSEEESGGRLVTPETPLTLTCTASGIDLSKWPMTWVRQAPGKGLEWIGIIGRSGSTNYASWAKGRFTISKTSTTVDLKMTSPTTEDTATYFCARGGSYYDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | QVLTQTASPVSAAVGNTVTITCQSSQSVWKNNDLSWYQQKLGQPPKLLIYYASTLASGVSSRFKASGSGTQFTLTISDVQCDDAGTYYCVGSYDCSSADCNAFGGGTKVVVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | QSEEESGGRLVTPETPLTLTCTASGIDLSKWPMTWVRQAPGKGLEWIGIIGRSGSTNYASWAKGRFTISKTSTTVDLKMTSPTTEDTATYFCARGGSYYDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | QVLTQTASPVSAAVGNTVTITCQSSQSVWKNNDLSWYQQKLGQPPKLLIYYASTLASGVSSRFKASGSGTQFTLTISDVQCDDAGTYYCVGSYDCSSADCNAFGGGTKVVVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.871923 | 23.43448 | 214 | 218 | 214 | 218 | 214 | 218 | 106 | heavy chain of 1080 fab | light chain of 1080 fab | oryctolagus cuniculus | oryctolagus cuniculus | P | peptide | sodium channel protein type 9 subunit alpha | homo sapiens | 30 | 19 | 0.86 | HL | train |
8s6t_A_B | 8s6t | crystal structure of fab-3f1 complexed to a bis-stn glycopeptide | no | immune system | 2024-02-28 | 2025-06-25 | x-ray diffraction | 1.85 | 0.267 | 0.23 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | A | B | QVQLKQSDAELVKPGASVKISCKASGYTFTDHAIHWVKQKPEQGLDWIGYISPGNGDIKYNEKFKDKVTLTADKSSSTASMHLNSLTSEDSAVYFCKRSLLALDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DILMTQSHKFMSTSVGDRVSITCKASQDVGTNIAWYQQKPGRSPKVLIYSASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLTDYFCQQYSSFPLTFGVGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | QVQLKQSDAELVKPGASVKISCKASGYTFTDHAIHWVKQKPEQGLDWIGYISPGNGDIKYNEKFKDKVTLTADKSSSTASMHLNSLTSEDSAVYFCKRSLLALDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DILMTQSHKFMSTSVGDRVSITCKASQDVGTNIAWYQQKPGRSPKVLIYSASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLTDYFCQQYSSFPLTFGVGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 23.119785 | 22.778728 | 215 | 211 | 215 | 211 | 215 | 211 | 89 | 3f1 (vh-vh1) | 3f1 (vl-cl) | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8s6v_A_B | 8s6v | crystal structure of fab-2d9 chimera complexed to a bis-tn glycopeptide | yes | immune system | 2024-02-28 | 2025-06-25 | x-ray diffraction | 1.95 | 0.244 | 0.199 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV4 | A | B | QVQLQQSDAELVKPGASVKISCKASGYIFADHAIHWVKRKPEQGLEWIGYISPGNDDIKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCKRSLPGTFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSDQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQCYSYPFTFGSGTKLERKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | QVQLQQSDAELVKPGASVKISCKASGYIFADHAIHWVKRKPEQGLEWIGYISPGNDDIKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCKRSLPGTFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSDQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQCYSYPFTFGSGTKLERKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 22.61074 | 23.701307 | 216 | 217 | 211 | 217 | 216 | 217 | 85 | g2d11 (vh-ch1) | 2d9 (vl-cl) | mus musculus | mus musculus | M | peptide | mucin-1 subunit alpha | homo sapiens | 15 | 8 | 0.89 | HL | train |
8s6v_C_D | 8s6v | crystal structure of fab-2d9 chimera complexed to a bis-tn glycopeptide | yes | immune system | 2024-02-28 | 2025-06-25 | x-ray diffraction | 1.95 | 0.244 | 0.199 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV4 | C | D | QVQLQQSDAELVKPGASVKISCKASGYIFADHAIHWVKRKPEQGLEWIGYISPGNDDIKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCKRSLPGTFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSDQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQCYSYPFTFGSGTKLERKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | QVQLQQSDAELVKPGASVKISCKASGYIFADHAIHWVKRKPEQGLEWIGYISPGNDDIKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCKRSLPGTFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSDQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQCYSYPFTFGSGTKLERKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 22.593155 | 23.78065 | 216 | 217 | 211 | 217 | 216 | 217 | 88 | g2d11 (vh-ch1) | 2d9 (vl-cl) | mus musculus | mus musculus | N | peptide | mucin-1 subunit alpha | homo sapiens | 18 | 10 | 0.91 | HL | train |
9aus_A_B | 9aus | crystal structure of loop-closed dumbbell rna bridged by glycine | no | rna | 2024-02-29 | 2024-09-04 | x-ray diffraction | 2.07 | 0.254 | 0.221 | 39178230 | 10.1073/pnas.2410206121 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.496113 | 23.10926 | 225 | 215 | 225 | 215 | 225 | 215 | 107 | fab bl3-6 heavy chain | fab bl3-6 light chain | mus musculus | mus musculus | C | RNA | loop-closed dumbbell rna bridged by glycine | unidentified | 31 | 22 | 0.92 | HL | train |
9aus_H_L | 9aus | crystal structure of loop-closed dumbbell rna bridged by glycine | no | rna | 2024-02-29 | 2024-09-04 | x-ray diffraction | 2.07 | 0.254 | 0.221 | 39178230 | 10.1073/pnas.2410206121 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.378014 | 23.31964 | 225 | 215 | 225 | 215 | 225 | 215 | 110 | fab bl3-6 heavy chain | fab bl3-6 light chain | mus musculus | mus musculus | R | RNA | loop-closed dumbbell rna bridged by glycine | unidentified | 32 | 22 | 0.92 | HL | train |
8s79_D | 8s79 | lotus japonicus nfr5 intracellular domain in complex with nanobody 200 | no | plant protein | 2024-02-29 | 2024-11-06 | x-ray diffraction | 2.29 | 0.231 | 0.196 | 39495923 | 10.1073/pnas.2405671121 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGSVQAGDSLRLSCTGPGRTDGPYVMGWFRQAPEKEREFVAAISRYGSGTYYADSVRGRFTISRDNVKNTVYLQMNSLKPEDTAIYYCNRVPPVLSWGQGTQVTVSSLEHHHHHH | N.A. | LVESGGGSVQAGDSLRLSCTGPGRTDGPYVMGWFRQAPEKEREFVAAISRYGSGTYYADSVRGRFTISRDNVKNTVYLQMNSLKPEDTAIYYCNRVPPVLSWGQGTQVTVSS | N.A. | 13.23772 | 0 | 123 | 0 | 110 | 0 | 112 | 0 | 0 | nanobody 200 | N.A. | lama glama | N.A. | A | protein | nod-factor receptor 5 | lotus japonicus | 34 | 8 | 0.44 | H_only | train |
8s79_C | 8s79 | lotus japonicus nfr5 intracellular domain in complex with nanobody 200 | no | plant protein | 2024-02-29 | 2024-11-06 | x-ray diffraction | 2.29 | 0.231 | 0.196 | 39495923 | 10.1073/pnas.2405671121 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLVESGGGSVQAGDSLRLSCTGPGRTDGPYVMGWFRQAPEKEREFVAAISRYGSGTYYADSVRGRFTISRDNVKNTVYLQMNSLKPEDTAIYYCNRVPPVLSWGQGTQVTVSSLEHHHHHH | N.A. | VQLVESGGGSVQAGDSLRLSCTGPGRTDGPYVMGWFRQAPEKEREFVAAISRYGSGTYYADSVRGRFTISRDNVKNTVYLQMNSLKPEDTAIYYCNRVPPVLSWGQGTQVTVSS | N.A. | 13.438545 | 0 | 123 | 0 | 114 | 0 | 114 | 0 | 0 | nanobody 200 | N.A. | lama glama | N.A. | B | protein | nod-factor receptor 5 | lotus japonicus | 39 | 8 | 0.4 | H_only | train |
9aug_G_J | 9aug | cryo-em structure of ch848.d949.10.17.gs-dh270.uca3.g57r | no | viral protein/immune system | 2024-02-29 | 2025-02-05 | electron microscopy | 3.8 | N.A. | N.A. | 39772772 | 10.1126/scitranslmed.adr2218 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | G | J | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGRTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGRTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVS | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVL | 14.53774 | 13.624715 | 232 | 216 | 126 | 110 | 126 | 110 | 46 | uca3.g57r heavy chain | uca3.g57r light chain | homo sapiens | homo sapiens | A | protein | hiv-1 bg505 ds-sosip glycoprotein gp120 | human immunodeficiency virus 1 | 34 | 16 | 0.89 | HL | train |
9aug_H_K | 9aug | cryo-em structure of ch848.d949.10.17.gs-dh270.uca3.g57r | no | viral protein/immune system | 2024-02-29 | 2025-02-05 | electron microscopy | 3.8 | N.A. | N.A. | 39772772 | 10.1126/scitranslmed.adr2218 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | H | K | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGRTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGRTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVS | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVL | 14.511903 | 13.523424 | 232 | 216 | 126 | 110 | 126 | 110 | 45 | uca3.g57r heavy chain | uca3.g57r light chain | homo sapiens | homo sapiens | B | protein | hiv-1 bg505 ds-sosip glycoprotein gp120 | human immunodeficiency virus 1 | 36 | 16 | 0.89 | HL | train |
9aug_I_L | 9aug | cryo-em structure of ch848.d949.10.17.gs-dh270.uca3.g57r | no | viral protein/immune system | 2024-02-29 | 2025-02-05 | electron microscopy | 3.8 | N.A. | N.A. | 39772772 | 10.1126/scitranslmed.adr2218 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | I | L | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGRTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGRTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVS | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVL | 14.540776 | 13.606534 | 232 | 216 | 126 | 110 | 126 | 110 | 48 | uca3.g57r heavy chain | uca3.g57r light chain | homo sapiens | homo sapiens | C | protein | hiv-1 bg505 ds-sosip glycoprotein gp120 | human immunodeficiency virus 1 | 34 | 15 | 0.88 | HL | train |
9auh_G_J | 9auh | cryo-em structure of ch848.d949.10.17.gs-dh270.uca3 | no | viral protein/immune system | 2024-02-29 | 2025-02-05 | electron microscopy | 3.6 | N.A. | N.A. | 39772772 | 10.1126/scitranslmed.adr2218 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | G | J | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVS | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVL | 14.460401 | 13.556932 | 232 | 216 | 126 | 110 | 126 | 110 | 45 | uca3 heavy chain | uca3 light chain | homo sapiens | homo sapiens | A | protein | hiv-1 bg505 ds-sosip glycoprotein gp120 | human immunodeficiency virus 1 | 30 | 16 | 0.94 | HL | train |
9auh_H_L | 9auh | cryo-em structure of ch848.d949.10.17.gs-dh270.uca3 | no | viral protein/immune system | 2024-02-29 | 2025-02-05 | electron microscopy | 3.6 | N.A. | N.A. | 39772772 | 10.1126/scitranslmed.adr2218 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | H | L | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVS | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVL | 14.453663 | 13.56394 | 232 | 216 | 126 | 110 | 126 | 110 | 45 | uca3 heavy chain | uca3 light chain | homo sapiens | homo sapiens | B | protein | hiv-1 bg505 ds-sosip glycoprotein gp120 | human immunodeficiency virus 1 | 28 | 15 | 0.94 | HL | train |
9auh_I_K | 9auh | cryo-em structure of ch848.d949.10.17.gs-dh270.uca3 | no | viral protein/immune system | 2024-02-29 | 2025-02-05 | electron microscopy | 3.6 | N.A. | N.A. | 39772772 | 10.1126/scitranslmed.adr2218 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | I | K | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGGWISLYYDSSGYPNFDYWGQGTLVTVS | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTVIFGGGTKLTVL | 14.463896 | 13.574055 | 232 | 216 | 126 | 110 | 126 | 110 | 44 | uca3 heavy chain | uca3 light chain | homo sapiens | homo sapiens | C | protein | hiv-1 bg505 ds-sosip glycoprotein gp120 | human immunodeficiency virus 1 | 30 | 16 | 0.89 | HL | train |
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