PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8yz5_I_J | 8yz5 | sars-cov-2 delta spike in complex with fab of je-5c | yes | viral protein/immune system | 2024-04-06 | 2024-06-05 | electron microscopy | 3.93 | N.A. | N.A. | 38857264 | 10.1371/journal.ppat.1012246 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | I | J | EVQLLESGGGLVQPGGSLRLSCAASGVTVTSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARDLREAGGMDVWGQGTTVTVSSA | DIVMTQSPSSLSASVGDRVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQFDNLPWTFGQGTKVEIR | EVQLLESGGGLVQPGGSLRLSCAASGVTVTSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARDLREAGGMDVWGQGTTVTVSS | DIVMTQSPSSLSASVGDRVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQFDNLPWTFGQGTKVEIR | 13.979277 | 13.566107 | 119 | 107 | 118 | 107 | 118 | 107 | 36 | fab heavy chain of je-5c | fab light chain of je-5c | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 61 | 20 | 0.69 | HL | train |
8yz5_G_K | 8yz5 | sars-cov-2 delta spike in complex with fab of je-5c | yes | viral protein/immune system | 2024-04-06 | 2024-06-05 | electron microscopy | 3.93 | N.A. | N.A. | 38857264 | 10.1371/journal.ppat.1012246 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | G | K | EVQLLESGGGLVQPGGSLRLSCAASGVTVTSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARDLREAGGMDVWGQGTTVTVSSA | DIVMTQSPSSLSASVGDRVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQFDNLPWTFGQGTKVEIR | EVQLLESGGGLVQPGGSLRLSCAASGVTVTSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARDLREAGGMDVWGQGTTVTVSSA | DIVMTQSPSSLSASVGDRVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQFDNLPWTFGQGTKVEI | 13.837644 | 13.278133 | 119 | 107 | 119 | 106 | 119 | 106 | 37 | fab heavy chain of je-5c | fab light chain of je-5c | homo sapiens | homo sapiens | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 70 | 24 | 0.71 | HL | train |
8yz6_D_E | 8yz6 | sars-cov-2 spike (ba.1) in complex with fab of jh-8b | yes | viral protein/immune system | 2024-04-06 | 2024-06-05 | electron microscopy | 4.55 | N.A. | N.A. | 38857264 | 10.1371/journal.ppat.1012246 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | D | E | EVQLVESGGGLIQPGGSLRLSCAASGVTVSSNYMSWVRQAPGKGLEWISLIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARELDIVGATDIWGQGTMVTVSSA | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAIYYCQQYGVSPPEFTFGPGTKVEIK | EVQLVESGGGLIQPGGSLRLSCAASGVTVSSNYMSWVRQAPGKGLEWISLIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARELDIVGATDIWGQGTMVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAIYYCQQYGVSPPEFTFGPGTKVEIK | 13.527829 | 13.45164 | 119 | 110 | 118 | 110 | 118 | 110 | 43 | fab heavy chain of jh-8b | fab light chain of jh-8b | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 41 | 14 | 0.78 | HL | train |
9bbn_Q_R | 9bbn | cryo-em structure of chikungunya virus asymmetric unit with fab c9 | no | viral protein/immune system | 2024-04-06 | 2025-10-08 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | Q | R | EVQLVQSGAEVKKPGSSVKVSCKAFGGTFSSYAITWVRQAPGQGLEWMGGIIPILGTTDYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDPPTHGGDFNYYYYGVAVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | EIVLTQSPGTLSLSPGERATLSCRASQSNNYLAWYQQKPGQAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLAPEDFAVYYCQQYGSSPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | EVQLVQSGAEVKKPGSSVKVSCKAFGGTFSSYAITWVRQAPGQGLEWMGGIIPILGTTDYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDPPTHGGDFNYYYYGVAVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | EIVLTQSPGTLSLSPGERATLSCRASQSNNYLAWYQQKPGQAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLAPEDFAVYYCQQYGSSPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.173613 | 23.17023 | 234 | 212 | 234 | 212 | 234 | 212 | 115 | heavy chain of c9 | light chain of c9 | mus musculus | mus musculus | E;F;B;X | protein;protein;protein;protein | e2 glycoprotein;e2 glycoprotein;e1 glycoprotein;e3 glycoprotein | chikungunya virus;chikungunya virus;chikungunya virus;chikungunya virus | 46;71;16;16 | 19;13;5;6 | 0.79;0.34;0.71;0.55 | HL | train |
9bbn_M_N | 9bbn | cryo-em structure of chikungunya virus asymmetric unit with fab c9 | no | viral protein/immune system | 2024-04-06 | 2025-10-08 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | M | N | EVQLVQSGAEVKKPGSSVKVSCKAFGGTFSSYAITWVRQAPGQGLEWMGGIIPILGTTDYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDPPTHGGDFNYYYYGVAVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | EIVLTQSPGTLSLSPGERATLSCRASQSNNYLAWYQQKPGQAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLAPEDFAVYYCQQYGSSPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | EVQLVQSGAEVKKPGSSVKVSCKAFGGTFSSYAITWVRQAPGQGLEWMGGIIPILGTTDYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDPPTHGGDFNYYYYGVAVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | EIVLTQSPGTLSLSPGERATLSCRASQSNNYLAWYQQKPGQAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLAPEDFAVYYCQQYGSSPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.240677 | 22.878733 | 234 | 212 | 234 | 212 | 234 | 212 | 125 | heavy chain of c9 | light chain of c9 | mus musculus | mus musculus | E;G;V | protein;protein;protein | e2 glycoprotein;e2 glycoprotein;e3 glycoprotein | chikungunya virus;chikungunya virus;chikungunya virus | 83;46;17 | 16;20;7 | 0.36;0.83;0.64 | HL | train |
9bbn_O_P | 9bbn | cryo-em structure of chikungunya virus asymmetric unit with fab c9 | no | viral protein/immune system | 2024-04-06 | 2025-10-08 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | O | P | EVQLVQSGAEVKKPGSSVKVSCKAFGGTFSSYAITWVRQAPGQGLEWMGGIIPILGTTDYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDPPTHGGDFNYYYYGVAVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | EIVLTQSPGTLSLSPGERATLSCRASQSNNYLAWYQQKPGQAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLAPEDFAVYYCQQYGSSPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | EVQLVQSGAEVKKPGSSVKVSCKAFGGTFSSYAITWVRQAPGQGLEWMGGIIPILGTTDYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDPPTHGGDFNYYYYGVAVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | EIVLTQSPGTLSLSPGERATLSCRASQSNNYLAWYQQKPGQAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLAPEDFAVYYCQQYGSSPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.16221 | 22.915703 | 234 | 212 | 234 | 212 | 234 | 212 | 110 | heavy chain of c9 | light chain of c9 | mus musculus | mus musculus | F;G;C;W | protein;protein;protein;protein | e2 glycoprotein;e2 glycoprotein;e1 glycoprotein;e3 glycoprotein | chikungunya virus;chikungunya virus;chikungunya virus;chikungunya virus | 43;78;15;17 | 19;17;5;6 | 0.9;0.39;0.62;0.67 | HL | train |
9bbn_S_T | 9bbn | cryo-em structure of chikungunya virus asymmetric unit with fab c9 | no | viral protein/immune system | 2024-04-06 | 2025-10-08 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | S | T | EVQLVQSGAEVKKPGSSVKVSCKAFGGTFSSYAITWVRQAPGQGLEWMGGIIPILGTTDYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDPPTHGGDFNYYYYGVAVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | EIVLTQSPGTLSLSPGERATLSCRASQSNNYLAWYQQKPGQAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLAPEDFAVYYCQQYGSSPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | EVQLVQSGAEVKKPGSSVKVSCKAFGGTFSSYAITWVRQAPGQGLEWMGGIIPILGTTDYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDPPTHGGDFNYYYYGVAVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | EIVLTQSPGTLSLSPGERATLSCRASQSNNYLAWYQQKPGQAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLAPEDFAVYYCQQYGSSPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.162014 | 23.006691 | 234 | 212 | 234 | 212 | 234 | 212 | 118 | heavy chain of c9 | light chain of c9 | mus musculus | mus musculus | H;U | protein;protein | e2 glycoprotein;e3 glycoprotein | chikungunya virus;chikungunya virus | 49;18 | 19;8 | 0.83;0.8 | HL | train |
8yzk_C | 8yzk | orphan receptor gprc5d in complex with scfv150-18 | no | membrane protein | 2024-04-07 | 2024-07-03 | electron microscopy | 3.4 | N.A. | N.A. | 38898050 | 10.1038/s41467-024-49625-y | 0 | auth_asym_id | scFv- | N.A. | N.A. | C | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFASSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNPPVVFGGGTKLTVLGSRGGGGSGGGGSGGGGSLEMAQVQLVESGGGLVHPGGSLRLSCAASGFTFRSHSMNWVRQAPGKGLEWVSSISSDSTYTYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARSGGQWKYYDYWGQGTLVTVSS | N.A. | FASSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNPPVVFGGGTKLTVLGSRGGGGSGGGGSGGGGSLEMAQVQLVESGGGLVHPGGSLRLSCAASGFTFRSHSMNWVRQAPGKGLEWVSSISSDSTYTYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARSGGQWKYYDYWGQGTLVTVSS | N.A. | 15.725697 | 0 | 288 | 0 | 169 | 0 | 252 | 0 | 0 | scfv | N.A. | homo sapiens | N.A. | A | protein | soluble cytochrome b562,g-protein coupled receptor family c group 5 member d | escherichia coli | 52 | 11 | 0.46 | H_only | train |
8yzk_D | 8yzk | orphan receptor gprc5d in complex with scfv150-18 | no | membrane protein | 2024-04-07 | 2024-07-03 | electron microscopy | 3.4 | N.A. | N.A. | 38898050 | 10.1038/s41467-024-49625-y | 0 | auth_asym_id | scFv- | N.A. | N.A. | D | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFASSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNPPVVFGGGTKLTVLGSRGGGGSGGGGSGGGGSLEMAQVQLVESGGGLVHPGGSLRLSCAASGFTFRSHSMNWVRQAPGKGLEWVSSISSDSTYTYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARSGGQWKYYDYWGQGTLVTVSS | N.A. | FASSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNPPVVFGGGTKLTVLGSRGGGGSGGGGSGGGGSLEMAQVQLVESGGGLVHPGGSLRLSCAASGFTFRSHSMNWVRQAPGKGLEWVSSISSDSTYTYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARSGGQWKYYDYWGQGTLVTVSS | N.A. | 15.612114 | 0 | 288 | 0 | 169 | 0 | 252 | 0 | 0 | scfv | N.A. | homo sapiens | N.A. | B | protein | soluble cytochrome b562,g-protein coupled receptor family c group 5 member d | escherichia coli | 52 | 11 | 0.44 | H_only | train |
9bdf_C_D | 9bdf | influenza a virus hemagglutinin h3/darwin/6/2021 in complex with fab adi-85666 | no | viral protein | 2024-04-11 | 2024-11-13 | electron microscopy | 3.01 | N.A. | N.A. | 40267182 | 10.1126/sciadv.adu9140 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | C | D | EVQLLESGPGLVKPSETLSLTCSLSGGFVTRNSYYLSWVRQPPGKGMEWIGYVHHSGETKYNPSLKSRVTMSMDASKNQFSLRLRSVTAADTAVYYCARDLVEGGYIPFSYGLDVWGLGTTVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSSLEVLFQ | DIQLTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPERLIYAASSSLPGVPSRFRGSGSGTEFTLTISSLQPEDSATYFCLQYHNYPRTFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLLESGPGLVKPSETLSLTCSLSGGFVTRNSYYLSWVRQPPGKGMEWIGYVHHSGETKYNPSLKSRVTMSMDASKNQFSLRLRSVTAADTAVYYCARDLVEGGYIPFSYGLDVWGLGTTVTV | DIQLTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPERLIYAASSSLPGVPSRFRGSGSGTEFTLTISSLQPEDSATYFCLQYHNYPRTFGPGTKV | 14.642103 | 13.221105 | 240 | 214 | 124 | 104 | 124 | 104 | 36 | adi-85666 fab heavy chain | adi-85666 fab light chain | homo sapiens | homo sapiens | A | protein | hemagglutinin | influenza a virus | 51 | 22 | 0.85 | HL | train |
9bdf_E_J | 9bdf | influenza a virus hemagglutinin h3/darwin/6/2021 in complex with fab adi-85666 | no | viral protein | 2024-04-11 | 2024-11-13 | electron microscopy | 3.01 | N.A. | N.A. | 40267182 | 10.1126/sciadv.adu9140 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | E | J | EVQLLESGPGLVKPSETLSLTCSLSGGFVTRNSYYLSWVRQPPGKGMEWIGYVHHSGETKYNPSLKSRVTMSMDASKNQFSLRLRSVTAADTAVYYCARDLVEGGYIPFSYGLDVWGLGTTVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSSLEVLFQ | DIQLTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPERLIYAASSSLPGVPSRFRGSGSGTEFTLTISSLQPEDSATYFCLQYHNYPRTFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLLESGPGLVKPSETLSLTCSLSGGFVTRNSYYLSWVRQPPGKGMEWIGYVHHSGETKYNPSLKSRVTMSMDASKNQFSLRLRSVTAADTAVYYCARDLVEGGYIPFSYGLDVWGLGTTVTVS | DIQLTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPERLIYAASSSLPGVPSRFRGSGSGTEFTLTISSLQPEDSATYFCLQYHNYPRTFGPGTKV | 14.724372 | 13.216922 | 240 | 214 | 125 | 104 | 125 | 104 | 35 | adi-85666 fab heavy chain | adi-85666 fab light chain | homo sapiens | homo sapiens | G | protein | hemagglutinin | influenza a virus | 50 | 21 | 0.84 | HL | train |
9bdf_B_I | 9bdf | influenza a virus hemagglutinin h3/darwin/6/2021 in complex with fab adi-85666 | no | viral protein | 2024-04-11 | 2024-11-13 | electron microscopy | 3.01 | N.A. | N.A. | 40267182 | 10.1126/sciadv.adu9140 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | B | I | EVQLLESGPGLVKPSETLSLTCSLSGGFVTRNSYYLSWVRQPPGKGMEWIGYVHHSGETKYNPSLKSRVTMSMDASKNQFSLRLRSVTAADTAVYYCARDLVEGGYIPFSYGLDVWGLGTTVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSSLEVLFQ | DIQLTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPERLIYAASSSLPGVPSRFRGSGSGTEFTLTISSLQPEDSATYFCLQYHNYPRTFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLLESGPGLVKPSETLSLTCSLSGGFVTRNSYYLSWVRQPPGKGMEWIGYVHHSGETKYNPSLKSRVTMSMDASKNQFSLRLRSVTAADTAVYYCARDLVEGGYIPFSYGLDVWGLGTTVTVSGAS | DIQLTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPERLIYAASSSLPGVPSRFRGSGSGTEFTLTISSLQPEDSATYFCLQYHNYPRTFGPGTKV | 15.007597 | 13.203733 | 240 | 214 | 128 | 104 | 128 | 104 | 39 | adi-85666 fab heavy chain | adi-85666 fab light chain | homo sapiens | homo sapiens | H | protein | hemagglutinin | influenza a virus | 50 | 20 | 0.91 | HL | train |
9bdh_H_L | 9bdh | crystal structure of hiv-1 mper scaffold in complex with antibody fab ab45.1 | no | viral protein | 2024-04-11 | 2025-02-19 | x-ray diffraction | 3 | 0.29 | 0.269 | 38816616 | 10.1038/s41590-024-01844-7 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV7 | H | L | EVQLQQSGPELVKPGASVKISCKASGYTFTDYYMNWVKQSHGKSLEWIGDINPNSGGSSYNQKFKARATLTVDKSSSTAYMELRSLTSEDSAVYYCVKRGDFLRGYWYFDVWGTGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSPASLAVSLGQRATISCRASKSVSTSGYNYMHWYQQKPGQPPKLLIYLASNLESGVPVRFSGSGSGTDFTLNIHPVEEEDVATYYCQHSRELPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLQQSGPELVKPGASVKISCKASGYTFTDYYMNWVKQSHGKSLEWIGDINPNSGGSSYNQKFKARATLTVDKSSSTAYMELRSLTSEDSAVYYCVKRGDFLRGYWYFDVWGTGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSPASLAVSLGQRATISCRASKSVSTSGYNYMHWYQQKPGQPPKLLIYLASNLESGVPVRFSGSGSGTDFTLNIHPVEEEDVATYYCQHSRELPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.31792 | 23.822062 | 225 | 218 | 225 | 218 | 225 | 218 | 105 | fab 45.1 heavy chain | fab 45.1 light chain | mus musculus | mus musculus | C | protein | gt10.2 | mus musculus | 48 | 22 | 0.88 | HL | train |
9bdi_H_L | 9bdi | crystal structure of hiv-1 mper scaffold in complex with antibody fab ab45.2 | no | viral protein | 2024-04-11 | 2025-02-19 | x-ray diffraction | 2.07 | 0.283 | 0.235 | 38816616 | 10.1038/s41590-024-01844-7 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDCAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTRSAEFYDFWSGYYTGLEYFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDVGSYYCQYFWSIPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDCAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTRSAEFYDFWSGYYTGLEYFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDVGSYYCQYFWSIPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.836805 | 23.491585 | 234 | 214 | 234 | 214 | 234 | 214 | 98 | fab 45.2 heavy chain | fab 45.2 light chain | mus musculus | mus musculus | A | protein | gt10.2 glycan ko | mus musculus | 31 | 17 | 0.89 | HL | train |
9bdi_C_D | 9bdi | crystal structure of hiv-1 mper scaffold in complex with antibody fab ab45.2 | no | viral protein | 2024-04-11 | 2025-02-19 | x-ray diffraction | 2.07 | 0.283 | 0.235 | 38816616 | 10.1038/s41590-024-01844-7 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | C | D | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDCAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTRSAEFYDFWSGYYTGLEYFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDVGSYYCQYFWSIPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDCAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTRSAEFYDFWSGYYTGLEYFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDVGSYYCQYFWSIPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.833315 | 23.489521 | 234 | 214 | 234 | 214 | 234 | 214 | 98 | fab 45.2 heavy chain | fab 45.2 light chain | mus musculus | mus musculus | B | protein | gt10.2 glycan ko | mus musculus | 31 | 17 | 0.89 | HL | train |
9eza_A_C | 9eza | interleukin-31 receptor d1d2 in complex with nemolizumab derived scfv | no | cytokine | 2024-04-11 | 2025-07-16 | x-ray diffraction | 2.15 | 0.23 | 0.201 | N.A. | N.A. | 0 | auth_asym_id | VHVL:VHVL | N.A. | N.A. | A | C | MGSHHHHHHSSGDEVDGQVQLVQSGAEVKKPGASVKVSCKASGYTFTGYIMNWVRQAPGQGLEWMGLINPYNGGTDYNPQFQDRVTITADKSTSTAYMELSSLRSEDTAVYYCARDGYDDGPYTLETWGQGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCQASEDIYSFVAWYQQKPGKAPKLLIYNAQTEAQGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHHYDSPLTFGGGTKVEIK | MGSHHHHHHSSGDEVDGQVQLVQSGAEVKKPGASVKVSCKASGYTFTGYIMNWVRQAPGQGLEWMGLINPYNGGTDYNPQFQDRVTITADKSTSTAYMELSSLRSEDTAVYYCARDGYDDGPYTLETWGQGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCQASEDIYSFVAWYQQKPGKAPKLLIYNAQTEAQGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHHYDSPLTFGGGTKVEIK | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYIMNWVRQAPGQGLEWMGLINPYNGGTDYNPQFQDRVTITADKSTSTAYMELSSLRSEDTAVYYCARDGYDDGPYTLETWGQGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCQASEDIYSFVAWYQQKPGKAPKLLIYNAQTEAQGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHHYDSPLTFGGGTKVEIK | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYIMNWVRQAPGQGLEWMGLINPYNGGTDYNPQFQDRVTITADKSTSTAYMELSSLRSEDTAVYYCARDGYDDGPYTLETWGQGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCQASEDIYSFVAWYQQKPGKAPKLLIYNAQTEAQGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHHYDSPLTFGGGTKVEIK | 27.776482 | 27.59851 | 260 | 260 | 236 | 234 | 243 | 243 | 121 | nemolizumab scfv | nemolizumab scfv | mus musculus | mus musculus | B;D | protein;protein | interleukin-31 receptor subunit alpha;interleukin-31 receptor subunit alpha | homo sapiens;homo sapiens | 46;45 | 21;20 | 0.81;0.77 | HL | train |
9bdt_N | 9bdt | apolipoprotein b 100 bound to ldl receptor and legobody | no | lipid transport | 2024-04-12 | 2024-12-25 | electron microscopy | 5.4 | N.A. | N.A. | 39663455 | 10.1038/s41586-024-08223-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQAGGSLRLSCVASGYTDGAVNMGWFRQAPGKDRDWVAAISPGGGLTYYADSVKGRFTISQDKAKNTVYLQMNSLKPEDTAIYYCAAARSLAHFKLSQYNYWGQGTQVTVSSLEHHHHHH | N.A. | QVQLQESGGGLVQAGGSLRLSCVASGYTDGAVNMGWFRQAPGKDRDWVAAISPGGGLTYYADSVKGRFTISQDKAKNTVYLQMNSLKPEDTAIYYCAAARSLAHFKLSQYNYWGQGTQVTVSSLEHHH | N.A. | 14.636042 | 0 | 131 | 0 | 128 | 0 | 128 | 0 | 0 | apob100 nanobody 4 | N.A. | camelus bactrianus | N.A. | A | protein | apolipoprotein b-100 | homo sapiens | 53 | 17 | 0.77 | H_only | train |
9bdt_H_L | 9bdt | apolipoprotein b 100 bound to ldl receptor and legobody | no | lipid transport | 2024-04-12 | 2024-12-25 | electron microscopy | 5.4 | N.A. | N.A. | 39663455 | 10.1038/s41586-024-08223-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV4 | H | L | DVQLVESGGGLVQPGKSLRLSCAASGFTFSNFGMHWVRQAPEMGLEWVAYISSGSTTKYYGDTVKGRFTISRDNPKNTLYLQMNSLRSEDTAMYYCARRPLYDGDYGYPMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH | NIMLTQSPSSLAVSAGERVTMSCKSTQSILYNSNQKTYLAWYQQKPGQSPKLLIYWASTRASGVPDRFTGSGSGTDFTLTINSVQPEDLAVYYCHQYLSAWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | DVQLVESGGGLVQPGKSLRLSCAASGFTFSNFGMHWVRQAPEMGLEWVAYISSGSTTKYYGDTVKGRFTISRDNPKNTLYLQMNSLRSEDTAMYYCARRPLYDGDYGYPMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK | NIMLTQSPSSLAVSAGERVTMSCKSTQSILYNSNQKTYLAWYQQKPGQSPKLLIYWASTRASGVPDRFTGSGSGTDFTLTINSVQPEDLAVYYCHQYLSAWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN | 19.636843 | 23.404633 | 234 | 219 | 203 | 198 | 220 | 215 | 86 | legobody 8d3 fab heavy chain | legobody 8d3 fab light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9bdo_A | 9bdo | crystal structure of anti-abtcr nanobody vhh | no | antitumor protein | 2024-04-12 | 2025-04-16 | x-ray diffraction | 1.95 | 0.241 | 0.211 | 41041827 | 10.1158/1535-7163.MCT-24-1049 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | DVQLVESGGGVVQPGGSLRLSCVASGYVHKINFYGWYRQAPGKEREKVAHISIGDQTDYADSAKGRFTISRDESKNTVYLQMNSLRPEDTAAYYCRALSRIWPYDYWGQGTLVTVSS | N.A. | DVQLVESGGGVVQPGGSLRLSCVASGYVHKINFYGWYRQAPGKEREKVAHISIGDQTDYADSAKGRFTISRDESKNTVYLQMNSLRPEDTAAYYCRALSRIWPYDYWGQGTLVTVSS | N.A. | 14.004246 | 0 | 117 | 0 | 116 | 0 | 117 | 0 | 0 | tce01 nanobody vhh | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9bdo_B | 9bdo | crystal structure of anti-abtcr nanobody vhh | no | antitumor protein | 2024-04-12 | 2025-04-16 | x-ray diffraction | 1.95 | 0.241 | 0.211 | 41041827 | 10.1158/1535-7163.MCT-24-1049 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | DVQLVESGGGVVQPGGSLRLSCVASGYVHKINFYGWYRQAPGKEREKVAHISIGDQTDYADSAKGRFTISRDESKNTVYLQMNSLRPEDTAAYYCRALSRIWPYDYWGQGTLVTVSS | N.A. | DVQLVESGGGVVQPGGSLRLSCVASGYVHKINFYGWYRQAPGKEREKVAHISIGDQTDYADSAKGRFTISRDESKNTVYLQMNSLRPEDTAAYYCRALSRIWPYDYWGQGTLVTVSS | N.A. | 13.975784 | 0 | 117 | 0 | 113 | 0 | 117 | 0 | 0 | tce01 nanobody vhh | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9bdo_C | 9bdo | crystal structure of anti-abtcr nanobody vhh | no | antitumor protein | 2024-04-12 | 2025-04-16 | x-ray diffraction | 1.95 | 0.241 | 0.211 | 41041827 | 10.1158/1535-7163.MCT-24-1049 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | DVQLVESGGGVVQPGGSLRLSCVASGYVHKINFYGWYRQAPGKEREKVAHISIGDQTDYADSAKGRFTISRDESKNTVYLQMNSLRPEDTAAYYCRALSRIWPYDYWGQGTLVTVSS | N.A. | DVQLVESGGGVVQPGGSLRLSCVASGYVHKINFYGWYRQAPGKEREKVAHISIGDQTDYADSAKGRFTISRDESKNTVYLQMNSLRPEDTAAYYCRALSRIWPYDYWGQGTLVTVSS | N.A. | 14.030932 | 0 | 117 | 0 | 117 | 0 | 117 | 0 | 0 | tce01 nanobody vhh | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9ezu_B | 9ezu | structure of the single-domain antibody vhh_h1 in complex with human vsig4 | no | immune system | 2024-04-14 | 2025-10-29 | x-ray diffraction | 1.05 | 0.176 | 0.157 | 41519125 | 10.1016/j.str.2025.12.010 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGRTFSSYGMGWFRQAPGKEREFVAAIGPFGYETYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAGRWNRYGFEDQDNFDYWGQGTQVTVSSAAAHHHHHH | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGRTFSSYGMGWFRQAPGKEREFVAAIGPFGYETYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAGRWNRYGFEDQDNFDYWGQGTQVTVSSAAA | N.A. | 13.969369 | 0 | 134 | 0 | 128 | 0 | 128 | 0 | 0 | single-domain antibody vhh_h1 | N.A. | camelidae | N.A. | A | protein | v-set and immunoglobulin domain-containing protein 4 | homo sapiens | 36 | 18 | 1 | H_only | train |
9bei_H_L | 9bei | cryo-em structure of synthetic claudin-4 complex with clostridium perfringens enterotoxin c-terminal domain, sfab cop-2, and nanobody | no | membrane protein/immune sysytem | 2024-04-15 | 2024-04-24 | electron microscopy | 4.16 | N.A. | N.A. | 38898281 | 10.1038/s41586-024-07601-y | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYWSWYNSSHYIYSALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYEWAPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYWSWYNSSHYIYSALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYEWAPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 24.593098 | 23.529097 | 237 | 216 | 226 | 214 | 226 | 214 | 84 | cop-2 fab heavy chain | cop-2 fab light chain | escherichia coli | escherichia coli | B | protein | heat-labile enterotoxin b chain | clostridium perfringens | 42 | 20 | 0.91 | HL | train |
9bei_K | 9bei | cryo-em structure of synthetic claudin-4 complex with clostridium perfringens enterotoxin c-terminal domain, sfab cop-2, and nanobody | no | membrane protein/immune sysytem | 2024-04-15 | 2024-04-24 | electron microscopy | 4.16 | N.A. | N.A. | 38898281 | 10.1038/s41586-024-07601-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | GSVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | VQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.863528 | 0 | 121 | 0 | 119 | 0 | 119 | 0 | 0 | anti-fab nanobody | N.A. | escherichia coli | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8z3q_S | 8z3q | cryo-em structure of the hgpr4-gs complex in ph7.6 | no | membrane protein/immune system | 2024-04-15 | 2025-04-23 | electron microscopy | 2.76 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLE | N.A. | 17.671574 | 0 | 285 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 30;24 | 19;10 | 0.95;0.83 | H_only | train |
9f02_H_L | 9f02 | hiv-1 envelope glycoprotein (bg505 gp140 sosip.664) trimer in complex with three copies of elc07 broadly neutralizing antibody. | yes | viral protein | 2024-04-15 | 2025-04-23 | electron microscopy | 3.02 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | METDTLLLWVLLLWVPGSTGEVQLVQSGAELKKAGSSVKLSCQAYGVAFSTYSFHWVRQAPGQGLEWLGGFIPLVGKPNYTNKFRGRLTITADESARTTYMELRSLRSDDTAIYYCAGGGAYSSGGGRFHYFGMAVWGQGSTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCGSGENLYFQSAGHHHHHH | MTQTPASLLFLLLLWLPGAKCDIQLTQSPSTLSAPVGAGVTITCQASQSISNGLAWYQQKPGRAPKMLITEGSSLKSGVPDRFRGSGSGTHFILTISDLQPDDSATYFCQQYNTFPWTFGRGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAELKKAGSSVKLSCQAYGVAFSTYSFHWVRQAPGQGLEWLGGFIPLVGKPNYTNKFRGRLTITADESARTTYMELRSLRSDDTAIYYCAGGGAYSSGGGRFHYFGMAVWGQGSTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | IQLTQSPSTLSAPVGAGVTITCQASQSISNGLAWYQQKPGRAPKMLITEGSSLKSGVPDRFRGSGSGTHFILTISDLQPDDSATYFCQQYNTFPWTFGRGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.068556 | 23.489607 | 268 | 235 | 230 | 213 | 230 | 213 | 91 | elc07 heavy chain | elc07 light chain | homo sapiens | homo sapiens | A;C | protein;protein | transmembrane protein gp41;envelope glycoprotein gp160 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 29;16 | 14;8 | 0.88;0.89 | HL | train |
9f02_I_J | 9f02 | hiv-1 envelope glycoprotein (bg505 gp140 sosip.664) trimer in complex with three copies of elc07 broadly neutralizing antibody. | yes | viral protein | 2024-04-15 | 2025-04-23 | electron microscopy | 3.02 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | I | J | METDTLLLWVLLLWVPGSTGEVQLVQSGAELKKAGSSVKLSCQAYGVAFSTYSFHWVRQAPGQGLEWLGGFIPLVGKPNYTNKFRGRLTITADESARTTYMELRSLRSDDTAIYYCAGGGAYSSGGGRFHYFGMAVWGQGSTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCGSGENLYFQSAGHHHHHH | MTQTPASLLFLLLLWLPGAKCDIQLTQSPSTLSAPVGAGVTITCQASQSISNGLAWYQQKPGRAPKMLITEGSSLKSGVPDRFRGSGSGTHFILTISDLQPDDSATYFCQQYNTFPWTFGRGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAELKKAGSSVKLSCQAYGVAFSTYSFHWVRQAPGQGLEWLGGFIPLVGKPNYTNKFRGRLTITADESARTTYMELRSLRSDDTAIYYCAGGGAYSSGGGRFHYFGMAVWGQGSTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | IQLTQSPSTLSAPVGAGVTITCQASQSISNGLAWYQQKPGRAPKMLITEGSSLKSGVPDRFRGSGSGTHFILTISDLQPDDSATYFCQQYNTFPWTFGRGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.100254 | 23.52182 | 268 | 235 | 230 | 213 | 230 | 213 | 93 | elc07 heavy chain | elc07 light chain | homo sapiens | homo sapiens | E | protein | transmembrane protein gp41 | human immunodeficiency virus 1 | 29 | 14 | 0.88 | HL | train |
9f02_K_M | 9f02 | hiv-1 envelope glycoprotein (bg505 gp140 sosip.664) trimer in complex with three copies of elc07 broadly neutralizing antibody. | yes | viral protein | 2024-04-15 | 2025-04-23 | electron microscopy | 3.02 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | K | M | METDTLLLWVLLLWVPGSTGEVQLVQSGAELKKAGSSVKLSCQAYGVAFSTYSFHWVRQAPGQGLEWLGGFIPLVGKPNYTNKFRGRLTITADESARTTYMELRSLRSDDTAIYYCAGGGAYSSGGGRFHYFGMAVWGQGSTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCGSGENLYFQSAGHHHHHH | MTQTPASLLFLLLLWLPGAKCDIQLTQSPSTLSAPVGAGVTITCQASQSISNGLAWYQQKPGRAPKMLITEGSSLKSGVPDRFRGSGSGTHFILTISDLQPDDSATYFCQQYNTFPWTFGRGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAELKKAGSSVKLSCQAYGVAFSTYSFHWVRQAPGQGLEWLGGFIPLVGKPNYTNKFRGRLTITADESARTTYMELRSLRSDDTAIYYCAGGGAYSSGGGRFHYFGMAVWGQGSTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | IQLTQSPSTLSAPVGAGVTITCQASQSISNGLAWYQQKPGRAPKMLITEGSSLKSGVPDRFRGSGSGTHFILTISDLQPDDSATYFCQQYNTFPWTFGRGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.082037 | 23.496456 | 268 | 235 | 230 | 213 | 230 | 213 | 92 | elc07 heavy chain | elc07 light chain | homo sapiens | homo sapiens | F;N | protein;protein | transmembrane protein gp41;envelope glycoprotein gp160 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 30;14 | 14;6 | 0.82;0.86 | HL | train |
9ber_D_E | 9ber | cryo-em structure of the hiv-1 jr-fl idl env trimer in complex with pgt122 fab | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 4.1 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | D | E | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | 16.098692 | 13.766175 | 132 | 105 | 132 | 105 | 132 | 105 | 48 | pgt122 heavy chain | pgt122 light chain | homo sapiens | homo sapiens | A | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 22 | 10 | 0.91 | HL | train |
9ber_J_K | 9ber | cryo-em structure of the hiv-1 jr-fl idl env trimer in complex with pgt122 fab | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 4.1 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | J | K | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | 16.00222 | 13.787504 | 132 | 105 | 132 | 105 | 132 | 105 | 41 | pgt122 heavy chain | pgt122 light chain | homo sapiens | homo sapiens | F | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 21 | 10 | 0.91 | HL | train |
9ber_H_L | 9ber | cryo-em structure of the hiv-1 jr-fl idl env trimer in complex with pgt122 fab | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 4.1 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | H | L | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | 16.149992 | 13.715453 | 132 | 105 | 132 | 105 | 132 | 105 | 46 | pgt122 heavy chain | pgt122 light chain | homo sapiens | homo sapiens | G | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 22 | 10 | 0.91 | HL | train |
9bew_F_I | 9bew | cryo-em structure of the hiv-1 bg505 idl env trimer in complex with 3bnc117 and 10-1074 fabs | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 3.3 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | F | I | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTV | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRL | 14.300824 | 13.102606 | 226 | 206 | 121 | 96 | 121 | 96 | 35 | 3bnc117 heavy chain | 3bnc117 light chain | homo sapiens | homo sapiens | A | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 52 | 12 | 0.57 | HL | train |
9bew_J_K | 9bew | cryo-em structure of the hiv-1 bg505 idl env trimer in complex with 3bnc117 and 10-1074 fabs | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 3.3 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | J | K | QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SYVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA | YVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG | 16.426554 | 13.796207 | 235 | 214 | 133 | 108 | 133 | 108 | 51 | 10-1074 heavy chain | 10-1074 light chain | homo sapiens | homo sapiens | A | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 30 | 14 | 0.93 | HL | train |
9bew_C_D | 9bew | cryo-em structure of the hiv-1 bg505 idl env trimer in complex with 3bnc117 and 10-1074 fabs | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 3.3 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | C | D | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTV | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRL | 14.300828 | 13.102628 | 226 | 206 | 121 | 96 | 121 | 96 | 36 | 3bnc117 heavy chain | 3bnc117 light chain | homo sapiens | homo sapiens | G | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 51 | 12 | 0.57 | HL | train |
9bew_H_L | 9bew | cryo-em structure of the hiv-1 bg505 idl env trimer in complex with 3bnc117 and 10-1074 fabs | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 3.3 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | H | L | QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SYVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA | YVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG | 16.426567 | 13.796207 | 235 | 214 | 133 | 108 | 133 | 108 | 51 | 10-1074 heavy chain | 10-1074 light chain | homo sapiens | homo sapiens | G | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 30 | 14 | 0.93 | HL | train |
9bew_O_P | 9bew | cryo-em structure of the hiv-1 bg505 idl env trimer in complex with 3bnc117 and 10-1074 fabs | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 3.3 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | O | P | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTV | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRL | 14.300806 | 13.102633 | 226 | 206 | 121 | 96 | 121 | 96 | 36 | 3bnc117 heavy chain | 3bnc117 light chain | homo sapiens | homo sapiens | M | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 52 | 12 | 0.57 | HL | train |
9bew_Q_R | 9bew | cryo-em structure of the hiv-1 bg505 idl env trimer in complex with 3bnc117 and 10-1074 fabs | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 3.3 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | Q | R | QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SYVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA | YVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG | 16.426567 | 13.796199 | 235 | 214 | 133 | 108 | 133 | 108 | 51 | 10-1074 heavy chain | 10-1074 light chain | homo sapiens | homo sapiens | M | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 30 | 14 | 0.93 | HL | train |
9bf6_D_E | 9bf6 | cryo-em structure of the hiv-1 wito idl env trimer in complex with pgt122 fab | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 4.5 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | D | E | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | 16.44844 | 13.934174 | 132 | 105 | 132 | 105 | 132 | 105 | 46 | pgt122 heavy chain | pgt122 light chain | homo sapiens | homo sapiens | C | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 25 | 11 | 0.92 | HL | train |
9bf6_G_H | 9bf6 | cryo-em structure of the hiv-1 wito idl env trimer in complex with pgt122 fab | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 4.5 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | G | H | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | 16.438643 | 13.931618 | 132 | 105 | 132 | 105 | 132 | 105 | 47 | pgt122 heavy chain | pgt122 light chain | homo sapiens | homo sapiens | F | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 29 | 13 | 0.93 | HL | train |
9bf6_K_L | 9bf6 | cryo-em structure of the hiv-1 wito idl env trimer in complex with pgt122 fab | no | viral protein/immune system | 2024-04-16 | 2024-07-31 | electron microscopy | 4.5 | N.A. | N.A. | 39028623 | 10.1016/j.celrep.2024.114518 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | K | L | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS | TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL | 16.430834 | 13.918242 | 132 | 105 | 132 | 105 | 132 | 105 | 47 | pgt122 heavy chain | pgt122 light chain | homo sapiens | homo sapiens | J | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 28 | 14 | 0.93 | HL | train |
8z4c_A_D | 8z4c | the fab fragment of anti-fibrin monoclonal antibody 59d8 | no | immune system | 2024-04-17 | 2025-04-23 | x-ray diffraction | 2.06 | 0.234 | 0.198 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | A | D | QVQLQQSGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVASISSGGRHTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYFCARQEGDYDDWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVHHHHHHHH | DIELTQSPLTLSVIIGQPASISCKSSQSLLYSDGTTYLNWLLQRPGQSPKRLIYLVSKVDSGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPFTFGSGTKLELKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQSGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVASISSGGRHTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYFCARQEGDYDDWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVHHHH | DIELTQSPLTLSVIIGQPASISCKSSQSLLYSDGTTYLNWLLQRPGQSPKRLIYLVSKVDSGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPFTFGSGTKLELKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.138159 | 23.678366 | 222 | 220 | 218 | 220 | 218 | 220 | 100 | fab 59d8 heavy chain | fab 59d8 light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8z4c_H_L | 8z4c | the fab fragment of anti-fibrin monoclonal antibody 59d8 | no | immune system | 2024-04-17 | 2025-04-23 | x-ray diffraction | 2.06 | 0.234 | 0.198 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | H | L | QVQLQQSGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVASISSGGRHTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYFCARQEGDYDDWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVHHHHHHHH | DIELTQSPLTLSVIIGQPASISCKSSQSLLYSDGTTYLNWLLQRPGQSPKRLIYLVSKVDSGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPFTFGSGTKLELKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQSGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVASISSGGRHTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYFCARQEGDYDDWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVHHHHH | DIELTQSPLTLSVIIGQPASISCKSSQSLLYSDGTTYLNWLLQRPGQSPKRLIYLVSKVDSGVPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPFTFGSGTKLELKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 20.485846 | 23.600748 | 222 | 220 | 216 | 220 | 219 | 220 | 101 | fab 59d8 heavy chain | fab 59d8 light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9bge_H_L | 9bge | cryo-em structure of mab8-24 bound to 426c.wito.tm.sosip | no | immune system | 2024-04-18 | 2024-09-04 | electron microscopy | 4.2 | N.A. | N.A. | 39240111 | 10.1128/jvi.00744-24 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV4 | H | L | QVQLVQSGPEVKEPGASVRVSCKATGYTFTDHFIHWVRQAPGQGLDWMGWINPFRGGTNYPQKFQGRVTMTRDTSFTTAYMELNRLRSDDTAVYFCARGKNSDYNWDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | DIVMSQSPSSLAVSLGERITLSCKSSLTLIYSYNGENYLAWYQQKPGQSPKLLIYSTSTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYEYFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTH | VQLVQSGPEVKEPGASVRVSCKATGYTFTDHFIHWVRQAPGQGLDWMGWINPFRGGTNYPQKFQGRVTMTRDTSFTTAYMELNRLRSDDTAVYFCARGKNSDYNWDFQHWGQGTLVTVS | VMSQSPSSLAVSLGERITLSCKSSLTLIYSYNGENYLAWYQQKPGQSPKLLIYSTSTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYEYFGGGTKLEIK | 13.908676 | 13.571005 | 233 | 200 | 119 | 104 | 119 | 107 | 33 | fv domain of heavy chain of mab 8-24 | fv domain of light chain of mab 8-24 | mus musculus | mus musculus | A | protein | 426c.wito.tm.sosip | human immunodeficiency virus 1 | 62 | 23 | 0.79 | HL | train |
9bge_D_E | 9bge | cryo-em structure of mab8-24 bound to 426c.wito.tm.sosip | no | immune system | 2024-04-18 | 2024-09-04 | electron microscopy | 4.2 | N.A. | N.A. | 39240111 | 10.1128/jvi.00744-24 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV4 | D | E | QVQLVQSGPEVKEPGASVRVSCKATGYTFTDHFIHWVRQAPGQGLDWMGWINPFRGGTNYPQKFQGRVTMTRDTSFTTAYMELNRLRSDDTAVYFCARGKNSDYNWDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | DIVMSQSPSSLAVSLGERITLSCKSSLTLIYSYNGENYLAWYQQKPGQSPKLLIYSTSTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYEYFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTH | VQLVQSGPEVKEPGASVRVSCKATGYTFTDHFIHWVRQAPGQGLDWMGWINPFRGGTNYPQKFQGRVTMTRDTSFTTAYMELNRLRSDDTAVYFCARGKNSDYNWDFQHWGQGTLVTVS | VMSQSPSSLAVSLGERITLSCKSSLTLIYSYNGENYLAWYQQKPGQSPKLLIYSTSTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYEYFGGGTKLEIK | 13.90993 | 13.573111 | 233 | 200 | 119 | 104 | 119 | 107 | 33 | fv domain of heavy chain of mab 8-24 | fv domain of light chain of mab 8-24 | mus musculus | mus musculus | B | protein | 426c.wito.tm.sosip | human immunodeficiency virus 1 | 62 | 22 | 0.79 | HL | train |
9bge_F_G | 9bge | cryo-em structure of mab8-24 bound to 426c.wito.tm.sosip | no | immune system | 2024-04-18 | 2024-09-04 | electron microscopy | 4.2 | N.A. | N.A. | 39240111 | 10.1128/jvi.00744-24 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV4 | F | G | QVQLVQSGPEVKEPGASVRVSCKATGYTFTDHFIHWVRQAPGQGLDWMGWINPFRGGTNYPQKFQGRVTMTRDTSFTTAYMELNRLRSDDTAVYFCARGKNSDYNWDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | DIVMSQSPSSLAVSLGERITLSCKSSLTLIYSYNGENYLAWYQQKPGQSPKLLIYSTSTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYEYFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTH | VQLVQSGPEVKEPGASVRVSCKATGYTFTDHFIHWVRQAPGQGLDWMGWINPFRGGTNYPQKFQGRVTMTRDTSFTTAYMELNRLRSDDTAVYFCARGKNSDYNWDFQHWGQGTLVTVS | VMSQSPSSLAVSLGERITLSCKSSLTLIYSYNGENYLAWYQQKPGQSPKLLIYSTSTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYEYFGGGTKLEIK | 13.910271 | 13.572612 | 233 | 200 | 119 | 104 | 119 | 107 | 33 | fv domain of heavy chain of mab 8-24 | fv domain of light chain of mab 8-24 | mus musculus | mus musculus | C | protein | 426c.wito.tm.sosip | human immunodeficiency virus 1 | 62 | 23 | 0.79 | HL | train |
8z65_S | 8z65 | cryo-em structure of the hgpr4-gs complex in ph7.2 | no | membrane protein/immune system | 2024-04-18 | 2025-04-23 | electron microscopy | 2.97 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLE | N.A. | 17.311445 | 0 | 285 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 37;23 | 24;10 | 0.96;0.83 | H_only | train |
8z68_S | 8z68 | cryo-em structure of the hgpr68-gs complex in ph6.8 | no | membrane protein/immune system | 2024-04-18 | 2025-04-23 | electron microscopy | 2.64 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.156567 | 0 | 285 | 0 | 229 | 0 | 247 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 32;25 | 20;10 | 0.95;0.83 | H_only | train |
9f1i_H_L | 9f1i | crystal structure of a first-in-class antibody for alpha-1,6-fucosylated prostate-specific antigen, target bound | no | immune system | 2024-04-19 | 2024-07-31 | x-ray diffraction | 1.38 | 0.186 | 0.155 | 39020051 | 10.1038/s41598-024-67545-1 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | QSLEESGGDLVKPGASLTLTCTASGFSFSAGYDMCWVRQAPGKGLEWIACIYADGSGSTYYANWAKGRFTISLASSTTVTLQMTGLTAADTATYFCAREGADGPDYGYAAFSLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSSQPVTCNVAHPATNTKVDKTVAPSTCSKPTCP | DVVMTQTPASVEAAVGGTVTIKCQASQSISNYFSWYQQKPGQPPKLLIYKASTLASGVPSRFKGSGSGTEFTLTISDLECADAATYYCQSFYGSVTSDYGGFAFGGGTEVVVKGDPVAPTVLIFPPAADQVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTQYNSHKEYTCKVTQGTTSVVQSFNRGDC | SLEESGGDLVKPGASLTLTCTASGFSFSAGYDMCWVRQAPGKGLEWIACIYADGSGSTYYANWAKGRFTISLASSTTVTLQMTGLTAADTATYFCAREGADGPDYGYAAFSLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSSQPVTCNVAHPATNTKVDKTVAPSTC | DVVMTQTPASVEAAVGGTVTIKCQASQSISNYFSWYQQKPGQPPKLLIYKASTLASGVPSRFKGSGSGTEFTLTISDLECADAATYYCQSFYGSVTSDYGGFAFGGGTEVVVKGDPVAPTVLIFPPAADQVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTQYNSHKEYTCKVTQGTTSVVQSFNRGDC | 21.29094 | 23.399757 | 230 | 217 | 223 | 217 | 223 | 217 | 100 | heavy chain rabbit fab | light chain rabbit fab | oryctolagus cuniculus | oryctolagus cuniculus | P | peptide | prostate specific antigen | homo sapiens | 30 | 19 | 0.9 | HL | train |
9f1i_I_M | 9f1i | crystal structure of a first-in-class antibody for alpha-1,6-fucosylated prostate-specific antigen, target bound | no | immune system | 2024-04-19 | 2024-07-31 | x-ray diffraction | 1.38 | 0.186 | 0.155 | 39020051 | 10.1038/s41598-024-67545-1 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | I | M | QSLEESGGDLVKPGASLTLTCTASGFSFSAGYDMCWVRQAPGKGLEWIACIYADGSGSTYYANWAKGRFTISLASSTTVTLQMTGLTAADTATYFCAREGADGPDYGYAAFSLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSSQPVTCNVAHPATNTKVDKTVAPSTCSKPTCP | DVVMTQTPASVEAAVGGTVTIKCQASQSISNYFSWYQQKPGQPPKLLIYKASTLASGVPSRFKGSGSGTEFTLTISDLECADAATYYCQSFYGSVTSDYGGFAFGGGTEVVVKGDPVAPTVLIFPPAADQVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTQYNSHKEYTCKVTQGTTSVVQSFNRGDC | SLEESGGDLVKPGASLTLTCTASGFSFSAGYDMCWVRQAPGKGLEWIACIYADGSGSTYYANWAKGRFTISLASSTTVTLQMTGLTAADTATYFCAREGADGPDYGYAAFSLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSSQPVTCNVAHPATNTKVDKTVAPSTC | VVMTQTPASVEAAVGGTVTIKCQASQSISNYFSWYQQKPGQPPKLLIYKASTLASGVPSRFKGSGSGTEFTLTISDLECADAATYYCQSFYGSVTSDYGGFAFGGGTEVVVKGDPVAPTVLIFPPAADQVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTQYNSHKEYTCKVTQGTTSVVQSFNRGDC | 21.377115 | 23.139406 | 230 | 217 | 223 | 216 | 223 | 216 | 97 | heavy chain rabbit fab | light chain rabbit fab | oryctolagus cuniculus | oryctolagus cuniculus | Q | peptide | prostate specific antigen | homo sapiens | 32 | 19 | 0.86 | HL | train |
9bhb_H_K | 9bhb | cryo-em structure of human monoclonal antibody c74 targeting pfd1235w (cidra1.6) pfemp1 | no | immune system | 2024-04-19 | 2024-10-02 | electron microscopy | 3.1 | N.A. | N.A. | 39567685 | 10.1038/s41586-024-08220-3 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | K | EVQLVQSGGALVRPGGSLRLSCAASGFDFSDFEMNWVRQAPGKGLEWISYISKISAASFYADSVEGRFTISRDNTKNLLWLEMTSLRDEDTAVYYCARDLPGYLERVFDLWGQGTLVSVSS | EIVLTQSPATLSLSPGEDATLSCRASQSVGSALAWYQHRPGQSPRLLIYDASTRATGIPARFSGSGSGTEFTLTVSSLTSEDFAVYYCQEYKNSVPPTWTFGQGTKVEIKRTV | VQLVQSGGALVRPGGSLRLSCAASGFDFSDFEMNWVRQAPGKGLEWISYISKISAASFYADSVEGRFTISRDNTKNLLWLEMTSLRDEDTAVYYCARDLPGYLERVFDLWGQGTLVSVS | IVLTQSPATLSLSPGEDATLSCRASQSVGSALAWYQHRPGQSPRLLIYDASTRATGIPARFSGSGSGTEFTLTVSSLTSEDFAVYYCQEYKNSVPPTWTFGQGTKVEIKRT | 13.545833 | 13.688552 | 121 | 113 | 119 | 111 | 119 | 111 | 39 | c74 heavy chain | c74 kappa chain | homo sapiens | homo sapiens | A | protein | erythrocyte membrane protein 1, pfemp1 | plasmodium falciparum 3d7 | 34 | 16 | 0.94 | HL | train |
8z6r_E_D | 8z6r | structure of xbb.1.16 s trimer with 3 down-rbds complex with antibody cyfn1006-1. | yes | viral protein/immune system | 2024-04-19 | 2025-01-29 | electron microscopy | 2.87 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | E | D | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.521055 | 23.336088 | 451 | 215 | 202 | 191 | 219 | 200 | 79 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein,fibritin,spike glycoprotein,fibritin,spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 51 | 25 | 0.93 | HL | train |
8z6r_G_F | 8z6r | structure of xbb.1.16 s trimer with 3 down-rbds complex with antibody cyfn1006-1. | yes | viral protein/immune system | 2024-04-19 | 2025-01-29 | electron microscopy | 2.87 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | G | F | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.772738 | 23.674545 | 451 | 215 | 198 | 192 | 215 | 200 | 84 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein,fibritin,spike glycoprotein,fibritin,spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 49 | 23 | 0.88 | HL | train |
8z6r_I_H | 8z6r | structure of xbb.1.16 s trimer with 3 down-rbds complex with antibody cyfn1006-1. | yes | viral protein/immune system | 2024-04-19 | 2025-01-29 | electron microscopy | 2.87 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | I | H | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.591293 | 23.440304 | 451 | 215 | 202 | 192 | 219 | 200 | 84 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein,fibritin,spike glycoprotein,fibritin,spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 50 | 24 | 0.89 | HL | train |
8z6t_B_C | 8z6t | structure of xbb.1.16 rbd in complex with antibody cyfn1006-1. | yes | viral protein/immune system | 2024-04-19 | 2025-01-29 | electron microscopy | 2.92 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | B | C | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.306551 | 23.249916 | 451 | 215 | 202 | 191 | 219 | 200 | 82 | cyfn1006-1 heavy chain | cyfn1006-1 ligth chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 49 | 24 | 0.89 | HL | train |
8z6x_B_C | 8z6x | structure of eg.5.1 rbd in complex with antibody cyfn1006-2. | yes | viral protein/immune system | 2024-04-19 | 2025-01-29 | electron microscopy | 2.96 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | B | C | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 22.989697 | 23.921068 | 451 | 215 | 219 | 203 | 219 | 203 | 86 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 49 | 24 | 0.86 | HL | train |
8z6q_E_D | 8z6q | sars-cov-2 xbb.1.16 spike in complex with cyfn1006-1(s-cyfn1006-1 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 5.41 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | E | D | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.517748 | 23.331614 | 451 | 215 | 202 | 191 | 219 | 200 | 81 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 53 | 25 | 0.89 | HL | train |
8z6q_G_F | 8z6q | sars-cov-2 xbb.1.16 spike in complex with cyfn1006-1(s-cyfn1006-1 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 5.41 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | G | F | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.750605 | 23.664196 | 451 | 215 | 198 | 192 | 215 | 200 | 87 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 47 | 22 | 0.88 | HL | train |
8z6q_I_H | 8z6q | sars-cov-2 xbb.1.16 spike in complex with cyfn1006-1(s-cyfn1006-1 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 5.41 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | I | H | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.572681 | 23.43883 | 451 | 215 | 202 | 192 | 219 | 200 | 86 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 49 | 24 | 0.89 | HL | train |
8z6q_N_M | 8z6q | sars-cov-2 xbb.1.16 spike in complex with cyfn1006-1(s-cyfn1006-1 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 5.41 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | N | M | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.521599 | 23.347466 | 451 | 215 | 202 | 191 | 219 | 200 | 80 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | J | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 50 | 24 | 0.89 | HL | train |
8z6q_P_O | 8z6q | sars-cov-2 xbb.1.16 spike in complex with cyfn1006-1(s-cyfn1006-1 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 5.41 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | P | O | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.775969 | 23.69491 | 451 | 215 | 198 | 192 | 215 | 200 | 86 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | K | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 49 | 23 | 0.88 | HL | train |
8z6q_R_Q | 8z6q | sars-cov-2 xbb.1.16 spike in complex with cyfn1006-1(s-cyfn1006-1 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 5.41 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | R | Q | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.588816 | 23.456223 | 451 | 215 | 202 | 192 | 219 | 200 | 82 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | L | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 51 | 24 | 0.86 | HL | train |
8z6s_E_D | 8z6s | structure of xbb.1.16 s trimer with 2 down-rbds complex with antibody cyfn1006-1. | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 2.84 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | E | D | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.514393 | 23.319569 | 451 | 215 | 202 | 194 | 219 | 200 | 90 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 49 | 23 | 0.88 | HL | train |
8z6s_G_F | 8z6s | structure of xbb.1.16 s trimer with 2 down-rbds complex with antibody cyfn1006-1. | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 2.84 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | G | F | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.470053 | 23.299469 | 451 | 215 | 202 | 192 | 219 | 200 | 96 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 48 | 23 | 0.88 | HL | train |
8z6s_I_H | 8z6s | structure of xbb.1.16 s trimer with 2 down-rbds complex with antibody cyfn1006-1. | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 2.84 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | I | H | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | QSALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPRSVSGSLGQSVTISCTGISSDVGGDNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHE | 20.44082 | 23.316357 | 451 | 215 | 202 | 192 | 219 | 200 | 88 | cyfn1006-1 heavy chain | cyfn1006-1 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 50 | 24 | 0.92 | HL | train |
8z6u_H_K | 8z6u | sars-cov-2 eg.5.1 spike in complex with cyfn1006-2(s-cyfn1006-2 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 3.83 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | H | K | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 22.99645 | 24.006693 | 218 | 215 | 218 | 203 | 218 | 203 | 83 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 43 | 22 | 0.96 | HL | train |
8z6u_I_L | 8z6u | sars-cov-2 eg.5.1 spike in complex with cyfn1006-2(s-cyfn1006-2 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 3.83 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | I | L | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 22.941921 | 23.925707 | 218 | 215 | 218 | 203 | 218 | 203 | 88 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 42 | 21 | 0.95 | HL | train |
8z6u_G_J | 8z6u | sars-cov-2 eg.5.1 spike in complex with cyfn1006-2(s-cyfn1006-2 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 3.83 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | G | J | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 24.40797 | 24.56245 | 218 | 215 | 218 | 203 | 218 | 203 | 86 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 43 | 21 | 0.95 | HL | train |
8z6u_N_Q | 8z6u | sars-cov-2 eg.5.1 spike in complex with cyfn1006-2(s-cyfn1006-2 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 3.83 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | N | Q | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 23.002752 | 24.007902 | 218 | 215 | 218 | 203 | 218 | 203 | 84 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | homo sapiens | homo sapiens | D | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 43 | 22 | 0.96 | HL | train |
8z6u_O_R | 8z6u | sars-cov-2 eg.5.1 spike in complex with cyfn1006-2(s-cyfn1006-2 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 3.83 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | O | R | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 22.948343 | 23.857258 | 218 | 215 | 218 | 203 | 218 | 203 | 87 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | homo sapiens | homo sapiens | E | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 42 | 21 | 0.95 | HL | train |
8z6u_M_P | 8z6u | sars-cov-2 eg.5.1 spike in complex with cyfn1006-2(s-cyfn1006-2 dimer trimer). | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 3.83 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | M | P | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 24.420954 | 24.650007 | 218 | 215 | 218 | 203 | 218 | 203 | 86 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | homo sapiens | homo sapiens | F | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 42 | 20 | 0.95 | HL | train |
8z6w_H_K | 8z6w | structure of eg.5.1 s trimer with 3 down-rbds complex with antibody cyfn1006-2. | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 3.04 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | H | K | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 23.001541 | 23.991995 | 218 | 215 | 218 | 203 | 218 | 203 | 86 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 41 | 22 | 0.96 | HL | train |
8z6w_I_L | 8z6w | structure of eg.5.1 s trimer with 3 down-rbds complex with antibody cyfn1006-2. | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 3.04 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | I | L | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 22.952568 | 23.925304 | 218 | 215 | 218 | 203 | 218 | 203 | 88 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 42 | 22 | 1 | HL | train |
8z6w_G_J | 8z6w | structure of eg.5.1 s trimer with 3 down-rbds complex with antibody cyfn1006-2. | yes | viral protein/immune system | 2024-04-19 | 2025-02-12 | electron microscopy | 3.04 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | G | J | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 24.412725 | 24.64539 | 218 | 215 | 218 | 203 | 218 | 203 | 87 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 43 | 22 | 0.96 | HL | train |
8z7j_S | 8z7j | cryo-em structure of apjr-gi complex with agonistic antibody | no | signaling protein | 2024-04-20 | 2025-01-22 | electron microscopy | 3.12 | N.A. | N.A. | 39747115 | 10.1038/s41467-024-55555-6 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | 17.288357 | 0 | 259 | 0 | 234 | 0 | 248 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 33;25 | 21;11 | 0.95;0.79 | H_only | train |
8z7j_N | 8z7j | cryo-em structure of apjr-gi complex with agonistic antibody | no | signaling protein | 2024-04-20 | 2025-01-22 | electron microscopy | 3.12 | N.A. | N.A. | 39747115 | 10.1038/s41467-024-55555-6 | 0 | auth_asym_id | VH | IGHV3 | N.A. | N | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVSS | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVSS | N.A. | 14.424457 | 0 | 130 | 0 | 130 | 0 | 130 | 0 | 0 | agonistic antibody | N.A. | homo sapiens | N.A. | R | protein | soluble cytochrome b562,apelin receptor | homo sapiens | 84 | 28 | 0.74 | H_only | train |
9bhh_R_Q | 9bhh | cryo-em structure of chikungunya virus asymmetric unit with fab im-ckv063 | no | viral protein/immune system | 2024-04-20 | 2025-10-22 | electron microscopy | 3.5 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | R | Q | QVQLVQSGAEVKKPGSAVKVSCKASGGTLRKYAISWLRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTTTPYTTTPYTSTAYIELTSLRSEDTAVYYCARDLGPLTGYSYSYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | EIVMTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYANSRRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | QVQLVQSGAEVKKPGSAVKVSCKASGGTLRKYAISWLRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTTTPYTTTPYTSTAYIELTSLRSEDTAVYYCARDLGPLTGYSYSYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | EIVMTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYANSRRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 24.657877 | 22.966843 | 242 | 213 | 242 | 213 | 242 | 213 | 107 | heavy chain of im-ckv063 | light chain of im-ckv063 | mus musculus | mus musculus | E;F | protein;protein | e2 glycoprotein;e2 glycoprotein | chikungunya virus;chikungunya virus | 53;55 | 16;19 | 0.64;0.61 | HL | train |
9bhh_N_M | 9bhh | cryo-em structure of chikungunya virus asymmetric unit with fab im-ckv063 | no | viral protein/immune system | 2024-04-20 | 2025-10-22 | electron microscopy | 3.5 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | N | M | QVQLVQSGAEVKKPGSAVKVSCKASGGTLRKYAISWLRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTTTPYTTTPYTSTAYIELTSLRSEDTAVYYCARDLGPLTGYSYSYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | EIVMTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYANSRRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | QVQLVQSGAEVKKPGSAVKVSCKASGGTLRKYAISWLRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTTTPYTTTPYTSTAYIELTSLRSEDTAVYYCARDLGPLTGYSYSYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | EIVMTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYANSRRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 24.600319 | 23.178734 | 242 | 213 | 242 | 213 | 242 | 213 | 107 | heavy chain of im-ckv063 | light chain of im-ckv063 | mus musculus | mus musculus | E;G | protein;protein | e2 glycoprotein;e2 glycoprotein | chikungunya virus;chikungunya virus | 53;58 | 18;18 | 0.62;0.62 | HL | train |
9bhh_P_O | 9bhh | cryo-em structure of chikungunya virus asymmetric unit with fab im-ckv063 | no | viral protein/immune system | 2024-04-20 | 2025-10-22 | electron microscopy | 3.5 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | P | O | QVQLVQSGAEVKKPGSAVKVSCKASGGTLRKYAISWLRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTTTPYTTTPYTSTAYIELTSLRSEDTAVYYCARDLGPLTGYSYSYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | EIVMTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYANSRRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | QVQLVQSGAEVKKPGSAVKVSCKASGGTLRKYAISWLRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTTTPYTTTPYTSTAYIELTSLRSEDTAVYYCARDLGPLTGYSYSYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | EIVMTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYANSRRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 24.695345 | 23.235054 | 242 | 213 | 242 | 213 | 242 | 213 | 104 | heavy chain of im-ckv063 | light chain of im-ckv063 | mus musculus | mus musculus | F;G | protein;protein | e2 glycoprotein;e2 glycoprotein | chikungunya virus;chikungunya virus | 46;55 | 11;17 | 0.55;0.59 | HL | train |
9bhh_T_S | 9bhh | cryo-em structure of chikungunya virus asymmetric unit with fab im-ckv063 | no | viral protein/immune system | 2024-04-20 | 2025-10-22 | electron microscopy | 3.5 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | T | S | QVQLVQSGAEVKKPGSAVKVSCKASGGTLRKYAISWLRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTTTPYTTTPYTSTAYIELTSLRSEDTAVYYCARDLGPLTGYSYSYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | EIVMTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYANSRRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | QVQLVQSGAEVKKPGSAVKVSCKASGGTLRKYAISWLRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTTTPYTTTPYTSTAYIELTSLRSEDTAVYYCARDLGPLTGYSYSYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | EIVMTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYANSRRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 24.644861 | 23.164783 | 242 | 213 | 242 | 213 | 242 | 213 | 100 | heavy chain of im-ckv063 | light chain of im-ckv063 | mus musculus | mus musculus | H | protein | e2 glycoprotein | chikungunya virus | 49 | 14 | 0.54 | HL | train |
9bhl_N | 9bhl | human proton sensing receptor gpr65 in complex with minigs | yes | signaling protein | 2024-04-21 | 2025-01-22 | electron microscopy | 2.8 | N.A. | N.A. | 39753132 | 10.1016/j.cell.2024.11.036 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSGSEDQVDPRLIDGK | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.918036 | 0 | 142 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 47;26 | 13;11 | 0.57;0.85 | H_only | train |
8z8a_S | 8z8a | cryo-em structure of the lactate-bound human hcar1-gi1 complex | no | membrane protein | 2024-04-21 | 2025-10-29 | electron microscopy | 2.82 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGS | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.157093 | 0 | 250 | 0 | 234 | 0 | 247 | 0 | 0 | single fab chain (scfv16) | N.A. | synthetic construct | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 23;35 | 10;22 | 0.77;0.96 | H_only | train |
8z8b_S | 8z8b | cryo-em structure of human hcar1-gi complex without ligand (apo state) | no | membrane protein | 2024-04-21 | 2025-10-29 | electron microscopy | 2.65 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGS | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.157093 | 0 | 250 | 0 | 234 | 0 | 247 | 0 | 0 | single fab chain (scfv16) | N.A. | synthetic construct | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 23;36 | 10;22 | 0.77;0.92 | H_only | train |
8z8v_B | 8z8v | crystal structure of human serum albumin in complex with alb8(vhh) domain of ozoralizumab | no | transport protein | 2024-04-22 | 2024-09-04 | x-ray diffraction | 2.05 | 0.239 | 0.202 | 39083975 | 10.1016/j.bbrc.2024.150454 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | EVQLVESGGGLVQPGNSLRLSCAASGFTFSSFGMSWVRQAPGKGLEWVSSISGSGSDTLYADSVKGRFTISRDNAKTTLYLQMNSLRPEDTAVYYCTIGGSLSRSSQGTLVTVSSTSHHHHHH | N.A. | EVQLVESGGGLVQPGNSLRLSCAASGFTFSSFGMSWVRQAPGKGLEWVSSISGSGSDTLYADSVKGRFTISRDNAKTTLYLQMNSLRPEDTAVYYCTIGGSLSRSSQGTLVTVSS | N.A. | 13.154672 | 0 | 123 | 0 | 115 | 0 | 115 | 0 | 0 | alb8:vhh | N.A. | homo sapiens | N.A. | A | protein | serum albumin | homo sapiens | 37 | 13 | 0.57 | H_only | train |
8z95_A_B | 8z95 | humanized anti-peg h6.3 fab in complex with peg | no | immune system | 2024-04-22 | 2025-02-12 | x-ray diffraction | 2.26 | 0.261 | 0.209 | 39749925 | 10.1021/acsnano.4c05906 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV4 | A | B | QVQLVQSGSELKKPGASVKVSCKASGYTFTNYGMNWVRQAPGQGLEWMGWINTYTGQPIYANDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARDWGPYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNQMNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCLQYLSSWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGSELKKPGASVKVSCKASGYTFTNYGMNWVRQAPGQGLEWMGWINTYTGQPIYANDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARDWGPYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNQMNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCLQYLSSWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRG | 21.273397 | 23.88488 | 219 | 219 | 209 | 217 | 214 | 217 | 83 | heavy chain of anti-peg antibody h6-3 fab fragment | light chain of anti-peg antibody h6-3 fab fragment | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8z95_H_L | 8z95 | humanized anti-peg h6.3 fab in complex with peg | no | immune system | 2024-04-22 | 2025-02-12 | x-ray diffraction | 2.26 | 0.261 | 0.209 | 39749925 | 10.1021/acsnano.4c05906 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV4 | H | L | QVQLVQSGSELKKPGASVKVSCKASGYTFTNYGMNWVRQAPGQGLEWMGWINTYTGQPIYANDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARDWGPYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNQMNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCLQYLSSWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGSELKKPGASVKVSCKASGYTFTNYGMNWVRQAPGQGLEWMGWINTYTGQPIYANDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARDWGPYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNQMNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCLQYLSSWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNR | 22.761408 | 23.47081 | 219 | 219 | 212 | 216 | 215 | 216 | 97 | heavy chain of anti-peg antibody h6-3 fab fragment | light chain of anti-peg antibody h6-3 fab fragment | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8z8l_A | 8z8l | structure of il-4ra in complex with an nanobody 4e9 | yes | cytokine | 2024-04-22 | 2025-04-30 | x-ray diffraction | 3.96 | 0.334 | 0.301 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGDFYCMAWFRQAPGKEREAVAAIRSGGRSTYYADSVKGRFTISRDNSKNTLYLQMNSLKAEDTAVYYCAVGVDGNCRNYWGQGTLVTVSSESHHHHHHA | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGDFYCMAWFRQAPGKEREAVAAIRSGGRSTYYADSVKGRFTISRDNSKNTLYLQMNSLKAEDTAVYYCAVGVDGNCRNYWGQGTLVTVSS | N.A. | 13.168271 | 0 | 124 | 0 | 115 | 0 | 115 | 0 | 0 | nanobody dab1 | N.A. | vicugna pacos | N.A. | B | protein | interleukin-4 receptor subunit alpha | homo sapiens | 36 | 11 | 0.48 | H_only | train |
9bia_F | 9bia | cryo-em structure of ninj1 k45q bound to nb538 | yes | membrane protein | 2024-04-23 | 2024-10-16 | electron microscopy | 3 | N.A. | N.A. | 39476863 | 10.1038/s41586-024-08273-4 | 0 | auth_asym_id | VH | IGHV3 | N.A. | F | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSYYYVGWVRRAPGKGEELVARISPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCEVYIFGQYFESGQGTLVTVSSDKTHTGGSSGGSHHHHHHGS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSYYYVGWVRRAPGKGEELVARISPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCEVYIFGQYFESGQGTLVTV | N.A. | 13.818041 | 0 | 140 | 0 | 118 | 0 | 118 | 0 | 0 | nb538 | N.A. | synthetic construct | N.A. | A;C | protein;protein | ninjurin-1;ninjurin-1 | mus musculus;mus musculus | 16;24 | 5;7 | 0.62;0.58 | H_only | train |
9bia_E | 9bia | cryo-em structure of ninj1 k45q bound to nb538 | yes | membrane protein | 2024-04-23 | 2024-10-16 | electron microscopy | 3 | N.A. | N.A. | 39476863 | 10.1038/s41586-024-08273-4 | 0 | auth_asym_id | VH | IGHV3 | N.A. | E | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSYYYVGWVRRAPGKGEELVARISPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCEVYIFGQYFESGQGTLVTVSSDKTHTGGSSGGSHHHHHHGS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSYYYVGWVRRAPGKGEELVARISPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCEVYIFGQYFESGQGTLVTV | N.A. | 13.83342 | 0 | 140 | 0 | 118 | 0 | 118 | 0 | 0 | nb538 | N.A. | synthetic construct | N.A. | B;D | protein;protein | ninjurin-1;ninjurin-1 | mus musculus;mus musculus | 27;19 | 9;6 | 0.64;0.6 | H_only | train |
9bio_I_F | 9bio | structure of vrc44.01 fab in complex with 3bnc117-purified c1080.c3 rns sosip.664 hiv-1 env trimer | no | viral protein/immune system | 2024-04-23 | 2024-11-13 | electron microscopy | 2.83 | N.A. | N.A. | 39675002 | 10.1016/j.celrep.2024.115010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | I | F | QSYLVQSGPEVKKPGTAVKVSCQASRYPFTFFGISWVRQAPGKGPQWMGWISPYNGHAIYLDELKDRLTLTTDTDTTTAYMELRNLRSADTAVYFCARDHTRQDSRGYDFWGQGTLVTVSSAST | AIYLTQSPSSLSASVGERVTITCRASQDIGDTLAWYQQQPGRPPFLVVYRASTLNYGVPSRFSGGGSGTRFTLTISSLQPADSGTYFCQQFKTFPFTFGPGTKVEVK | QSYLVQSGPEVKKPGTAVKVSCQASRYPFTFFGISWVRQAPGKGPQWMGWISPYNGHAIYLDELKDRLTLTTDTDTTTAYMELRNLRSADTAVYFCARDHTRQDSRGYDFWGQGTLVTV | AIYLTQSPSSLSASVGERVTITCRASQDIGDTLAWYQQQPGRPPFLVVYRASTLNYGVPSRFSGGGSGTRFTLTISSLQPADSGTYFCQQFKTFPFTFGPGTKVEV | 14.042554 | 13.162367 | 124 | 107 | 119 | 106 | 119 | 106 | 35 | vrc44.01 heavy chain | vrc44.01 light chain | homo sapiens | homo sapiens | A | protein | envelope glycoprotein gp41 | human immunodeficiency virus 1 | 25 | 10 | 0.91 | HL | train |
9bio_H_L | 9bio | structure of vrc44.01 fab in complex with 3bnc117-purified c1080.c3 rns sosip.664 hiv-1 env trimer | no | viral protein/immune system | 2024-04-23 | 2024-11-13 | electron microscopy | 2.83 | N.A. | N.A. | 39675002 | 10.1016/j.celrep.2024.115010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | QSYLVQSGPEVKKPGTAVKVSCQASRYPFTFFGISWVRQAPGKGPQWMGWISPYNGHAIYLDELKDRLTLTTDTDTTTAYMELRNLRSADTAVYFCARDHTRQDSRGYDFWGQGTLVTVSSAST | AIYLTQSPSSLSASVGERVTITCRASQDIGDTLAWYQQQPGRPPFLVVYRASTLNYGVPSRFSGGGSGTRFTLTISSLQPADSGTYFCQQFKTFPFTFGPGTKVEVK | QSYLVQSGPEVKKPGTAVKVSCQASRYPFTFFGISWVRQAPGKGPQWMGWISPYNGHAIYLDELKDRLTLTTDTDTTTAYMELRNLRSADTAVYFCARDHTRQDSRGYDFWGQGTLVTV | AIYLTQSPSSLSASVGERVTITCRASQDIGDTLAWYQQQPGRPPFLVVYRASTLNYGVPSRFSGGGSGTRFTLTISSLQPADSGTYFCQQFKTFPFTFGPGTKVEV | 14.023214 | 13.171886 | 124 | 107 | 119 | 106 | 119 | 106 | 35 | vrc44.01 heavy chain | vrc44.01 light chain | homo sapiens | homo sapiens | B | protein | envelope glycoprotein gp41 | human immunodeficiency virus 1 | 24 | 10 | 0.91 | HL | train |
9bio_D_E | 9bio | structure of vrc44.01 fab in complex with 3bnc117-purified c1080.c3 rns sosip.664 hiv-1 env trimer | no | viral protein/immune system | 2024-04-23 | 2024-11-13 | electron microscopy | 2.83 | N.A. | N.A. | 39675002 | 10.1016/j.celrep.2024.115010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | D | E | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTV | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDL | 14.150394 | 12.977331 | 226 | 206 | 121 | 98 | 121 | 98 | 39 | 3bnc117 heavy chain | 3bnc117 light chain | homo sapiens | homo sapiens | C | protein | envelope glycoprotein gp160 | human immunodeficiency virus 1 | 63 | 15 | 0.56 | HL | train |
9bio_S_U | 9bio | structure of vrc44.01 fab in complex with 3bnc117-purified c1080.c3 rns sosip.664 hiv-1 env trimer | no | viral protein/immune system | 2024-04-23 | 2024-11-13 | electron microscopy | 2.83 | N.A. | N.A. | 39675002 | 10.1016/j.celrep.2024.115010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | S | U | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTV | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDL | 14.144793 | 12.970858 | 226 | 206 | 121 | 98 | 121 | 98 | 37 | 3bnc117 heavy chain | 3bnc117 light chain | homo sapiens | homo sapiens | G | protein | envelope glycoprotein gp160 | human immunodeficiency virus 1 | 60 | 14 | 0.54 | HL | train |
9bio_P_O | 9bio | structure of vrc44.01 fab in complex with 3bnc117-purified c1080.c3 rns sosip.664 hiv-1 env trimer | no | viral protein/immune system | 2024-04-23 | 2024-11-13 | electron microscopy | 2.83 | N.A. | N.A. | 39675002 | 10.1016/j.celrep.2024.115010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | P | O | QSYLVQSGPEVKKPGTAVKVSCQASRYPFTFFGISWVRQAPGKGPQWMGWISPYNGHAIYLDELKDRLTLTTDTDTTTAYMELRNLRSADTAVYFCARDHTRQDSRGYDFWGQGTLVTVSSAST | AIYLTQSPSSLSASVGERVTITCRASQDIGDTLAWYQQQPGRPPFLVVYRASTLNYGVPSRFSGGGSGTRFTLTISSLQPADSGTYFCQQFKTFPFTFGPGTKVEVK | QSYLVQSGPEVKKPGTAVKVSCQASRYPFTFFGISWVRQAPGKGPQWMGWISPYNGHAIYLDELKDRLTLTTDTDTTTAYMELRNLRSADTAVYFCARDHTRQDSRGYDFWGQGTLVTV | AIYLTQSPSSLSASVGERVTITCRASQDIGDTLAWYQQQPGRPPFLVVYRASTLNYGVPSRFSGGGSGTRFTLTISSLQPADSGTYFCQQFKTFPFTFGPGTKVEV | 13.98315 | 13.167465 | 124 | 107 | 119 | 106 | 119 | 106 | 37 | vrc44.01 heavy chain | vrc44.01 light chain | homo sapiens | homo sapiens | J | protein | envelope glycoprotein gp41 | human immunodeficiency virus 1 | 25 | 11 | 0.92 | HL | train |
9bio_M_N | 9bio | structure of vrc44.01 fab in complex with 3bnc117-purified c1080.c3 rns sosip.664 hiv-1 env trimer | no | viral protein/immune system | 2024-04-23 | 2024-11-13 | electron microscopy | 2.83 | N.A. | N.A. | 39675002 | 10.1016/j.celrep.2024.115010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | M | N | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTV | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDL | 14.153586 | 12.983458 | 226 | 206 | 121 | 98 | 121 | 98 | 36 | 3bnc117 heavy chain | 3bnc117 light chain | homo sapiens | homo sapiens | K | protein | envelope glycoprotein gp160 | human immunodeficiency virus 1 | 62 | 14 | 0.52 | HL | train |
8z9p_S | 8z9p | cryo-em structure of human gpr4-gi complex | yes | membrane protein | 2024-04-23 | 2025-07-09 | electron microscopy | 2.5 | N.A. | N.A. | 40215960 | 10.1016/j.molcel.2025.02.030 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGS | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.263937 | 0 | 250 | 0 | 234 | 0 | 247 | 0 | 0 | single fab chain (svfv16) | N.A. | synthetic construct | N.A. | C;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 34;23 | 19;9 | 0.86;0.75 | H_only | train |
8z9o_N | 8z9o | cryo-em structure of human gpr4-gs complex | yes | membrane protein/immune system | 2024-04-23 | 2025-07-16 | electron microscopy | 2.4 | N.A. | N.A. | 40215960 | 10.1016/j.molcel.2025.02.030 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.623405 | 0 | 126 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody-35 | N.A. | synthetic construct | N.A. | C;B | protein;protein | isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 47;32 | 15;11 | 0.65;0.69 | H_only | train |
9bir_B | 9bir | cryo-em structure of the mammalian peptide transporter pept2 bound to cefadroxil | no | membrane protein | 2024-04-24 | 2024-07-24 | electron microscopy | 3.1 | N.A. | N.A. | 39384780 | 10.1038/s41467-024-53096-6 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | GPSQVQLVESGGGLVQPGGSLRLLCVASGRPFNDYDMGWFRQAPGKEREFVASISWSGRVTDYSDSMKGRCTVSRDNAKGTMFLQMSNLVPRDTAVYYCAAARRRWTFKATNTEEFYETWGQGTQVTVSSA | N.A. | QLVESGGGLVQPGGSLRLLCVASGRPFNDYDMGWFRQAPGKEREFVASISWSGRVTDYSDSMKGRCTVSRDNAKGTMFLQMSNLVPRDTAVYYCAAARRRWTFKATNTEEFYETWGQGTQVTV | N.A. | 13.849103 | 0 | 131 | 0 | 123 | 0 | 123 | 0 | 0 | nanobody | N.A. | lama glama | N.A. | A | protein | solute carrier family 15 member 2 | rattus norvegicus | 33 | 17 | 0.85 | H_only | train |
9f34_E | 9f34 | cryo-em structure of dopamine 3 receptor:go complex bound to bitopic fob02-04a - conformation b | yes | membrane protein | 2024-04-24 | 2024-09-18 | electron microscopy | 3.09 | N.A. | N.A. | 39237617 | 10.1038/s41467-024-51993-4 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQGP | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.334932 | 0 | 259 | 0 | 231 | 0 | 246 | 0 | 0 | antibody scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 32;24 | 19;10 | 0.9;0.83 | H_only | train |
9bj3_C_D | 9bj3 | structure of the sars-cov-2 s 6p trimer complex with the human neutralizing antibody fab fragment, c1596 | yes | viral protein/immune system | 2024-04-24 | 2025-03-05 | electron microscopy | 3.04 | N.A. | N.A. | 40043139 | 10.1126/scitranslmed.adq5720 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | C | D | QVQLVQSGAEVKKPGSSVKVSCKASGGTFINYAVTWVRQAPGQGLEWMGGIIPILGIPNYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARVPQAGAAQGHYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | EIVLTQSPGTLSLSPGERATLSCRASQSVTSSYLAWYQQKPGQAPRLLIYGASSRVTGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGTFINYAVTWVRQAPGQGLEWMGGIIPILGIPNYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARVPQAGAAQGHYYYYYGMDVWGQGTTVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVTSSYLAWYQQKPGQAPRLLIYGASSRVTGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIK | 14.546721 | 13.499831 | 240 | 215 | 128 | 108 | 128 | 108 | 34 | c1596 fab heavy chain | c1596 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 73 | 20 | 0.54 | HL | train |
9bj3_E_F | 9bj3 | structure of the sars-cov-2 s 6p trimer complex with the human neutralizing antibody fab fragment, c1596 | yes | viral protein/immune system | 2024-04-24 | 2025-03-05 | electron microscopy | 3.04 | N.A. | N.A. | 40043139 | 10.1126/scitranslmed.adq5720 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | E | F | QVQLVQSGAEVKKPGSSVKVSCKASGGTFINYAVTWVRQAPGQGLEWMGGIIPILGIPNYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARVPQAGAAQGHYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | EIVLTQSPGTLSLSPGERATLSCRASQSVTSSYLAWYQQKPGQAPRLLIYGASSRVTGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGTFINYAVTWVRQAPGQGLEWMGGIIPILGIPNYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARVPQAGAAQGHYYYYYGMDVWGQGTTVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVTSSYLAWYQQKPGQAPRLLIYGASSRVTGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIK | 14.544757 | 13.4988 | 240 | 215 | 128 | 108 | 128 | 108 | 34 | c1596 fab heavy chain | c1596 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 75 | 20 | 0.54 | HL | train |
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