PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
6nf2_J_K
6nf2
cryo-em structure of vaccine-elicited antibody 0pv-c.01 in complex with hiv-1 env bg505 ds-sosip and antibodies vrc03 and pgt122
yes
immune system
2018-12-18
2019-07-24
electron microscopy
3.7
N.A.
N.A.
31348886
10.1016/j.cell.2019.06.030
0
auth_asym_id
VH:VL
IGHV4
IGLV3
J
K
QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
APTFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS
TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL
15.999232
13.508512
235
213
132
105
132
105
51
pgt122 heavy chain
pgt122 light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
33
14
0.93
HL
train
6nf2_N_M
6nf2
cryo-em structure of vaccine-elicited antibody 0pv-c.01 in complex with hiv-1 env bg505 ds-sosip and antibodies vrc03 and pgt122
yes
immune system
2018-12-18
2019-07-24
electron microscopy
3.7
N.A.
N.A.
31348886
10.1016/j.cell.2019.06.030
0
auth_asym_id
VH:VL
IGHV1
IGKV3
N
M
QVQLVQSGAVIKTPGSSVKISCRASGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVSYARQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCDYCGDFPWQYWGQGTVVVVSSASTKGPSVFPLAPSSKSTSSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
EIVLTQSPGILSLSPGETATLFCKASQGGNAMTWYQKRRGQVPRLLIYDTSRRASGVPDRFVGSGSGTDFFLTINKLDREDFAVYYCQQFEFFGLGSELEVHRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAVIKTPGSSVKISCRASGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVSYARQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCDYCGDFPWQYWGQGTVVVV
EIVLTQSPGILSLSPGETATLFCKASQGGNAMTWYQKRRGQVPRLLIYDTSRRASGVPDRFVGSGSGTDFFLTINKLDREDFAVYYCQQFEFFGLGSELEVH
14.706431
13.125952
235
209
128
102
128
102
39
vrc03 heavy chain
vrc03 light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
65
14
0.45
HL
train
6nf2_O_P
6nf2
cryo-em structure of vaccine-elicited antibody 0pv-c.01 in complex with hiv-1 env bg505 ds-sosip and antibodies vrc03 and pgt122
yes
immune system
2018-12-18
2019-07-24
electron microscopy
3.7
N.A.
N.A.
31348886
10.1016/j.cell.2019.06.030
0
auth_asym_id
VH:VL
IGHV4
IGKV2
O
P
QVQLVESGPGVVKPSETLSLTCVVSGGTPGRGFLYWSWVRQPPGKGLEWIGGTATNTDITDYNPSLKSRAAISKDTSRNQFLLNLKPLTAGDTAVYYCTSRAKDYRGPSYSRIDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIVMTQTPLSLPVTPGEPASISCRSSQSLLDSDGNTCLDWFLQKPGQSPQLLIYDVSNRVSGVPDRFSGSGSDTDFTLKISRVEAEDVGVYYCMQFVEFPLTFGGGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGPGVVKPSETLSLTCVVSGGTPGRGFLYWSWVRQPPGKGLEWIGGTATNTDITDYNPSLKSRAAISKDTSRNQFLLNLKPLTAGDTAVYYCTSRAKDYRGPSYSRIDVWGPGVLVTVS
DIVMTQTPLSLPVTPGEPASISCRSSQSLLDSDGNTCLDWFLQKPGQSPQLLIYDVSNRVSGVPDRFSGSGSDTDFTLKISRVEAEDVGVYYCMQFVEFPLTFGGGTKVEIR
14.994839
13.69699
229
219
125
112
125
112
40
0pv-c.01 heavy chain
0pv-c.01 light chain
homo sapiens
homo sapiens
A;I
protein;protein
envelope glycoprotein gp120;envelope glycoprotein gp41
human immunodeficiency virus 1;human immunodeficiency virus 1
25;46
10;24
0.71;0.89
HL
train
6nf2_C_D
6nf2
cryo-em structure of vaccine-elicited antibody 0pv-c.01 in complex with hiv-1 env bg505 ds-sosip and antibodies vrc03 and pgt122
yes
immune system
2018-12-18
2019-07-24
electron microscopy
3.7
N.A.
N.A.
31348886
10.1016/j.cell.2019.06.030
0
auth_asym_id
VH:VL
IGHV1
IGKV3
C
D
QVQLVQSGAVIKTPGSSVKISCRASGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVSYARQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCDYCGDFPWQYWGQGTVVVVSSASTKGPSVFPLAPSSKSTSSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
EIVLTQSPGILSLSPGETATLFCKASQGGNAMTWYQKRRGQVPRLLIYDTSRRASGVPDRFVGSGSGTDFFLTINKLDREDFAVYYCQQFEFFGLGSELEVHRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAVIKTPGSSVKISCRASGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVSYARQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCDYCGDFPWQYWGQGTVVVV
EIVLTQSPGILSLSPGETATLFCKASQGGNAMTWYQKRRGQVPRLLIYDTSRRASGVPDRFVGSGSGTDFFLTINKLDREDFAVYYCQQFEFFGLGSELEVH
14.706484
13.126062
235
209
128
102
128
102
39
vrc03 heavy chain
vrc03 light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
68
15
0.47
HL
train
6nf2_E_F
6nf2
cryo-em structure of vaccine-elicited antibody 0pv-c.01 in complex with hiv-1 env bg505 ds-sosip and antibodies vrc03 and pgt122
yes
immune system
2018-12-18
2019-07-24
electron microscopy
3.7
N.A.
N.A.
31348886
10.1016/j.cell.2019.06.030
0
auth_asym_id
VH:VL
IGHV4
IGLV3
E
F
QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
APTFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS
TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL
15.999251
13.508494
235
213
132
105
132
105
52
pgt122 heavy chain
pgt122 light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
33
14
0.93
HL
train
6nf2_H_L
6nf2
cryo-em structure of vaccine-elicited antibody 0pv-c.01 in complex with hiv-1 env bg505 ds-sosip and antibodies vrc03 and pgt122
yes
immune system
2018-12-18
2019-07-24
electron microscopy
3.7
N.A.
N.A.
31348886
10.1016/j.cell.2019.06.030
0
auth_asym_id
VH:VL
IGHV4
IGKV2
H
L
QVQLVESGPGVVKPSETLSLTCVVSGGTPGRGFLYWSWVRQPPGKGLEWIGGTATNTDITDYNPSLKSRAAISKDTSRNQFLLNLKPLTAGDTAVYYCTSRAKDYRGPSYSRIDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIVMTQTPLSLPVTPGEPASISCRSSQSLLDSDGNTCLDWFLQKPGQSPQLLIYDVSNRVSGVPDRFSGSGSDTDFTLKISRVEAEDVGVYYCMQFVEFPLTFGGGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGPGVVKPSETLSLTCVVSGGTPGRGFLYWSWVRQPPGKGLEWIGGTATNTDITDYNPSLKSRAAISKDTSRNQFLLNLKPLTAGDTAVYYCTSRAKDYRGPSYSRIDVWGPGVLVTVS
DIVMTQTPLSLPVTPGEPASISCRSSQSLLDSDGNTCLDWFLQKPGQSPQLLIYDVSNRVSGVPDRFSGSGSDTDFTLKISRVEAEDVGVYYCMQFVEFPLTFGGGTKVEIR
14.994838
13.697005
229
219
125
112
125
112
37
0pv-c.01 heavy chain
0pv-c.01 light chain
homo sapiens
homo sapiens
G;B
protein;protein
envelope glycoprotein gp120;envelope glycoprotein gp41
human immunodeficiency virus 1;human immunodeficiency virus 1
25;45
9;24
0.69;0.89
HL
train
6nf2_S_T
6nf2
cryo-em structure of vaccine-elicited antibody 0pv-c.01 in complex with hiv-1 env bg505 ds-sosip and antibodies vrc03 and pgt122
yes
immune system
2018-12-18
2019-07-24
electron microscopy
3.7
N.A.
N.A.
31348886
10.1016/j.cell.2019.06.030
0
auth_asym_id
VH:VL
IGHV4
IGLV3
S
T
QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
APTFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
QVHLQESGPGLVKPSETLSLTCNVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSS
TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL
15.999299
13.50854
235
213
132
105
132
105
51
pgt122 heavy chain
pgt122 light chain
homo sapiens
homo sapiens
Q
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
33
14
0.93
HL
train
6nf2_V_U
6nf2
cryo-em structure of vaccine-elicited antibody 0pv-c.01 in complex with hiv-1 env bg505 ds-sosip and antibodies vrc03 and pgt122
yes
immune system
2018-12-18
2019-07-24
electron microscopy
3.7
N.A.
N.A.
31348886
10.1016/j.cell.2019.06.030
0
auth_asym_id
VH:VL
IGHV1
IGKV3
V
U
QVQLVQSGAVIKTPGSSVKISCRASGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVSYARQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCDYCGDFPWQYWGQGTVVVVSSASTKGPSVFPLAPSSKSTSSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
EIVLTQSPGILSLSPGETATLFCKASQGGNAMTWYQKRRGQVPRLLIYDTSRRASGVPDRFVGSGSGTDFFLTINKLDREDFAVYYCQQFEFFGLGSELEVHRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAVIKTPGSSVKISCRASGYNFRDYSIHWVRLIPDKGFEWIGWIKPLWGAVSYARQLQGRVSMTRQLSQDPDDPDWGVAYMEFSGLTPADTAEYFCVRRGSCDYCGDFPWQYWGQGTVVVV
EIVLTQSPGILSLSPGETATLFCKASQGGNAMTWYQKRRGQVPRLLIYDTSRRASGVPDRFVGSGSGTDFFLTINKLDREDFAVYYCQQFEFFGLGSELEVH
14.70653
13.12597
235
209
128
102
128
102
39
vrc03 heavy chain
vrc03 light chain
homo sapiens
homo sapiens
Q
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
67
14
0.45
HL
train
6nf2_W_X
6nf2
cryo-em structure of vaccine-elicited antibody 0pv-c.01 in complex with hiv-1 env bg505 ds-sosip and antibodies vrc03 and pgt122
yes
immune system
2018-12-18
2019-07-24
electron microscopy
3.7
N.A.
N.A.
31348886
10.1016/j.cell.2019.06.030
0
auth_asym_id
VH:VL
IGHV4
IGKV2
W
X
QVQLVESGPGVVKPSETLSLTCVVSGGTPGRGFLYWSWVRQPPGKGLEWIGGTATNTDITDYNPSLKSRAAISKDTSRNQFLLNLKPLTAGDTAVYYCTSRAKDYRGPSYSRIDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIVMTQTPLSLPVTPGEPASISCRSSQSLLDSDGNTCLDWFLQKPGQSPQLLIYDVSNRVSGVPDRFSGSGSDTDFTLKISRVEAEDVGVYYCMQFVEFPLTFGGGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGPGVVKPSETLSLTCVVSGGTPGRGFLYWSWVRQPPGKGLEWIGGTATNTDITDYNPSLKSRAAISKDTSRNQFLLNLKPLTAGDTAVYYCTSRAKDYRGPSYSRIDVWGPGVLVTVS
DIVMTQTPLSLPVTPGEPASISCRSSQSLLDSDGNTCLDWFLQKPGQSPQLLIYDVSNRVSGVPDRFSGSGSDTDFTLKISRVEAEDVGVYYCMQFVEFPLTFGGGTKVEIR
14.994857
13.697022
229
219
125
112
125
112
38
0pv-c.01 heavy chain
0pv-c.01 light chain
homo sapiens
homo sapiens
Q;R
protein;protein
envelope glycoprotein gp120;envelope glycoprotein gp41
human immunodeficiency virus 1;human immunodeficiency virus 1
24;45
9;24
0.69;0.89
HL
train
6nf5_H_L
6nf5
bg505 md64 n332-gt5 sosip trimer in complex with bg18-like precursor hmp1 fragmentantigen binding and base-binding rm20a3 fragment antigen binding
no
viral protein/immune system
2018-12-18
2019-11-06
electron microscopy
3.71
N.A.
N.A.
31672916
10.1126/science.aax4380
0
auth_asym_id
VH:VL
IGHV4
IGLV3
H
L
QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREGFTIFGVVTFSEGYYYGMDVWGKGTTVTVSS
SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGEVFGGGTKLTVL
VQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREGFTIFGVVTFSEGYYYGMDVWGKGTTVTV
ELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGEVFGGGTKLTV
14.805676
12.472179
131
106
128
99
128
103
37
bg18-like precursor hmp1 fragment antigen binding heavy chain
bg18-like precursor hmp1 fragment antigen binding light chain
homo sapiens
homo sapiens
A
protein
hiv-1 env bg505 md64 n332-gt5 sosip gp120
human immunodeficiency virus 1
37
18
0.95
HL
train
6nf5_G_I
6nf5
bg505 md64 n332-gt5 sosip trimer in complex with bg18-like precursor hmp1 fragmentantigen binding and base-binding rm20a3 fragment antigen binding
no
viral protein/immune system
2018-12-18
2019-11-06
electron microscopy
3.71
N.A.
N.A.
31672916
10.1126/science.aax4380
0
auth_asym_id
VH:VL
IGHV3
IGLV2
G
I
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTV
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTV
13.739112
13.327084
125
128
123
108
123
108
38
base-binding rm20a3 fragment antigen binding heavy chain
base-binding rm20a3 fragment antigen binding light chain
macaca mulatta
macaca mulatta
A;D
protein;protein
hiv-1 env bg505 md64 n332-gt5 sosip gp120;hiv-1 env bg505 md64 n332-gt5 sosip gp41
human immunodeficiency virus 1;human immunodeficiency virus 1
14;27
8;18
1.0;0.95
HL
train
6nf5_E_F
6nf5
bg505 md64 n332-gt5 sosip trimer in complex with bg18-like precursor hmp1 fragmentantigen binding and base-binding rm20a3 fragment antigen binding
no
viral protein/immune system
2018-12-18
2019-11-06
electron microscopy
3.71
N.A.
N.A.
31672916
10.1126/science.aax4380
0
auth_asym_id
VH:VL
IGHV4
IGLV3
E
F
QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREGFTIFGVVTFSEGYYYGMDVWGKGTTVTVSS
SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGEVFGGGTKLTVL
VQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREGFTIFGVVTFSEGYYYGMDVWGKGTTVTV
ELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGEVFGGGTKLTV
14.805672
12.47218
131
106
128
99
128
103
37
bg18-like precursor hmp1 fragment antigen binding heavy chain
bg18-like precursor hmp1 fragment antigen binding light chain
homo sapiens
homo sapiens
C
protein
hiv-1 env bg505 md64 n332-gt5 sosip gp120
human immunodeficiency virus 1
37
18
0.95
HL
train
6nf5_Q_R
6nf5
bg505 md64 n332-gt5 sosip trimer in complex with bg18-like precursor hmp1 fragmentantigen binding and base-binding rm20a3 fragment antigen binding
no
viral protein/immune system
2018-12-18
2019-11-06
electron microscopy
3.71
N.A.
N.A.
31672916
10.1126/science.aax4380
0
auth_asym_id
VH:VL
IGHV3
IGLV2
Q
R
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTV
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTV
13.739112
13.327046
125
128
123
108
123
108
38
base-binding rm20a3 fragment antigen binding heavy chain
base-binding rm20a3 fragment antigen binding light chain
macaca mulatta
macaca mulatta
C;M
protein;protein
hiv-1 env bg505 md64 n332-gt5 sosip gp120;hiv-1 env bg505 md64 n332-gt5 sosip gp41
human immunodeficiency virus 1;human immunodeficiency virus 1
14;27
8;18
1.0;0.95
HL
train
6nf5_O_P
6nf5
bg505 md64 n332-gt5 sosip trimer in complex with bg18-like precursor hmp1 fragmentantigen binding and base-binding rm20a3 fragment antigen binding
no
viral protein/immune system
2018-12-18
2019-11-06
electron microscopy
3.71
N.A.
N.A.
31672916
10.1126/science.aax4380
0
auth_asym_id
VH:VL
IGHV4
IGLV3
O
P
QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREGFTIFGVVTFSEGYYYGMDVWGKGTTVTVSS
SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGEVFGGGTKLTVL
VQLQESGPGLVKPSQTLSLTCTVSGGSISSGSYYWSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAREGFTIFGVVTFSEGYYYGMDVWGKGTTVTV
ELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGEVFGGGTKLTV
14.805688
12.472181
131
106
128
99
128
103
37
bg18-like precursor hmp1 fragment antigen binding heavy chain
bg18-like precursor hmp1 fragment antigen binding light chain
homo sapiens
homo sapiens
J
protein
hiv-1 env bg505 md64 n332-gt5 sosip gp120
human immunodeficiency virus 1
37
18
0.95
HL
train
6nf5_K_N
6nf5
bg505 md64 n332-gt5 sosip trimer in complex with bg18-like precursor hmp1 fragmentantigen binding and base-binding rm20a3 fragment antigen binding
no
viral protein/immune system
2018-12-18
2019-11-06
electron microscopy
3.71
N.A.
N.A.
31672916
10.1126/science.aax4380
0
auth_asym_id
VH:VL
IGHV3
IGLV2
K
N
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTV
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTV
13.739108
13.327042
125
128
123
108
123
108
38
base-binding rm20a3 fragment antigen binding heavy chain
base-binding rm20a3 fragment antigen binding light chain
macaca mulatta
macaca mulatta
J;B
protein;protein
hiv-1 env bg505 md64 n332-gt5 sosip gp120;hiv-1 env bg505 md64 n332-gt5 sosip gp41
human immunodeficiency virus 1;human immunodeficiency virus 1
14;27
8;18
1.0;0.95
HL
train
6nex_B_A
6nex
fab fragment of anti-cocaine antibody h2e2
no
immune system
2018-12-18
2019-11-20
x-ray diffraction
2.15
0.254
0.214
31702583
10.1107/S2053230X19013608
0
auth_asym_id
FabH:FabL
IGHV3
IGLV7
B
A
EVQLVESGGGLVQPGGSLRLSCAASGFIFSSDWMNWVRQAPGKGLEWVANINQDGSEKYYVDSVKGRFTISRDNAQNSLYLQMNSLRAEDTAVYYCAKELGPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
QAVVIQESALTTSPGGTVILTCRSSTGTITTSNYANWVQKKPNHVFTGLIGATSIRAPGVPVRFSGFLIGGKAALTITGAQTEDDAMYFCALWYNTHYVFGGGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGGGLVQPGGSLRLSCAASGFIFSSDWMNWVRQAPGKGLEWVANINQDGSEKYYVDSVKGRFTISRDNAQNSLYLQMNSLRAEDTAVYYCAKELGPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
AVVIQESALTTSPGGTVILTCRSSTGTITTSNYANWVQKKPNHVFTGLIGATSIRAPGVPVRFSGFLIGGKAALTITGAQTEDDAMYFCALWYNTHYVFGGGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE
20.889694
23.724909
218
215
211
207
213
212
90
ighg protein
anitgen binding fragment light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
6nex_H_L
6nex
fab fragment of anti-cocaine antibody h2e2
no
immune system
2018-12-18
2019-11-20
x-ray diffraction
2.15
0.254
0.214
31702583
10.1107/S2053230X19013608
0
auth_asym_id
FabH:FabL
IGHV3
IGLV7
H
L
EVQLVESGGGLVQPGGSLRLSCAASGFIFSSDWMNWVRQAPGKGLEWVANINQDGSEKYYVDSVKGRFTISRDNAQNSLYLQMNSLRAEDTAVYYCAKELGPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
QAVVIQESALTTSPGGTVILTCRSSTGTITTSNYANWVQKKPNHVFTGLIGATSIRAPGVPVRFSGFLIGGKAALTITGAQTEDDAMYFCALWYNTHYVFGGGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGGGLVQPGGSLRLSCAASGFIFSSDWMNWVRQAPGKGLEWVANINQDGSEKYYVDSVKGRFTISRDNAQNSLYLQMNSLRAEDTAVYYCAKELGPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
AVVIQESALTTSPGGTVILTCRSSTGTITTSNYANWVQKKPNHVFTGLIGATSIRAPGVPVRFSGFLIGGKAALTITGAQTEDDAMYFCALWYNTHYVFGGGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
21.322372
23.770082
218
215
209
205
213
211
86
antigen binding fragment heavy chain
anitgen binding fragment light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
6nfc_H_L
6nfc
bg505 md64 n332-gt5 sosip trimer in complex with bg18-like precursor hmp42 fragmentantigen binding and base-binding rm20a3 fragment antigen binding
no
viral protein
2018-12-19
2019-11-06
electron microscopy
3.43
N.A.
N.A.
31672916
10.1126/science.aax4380
0
auth_asym_id
VH:VL
IGHV1
IGLV3
H
L
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDRGREWELESYYYYYYMDVWGKGTTVTVSS
SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYVVFGGGTKLTVL
VQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDRGREWELESYYYYYYMDVWGKGTTVTVS
ELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTYVVFGGGTKLTVL
14.855573
13.09277
128
108
126
106
126
106
43
bg18-like precursor hmp42 fragment antigen binding heavy chain
bg18-like precursor hmp42 fragment antigen binding light chain
homo sapiens
homo sapiens
A
protein
hiv-1 env bg505 md64 n332-gt5 sosip gp120
human immunodeficiency virus 1
25
11
0.85
HL
train
6nfc_K_N
6nfc
bg505 md64 n332-gt5 sosip trimer in complex with bg18-like precursor hmp42 fragmentantigen binding and base-binding rm20a3 fragment antigen binding
no
viral protein
2018-12-19
2019-11-06
electron microscopy
3.43
N.A.
N.A.
31672916
10.1126/science.aax4380
0
auth_asym_id
VH:VL
IGHV3
IGLV2
K
N
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTV
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVL
13.812509
13.507012
125
128
123
109
123
109
41
base-binding rm20a3 fragment antigen binding heavy chain
base-binding rm20a3 fragment antigen binding light chain
macaca mulatta
macaca mulatta
B
protein
hiv-1 env bg505 md64 n332-gt5 sosip gp41
human immunodeficiency virus 1
26
17
0.94
HL
train
6nfc_J_M
6nfc
bg505 md64 n332-gt5 sosip trimer in complex with bg18-like precursor hmp42 fragmentantigen binding and base-binding rm20a3 fragment antigen binding
no
viral protein
2018-12-19
2019-11-06
electron microscopy
3.43
N.A.
N.A.
31672916
10.1126/science.aax4380
0
auth_asym_id
VH:VL
IGHV3
IGLV2
J
M
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTV
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVL
13.8091
13.497646
125
128
123
109
123
109
40
base-binding rm20a3 fragment antigen binding heavy chain
base-binding rm20a3 fragment antigen binding light chain
macaca mulatta
macaca mulatta
G
protein
hiv-1 env bg505 md64 n332-gt5 sosip gp41
human immunodeficiency virus 1
25
16
0.94
HL
train
6nfc_C_D
6nfc
bg505 md64 n332-gt5 sosip trimer in complex with bg18-like precursor hmp42 fragmentantigen binding and base-binding rm20a3 fragment antigen binding
no
viral protein
2018-12-19
2019-11-06
electron microscopy
3.43
N.A.
N.A.
31672916
10.1126/science.aax4380
0
auth_asym_id
VH:VL
IGHV3
IGLV2
C
D
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTV
ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVL
13.787575
13.507092
125
128
123
109
123
109
42
base-binding rm20a3 fragment antigen binding heavy chain
base-binding rm20a3 fragment antigen binding light chain
macaca mulatta
macaca mulatta
G;I
protein;protein
hiv-1 env bg505 md64 n332-gt5 sosip gp41;hiv-1 env bg505 md64 n332-gt5 sosip gp41
human immunodeficiency virus 1;human immunodeficiency virus 1
11;26
5;17
1.0;0.94
HL
train
6nfj_B
6nfj
structure of beta-klotho in complex with fgf19 c-terminal peptide
yes
signaling protein
2018-12-20
2019-04-03
x-ray diffraction
3.19
0.32
0.28
30944224
10.1073/pnas.1822055116
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGRAIRSYFMAWFRQAPGKEREFVAAVEYIFNTYYADSVKGRFTISRDNAKNTVFLQMNSLKPEDTAVYYCAAGVGASVSVSESWYNYWGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGRAIRSYFMAWFRQAPGKEREFVAAVEYIFNTYYADSVKGRFTISRDNAKNTVFLQMNSLKPEDTAVYYCAAGVGASVSVSESWYNYWGQGTQVTV
N.A.
13.358845
0
133
0
111
0
121
0
0
nanobody 30
N.A.
lama glama
N.A.
A
protein
beta-klotho
homo sapiens
41
13
0.65
H_only
train
6nfj_E
6nfj
structure of beta-klotho in complex with fgf19 c-terminal peptide
yes
signaling protein
2018-12-20
2019-04-03
x-ray diffraction
3.19
0.32
0.28
30944224
10.1073/pnas.1822055116
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGRAIRSYFMAWFRQAPGKEREFVAAVEYIFNTYYADSVKGRFTISRDNAKNTVFLQMNSLKPEDTAVYYCAAGVGASVSVSESWYNYWGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGRAIRSYFMAWFRQAPGKEREFVAAVEYIFNTYYADSVKGRFTISRDNAKNTVFLQMNSLKPEDTAVYYCAAGVGASVSVSESWYNYWGQGTQVTV
N.A.
13.361316
0
133
0
113
0
121
0
0
nanobody 30
N.A.
lama glama
N.A.
D
protein
beta-klotho
homo sapiens
49
15
0.62
H_only
train
6nfu_A_B
6nfu
structure of the kcsa-g77a mutant or the 2,4-ion bound configuration of a k+ channel selectivity filter.
yes
membrane protein, metal transport
2018-12-20
2019-08-07
x-ray diffraction
2.09
0.224
0.21
31387976
10.1073/pnas.1901888116
0
auth_asym_id
FabH:FabL
IGHV1
IGKV6
A
B
QVQLQQPGAELVKPGASVKLSCKASGYTFTSDWIHWVKQRPGHGLEWIGEIIPSYGRANYNEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERGDGYFAVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRD
DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
QVQLQQPGAELVKPGASVKLSCKASGYTFTSDWIHWVKQRPGHGLEWIGEIIPSYGRANYNEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERGDGYFAVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRD
DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
21.01146
23.380476
219
212
219
212
219
212
100
antibody fragment heavy chain
antibody fragment light chain
mus musculus
mus musculus
C
protein
ph-gated potassium channel kcsa
streptomyces lividans
38
18
0.86
HL
train
6qb3_X
6qb3
apo mcl1 in a complex with a scfv
no
apoptosis
2018-12-20
2019-11-06
x-ray diffraction
1.9
0.205
0.172
31692474
10.1107/S2059798319014116
0
auth_asym_id
scFv
N.A.
N.A.
X
N.A.
QVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVLGAAAENLYFQ
N.A.
QVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVL
N.A.
17.094246
0
255
0
228
0
245
0
0
scfv55
N.A.
homo sapiens
N.A.
A
protein
induced myeloid leukemia cell differentiation protein mcl-1
homo sapiens
31
16
0.84
H_only
train
6qb4_X
6qb4
mcl1-scfv complex with an indole acid inhibitor
no
apoptosis
2018-12-20
2019-11-06
x-ray diffraction
2.38
0.231
0.197
31692474
10.1107/S2059798319014116
0
auth_asym_id
scFv
N.A.
N.A.
X
N.A.
QVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVLGAAAENLYFQ
N.A.
QVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVLGAA
N.A.
17.504517
0
255
0
231
0
248
0
0
scfv55
N.A.
homo sapiens
N.A.
A
protein
induced myeloid leukemia cell differentiation protein mcl-1
homo sapiens
31
16
0.84
H_only
train
6qb6_H_L
6qb6
mcl1 in complex with a fab
no
apoptosis
2018-12-20
2019-11-06
x-ray diffraction
2.24
0.232
0.187
31692474
10.1107/S2059798319014116
0
auth_asym_id
FabH:FabL
IGHV3
IGLV1
H
L
QVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDCAAAENLYFQ
QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVLGESEGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSRADCS
QVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVLGESEGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSRAD
23.568161
20.7508
230
220
210
213
218
217
104
fab heavy chain
fab light chain
homo sapiens
homo sapiens
A
protein
induced myeloid leukemia cell differentiation protein mcl-1
homo sapiens
34
19
0.95
HL
train
6nha_H_L
6nha
crystal structure of synt001, a human fcrn blocking monoclonal antibody
yes
immune system
2018-12-21
2019-12-25
x-ray diffraction
2.38
0.245
0.19
31897428
10.1126/sciadv.aax9586
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
QVQLVQSGAELKKPGASVKLSCKASGYTFTSYGISWVKQATGQGLEWIGEIYPRSGNTYYNEKFKGRATLTADKSTSTAYMELRSLRSEDSAVYFCARSTTVRPPGIWGTGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKY
DIQMTQSPSSLSASVGDRVTITCKASDHINNWLAWYQQKPGQAPRLLISGATSLETGVPSRFSGSGTGKDYTLTISSLQPEDFATYYCQQYWSTPYTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAELKKPGASVKLSCKASGYTFTSYGISWVKQATGQGLEWIGEIYPRSGNTYYNEKFKGRATLTADKSTSTAYMELRSLRSEDSAVYFCARSTTVRPPGIWGTGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVE
DIQMTQSPSSLSASVGDRVTITCKASDHINNWLAWYQQKPGQAPRLLISGATSLETGVPSRFSGSGTGKDYTLTISSLQPEDFATYYCQQYWSTPYTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.625505
23.394363
220
214
211
212
217
212
95
synt001-fab heavy chain
synt001-fab light chain
homo sapiens
homo sapiens
A;B
protein;protein
igg receptor fcrn large subunit p51;beta-2-microglobulin
homo sapiens;homo sapiens
33;17
15;9
0.79;0.9
HL
train
6j11_H_L
6j11
mers-cov spike n-terminal domain and 7d10 scfv complex
no
viral protein
2018-12-27
2019-07-24
x-ray diffraction
3
0.225
0.188
31296843
10.1038/s41467-019-10897-4
0
auth_asym_id
VH:VL
IGHV1
IGKV7
H
L
GGGSGGGSGGGSEVQLVESGAEVVKPGASVKMSCKASGYPFTSYNIHWIKQTPGQGLEWIGAIYPGNGDTSYTQKFKVKATLTSDKSSSTAYMQLSSLTSEDSAVYFCARYGNYPSYAMDYWGQGTSVTVSS
DIVMTQSPASLTVSLGQRATISCRASKSVSASGYNYLHWYQQRPGQPPKLLIYLAFNLESGVPARFNGSGSGTDFTLNIHPVEEEDAATYYCQHSRDLPFTFGSGTKLEIK
GGGSGGGSEVQLVESGAEVVKPGASVKMSCKASGYPFTSYNIHWIKQTPGQGLEWIGAIYPGNGDTSYTQKFKVKATLTSDKSSSTAYMQLSSLTSEDSAVYFCARYGNYPSYAMDYWGQGTSVTVSS
DIVMTQSPASLTVSLGQRATISCRASKSVSASGYNYLHWYQQRPGQPPKLLIYLAFNLESGVPARFNGSGSGTDFTLNIHPVEEEDAATYYCQHSRDLPFTFGSGTKLEIK
14.36278
13.512793
132
111
128
111
128
111
50
vh of 7d10
vl of 7d10
mus musculus
mus musculus
A
protein
n-terminal domain of spike glycoprotein
middle east respiratory syndrome-related coronavirus
48
18
0.78
HL
train
6j11_F_G
6j11
mers-cov spike n-terminal domain and 7d10 scfv complex
no
viral protein
2018-12-27
2019-07-24
x-ray diffraction
3
0.225
0.188
31296843
10.1038/s41467-019-10897-4
0
auth_asym_id
VH:VL
IGHV1
IGKV7
F
G
GGGSGGGSGGGSEVQLVESGAEVVKPGASVKMSCKASGYPFTSYNIHWIKQTPGQGLEWIGAIYPGNGDTSYTQKFKVKATLTSDKSSSTAYMQLSSLTSEDSAVYFCARYGNYPSYAMDYWGQGTSVTVSS
DIVMTQSPASLTVSLGQRATISCRASKSVSASGYNYLHWYQQRPGQPPKLLIYLAFNLESGVPARFNGSGSGTDFTLNIHPVEEEDAATYYCQHSRDLPFTFGSGTKLEIK
EVQLVESGAEVVKPGASVKMSCKASGYPFTSYNIHWIKQTPGQGLEWIGAIYPGNGDTSYTQKFKVKATLTSDKSSSTAYMQLSSLTSEDSAVYFCARYGNYPSYAMDYWGQGTSVTVSS
DIVMTQSPASLTVSLGQRATISCRASKSVSASGYNYLHWYQQRPGQPPKLLIYLAFNLESGVPARFNGSGSGTDFTLNIHPVEEEDAATYYCQHSRDLPFTFGSGTKLEIK
14.018272
13.512066
132
111
120
111
120
111
45
vh of 7d10
vl of 7d10
mus musculus
mus musculus
B
protein
n-terminal domain of spike glycoprotein
middle east respiratory syndrome-related coronavirus
48
18
0.72
HL
train
6j11_D_E
6j11
mers-cov spike n-terminal domain and 7d10 scfv complex
no
viral protein
2018-12-27
2019-07-24
x-ray diffraction
3
0.225
0.188
31296843
10.1038/s41467-019-10897-4
0
auth_asym_id
VH:VL
IGHV1
IGKV7
D
E
GGGSGGGSGGGSEVQLVESGAEVVKPGASVKMSCKASGYPFTSYNIHWIKQTPGQGLEWIGAIYPGNGDTSYTQKFKVKATLTSDKSSSTAYMQLSSLTSEDSAVYFCARYGNYPSYAMDYWGQGTSVTVSS
DIVMTQSPASLTVSLGQRATISCRASKSVSASGYNYLHWYQQRPGQPPKLLIYLAFNLESGVPARFNGSGSGTDFTLNIHPVEEEDAATYYCQHSRDLPFTFGSGTKLEIK
EVQLVESGAEVVKPGASVKMSCKASGYPFTSYNIHWIKQTPGQGLEWIGAIYPGNGDTSYTQKFKVKATLTSDKSSSTAYMQLSSLTSEDSAVYFCARYGNYPSYAMDYWGQGTSVTVSS
DIVMTQSPASLTVSLGQRATISCRASKSVSASGYNYLHWYQQRPGQPPKLLIYLAFNLESGVPARFNGSGSGTDFTLNIHPVEEEDAATYYCQHSRDLPFTFGSGTKLEIK
14.037767
13.514593
132
111
120
111
120
111
45
vh of 7d10
vl of 7d10
mus musculus
mus musculus
C
protein
n-terminal domain of spike glycoprotein
middle east respiratory syndrome-related coronavirus
44
18
0.78
HL
train
6j14_A_B
6j14
complex structure of gy-14 and pd-1
no
immune system
2018-12-27
2019-11-06
x-ray diffraction
1.4
0.215
0.188
30952089
10.1016/j.isci.2019.03.017
0
auth_asym_id
VH:VL
IGHV1
IGKV2
A
B
QVQLQQSGAELVRPGASVKLSCKALGDTFTDYEIHWVKQTPVHGLEWIGVIHPGSGGTVYNQKFKGKATLTADKYSSTAYMELSSLTSEDSAVYYCTREGMNTDWYFDVWGAGTTVTVSS
DILMTQDELSLPVSLGDQASISCRSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTYFTLKISRLEAEDLGVYYCFQGSHVPYTFGGGTKLEMK
QLQQSGAELVRPGASVKLSCKALGDTFTDYEIHWVKQTPVHGLEWIGVIHPGSGGTVYNQKFKGKATLTADKYSSTAYMELSSLTSEDSAVYYCTREGMNTDWYFDVWGAGTTVTVS
DILMTQDELSLPVSLGDQASISCRSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTYFTLKISRLEAEDLGVYYCFQGSHVPYTFGGGTKLEMK
13.581967
13.525428
120
112
113
112
117
112
41
gy-14 heavy chain v fragment
gy-14 light chain v fragment
mus musculus
mus musculus
G
protein
programmed cell death protein 1
homo sapiens
40
20
0.77
HL
train
6j15_A_B
6j15
complex structure of gy-5 fab and pd-1
no
immune system
2018-12-27
2019-11-06
x-ray diffraction
2.6
0.277
0.212
30952089
10.1016/j.isci.2019.03.017
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
A
B
QVQLQQSGPELVRPGVSVKISCKGSGHTFTDYALHWVRQSHVKSLEWIGVISSYNGITNYNQRFKGKATMTVDKSSSTAYLELARLTSEDSAIYYCSREEWDVFYYFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIET
DIMLTQSPLSLPVSLGDQASISCRSSQGIVHSDGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFILKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKNFNR
LQQSGPELVRPGVSVKISCKGSGHTFTDYALHWVRQSHVKSLEWIGVISSYNGITNYNQRFKGKATMTVDKSSSTAYLELARLTSEDSAIYYCSREEWDVFYYFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIET
DIMLTQSPLSLPVSLGDQASISCRSSQGIVHSDGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFILKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKNFNR
22.766201
22.90723
219
216
205
216
216
216
98
gy-5 heavy chain fab
gy-5 light chain fab
mus musculus
mus musculus
C
protein
programmed cell death protein 1
homo sapiens
48
23
0.79
HL
train
6j15_H_L
6j15
complex structure of gy-5 fab and pd-1
no
immune system
2018-12-27
2019-11-06
x-ray diffraction
2.6
0.277
0.212
30952089
10.1016/j.isci.2019.03.017
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
H
L
QVQLQQSGPELVRPGVSVKISCKGSGHTFTDYALHWVRQSHVKSLEWIGVISSYNGITNYNQRFKGKATMTVDKSSSTAYLELARLTSEDSAIYYCSREEWDVFYYFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIET
DIMLTQSPLSLPVSLGDQASISCRSSQGIVHSDGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFILKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKNFNR
LQQSGPELVRPGVSVKISCKGSGHTFTDYALHWVRQSHVKSLEWIGVISSYNGITNYNQRFKGKATMTVDKSSSTAYLELARLTSEDSAIYYCSREEWDVFYYFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIET
DIMLTQSPLSLPVSLGDQASISCRSSQGIVHSDGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFILKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKNFNR
22.628881
22.948353
219
216
203
216
216
216
102
gy-5 heavy chain fab
gy-5 light chain fab
mus musculus
mus musculus
D
protein
programmed cell death protein 1
homo sapiens
45
22
0.79
HL
train
6nij_H_L
6nij
pgt145 fab in complex with full length amc011 hiv-1 env
no
immune system
2018-12-29
2019-07-31
electron microscopy
5.7
N.A.
N.A.
31306470
10.1371/journal.ppat.1007920
0
auth_asym_id
VH:VL
IGHV1
IGKV2
H
L
QVQLVQSGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSS
EVVITQSPLFLPVTPGEAASLSCKCSHSLQHSTGANYLAWYLQRPGQTPRLLIHLATHRASGVPDRFSGSGSGTDFTLKISRVESDDVGTYYCMQGLHSPWTFGQGTKVEIKR
QVQLVQSGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSS
VVITQSPLFLPVTPGEAASLSCKCSHSLQHSTGANYLAWYLQRPGQTPRLLIHLATHRASGVPDRFSGSGSGTDFTLKISRVESDDVGTYYCMQGLHSPWTFGQGTKVEIKR
17.361906
13.665879
140
113
140
112
140
112
44
pgt145 fab heavy chain
pgt145 fab light chain
homo sapiens
homo sapiens
A;C;E
protein;protein;protein
amc011 glycoprotein 120;amc011 glycoprotein 120;amc011 glycoprotein 120
human immunodeficiency virus 1;human immunodeficiency virus 1;human immunodeficiency virus 1
10;12;20
5;6;9
1.0;1.0;1.0
HL
train
6qd6_A
6qd6
molecular scaffolds expand the nanobody toolkit for cryo-em applications: crystal structure of mb-chopq-nb207
no
structural protein
2018-12-31
2019-12-18
x-ray diffraction
2.84
0.239
0.204
N.A.
10.1038/s41592-020-01001-6
0
auth_asym_id
VH+
IGHV3
N.A.
A
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
QLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAVI...
N.A.
32.823402
0
542
0
448
0
531
0
0
mb-chopq-nb207,outer membrane protein,mb-chopq-nb207,outer membrane protein,mb-chopq-nb207
N.A.
helicobacter pylori
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qd6_B
6qd6
molecular scaffolds expand the nanobody toolkit for cryo-em applications: crystal structure of mb-chopq-nb207
no
structural protein
2018-12-31
2019-12-18
x-ray diffraction
2.84
0.239
0.204
N.A.
10.1038/s41592-020-01001-6
0
auth_asym_id
VH+
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
31.115587
0
542
0
446
0
532
0
0
mb-chopq-nb207,outer membrane protein,mb-chopq-nb207,outer membrane protein,mb-chopq-nb207
N.A.
helicobacter pylori
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qd6_C
6qd6
molecular scaffolds expand the nanobody toolkit for cryo-em applications: crystal structure of mb-chopq-nb207
no
structural protein
2018-12-31
2019-12-18
x-ray diffraction
2.84
0.239
0.204
N.A.
10.1038/s41592-020-01001-6
0
auth_asym_id
VH+
IGHV3
N.A.
C
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
29.761522
0
542
0
431
0
532
0
0
mb-chopq-nb207,outer membrane protein,mb-chopq-nb207,outer membrane protein,mb-chopq-nb207
N.A.
helicobacter pylori
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qd6_D
6qd6
molecular scaffolds expand the nanobody toolkit for cryo-em applications: crystal structure of mb-chopq-nb207
no
structural protein
2018-12-31
2019-12-18
x-ray diffraction
2.84
0.239
0.204
N.A.
10.1038/s41592-020-01001-6
0
auth_asym_id
VH+
IGHV3
N.A.
D
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
VQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAV...
N.A.
32.81337
0
542
0
446
0
531
0
0
mb-chopq-nb207,outer membrane protein,mb-chopq-nb207,outer membrane protein,mb-chopq-nb207
N.A.
helicobacter pylori
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qd6_E
6qd6
molecular scaffolds expand the nanobody toolkit for cryo-em applications: crystal structure of mb-chopq-nb207
no
structural protein
2018-12-31
2019-12-18
x-ray diffraction
2.84
0.239
0.204
N.A.
10.1038/s41592-020-01001-6
0
auth_asym_id
VH+
IGHV3
N.A.
E
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
VQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAV...
N.A.
31.00513
0
542
0
451
0
531
0
0
mb-chopq-nb207,outer membrane protein,mb-chopq-nb207,outer membrane protein,mb-chopq-nb207
N.A.
helicobacter pylori
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qd6_F
6qd6
molecular scaffolds expand the nanobody toolkit for cryo-em applications: crystal structure of mb-chopq-nb207
no
structural protein
2018-12-31
2019-12-18
x-ray diffraction
2.84
0.239
0.204
N.A.
10.1038/s41592-020-01001-6
0
auth_asym_id
VH+
IGHV3
N.A.
F
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
VQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAV...
N.A.
33.98708
0
542
0
457
0
531
0
0
mb-chopq-nb207,outer membrane protein,mb-chopq-nb207,outer membrane protein,mb-chopq-nb207
N.A.
helicobacter pylori
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qd6_G
6qd6
molecular scaffolds expand the nanobody toolkit for cryo-em applications: crystal structure of mb-chopq-nb207
no
structural protein
2018-12-31
2019-12-18
x-ray diffraction
2.84
0.239
0.204
N.A.
10.1038/s41592-020-01001-6
0
auth_asym_id
VH+
IGHV3
N.A.
G
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
VQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAV...
N.A.
33.04292
0
542
0
469
0
531
0
0
mb-chopq-nb207,outer membrane protein,mb-chopq-nb207,outer membrane protein,mb-chopq-nb207
N.A.
helicobacter pylori
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qd6_H
6qd6
molecular scaffolds expand the nanobody toolkit for cryo-em applications: crystal structure of mb-chopq-nb207
no
structural protein
2018-12-31
2019-12-18
x-ray diffraction
2.84
0.239
0.204
N.A.
10.1038/s41592-020-01001-6
0
auth_asym_id
VH+
IGHV3
N.A.
H
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
LVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAVIC...
N.A.
30.89664
0
542
0
399
0
528
0
0
mb-chopq-nb207,outer membrane protein,mb-chopq-nb207,outer membrane protein,mb-chopq-nb207
N.A.
helicobacter pylori
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qd6_I
6qd6
molecular scaffolds expand the nanobody toolkit for cryo-em applications: crystal structure of mb-chopq-nb207
no
structural protein
2018-12-31
2019-12-18
x-ray diffraction
2.84
0.239
0.204
N.A.
10.1038/s41592-020-01001-6
0
auth_asym_id
VH+
IGHV3
N.A.
I
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
VQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAV...
N.A.
34.55336
0
542
0
419
0
531
0
0
mb-chopq-nb207,outer membrane protein,mb-chopq-nb207,outer membrane protein,mb-chopq-nb207
N.A.
helicobacter pylori
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qd6_J
6qd6
molecular scaffolds expand the nanobody toolkit for cryo-em applications: crystal structure of mb-chopq-nb207
no
structural protein
2018-12-31
2019-12-18
x-ray diffraction
2.84
0.239
0.204
N.A.
10.1038/s41592-020-01001-6
0
auth_asym_id
VH+
IGHV3
N.A.
J
N.A.
QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA...
N.A.
QTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAVICGGYTKSPGE...
N.A.
29.344706
0
542
0
380
0
520
0
0
mb-chopq-nb207,outer membrane protein,mb-chopq-nb207,outer membrane protein,mb-chopq-nb207
N.A.
helicobacter pylori
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6nip_A_B
6nip
crystal structure of a human anti-zikv-denv neutralizing antibody mz1 in complex with zikv e glycoprotein
no
viral protein/immune system
2018-12-31
2019-12-25
x-ray diffraction
4.16
0.237
0.188
32015557
10.1038/s41591-019-0746-2
0
auth_asym_id
FabH:FabL
IGHV4
IGLV1
A
B
QVQLQESGPGLVKSSETLSLSCTVSGASISNFYWSWVRQPPGKGLEWMGSIYYTGTITYNPSLKSRLTMSVDTSKNQFSLKLNSVTAADTAVYSCAGLDRFNWNDEGDCWGQGTLVTVFSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
QSVLTQPPSASGTPGQRVTISCSGSRSNLGRNTVNWYQQLPGVAPKLLIYSNNRRPSGVPDRFSGSKSDTSASLAISGLQSEDEADYFCAAWDDSLNGLYVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
QVQLQESGPGLVKSSETLSLSCTVSGASISNFYWSWVRQPPGKGLEWMGSIYYTGTITYNPSLKSRLTMSVDTSKNQFSLKLNSVTAADTAVYSCAGLDRFNWNDEGDCWGQGTLVTVFSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
QSVLTQPPSASGTPGQRVTISCSGSRSNLGRNTVNWYQQLPGVAPKLLIYSNNRRPSGVPDRFSGSKSDTSASLAISGLQSEDEADYFCAAWDDSLNGLYVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
24.517616
19.56582
225
216
221
214
221
214
103
mz1 heavy chain
mz1 light chain
homo sapiens
homo sapiens
E
protein
envelope protein e
zika virus (isolate zikv/human/french polynesia/10087pf/2013)
44
15
0.68
HL
train
6nip_H_L
6nip
crystal structure of a human anti-zikv-denv neutralizing antibody mz1 in complex with zikv e glycoprotein
no
viral protein/immune system
2018-12-31
2019-12-25
x-ray diffraction
4.16
0.237
0.188
32015557
10.1038/s41591-019-0746-2
0
auth_asym_id
FabH:FabL
IGHV4
IGLV1
H
L
QVQLQESGPGLVKSSETLSLSCTVSGASISNFYWSWVRQPPGKGLEWMGSIYYTGTITYNPSLKSRLTMSVDTSKNQFSLKLNSVTAADTAVYSCAGLDRFNWNDEGDCWGQGTLVTVFSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
QSVLTQPPSASGTPGQRVTISCSGSRSNLGRNTVNWYQQLPGVAPKLLIYSNNRRPSGVPDRFSGSKSDTSASLAISGLQSEDEADYFCAAWDDSLNGLYVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
QVQLQESGPGLVKSSETLSLSCTVSGASISNFYWSWVRQPPGKGLEWMGSIYYTGTITYNPSLKSRLTMSVDTSKNQFSLKLNSVTAADTAVYSCAGLDRFNWNDEGDCWGQGTLVTVFSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
QSVLTQPPSASGTPGQRVTISCSGSRSNLGRNTVNWYQQLPGVAPKLLIYSNNRRPSGVPDRFSGSKSDTSASLAISGLQSEDEADYFCAAWDDSLNGLYVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
24.526485
19.579025
225
216
221
214
221
214
100
mz1 heavy chain
mz1 light chain
homo sapiens
homo sapiens
Z
protein
envelope protein e
zika virus (isolate zikv/human/french polynesia/10087pf/2013)
42
13
0.68
HL
train
6nis_H_L
6nis
crystal structure of a human anti-zikv-denv neutralizing antibody mz24 isolated following zpiv vaccination
no
immune system
2018-12-31
2019-12-25
x-ray diffraction
2.11
0.2
0.165
32015557
10.1038/s41591-019-0746-2
0
auth_asym_id
FabH:FabL
IGHV4
IGLV1
H
L
QVQLQESGPGLVKSSETLSLSCTVSGASISSYYWSWVRQSPGKGLEWMGSIYYTGTTTYNPSLKSRLTISVDTSKNQFSLKLNSVTAADTAVYSCAGLDRFNWNDEGDCWGQGTLVTVFSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
QSVLTQPPSASGTPGQRVTISCSGSRSNLGRNTVNWYQQLPGVAPKLLIYSNSRRPSGVPDRFSGSKSDTSASLAISGLQSEDEADYYCAAWDDSLNGLYVFGTGTSVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
QVQLQESGPGLVKSSETLSLSCTVSGASISSYYWSWVRQSPGKGLEWMGSIYYTGTTTYNPSLKSRLTISVDTSKNQFSLKLNSVTAADTAVYSCAGLDRFNWNDEGDCWGQGTLVTVFSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
QSVLTQPPSASGTPGQRVTISCSGSRSNLGRNTVNWYQQLPGVAPKLLIYSNSRRPSGVPDRFSGSKSDTSASLAISGLQSEDEADYYCAAWDDSLNGLYVFGTGTSVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
20.963202
24.665146
225
216
223
216
223
216
111
mz24 antibody heavy chain
mz24 antibody light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
6qd8_Q_Y
6qd8
em structure of a ebov-gp bound to 4m0368 neutralizing antibody
no
viral protein
2019-01-01
2019-10-02
electron microscopy
3.3
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV4
IGKV1
Q
Y
QVQLQESGPGLVKPSGTLSLTCAVSGGSISGTNWWTWVRQPPGRGLEWIGEIYYRGSPNYNPSLKSRVTISVDQSKSQFSLKLTSVTAADTAVYYCLRLSHYGGAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQLTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPKFLIFSASNLQSGVPSRFSGGGSGTDFTLTISSLQPEDFATYYCQQTYNTPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLQESGPGLVKPSGTLSLTCAVSGGSISGTNWWTWVRQPPGRGLEWIGEIYYRGSPNYNPSLKSRVTISVDQSKSQFSLKLTSVTAADTAVYYCLRLSHYGGAWGQGTLVTVS
IQLTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPKFLIFSASNLQSGVPSRFSGGGSGTDFTLTISSLQPEDFATYYCQQTYNTPRTFGQGTKVE
13.704847
13.101145
219
214
114
104
114
104
47
heavy chain
light chain
homo sapiens
homo sapiens
B;D
protein;protein
envelope glycoprotein;envelope glycoprotein
ebola virus;ebola virus
27;16
14;6
0.88;0.86
HL
train
6qd8_H_L
6qd8
em structure of a ebov-gp bound to 4m0368 neutralizing antibody
no
viral protein
2019-01-01
2019-10-02
electron microscopy
3.3
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV4
IGKV1
H
L
QVQLQESGPGLVKPSGTLSLTCAVSGGSISGTNWWTWVRQPPGRGLEWIGEIYYRGSPNYNPSLKSRVTISVDQSKSQFSLKLTSVTAADTAVYYCLRLSHYGGAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQLTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPKFLIFSASNLQSGVPSRFSGGGSGTDFTLTISSLQPEDFATYYCQQTYNTPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLQESGPGLVKPSGTLSLTCAVSGGSISGTNWWTWVRQPPGRGLEWIGEIYYRGSPNYNPSLKSRVTISVDQSKSQFSLKLTSVTAADTAVYYCLRLSHYGGAWGQGTLVTVS
IQLTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPKFLIFSASNLQSGVPSRFSGGGSGTDFTLTISSLQPEDFATYYCQQTYNTPRTFGQGTKVE
13.704851
13.101139
219
214
114
104
114
104
50
heavy chain
light chain
homo sapiens
homo sapiens
B;F
protein;protein
envelope glycoprotein;envelope glycoprotein
ebola virus;ebola virus
15;28
6;15
0.86;0.88
HL
train
6qd8_W_Z
6qd8
em structure of a ebov-gp bound to 4m0368 neutralizing antibody
no
viral protein
2019-01-01
2019-10-02
electron microscopy
3.3
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV4
IGKV1
W
Z
QVQLQESGPGLVKPSGTLSLTCAVSGGSISGTNWWTWVRQPPGRGLEWIGEIYYRGSPNYNPSLKSRVTISVDQSKSQFSLKLTSVTAADTAVYYCLRLSHYGGAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQLTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPKFLIFSASNLQSGVPSRFSGGGSGTDFTLTISSLQPEDFATYYCQQTYNTPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLQESGPGLVKPSGTLSLTCAVSGGSISGTNWWTWVRQPPGRGLEWIGEIYYRGSPNYNPSLKSRVTISVDQSKSQFSLKLTSVTAADTAVYYCLRLSHYGGAWGQGTLVTVS
IQLTQSPSSLSASVGDRVTITCRASQSISTYLNWYQQKPGKAPKFLIFSASNLQSGVPSRFSGGGSGTDFTLTISSLQPEDFATYYCQQTYNTPRTFGQGTKVE
13.704865
13.10114
219
214
114
104
114
104
46
heavy chain
light chain
homo sapiens
homo sapiens
D;F
protein;protein
envelope glycoprotein;envelope glycoprotein
ebola virus;ebola virus
27;15
14;6
0.88;0.86
HL
train
6niy_N
6niy
a high-resolution cryo-electron microscopy structure of a calcitonin receptor-heterotrimeric gs protein complex
no
membrane protein
2019-01-02
2019-01-23
electron microscopy
3.34
N.A.
N.A.
32219215
10.1021/acsptsci.8b00056
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.895082
0
138
0
128
0
128
0
0
nanobody35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
37;34
12;12
0.67;0.71
H_only
train
6njl_L
6njl
architecture and subunit arrangement of native ampa receptors
no
membrane protein/immune system
2019-01-03
2019-04-24
electron microscopy
6.7
N.A.
N.A.
30975770
10.1126/science.aaw8250
0
auth_asym_id
scFv
N.A.
N.A.
L
N.A.
EVKLLESGGGLVQPGGSLKLSCAASGFDFSEYWMSWVRQAPGKGLEWIGEINPDSSSIDYTPSLKDKIIISRDNAKKTLYLQLSKVRSEDTALYYCARPRGNYVVMDYWGQGTSVTVSSSGGGGSGGGGSGGGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGSSFVHWYQQKPGQPPKLLIFLASKLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQTNEDPYTFGGGTKLEIKRASNWSHPQFEK
N.A.
EVKLLESGGGLVQPGGSLKLSCAASGFDFSEYWMSWVRQAPGKGLEWIGEINPDSSSIDYTPSLKDKIIISRDNAKKTLYLQLSKVRSEDTALYYCARPRGNYVVMDYWGQGTSVTVSSSGGGGSGGGGSGGGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGSSFVHWYQQKPGQPPKLLIFLASKLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQTNEDPYTFGGGTKLEIKR
N.A.
17.808157
0
257
0
229
0
246
0
0
11b8 scfv
N.A.
mus musculus
N.A.
A
protein
glutamate receptor 1
rattus norvegicus
35
18
0.9
H_only
train
6njl_N_M
6njl
architecture and subunit arrangement of native ampa receptors
no
membrane protein/immune system
2019-01-03
2019-04-24
electron microscopy
6.7
N.A.
N.A.
30975770
10.1126/science.aaw8250
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
N
M
MVSAIVLYVLLAAAAHSAFAMQAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKLEVLFQGPGSGSADTITIRGYVRDNR
MEIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECSNWSHPQFEK
QAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKK
EIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
22.02173
22.908987
262
225
215
211
215
211
73
15f1 fab heavy chain
15f1 fab light chain
mus musculus
mus musculus
B
protein
glutamate receptor 2
rattus norvegicus
55
24
0.83
HL
train
6njl_I
6njl
architecture and subunit arrangement of native ampa receptors
no
membrane protein/immune system
2019-01-03
2019-04-24
electron microscopy
6.7
N.A.
N.A.
30975770
10.1126/science.aaw8250
0
auth_asym_id
scFv
N.A.
N.A.
I
N.A.
EVKLLESGGGLVQPGGSLKLSCAASGFDFSEYWMSWVRQAPGKGLEWIGEINPDSSSIDYTPSLKDKIIISRDNAKKTLYLQLSKVRSEDTALYYCARPRGNYVVMDYWGQGTSVTVSSSGGGGSGGGGSGGGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGSSFVHWYQQKPGQPPKLLIFLASKLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQTNEDPYTFGGGTKLEIKRASNWSHPQFEK
N.A.
EVKLLESGGGLVQPGGSLKLSCAASGFDFSEYWMSWVRQAPGKGLEWIGEINPDSSSIDYTPSLKDKIIISRDNAKKTLYLQLSKVRSEDTALYYCARPRGNYVVMDYWGQGTSVTVSSSGGGGSGGGGSGGGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGSSFVHWYQQKPGQPPKLLIFLASKLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQTNEDPYTFGGGTKLEIKR
N.A.
17.74987
0
257
0
229
0
246
0
0
11b8 scfv
N.A.
mus musculus
N.A.
C
protein
glutamate receptor 1
rattus norvegicus
42
22
0.88
H_only
train
6njl_K_J
6njl
architecture and subunit arrangement of native ampa receptors
no
membrane protein/immune system
2019-01-03
2019-04-24
electron microscopy
6.7
N.A.
N.A.
30975770
10.1126/science.aaw8250
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
K
J
MVSAIVLYVLLAAAAHSAFAMQAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKLEVLFQGPGSGSADTITIRGYVRDNR
MEIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECSNWSHPQFEK
QAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKK
EIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
22.098791
22.893347
262
225
215
211
215
211
79
15f1 fab heavy chain
15f1 fab light chain
mus musculus
mus musculus
D
protein
glutamate receptor 2
rattus norvegicus
55
24
0.83
HL
train
6njm_L_K
6njm
architecture and subunit arrangement of native ampa receptors
no
membrane protein/immune system
2019-01-03
2019-04-24
electron microscopy
6.5
N.A.
N.A.
30975770
10.1126/science.aaw8250
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
L
K
MVSAIVLYVLLAAAAHSAFAMQAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKLEVLFQGPGSGSADTITIRGYVRDNR
MEIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECSNWSHPQFEK
QAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKK
EIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
22.02851
22.935043
262
225
215
211
215
211
83
15f1 fab heavy chain
15f1 fab light chain
mus musculus
mus musculus
B
protein
glutamate receptor 2
rattus norvegicus
59
25
0.78
HL
train
6njm_P_O
6njm
architecture and subunit arrangement of native ampa receptors
no
membrane protein/immune system
2019-01-03
2019-04-24
electron microscopy
6.5
N.A.
N.A.
30975770
10.1126/science.aaw8250
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
P
O
MVSAIVLYVLLAAAAHSAFAMQAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKLEVLFQGPGSGSADTITIRGYVRDNR
MEIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECSNWSHPQFEK
QAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKK
EIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
22.014734
22.932547
262
225
215
211
215
211
83
15f1 fab heavy chain
15f1 fab light chain
mus musculus
mus musculus
D
protein
glutamate receptor 2
rattus norvegicus
56
24
0.8
HL
train
6njn_I
6njn
architecture and subunit arrangement of native ampa receptors
no
membrane protein
2019-01-03
2019-04-24
electron microscopy
6.5
N.A.
N.A.
30975770
10.1126/science.aaw8250
0
auth_asym_id
scFv
N.A.
N.A.
I
N.A.
EVKLLESGGGLVQPGGSLKLSCAASGFDFSEYWMSWVRQAPGKGLEWIGEINPDSSSIDYTPSLKDKIIISRDNAKKTLYLQLSKVRSEDTALYYCARPRGNYVVMDYWGQGTSVTVSSSGGGGSGGGGSGGGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGSSFVHWYQQKPGQPPKLLIFLASKLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQTNEDPYTFGGGTKLEIKRASNWSHPQFEK
N.A.
EVKLLESGGGLVQPGGSLKLSCAASGFDFSEYWMSWVRQAPGKGLEWIGEINPDSSSIDYTPSLKDKIIISRDNAKKTLYLQLSKVRSEDTALYYCARPRGNYVVMDYWGQGTSVTVSSSGGGGSGGGGSGGGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGSSFVHWYQQKPGQPPKLLIFLASKLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQTNEDPYTFGGGTKLEIKR
N.A.
17.882402
0
257
0
224
0
246
0
0
11b8 scfv
N.A.
mus musculus
N.A.
A
protein
glutamate receptor 1
rattus norvegicus
40
20
0.91
H_only
train
6njn_K_J
6njn
architecture and subunit arrangement of native ampa receptors
no
membrane protein
2019-01-03
2019-04-24
electron microscopy
6.5
N.A.
N.A.
30975770
10.1126/science.aaw8250
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
K
J
MVSAIVLYVLLAAAAHSAFAMQAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKLEVLFQGPGSGSADTITIRGYVRDNR
MEIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECSNWSHPQFEK
QAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKK
EIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
22.045513
22.964289
262
225
215
211
215
211
93
15f1 fab heavy chain
15f1 fab light chain
mus musculus
mus musculus
B
protein
glutamate receptor 2
rattus norvegicus
55
24
0.83
HL
train
6njn_O_N
6njn
architecture and subunit arrangement of native ampa receptors
no
membrane protein
2019-01-03
2019-04-24
electron microscopy
6.5
N.A.
N.A.
30975770
10.1126/science.aaw8250
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
O
N
MVSAIVLYVLLAAAAHSAFAMQAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKLEVLFQGPGSGSADTITIRGYVRDNR
MEIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECSNWSHPQFEK
QAQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVHWVRQPPGKGLEWLGVIWAGGSTNYNSALMSRVSISKDNSKSQVFLKMNSLQTDDTVMYYCAREDYDYDWHFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKK
EIQMTQTTSSLSASLGDRVTISCRASQDISNYLSWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGIDYSLTINNLEQEDFATYFCQQGNTLPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
22.081629
22.92496
262
225
215
211
215
211
84
15f1 fab heavy chain
15f1 fab light chain
mus musculus
mus musculus
D
protein
glutamate receptor 2
rattus norvegicus
58
26
0.81
HL
train
6qee_C_B
6qee
nanodisc reconstituted human-mouse chimeric abcb1 (abcb1hm)-eq mutant in complex with uic2 fab and zosuquidar.
no
membrane protein
2019-01-07
2019-02-27
electron microscopy
3.9
N.A.
N.A.
30765569
10.1126/science.aav7102
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
C
B
EVQLQESGPELVKTGASVKISCKASGYSFSNYYIHWVKQSHGKSLEWIGFISCYNGATFYNQKFKGKATFTVDNSSSTAYMKFNSLTFEDSAVYYCARLPIQFGNFYPMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPT
QVVMTQSPLSLPVSLGDQASISCRSSQSLLHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHIPPWTFGGGTKLDIKRADAAPTVSIFPPSSEQLTSGGLSVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQESGPELVKTGASVKISCKASGYSFSNYYIHWVKQSHGKSLEWIGFISCYNGATFYNQKFKGKATFTVDNSSSTAYMKFNSLTFEDSAVYYCARLPIQFGNFYPMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPT
QVVMTQSPLSLPVSLGDQASISCRSSQSLLHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHIPPWTFGGGTKLDIKRADAAPTVSIFPPSSEQLTSGGLSVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
24.287437
23.65459
225
220
225
220
225
220
107
uic2 antigen binding fragment heavy chain
uic2 antigen binding fragment light chain
mus musculus
mus musculus
A
protein
abcb1hm-eq
homo sapiens
52
21
0.88
HL
train
6qex_C_B
6qex
nanodisc reconstituted human abcb1 in complex with uic2 fab and taxol
yes
membrane protein
2019-01-08
2019-02-27
electron microscopy
3.6
N.A.
N.A.
30765569
10.1126/science.aav7102
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
C
B
EVQLQESGPELVKTGASVKISCKASGYSFSNYYIHWVKQSHGKSLEWIGFISCYNGATFYNQKFKGKATFTVDNSSSTAYMKFNSLTFEDSAVYYCARLPIQFGNFYPMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPT
QVVMTQSPLSLPVSLGDQASISCRSSQSLLHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHIPPWTFGGGTKLDIKRADAAPTVSIFPPSSEQLTSGGLSVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQESGPELVKTGASVKISCKASGYSFSNYYIHWVKQSHGKSLEWIGFISCYNGATFYNQKFKGKATFTVDNSSSTAYMKFNSLTFEDSAVYYCARLPIQFGNFYPMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPT
QVVMTQSPLSLPVSLGDQASISCRSSQSLLHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHIPPWTFGGGTKLDIKRADAAPTVSIFPPSSEQLTSGGLSVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
24.275614
23.593687
225
220
225
220
225
220
102
uic2 fab heavy chain
uic2 fab lightchain
mus musculus
mus musculus
A
protein
multidrug resistance protein 1
homo sapiens
58
21
0.81
HL
train
6qf6_A
6qf6
structure of an e.coli expressed anti-mcl1 scfv
no
apoptosis
2019-01-09
2019-11-13
x-ray diffraction
2.59
0.262
0.181
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
A
N.A.
GSQVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVL
N.A.
TLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVL
N.A.
17.204172
0
247
0
226
0
243
0
0
e.coli expressed scfv
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qf6_B
6qf6
structure of an e.coli expressed anti-mcl1 scfv
no
apoptosis
2019-01-09
2019-11-13
x-ray diffraction
2.59
0.262
0.181
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
B
N.A.
GSQVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVL
N.A.
QVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVL
N.A.
17.1594
0
247
0
228
0
245
0
0
e.coli expressed scfv
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qf6_C
6qf6
structure of an e.coli expressed anti-mcl1 scfv
no
apoptosis
2019-01-09
2019-11-13
x-ray diffraction
2.59
0.262
0.181
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
C
N.A.
GSQVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVL
N.A.
QVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVL
N.A.
17.164045
0
247
0
227
0
245
0
0
e.coli expressed scfv
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6qf6_D
6qf6
structure of an e.coli expressed anti-mcl1 scfv
no
apoptosis
2019-01-09
2019-11-13
x-ray diffraction
2.59
0.262
0.181
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
GSQVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVL
N.A.
QVTLKESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISSSSSYIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARQVGATWAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNAWVFGGGTKLTVL
N.A.
17.165154
0
247
0
228
0
245
0
0
e.coli expressed scfv
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6j5d_H_L
6j5d
complex structure of mab 4.2-scfv with louping ill virus envelope protein domain iii
no
viral protein/immune system
2019-01-10
2019-02-06
x-ray diffraction
1.8
0.189
0.17
30760569
10.1128/JVI.02132-18
0
auth_asym_id
VH:VL
IGHV1
IGKV1
H
L
QVQLQQSGPELVKPGASVKMSCKASGYTFTDYVIGWVKQRTGQGLEWIGEIYPGSGTTYYNEKFKDKATLTADKSSNTAYMQLSSLTSEDSAVYFCARGEDGYYIALDYWGQGTTVTVSS
DIELTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYKAQTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPPWTFGGGTKLEIKR
QVQLQQSGPELVKPGASVKMSCKASGYTFTDYVIGWVKQRTGQGLEWIGEIYPGSGTTYYNEKFKDKATLTADKSSNTAYMQLSSLTSEDSAVYFCARGEDGYYIALDYWGQGTTVTVSS
DIELTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYKAQTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPPWTFGGGTKLEIK
13.849766
13.34052
120
109
120
108
120
108
43
antibody heavy chain
antibody light chain
mus musculus
mus musculus
A
protein
envelope
louping ill virus
32
17
0.94
HL
train
6j5g_H_L
6j5g
complex structure of mab 4.2-scfv with tick-borne encephalitis virus envelope protein
no
viral protein/immune system
2019-01-10
2019-02-06
x-ray diffraction
3.29
0.222
0.208
30760569
10.1128/JVI.02132-18
0
auth_asym_id
VH:VL
IGHV1
IGKV1
H
L
QVQLQQSGPELVKPGASVKMSCKASGYTFTDYVIGWVKQRTGQGLEWIGEIYPGSGTTYYNEKFKDKATLTADKSSNTAYMQLSSLTSEDSAVYFCARGEDGYYIALDYWGQGTTVTVSS
DIELTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYKAQTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPPWTFGGGTKLEIKR
QVQLQQSGPELVKPGASVKMSCKASGYTFTDYVIGWVKQRTGQGLEWIGEIYPGSGTTYYNEKFKDKATLTADKSSNTAYMQLSSLTSEDSAVYFCARGEDGYYIALDYWGQGTTVTVSS
DIELTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYKAQTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPPWTFGGGTKLEIK
13.828165
13.365933
120
109
120
108
120
108
42
antibody heavy chain
antibody light chain
mus musculus
mus musculus
A
protein
envelope protein e
tick-borne encephalitis virus european subtype (strain neudoerfl)
34
18
0.95
HL
train
6nm6_D_E
6nm6
crystal structure of hiv-1 bg505 sosip.664 prefusion env trimer bound to n6 fr3-03 scfv in complex with crystallization chaperones 3h109l fab and 35o22 scfv at 3.2 angstrom
yes
immune system
2019-01-10
2019-02-27
x-ray diffraction
2.74
0.288
0.24
30760721
10.1038/s41467-019-08658-4
0
auth_asym_id
VH:VL
IGHV1
IGLV2
D
E
QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTGGGGSGGGGSGGGGSGGGG
SQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSGGLVPRGSHHHHHHHH
QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLT
SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLG
14.357499
13.408216
153
130
128
110
128
110
46
35o22 scfv heavy chain
35o22 scfv light chain
homo sapiens
homo sapiens
B;G
protein;protein
envelope glycoprotein gp41;envelope glycoprotein gp120
human immunodeficiency virus 1;human immunodeficiency virus 1
25;16
12;5
0.86;0.56
HL
train
6nm6_H_L
6nm6
crystal structure of hiv-1 bg505 sosip.664 prefusion env trimer bound to n6 fr3-03 scfv in complex with crystallization chaperones 3h109l fab and 35o22 scfv at 3.2 angstrom
yes
immune system
2019-01-10
2019-02-27
x-ray diffraction
2.74
0.288
0.24
30760721
10.1038/s41467-019-08658-4
0
auth_asym_id
FabH:FabL
IGHV4
IGLV3
H
L
QVQLQESGPGLVKPSETLSLTCTVSGGSISNYYWSWIRQSPGKGLEWIGYISDSESTNYNPSLKSRVIISVDTSKNQLSLKLNSVTAADSAIYYCARAQQGKRIYGMVSFGEFFYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
SVTSYVRPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPMQWKMHKSYSCQVTHEGSTVEKTVAPTECS
QVQLQESGPGLVKPSETLSLTCTVSGGSISNYYWSWIRQSPGKGLEWIGYISDSESTNYNPSLKSRVIISVDTSKNQLSLKLNSVTAADSAIYYCARAQQGKRIYGMVSFGEFFYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
YVRPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPMQWKMHKSYSCQVTHEGSTVEKTVAPT
22.28917
24.183851
244
217
226
210
232
210
103
3h109l fab heavy chain
3h109l fab light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
26
11
0.92
HL
train
6nm6_U_V
6nm6
crystal structure of hiv-1 bg505 sosip.664 prefusion env trimer bound to n6 fr3-03 scfv in complex with crystallization chaperones 3h109l fab and 35o22 scfv at 3.2 angstrom
yes
immune system
2019-01-10
2019-02-27
x-ray diffraction
2.74
0.288
0.24
30760721
10.1038/s41467-019-08658-4
0
auth_asym_id
VH:VL
IGHV1
IGKV1
U
V
RAHLVQSGTAMKKPGASVRVSCQTSGYTFTAHILFWFRQAPGRGLEWVGWIKPQYGAVNFGGGFRDRVTLTRQLSQDPDDPDWGIAYMDIRGLKPDDTAVYYCARDRSYGDSSWALDAWGQGTTVVVSAGGLVPRGSHHHHHHHH
YIHVTQSPSSLSVSIGDRVTINCQTSQGVGSDLHWYQHKPGRAPKLLIHHTSSVEDGVPSRFSGSGFHTSFNLTISDLQADDIATYYCQVLQFFGRGSRLHIKGGGGSGGGGSGGGGSGGGG
RAHLVQSGTAMKKPGASVRVSCQTSGYTFTAHILFWFRQAPGRGLEWVGWIKPQYGAVNFGGGFRDRVTLTRQLSQDPDDPDWGIAYMDIRGLKPDDTAVYYCARDRSYGDSSWALDAWGQGTTVVVS
HVTQSPSSLSVSIGDRVTINCQTSQGVGSDLHWYQHKPGRAPKLLIHHTSSVEDGVPSRFSGSGFHTSFNLTISDLQADDIATYYCQVLQFFGRGSRLH
14.351629
12.645051
145
122
128
99
128
99
36
n6 fr3-03 heavy chain
n6 fr3-03 light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
58
16
0.53
HL
train
6nmt_B_A
6nmt
non-blocking fab 3 anti-sirp-alpha antibody in complex with sirp-alpha variant 1
no
immune system
2019-01-11
2019-08-07
x-ray diffraction
1.83
0.204
0.178
31257988
10.1080/19420862.2019.1624123
0
auth_asym_id
FabH:FabL
IGHV3
IGLV3
B
A
AVTLDESGGGLQTPGGALSLVCKASGFIFSDYGMNWVRQAPGKGLEFVAQITSGSRTYYGAAVKGRATISRDNRQSTVKLQLNNLRAEDTGIYFCARDFGSGVGSIDAWGNGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
ALTQPASVSANLGGTVKITCSGSRGRYGWYQQRSPGSAPVTVIYRDNQRPSNIPSRFSSSTSGSTSTLTITGVQADDESVYFCGSYDGSIDIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
AVTLDESGGGLQTPGGALSLVCKASGFIFSDYGMNWVRQAPGKGLEFVAQITSGSRTYYGAAVKGRATISRDNRQSTVKLQLNNLRAEDTGIYFCARDFGSGVGSIDAWGNGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
ALTQPASVSANLGGTVKITCSGSRGRYGWYQQRSPGSAPVTVIYRDNQRPSNIPSRFSSSTSGSTSTLTITGVQADDESVYFCGSYDGSIDIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.62208
22.668587
228
209
214
208
220
208
96
fab 3 anti-sirp-alpha antibody variable heavy chain
fab 3 anti-sirp-alpha antibody variable light chain
homo sapiens
homo sapiens
C
protein
tyrosine-protein phosphatase non-receptor type substrate 1
homo sapiens
37
19
0.95
HL
train
6nmu_B_A
6nmu
kick-off fab 115 anti-sirp-alpha antibody in complex with sirp-alpha variant 1
no
immune system
2019-01-11
2019-08-07
x-ray diffraction
2.55
0.261
0.193
31257988
10.1080/19420862.2019.1624123
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
B
A
DVQLVESGGGVVRPGESLRLSCAASGFSFSSYAMNWVRQAPGEGLEWVSRINSGGGGTDYAESVKGRFTISRDNSENTLYLQMNSLRAEDTAVYYCAKQYDWNSFFDYWGLGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
ETVLTQSPATLSVSPGERATLSCRASQTVGSKLAWHQQKPGQAPRLLIYDATNRATGISDRFSGSGSGTDFTLTISSLQTEDSAVYYCQQYYYWPPYRFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DVQLVESGGGVVRPGESLRLSCAASGFSFSSYAMNWVRQAPGEGLEWVSRINSGGGGTDYAESVKGRFTISRDNSENTLYLQMNSLRAEDTAVYYCAKQYDWNSFFDYWGLGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
ETVLTQSPATLSVSPGERATLSCRASQTVGSKLAWHQQKPGQAPRLLIYDATNRATGISDRFSGSGSGTDFTLTISSLQTEDSAVYYCQQYYYWPPYRFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.896732
22.781046
228
215
218
213
222
213
100
fab 115 anti-sirp-alpha antibody variable heavy chain
fab 115 anti-sirp-alpha antibody variable light chain
homo sapiens
homo sapiens
C
protein
tyrosine-protein phosphatase non-receptor type substrate 1
homo sapiens
42
20
0.95
HL
train
6nmu_H_L
6nmu
kick-off fab 115 anti-sirp-alpha antibody in complex with sirp-alpha variant 1
no
immune system
2019-01-11
2019-08-07
x-ray diffraction
2.55
0.261
0.193
31257988
10.1080/19420862.2019.1624123
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
H
L
DVQLVESGGGVVRPGESLRLSCAASGFSFSSYAMNWVRQAPGEGLEWVSRINSGGGGTDYAESVKGRFTISRDNSENTLYLQMNSLRAEDTAVYYCAKQYDWNSFFDYWGLGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
ETVLTQSPATLSVSPGERATLSCRASQTVGSKLAWHQQKPGQAPRLLIYDATNRATGISDRFSGSGSGTDFTLTISSLQTEDSAVYYCQQYYYWPPYRFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DVQLVESGGGVVRPGESLRLSCAASGFSFSSYAMNWVRQAPGEGLEWVSRINSGGGGTDYAESVKGRFTISRDNSENTLYLQMNSLRAEDTAVYYCAKQYDWNSFFDYWGLGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
ETVLTQSPATLSVSPGERATLSCRASQTVGSKLAWHQQKPGQAPRLLIYDATNRATGISDRFSGSGSGTDFTLTISSLQTEDSAVYYCQQYYYWPPYRFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.647724
22.758665
228
215
215
213
221
213
89
fab 115 anti-sirp-alpha antibody variable heavy chain
fab 115 anti-sirp-alpha antibody variable light chain
homo sapiens
homo sapiens
S
protein
tyrosine-protein phosphatase non-receptor type substrate 1
homo sapiens
44
19
0.95
HL
train
6nn3_H_L
6nn3
structure of parvovirus b19 decorated with fab molecules from a human antibody
no
virus like particle
2019-01-14
2019-02-13
electron microscopy
3.22
N.A.
N.A.
30787153
10.1128/JVI.01732-18
0
auth_asym_id
VH:VL
IGHV4
IGLV3
H
L
QVQLQESGPGLVRPSQTLSLSCTVSGASISSGGYYWSWIRQHPGKGLEWIGHIYYSGTVYYNPSLRSRVSISIDNQLSLKVASVTAADTAVYYCARVRVDSVRGAGDNGFDPWGHGTLVTV
AAALTQPLSVSVSPGQTAIFTCSGDNLGDKYVYWFQQRPGQSPALLIYQDNKRPSGIPERFSGSNSGNTATLTISGTQSTDEADYYCQTWDSTVVFGGGTKL
QVQLQESGPGLVRPSQTLSLSCTVSGASISSGGYYWSWIRQHPGKGLEWIGHIYYSGTVYYNPSLRSRVSISIDNQLSLKVASVTAADTAVYYCARVRVDSVRGAGDNGFDPWGHGTLVTV
AAALTQPLSVSVSPGQTAIFTCSGDNLGDKYVYWFQQRPGQSPALLIYQDNKRPSGIPERFSGSNSGNTATLTISGTQSTDEADYYCQTWDSTVVFGGGTKL
14.079838
12.750802
121
102
121
102
121
102
46
fab monoclonal antibody 860-55d, heavy chain
fab monoclonal antibody 860-55d, light chain
homo sapiens
homo sapiens
A
protein
vp2 of b19 parvovirus
human parvovirus b19
30
5
0.31
HL
train
6nnf_D_E
6nnf
crystal structure of hiv-1 bg505 sosip.664 prefusion env trimer bound to vrc01 fr3-03 scfv in complex with crystallization chaperones 3h109l fab and 35o22 scfv at 3.5 angstrom
yes
immune system
2019-01-14
2019-02-27
x-ray diffraction
2.76
0.298
0.242
30760721
10.1038/s41467-019-08658-4
0
auth_asym_id
VH:VL
IGHV1
IGLV2
D
E
QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTGGGGSGGGGSGGGGSGGGG
SQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSGGLVPRGSHHHHHHHH
QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLT
SQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLG
14.391223
13.547882
153
130
128
112
128
112
53
35o22 scfv heavy chain
35o22 scfv light chain
homo sapiens
homo sapiens
B
protein
envelope glycoprotein gp41
human immunodeficiency virus 1
30
13
0.81
HL
train
6nnf_H_L
6nnf
crystal structure of hiv-1 bg505 sosip.664 prefusion env trimer bound to vrc01 fr3-03 scfv in complex with crystallization chaperones 3h109l fab and 35o22 scfv at 3.5 angstrom
yes
immune system
2019-01-14
2019-02-27
x-ray diffraction
2.76
0.298
0.242
30760721
10.1038/s41467-019-08658-4
0
auth_asym_id
FabH:FabL
IGHV4
IGLV3
H
L
QVQLQESGPGLVKPSETLSLTCTVSGGSISNYYWSWIRQSPGKGLEWIGYISDSESTNYNPSLKSRVIISVDTSKNQLSLKLNSVTAADSAIYYCARAQQGKRIYGMVSFGEFFYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
SVTSYVRPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPMQWKMHKSYSCQVTHEGSTVEKTVAPTECS
QVQLQESGPGLVKPSETLSLTCTVSGGSISNYYWSWIRQSPGKGLEWIGYISDSESTNYNPSLKSRVIISVDTSKNQLSLKLNSVTAADSAIYYCARAQQGKRIYGMVSFGEFFYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
SYVRPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPMQWKMHKSYSCQVTHEGSTVEKTVAPT
22.425737
24.25889
244
217
227
211
232
211
99
3h109l fab heavy chain
3h109l fab light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
26
10
0.91
HL
train
6nnf_U_V
6nnf
crystal structure of hiv-1 bg505 sosip.664 prefusion env trimer bound to vrc01 fr3-03 scfv in complex with crystallization chaperones 3h109l fab and 35o22 scfv at 3.5 angstrom
yes
immune system
2019-01-14
2019-02-27
x-ray diffraction
2.76
0.298
0.242
30760721
10.1038/s41467-019-08658-4
0
auth_asym_id
VH:VL
IGHV1
IGKV3
U
V
QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRQLSQDPDDPDWGTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVGGLVPRGSHHHHHHHH
EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVGGGGSGGGGSGGGGS
QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRQLSQDPDDPDWGTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIV
VLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQ
14.411212
12.587023
142
115
126
97
126
97
35
vrc01 fr3-03 heavy chain
vrc01 fr3-03 light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
51
13
0.54
HL
train
6qgw_B
6qgw
crystal structure of e.coli bama beta-barrel in complex with nanobody e6
no
membrane protein
2019-01-14
2019-06-26
x-ray diffraction
1.94
0.23
0.189
31073665
10.1007/s10858-019-00250-8
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
SQMQLVESGGGLVQAGGSLTLSCAASGRTFSDYDMGWFRQAPGKAREFVARISRSGRMTSLADSVKGRFTISRDNGKRTVYLQMNSLKPEDTAVYYCAADPQWSRVRSGADYWGQGTRVTVSA
N.A.
QMQLVESGGGLVQAGGSLTLSCAASGRTFSDYDMGWFRQAPGKAREFVARISRSGRMTSLADSVKGRFTISRDNGKRTVYLQMNSLKPEDTAVYYCAADPQWSRVRSGADYWGQGTRVTVSA
N.A.
13.581407
0
123
0
122
0
122
0
0
nanoe6
N.A.
lama glama
N.A.
A
protein
outer membrane protein assembly factor bama
escherichia coli o157:h7
30
7
0.5
H_only
train
6qgy_B
6qgy
crystal structure of e.coli bama beta-barrel in complex with nanobody b12
yes
membrane protein
2019-01-14
2019-06-26
x-ray diffraction
2.51
0.244
0.222
31073665
10.1007/s10858-019-00250-8
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
SQGQLVESGGGMVQAGGSLRLSCAASGRTFNGWTAAWFRQAPGKDREFVAAISRSGDYTYYTNSVKGRFTISRDSAKNNLYLQMDSLKPEDTAVYYCAAKTGTWATMDRRYDYWGQGTRVTVSA
N.A.
QLVESGGGMVQAGGSLRLSCAASGRTFNGWTAAWFRQAPGKDREFVAAISRSGDYTYYTNSVKGRFTISRDSAKNNLYLQMDSLKPEDTAVYYCAAKTGTWATMDRRYDYWGQGTRVTVSA
N.A.
13.446344
0
124
0
121
0
121
0
0
nanob12
N.A.
lama glama
N.A.
A
protein
outer membrane protein assembly factor bama
escherichia coli o157:h7
53
14
0.64
H_only
train
6qgy_D
6qgy
crystal structure of e.coli bama beta-barrel in complex with nanobody b12
yes
membrane protein
2019-01-14
2019-06-26
x-ray diffraction
2.51
0.244
0.222
31073665
10.1007/s10858-019-00250-8
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
SQGQLVESGGGMVQAGGSLRLSCAASGRTFNGWTAAWFRQAPGKDREFVAAISRSGDYTYYTNSVKGRFTISRDSAKNNLYLQMDSLKPEDTAVYYCAAKTGTWATMDRRYDYWGQGTRVTVSA
N.A.
GQLVESGGGMVQAGGSLRLSCAASGRTFNGWTAAWFRQAPGKDREFVAAISRSGDYTYYTNSVKGRFTISRDSAKNNLYLQMDSLKPEDTAVYYCAAKTGTWATMDRRYDYWGQGTRVTVSA
N.A.
13.45709
0
124
0
122
0
122
0
0
nanob12
N.A.
lama glama
N.A.
A;C
protein;protein
outer membrane protein assembly factor bama;outer membrane protein assembly factor bama
escherichia coli o157:h7;escherichia coli o157:h7
15;54
7;15
0.78;0.62
H_only
train
6nnj_D_E
6nnj
crystal structure of hiv-1 bg505 sosip.664 prefusion env trimer bound to ch31 scfv in complex with crystallization chaperones 3h109l fab and 35o22 scfv at 3.1 angstrom
yes
immune system
2019-01-15
2019-02-27
x-ray diffraction
2.6
0.293
0.248
30760721
10.1038/s41467-019-08658-4
0
auth_asym_id
VH:VL
IGHV1
IGLV2
D
E
QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTGGGGSGGGGSGGGGSGGGG
SQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSGGLVPRGSHHHHHHHH
QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLT
SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLG
14.382375
13.41935
153
130
128
110
128
110
49
35o22 scfv heavy chain
35o22 scfv light chain
homo sapiens
homo sapiens
B;G
protein;protein
envelope glycoprotein gp41;envelope glycoprotein gp120
human immunodeficiency virus 1;human immunodeficiency virus 1
27;16
11;5
0.79;0.56
HL
train
6nnj_H_L
6nnj
crystal structure of hiv-1 bg505 sosip.664 prefusion env trimer bound to ch31 scfv in complex with crystallization chaperones 3h109l fab and 35o22 scfv at 3.1 angstrom
yes
immune system
2019-01-15
2019-02-27
x-ray diffraction
2.6
0.293
0.248
30760721
10.1038/s41467-019-08658-4
0
auth_asym_id
FabH:FabL
IGHV4
IGLV3
H
L
QVQLQESGPGLVKPSETLSLTCTVSGGSISNYYWSWIRQSPGKGLEWIGYISDSESTNYNPSLKSRVIISVDTSKNQLSLKLNSVTAADSAIYYCARAQQGKRIYGMVSFGEFFYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
SVTSYVRPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPMQWKMHKSYSCQVTHEGSTVEKTVAPTECS
QVQLQESGPGLVKPSETLSLTCTVSGGSISNYYWSWIRQSPGKGLEWIGYISDSESTNYNPSLKSRVIISVDTSKNQLSLKLNSVTAADSAIYYCARAQQGKRIYGMVSFGEFFYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
YVRPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPMQWKMHKSYSCQVTHEGSTVEKTVAPT
22.343023
24.215357
244
217
226
210
232
210
103
3h109l fab heavy chain
3h109l fab light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
25
10
0.91
HL
train
6nnj_U_V
6nnj
crystal structure of hiv-1 bg505 sosip.664 prefusion env trimer bound to ch31 scfv in complex with crystallization chaperones 3h109l fab and 35o22 scfv at 3.1 angstrom
yes
immune system
2019-01-15
2019-02-27
x-ray diffraction
2.6
0.293
0.248
30760721
10.1038/s41467-019-08658-4
0
auth_asym_id
VH:VL
IGHV1
IGKV1
U
V
QVQLVQSGAAVRKPGASVTVSCKFAEDDDYSPYWVNPAPEHFIHFLRQAPGQQLEWLAWMNPTNGAVNYAWYLNGRVTATRDRSMTTAFLEVKSLRSDDTAVYYCARAQKRGRSEWAYAHWGQGTPVVVSSGGLVPR
DIQMTQSPSSLSASLGDRVTITCQASRGIGKDLNWYQQKAGKAPKLLVSDASTLEGGVPSRFSGSGFHQNFSLTISSLQAEDVATYFCQQYETFGQGTKVDIGGGGSGGGGSGGGGS
VQLVQSGAAVRKPGASVTVSCKFAEDDDYSPYWVNPAPEHFIHFLRQAPGQQLEWLAWMNPTNGAVNYAWYLNGRVTATRDRSMTTAFLEVKSLRSDDTAVYYCARAQKRGRSEWAYAHWGQGTPVVVS
DIQMTQSPSSLSASLGDRVTITCQASRGIGKDLNWYQQKAGKAPKLLVSDASTLEGGVPSRFSGSGFHQNFSLTISSLQAEDVATYFCQQYETFGQGTKVD
15.403389
12.82838
137
117
129
101
129
101
31
ch31 scfv heavy chain
ch31 scfv light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
57
14
0.58
HL
train
6j71_B
6j71
hua21-scfv in complex with the extracellular domain(ecd) of her2
no
signaling protein
2019-01-16
2019-02-27
x-ray diffraction
2.92
0.267
0.208
31205018
10.1107/S2059798319006995
0
auth_asym_id
scFv
N.A.
N.A.
B
N.A.
ADIVLTQSPDSLAVSLGERVTINCKSSQPLEYSNNQWNYLAWYQQKPGQSPKLLISWASTRKSGVPDRFSGSGSGTDFTLTISSVQAEDVAVYYCGQYSDYPNTFGAGTKLEIKRGGGGSGGGGSGGGGSGGGGSQVQLVQSGAEVVKPGASVKISCKASGYPFTQYFIHWVKQNPGQRLEWIGQISSSYATVDYNQKFKGKATLTVDTSASIAYMELSSLRSEDTAVYYCVRSGNYEEYAMDYWGQGTLVTVS
N.A.
ADIVLTQSPDSLAVSLGERVTINCKSSQPLEYSNNQWNYLAWYQQKPGQSPKLLISWASTRKSGVPDRFSGSGSGTDFTLTISSVQAEDVAVYYCGQYSDYPNTFGAGTKLEIKRGGGGSGGGGSGGGGSGGGGSQVQLVQSGAEVVKPGASVKISCKASGYPFTQYFIHWVKQNPGQRLEWIGQISSSYATVDYNQKFKGKATLTVDTSASIAYMELSSLRSEDTAVYYCVRSGNYEEYAMDYWGQGTLVTVS
N.A.
17.514898
0
254
0
233
0
254
0
0
anti-her2 humanized antibody hua21
N.A.
homo sapiens
N.A.
A
protein
receptor tyrosine-protein kinase erbb-2
homo sapiens
44
18
0.9
H_only
train
6nou_A
6nou
an scfv derived from ixekizumab
no
immune system
2019-01-16
2019-06-19
x-ray diffraction
1.91
0.234
0.18
31181988
10.1080/19420862.2019.1624463
0
auth_asym_id
scFv
N.A.
N.A.
A
N.A.
QVQLVQSGAEVKKPGSSVKVSCKASGYSFTDYHIHWVRQAPGQCLEWMGVINPMYGTTDYNQRFKGRVTITADESTSTAYMELSSLRSEDTAVYYCARYDYFTGTGVYWGQGTLVTVSSQPDGGSGGSGGGSGGSKADYEKHKVDIVMTQTPLSLSVTPGQPASISCRSSRSLVHSRGNTYLHWYLQKPGQSPQLLIYKVSNRFIGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCSQSTHLPFTFGCGTKLEIK
N.A.
QVQLVQSGAEVKKPGSSVKVSCKASGYSFTDYHIHWVRQAPGQCLEWMGVINPMYGTTDYNQRFKGRVTITADESTSTAYMELSSLRSEDTAVYYCARYDYFTGTGVYWGQGTLVTVSSQPDGGSGGSGGGSGGSKADYEKHKVDIVMTQTPLSLSVTPGQPASISCRSSRSLVHSRGNTYLHWYLQKPGQSPQLLIYKVSNRFIGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCSQSTHLPFTFGCGTKLEIK
N.A.
17.415976
0
256
0
231
0
256
0
0
scfv derived from ixekizumab
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6j6y_B_C
6j6y
fgfr4 d2 - fab complex
no
transferase/immune system
2019-01-16
2019-08-07
x-ray diffraction
2.15
0.258
0.193
31350344
10.1158/1535-7163.MCT-18-0048
0
auth_asym_id
FabH:FabL
IGHV3
IGLV1
B
C
KLAATMKHLWFFLLLVAAPRWVLSEVQLLESGGGLVQPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSTISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARLTAYGHVDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
KLAATMVLQTQVFISLLLWISGAYGQSVLTQPPSASGTPGQRVTISCSGSSSNIGTNTVNWYQQLPGTAPKLLIYRNYQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGPHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSTISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARLTAYGHVDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
QSVLTQPPSASGTPGQRVTISCSGSSSNIGTNTVNWYQQLPGTAPKLLIYRNYQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGPHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
21.482225
23.971495
249
243
215
215
220
215
86
fab heavy chain
fab light chain
synthetic construct
synthetic construct
A
protein
fibroblast growth factor receptor 4
homo sapiens
48
20
0.74
HL
train
6j6y_E_F
6j6y
fgfr4 d2 - fab complex
no
transferase/immune system
2019-01-16
2019-08-07
x-ray diffraction
2.15
0.258
0.193
31350344
10.1158/1535-7163.MCT-18-0048
0
auth_asym_id
FabH:FabL
IGHV3
IGLV1
E
F
KLAATMKHLWFFLLLVAAPRWVLSEVQLLESGGGLVQPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSTISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARLTAYGHVDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
KLAATMVLQTQVFISLLLWISGAYGQSVLTQPPSASGTPGQRVTISCSGSSSNIGTNTVNWYQQLPGTAPKLLIYRNYQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGPHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSTISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARLTAYGHVDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
VLTQPPSASGTPGQRVTISCSGSSSNIGTNTVNWYQQLPGTAPKLLIYRNYQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGPHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
21.755554
23.204449
249
243
216
213
221
213
90
fab heavy chain
fab light chain
synthetic construct
synthetic construct
D
protein
fibroblast growth factor receptor 4
homo sapiens
47
20
0.74
HL
train
6j7w_A
6j7w
crystal structure of human bcma in complex with uniab(tm) vh
no
immune system
2019-01-18
2019-02-06
x-ray diffraction
2.6
0.271
0.208
30666250
10.3389/fimmu.2018.03037
0
auth_asym_id
VH
IGHV3
N.A.
A
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTVSSYGMSWVRQAPGKGPEWVSGIRGSDGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKQGENDGPFDHRGQGTLVTVS
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTVSSYGMSWVRQAPGKGPEWVSGIRGSDGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKQGENDGPFDHRGQGTLVTVS
N.A.
13.524839
0
118
0
118
0
118
0
0
uniab
N.A.
homo sapiens
N.A.
C
peptide
tumor necrosis factor receptor superfamily member 17
homo sapiens
36
10
0.5
H_only
train
6j7w_B
6j7w
crystal structure of human bcma in complex with uniab(tm) vh
no
immune system
2019-01-18
2019-02-06
x-ray diffraction
2.6
0.271
0.208
30666250
10.3389/fimmu.2018.03037
0
auth_asym_id
VH
IGHV3
N.A.
B
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTVSSYGMSWVRQAPGKGPEWVSGIRGSDGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKQGENDGPFDHRGQGTLVTVS
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTVSSYGMSWVRQAPGKGPEWVSGIRGSDGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKQGENDGPFDHRGQGTLVTVS
N.A.
13.559052
0
118
0
118
0
118
0
0
uniab
N.A.
homo sapiens
N.A.
D
peptide
tumor necrosis factor receptor superfamily member 17
homo sapiens
37
11
0.52
H_only
train
6nqd_C_D
6nqd
cryo-em structure of t/f100 sosip.664 hiv-1 env trimer in complex with 8anc195 fab
no
viral protein/immune system
2019-01-21
2019-03-06
electron microscopy
3.9
N.A.
N.A.
30787293
10.1038/s41467-019-08825-7
0
auth_asym_id
VH:VL
IGHV1
IGKV1
C
D
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISV
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVK
14.591068
13.317707
244
215
130
108
130
108
51
8anc195 g52k5 heavy chain, ig gamma-1 chain
8anc195 g52k5 light chain
homo sapiens
homo sapiens
A;B
protein;protein
t/f100 env gp120;t/f100 env gp41
human immunodeficiency virus 1;human immunodeficiency virus 1
43;26
12;12
0.67;1.0
HL
train
6nqd_G_H
6nqd
cryo-em structure of t/f100 sosip.664 hiv-1 env trimer in complex with 8anc195 fab
no
viral protein/immune system
2019-01-21
2019-03-06
electron microscopy
3.9
N.A.
N.A.
30787293
10.1038/s41467-019-08825-7
0
auth_asym_id
VH:VL
IGHV1
IGKV1
G
H
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISV
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVK
14.591482
13.318176
244
215
130
108
130
108
51
8anc195 g52k5 heavy chain, ig gamma-1 chain
8anc195 g52k5 light chain
homo sapiens
homo sapiens
E;F
protein;protein
t/f100 env gp120;t/f100 env gp41
human immunodeficiency virus 1;human immunodeficiency virus 1
43;26
12;12
0.67;1.0
HL
train
6nqd_K_L
6nqd
cryo-em structure of t/f100 sosip.664 hiv-1 env trimer in complex with 8anc195 fab
no
viral protein/immune system
2019-01-21
2019-03-06
electron microscopy
3.9
N.A.
N.A.
30787293
10.1038/s41467-019-08825-7
0
auth_asym_id
VH:VL
IGHV1
IGKV1
K
L
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISV
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVK
14.591544
13.318017
244
215
130
108
130
108
51
8anc195 g52k5 heavy chain, ig gamma-1 chain
8anc195 g52k5 light chain
homo sapiens
homo sapiens
I;J
protein;protein
t/f100 env gp120;t/f100 env gp41
human immunodeficiency virus 1;human immunodeficiency virus 1
43;26
12;12
0.67;1.0
HL
train
6j9o_H_L
6j9o
crystal structure of a free scfv molecule from a group 2 influenza a viruses ha binding antibody af4h1k1
no
antiviral protein
2019-01-23
2020-01-29
x-ray diffraction
1.4
0.192
0.176
30993000
10.1038/s41421-019-0086-x
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
L
GSQVQLVESGGGVVQPGTSLRLSCEASGFTSSAYAMHWVRQAPGKGLEWVAVITFDGGYQYYADSVKGRFTISRDISRNTLHLHMNSLRAEDTAVYYCARDPLTKLLPFDWVSGGYFDYWGQGTLVTVSS
DIVMTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYRASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSFTFGQGTKVEIKR
GSQVQLVESGGGVVQPGTSLRLSCEASGFTSSAYAMHWVRQAPGKGLEWVAVITFDGGYQYYADSVKGRFTISRDISRNTLHLHMNSLRAEDTAVYYCARDPLTKLLPFDWVSGGYFDYWGQGTLVTVSS
DIVMTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYRASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSFTFGQGTKVEIKR
14.152029
13.248047
130
108
130
108
130
108
42
heavy chain of af4h1k1 scfv
light chain of af4h1k1 scfv
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
6jb2_A
6jb2
crystal structure of nanobody d3-l11 mutant y102a in complex with hen egg-white lysozyme
no
immune system/hydrolase
2019-01-25
2019-11-06
x-ray diffraction
1.5
0.165
0.125
31664051
10.1038/s41598-019-50722-y
0
auth_asym_id
VHH
IGHV3
N.A.
A
N.A.
DVQLVESGGGSVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRKAVPVRFALDQSSYDYWGQGTQVTVSSSAGHHHHHH
N.A.
DVQLVESGGGSVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRKAVPVRFALDQSSYDYWGQGTQVTVS
N.A.
13.54948
0
136
0
126
0
126
0
0
nanobody d3-l11
N.A.
camelus dromedarius
N.A.
B
protein
lysozyme c
gallus gallus
36
16
0.84
H_only
train
6jb5_A
6jb5
crystal structure of nanobody d3-l11 mutant y102a in complex with hen egg-white lysozyme (form ii)
no
immune system/hydrolase
2019-01-25
2019-11-06
x-ray diffraction
1.55
0.169
0.132
31664051
10.1038/s41598-019-50722-y
0
auth_asym_id
VHH
IGHV3
N.A.
A
N.A.
DVQLVESGGGSVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRKAVPVRFALDQSSYDYWGQGTQVTVSSSAGHHHHHH
N.A.
DVQLVESGGGSVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRKAVPVRFALDQSSYDYWGQGTQVTVS
N.A.
13.526457
0
136
0
126
0
126
0
0
nanobody d3-l11
N.A.
camelus dromedarius
N.A.
B
protein
lysozyme c
gallus gallus
36
16
0.89
H_only
train
6jb8_A
6jb8
crystal structure of nanobody d3-l11 in complex with hen egg-white lysozyme
no
immune system/hydrolase
2019-01-25
2019-11-06
x-ray diffraction
1.65
0.207
0.169
31664051
10.1038/s41598-019-50722-y
0
auth_asym_id
VHH
IGHV3
N.A.
A
N.A.
DVQLVESGGGSVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRKYVPVRFALDQSSYDYWGQGTQVTVSSSAGHHHHHH
N.A.
VQLVESGGGSVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRKYVPVRFALDQSSYDYWGQGTQVTVS
N.A.
13.454965
0
136
0
125
0
125
0
0
nanobody d3-l11
N.A.
camelus dromedarius
N.A.
B
protein
lysozyme c
gallus gallus
43
18
0.9
H_only
train
6jb9_A
6jb9
crystal structure of nanobody d3-l11 (unbound form)
no
immune system
2019-01-25
2019-11-06
x-ray diffraction
1.15
0.129
0.102
31664051
10.1038/s41598-019-50722-y
0
auth_asym_id
VHH
IGHV3
N.A.
A
N.A.
SDVQLVESGGGSVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRKYVPVRFALDQSSYDYWGQGTQVTVSS
N.A.
SDVQLVESGGGSVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRKYVPVRFALDQSSYDYWGQGTQVTVSS
N.A.
13.704787
0
128
0
128
0
128
0
0
nanobody d3-l11
N.A.
camelus dromedarius
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
6jbt_H_L
6jbt
complex structure of toripalimab-fab and pd-1
no
immune system
2019-01-26
2019-06-19
x-ray diffraction
2.47
0.252
0.201
30892132
10.1080/19420862.2019.1596513
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
H
L
QGQLVQSGAEVKKPGASVKVSCKASGYTFTDYEMHWVRQAPIHGLEWIGVIESETGGTAYNQKFKGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREGITTVATTYYWYFDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV
DVVMTQSPLSLPVTLGQPASISCRSSQSIVHSNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHVPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QGQLVQSGAEVKKPGASVKVSCKASGYTFTDYEMHWVRQAPIHGLEWIGVIESETGGTAYNQKFKGRVTITADKSTSTAYMELSSLRSEDTAVYYCAREGITTVATTYYWYFDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV
DVVMTQSPLSLPVTLGQPASISCRSSQSIVHSNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHVPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.185999
23.367592
223
219
217
218
223
218
96
heavy chain
light chain
mus musculus
mus musculus
F
protein
programmed cell death protein 1
homo sapiens
51
24
0.77
HL
train