PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6whc_N | 6whc | cryoem structure of the glucagon receptor with a dual-agonist peptide | no | membrane protein | 2020-04-07 | 2020-05-27 | electron microscopy | 3.4 | N.A. | N.A. | 32371397 | 10.1074/jbc.RA120.013793 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.832789 | 0 | 138 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 47;32 | 12;11 | 0.52;0.65 | H_only | train |
6whk_C_B | 6whk | minimally mutated anti-influenza broadly neutralizing antibody | no | viral protein/immune system | 2020-04-08 | 2021-04-14 | x-ray diffraction | 2.6 | 0.268 | 0.218 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV1 | C | B | ASEVQLVESGGGLVQPGRSLRLSCTASGFTFGDYGMSWFRQAPGKGLEWVGFIRSKVYGGTTEYAASVKGRFIISRDDSKSIAYLQMNSLKTEDTAVYYCTRDWVRDIILLPALHLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH | ASQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWFQQLPGTAPKLLIYDDDKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSRLSAGVVFGGGTKLTVLGQPKGAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYGMSWFRQAPGKGLEWVGFIRSKVYGGTTEYAASVKGRFIISRDDSKSIAYLQMNSLKTEDTAVYYCTRDWVRDIILLPALHLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | VLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWFQQLPGTAPKLLIYDDDKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSRLSAGVVFGGGTKLTVLGQPKGAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 20.764574 | 23.52743 | 240 | 219 | 222 | 211 | 227 | 211 | 88 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | A | protein | hemagglutinin ha1 chain | influenza a virus (a/beijing/262/1995(h1n1)) | 46 | 21 | 0.91 | HL | train |
6wi9_N | 6wi9 | human secretin receptor gs complex | no | membrane protein | 2020-04-09 | 2020-08-12 | electron microscopy | 4.3 | N.A. | N.A. | 32811827 | 10.1038/s41467-020-17791-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.996531 | 0 | 138 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 45;32 | 12;11 | 0.57;0.69 | H_only | train |
6wio_A_B | 6wio | fab antigen complex | no | cytokine/immune system | 2020-04-10 | 2020-09-23 | x-ray diffraction | 2.17 | 0.227 | 0.208 | 32915778 | 10.1371/journal.pone.0232311 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | A | B | EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYWMNWVRQAPGKGLEWVAAINQDGSEKYYVGSVKGRFTISRDNAKNSLYLQMNSLRVEDTAVYYCVRDYYDILTDYYIHYWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPCTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYWMNWVRQAPGKGLEWVAAINQDGSEKYYVGSVKGRFTISRDNAKNSLYLQMNSLRVEDTAVYYCVRDYYDILTDYYIHYWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPCTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | 23.218035 | 22.865492 | 230 | 213 | 230 | 213 | 230 | 213 | 89 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | C | protein | interleukin-17a | homo sapiens | 31 | 13 | 0.68 | HL | train |
6wik_D_C | 6wik | cryo-em structure of slc40/ferroportin with fab in the presence of hepcidin | no | membrane protein | 2020-04-10 | 2020-11-11 | electron microscopy | 3.4 | N.A. | N.A. | 33173040 | 10.1038/s41467-020-19458-6 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | D | C | MKCSWVIFFLMAVVTGVNSEVQLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKERPEQGLEWIGWIDPENGNTIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARKRGYYGPYFDYWGQGTTLTVSSKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSGLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPA | DIVMTQSQKFMSTSVGDRVSITCKASQNVGTAVAWYQKKPGQSPKLLIYSASNRYSGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYGSYPLTFGSGTKLEIKEAEAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | EVQLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKERPEQGLEWIGWIDPENGNTIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARKRGYYGPYFDYWGQGTTLTVSSKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSGLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPA | DIVMTQSQKFMSTSVGDRVSITCKASQNVGTAVAWYQKKPGQSPKLLIYSASNRYSGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYGSYPLTFGSGTKLEIKEAEAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | 23.685532 | 23.042095 | 238 | 213 | 219 | 213 | 219 | 213 | 100 | 11f9 fab heavy-chain | 11f9 fab light-chain | mus musculus | mus musculus | A | protein | solute carrier family 40 protein | carlito syrichta | 54 | 24 | 0.86 | HL | train |
6wiy_H_L | 6wiy | crystal structure of fab 54-1g05 | no | immune system | 2020-04-11 | 2020-07-01 | x-ray diffraction | 1.65 | 0.188 | 0.158 | 32619441 | 10.1016/j.chom.2020.06.003 | 0 | auth_asym_id | FabH:FabL | IGHV6 | IGKV3 | H | L | QVQLQQSGPRLVKPSQTLSLTCAISGDSVSSSSAVWTWIRQSPSRGLEWLGRTYYRSKWYDDYAVSVQGRITINPDTSKNQISLQLNSVTPDDTAVYYCARSSINIFGVFVMAMDVWGQGTAVTVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCKSC | EIVLTQSPGTLSLSPGERVTLSCRASQTVYNSYLAWYQQKPGQAPTLLIYGTSTRATGVPDRFSGSGSGTVFTLTISRLEPEDFAVYFCQQYSTSPRALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECC | QVQLQQSGPRLVKPSQTLSLTCAISGDSVSSSSAVWTWIRQSPSRGLEWLGRTYYRSKWYDDYAVSVQGRITINPDTSKNQISLQLNSVTPDDTAVYYCARSSINIFGVFVMAMDVWGQGTAVTVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | EIVLTQSPGTLSLSPGERVTLSCRASQTVYNSYLAWYQQKPGQAPTLLIYGTSTRATGVPDRFSGSGSGTVFTLTISRLEPEDFAVYFCQQYSTSPRALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.484514 | 23.7238 | 233 | 218 | 227 | 216 | 227 | 216 | 89 | fab 54-1g05 heavy chain | fab 54-1g05 light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
6wiz_H_L | 6wiz | crystal structure of fab 54-1g05 bound to h1 influenza hemagglutinin | no | immune system | 2020-04-11 | 2020-07-01 | x-ray diffraction | 4.2 | 0.389 | 0.323 | 32619441 | 10.1016/j.chom.2020.06.003 | 0 | auth_asym_id | FabH:FabL | IGHV6 | IGKV3 | H | L | QVQLQQSGPRLVKPSQTLSLTCAISGDSVSSSSAVWTWIRQSPSRGLEWLGRTYYRSKWYDDYAVSVQGRITINPDTSKNQISLQLNSVTPDDTAVYYCARSSINIFGVFVMAMDVWGQGTAVTVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVLTQSPGTLSLSPGERVTLSCRASQTVYNSYLAWYQQKPGQAPTLLIYGTSTRATGVPDRFSGSGSGTVFTLTISRLEPEDFAVYFCQQYSTSPRALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQSGPRLVKPSQTLSLTCAISGDSVSSSSAVWTWIRQSPSRGLEWLGRTYYRSKWYDDYAVSVQGRITINPDTSKNQISLQLNSVTPDDTAVYYCARSSINIFGVFVMAMDVWGQGTAVTVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | EIVLTQSPGTLSLSPGERVTLSCRASQTVYNSYLAWYQQKPGQAPTLLIYGTSTRATGVPDRFSGSGSGTVFTLTISRLEPEDFAVYFCQQYSTSPRALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.421505 | 23.509743 | 230 | 217 | 227 | 216 | 227 | 216 | 97 | fab 54-1g05 heavy chain | fab 54-1g05 light chain | homo sapiens | homo sapiens | A;B | protein;protein | hemagglutinin ha1;hemagglutinin ha2 | influenza a virus;influenza a virus | 14;41 | 6;20 | 1.0;1.0 | HL | train |
6wj0_H_L | 6wj0 | crystal structure of fab 54-4h03 | no | immune system | 2020-04-11 | 2020-07-01 | x-ray diffraction | 1.8 | 0.203 | 0.163 | 32619441 | 10.1016/j.chom.2020.06.003 | 0 | auth_asym_id | FabH:FabL | IGHV6 | IGKV3 | H | L | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSVAWNWIRQSPSRGLEWLGRTYFRSKWYTDYAESLKSRMTINPDTSKNEFSLHLKSVTSDDTAVYYCVRGIIFNWPLGGWSFDLWGRGTLVSVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVLTQSPGTLSLSPGDSATLSCRASQSVASSYLAWYQQKPGQSPRLLIYATINRAADIPDRFSGSGSGTDFALTISRLEPEDFAVYYCQQFDSSSMYTFGQGTKLEITRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGEC | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSVAWNWIRQSPSRGLEWLGRTYFRSKWYTDYAESLKSRMTINPDTSKNEFSLHLKSVTSDDTAVYYCVRGIIFNWPLGGWSFDLWGRGTLVSVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | EIVLTQSPGTLSLSPGDSATLSCRASQSVASSYLAWYQQKPGQSPRLLIYATINRAADIPDRFSGSGSGTDFALTISRLEPEDFAVYYCQQFDSSSMYTFGQGTKLEITRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGE | 21.772295 | 23.580053 | 230 | 216 | 228 | 215 | 228 | 215 | 89 | fab 54-4h03 heavy chain | fab 54-4h03 light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7bw0_N | 7bw0 | active human tgr5 complex with a synthetic agonist 23h | no | membrane protein | 2020-04-12 | 2020-09-02 | electron microscopy | 3.9 | N.A. | N.A. | 32747649 | 10.1038/s41392-020-00262-z | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 14.035958 | 0 | 157 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody nb35 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short,guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 48;34 | 16;10 | 0.59;0.67 | H_only | train |
6yo6_C | 6yo6 | structure of ic3b1 | no | immune system | 2020-04-14 | 2021-02-24 | x-ray diffraction | 6 | 0.266 | 0.241 | 34117107 | 10.4049/jimmunol.2001208 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | MQVQLVETGGGLVQAGGSLRLSCAASGSIFSLNAMGWFRQAPGKEREFVATINRSGGRTYYADSVKGRFTISRDNGKNMVYLQMHSLKPEDTAIYYCAAGTGWSPQTDNEYNYWGQGTQVTVSSHHHHHH | N.A. | QVQLVETGGGLVQAGGSLRLSCAASGSIFSLNAMGWFRQAPGKEREFVATINRSGGRTYYADSVKGRFTISRDNGKNMVYLQMHSLKPEDTAIYYCAAGTGWSPQTDNEYNYWGQGTQVTVSSH | N.A. | 13.74659 | 0 | 130 | 0 | 124 | 0 | 124 | 0 | 0 | hc3nb1 | N.A. | lama glama | N.A. | B | protein | ic3b1 beta chain | homo sapiens | 35 | 13 | 0.72 | H_only | train |
6wjl_F_J | 6wjl | crystal structure of glypican-2 core protein in complex with d3 fab | yes | oncoprotein/immune system | 2020-04-14 | 2021-04-21 | x-ray diffraction | 3.3 | 0.317 | 0.278 | 34337560 | 10.1016/j.xcrm.2021.100344 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | F | J | EVQLVETGGGVVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARESGYDYVFDYWGQGTLVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSTLSAFVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVETGGGVVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARESGYDYVFDYWGQGTLVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSTLSAFVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.927452 | 22.780603 | 220 | 214 | 218 | 213 | 220 | 213 | 97 | d3 fab heavy chain | d3 fab light chain | homo sapiens | homo sapiens | E | protein | glypican-2 | homo sapiens | 60 | 22 | 0.69 | HL | train |
6wjl_H_L | 6wjl | crystal structure of glypican-2 core protein in complex with d3 fab | yes | oncoprotein/immune system | 2020-04-14 | 2021-04-21 | x-ray diffraction | 3.3 | 0.317 | 0.278 | 34337560 | 10.1016/j.xcrm.2021.100344 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVETGGGVVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARESGYDYVFDYWGQGTLVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSTLSAFVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVETGGGVVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARESGYDYVFDYWGQGTLVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSTLSAFVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.913647 | 22.793423 | 220 | 214 | 218 | 213 | 220 | 213 | 99 | d3 fab heavy chain | d3 fab light chain | homo sapiens | homo sapiens | G | protein | glypican-2 | homo sapiens | 51 | 19 | 0.68 | HL | train |
6yor_B_C | 6yor | structure of the sars-cov-2 spike s1 protein in complex with cr3022 fab | no | viral protein | 2020-04-15 | 2020-04-29 | electron microscopy | 3.3 | N.A. | N.A. | 32585135 | 10.1016/j.chom.2020.06.010 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | B | C | TQMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | TQMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.710608 | 24.29169 | 229 | 220 | 216 | 219 | 220 | 219 | 100 | igg h chain | igg l chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 58 | 23 | 0.74 | HL | train |
6yor_H_L | 6yor | structure of the sars-cov-2 spike s1 protein in complex with cr3022 fab | no | viral protein | 2020-04-15 | 2020-04-29 | electron microscopy | 3.3 | N.A. | N.A. | 32585135 | 10.1016/j.chom.2020.06.010 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | TQMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | TQMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.650927 | 24.087984 | 229 | 220 | 216 | 219 | 220 | 219 | 100 | igg h chain | igg l chain | homo sapiens | homo sapiens | E | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 58 | 23 | 0.74 | HL | train |
6wk4_A_B | 6wk4 | fab fragment of anti-human lag3 antibody (13e2) | no | immune system | 2020-04-15 | 2021-04-21 | x-ray diffraction | 2.1 | 0.228 | 0.186 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGKV4 | A | B | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGLGWIRQPSGKGLEWLTHIWWDDIKRYNPDLRSRLTISKDTSSSQIFLKIASVDTADTATYYCARIVEGSYSSSYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTAGWSHPQFEK | DIVMTQPHKFMSTSVEDRVTITCKASQDVIFDVAWYQQKPGQSPKLLIYSASSRVSGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPYTFGGGTTLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKYQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGLGWIRQPSGKGLEWLTHIWWDDIKRYNPDLRSRLTISKDTSSSQIFLKIASVDTADTATYYCARIVEGSYSSSYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIVMTQPHKFMSTSVEDRVTITCKASQDVIFDVAWYQQKPGQSPKLLIYSASSRVSGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPYTFGGGTTLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKYQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.518208 | 22.360397 | 239 | 214 | 219 | 212 | 224 | 212 | 91 | 13e2 fab heavy chain | 13e2 fab light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
6wkm_H_L | 6wkm | fab fragment of anti-human lag3 antibody (22d2) | no | immune system | 2020-04-16 | 2021-04-21 | x-ray diffraction | 2.1 | 0.235 | 0.203 | 37619561 | 10.1016/j.str.2023.07.013 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV7 | H | L | EVLLLQSGPELVKPGTSVKIPCKASGYTFTDYNVDWVKQRHGKGLEWIGDINPNNGGTIYSQKFKGKATLTVDKSSSTAFMELRSLTSEDTAVYFCARNYRWFGAMDHWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTAGWSHPQFEK | DIVLTQSPASLAVSPGQRATISCKASQSLDYEGDSDMNWYQQKPGQPPRLLISGASNLESGIPARFSGSGSGTDFTVNIHPVEEEDAATYYCQQSTEDPRTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKYQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVLLLQSGPELVKPGTSVKIPCKASGYTFTDYNVDWVKQRHGKGLEWIGDINPNNGGTIYSQKFKGKATLTVDKSSSTAFMELRSLTSEDTAVYFCARNYRWFGAMDHWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | DIVLTQSPASLAVSPGQRATISCKASQSLDYEGDSDMNWYQQKPGQPPRLLISGASNLESGIPARFSGSGSGTDFTVNIHPVEEEDAATYYCQQSTEDPRTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKYQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.850462 | 23.662745 | 235 | 218 | 219 | 218 | 223 | 218 | 102 | 22d2 fab heavy chain | 22d2 fab light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7bxa_B_C | 7bxa | crystal structure of pd-1 in complex with tislelizumab fab | yes | immune system | 2020-04-18 | 2020-06-10 | x-ray diffraction | 3.32 | 0.299 | 0.243 | 32446372 | 10.1016/j.bbrc.2020.04.121 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV4 | B | C | QVQLQESGPGLVKPSETLSLTCTVSGFSLTSYGVHWIRQPPGKGLEWIGVIYADGSTNYNPSLKSRVTISKDTSKNQVSLKLSSVTAADTAVYYCARAYGNYWYIDVWGQGTTVTVSSASTKGPSVFPLAPCSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYCDKTHHHHHH | DIVMTQSPDSLAVSLGERATINCKSSESVSNDVAWYQQKPGQPPKLLINYAFHRFTGVPDRFSGSGYGTDFTLTISSLQAEDVAVYYCHQAYSSPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCTVSGFSLTSYGVHWIRQPPGKGLEWIGVIYADGSTNYNPSLKSRVTISKDTSKNQVSLKLSSVTAADTAVYYCARAYGNYWYIDVWGQGTTVTVSSASTKGPSVFPLAPCSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKY | DIVMTQSPDSLAVSLGERATINCKSSESVSNDVAWYQQKPGQPPKLLINYAFHRFTGVPDRFSGSGYGTDFTLTISSLQAEDVAVYYCHQAYSSPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.179747 | 23.435352 | 230 | 214 | 212 | 213 | 220 | 213 | 100 | heavy chain | light chain | homo sapiens | homo sapiens | A | protein | programmed cell death protein 1 | homo sapiens | 41 | 16 | 0.84 | HL | train |
7bxa_H_L | 7bxa | crystal structure of pd-1 in complex with tislelizumab fab | yes | immune system | 2020-04-18 | 2020-06-10 | x-ray diffraction | 3.32 | 0.299 | 0.243 | 32446372 | 10.1016/j.bbrc.2020.04.121 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV4 | H | L | QVQLQESGPGLVKPSETLSLTCTVSGFSLTSYGVHWIRQPPGKGLEWIGVIYADGSTNYNPSLKSRVTISKDTSKNQVSLKLSSVTAADTAVYYCARAYGNYWYIDVWGQGTTVTVSSASTKGPSVFPLAPCSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYCDKTHHHHHH | DIVMTQSPDSLAVSLGERATINCKSSESVSNDVAWYQQKPGQPPKLLINYAFHRFTGVPDRFSGSGYGTDFTLTISSLQAEDVAVYYCHQAYSSPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCTVSGFSLTSYGVHWIRQPPGKGLEWIGVIYADGSTNYNPSLKSRVTISKDTSKNQVSLKLSSVTAADTAVYYCARAYGNYWYIDVWGQGTTVTVSSASTKGPSVFPLAPCSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK | DIVMTQSPDSLAVSLGERATINCKSSESVSNDVAWYQQKPGQPPKLLINYAFHRFTGVPDRFSGSGYGTDFTLTISSLQAEDVAVYYCHQAYSSPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.215878 | 23.287455 | 230 | 214 | 211 | 211 | 219 | 211 | 97 | heavy chain | light chain | homo sapiens | homo sapiens | P | protein | programmed cell death protein 1 | homo sapiens | 41 | 17 | 0.81 | HL | train |
7bxv_H_L | 7bxv | 11a1 antibody-peptide complex | no | immune system | 2020-04-21 | 2021-04-21 | x-ray diffraction | 1.75 | 0.194 | 0.166 | N.A. | 10.1101/2021.04.07.438832 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV2 | H | L | LIQLVQSGPEVKKPGETVKISCTASGYTFTNYVIHWVKQAPGKGLKWMGWIYTDTGEPTYADDFKGRFAFSLETSANTAYLQINNLKNEDMTTYFCAREAYPNYFDYWGHGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DVVMTQTPLSLTVSLGDQASISCRSSQSLVHSNGNAYLHWYLQKPGQSPKVLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | LIQLVQSGPEVKKPGETVKISCTASGYTFTNYVIHWVKQAPGKGLKWMGWIYTDTGEPTYADDFKGRFAFSLETSANTAYLQINNLKNEDMTTYFCAREAYPNYFDYWGHGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DVVMTQTPLSLTVSLGDQASISCRSSQSLVHSNGNAYLHWYLQKPGQSPKVLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 22.002195 | 23.443428 | 218 | 217 | 217 | 217 | 218 | 217 | 98 | fab of the 11a1 antibody h chain | fab of the 11a1 antibody l chain | mus musculus | mus musculus | A | peptide | tyr-glu-val-his-his | homo sapiens | 24 | 14 | 0.74 | HL | train |
6wn4_A_B | 6wn4 | structural basis for the binding of monoclonal antibody 5d2 to the tryptophan-rich lipid-binding loop in lipoprotein lipase | no | immune system | 2020-04-22 | 2020-07-29 | x-ray diffraction | 2.8 | 0.243 | 0.208 | 32690595 | 10.1194/jlr.RA120000993 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | A | B | SKVQLQQSGAELVKPGASVKLSCKASGYTFTEYIIHWVKQKSGQGLEWIGWFYPGSGNIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHEDRNYYSYWDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | GQIVLTQSPALMSASPGEKVTMTCSASSSVSNMYWYQQKPRSSPKPWIYLTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | KVQLQQSGAELVKPGASVKLSCKASGYTFTEYIIHWVKQKSGQGLEWIGWFYPGSGNIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHEDRNYYSYWDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | QIVLTQSPALMSASPGEKVTMTCSASSSVSNMYWYQQKPRSSPKPWIYLTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 22.792461 | 22.56526 | 222 | 214 | 214 | 208 | 220 | 210 | 94 | 5d2 fab heavy chain | 5d2 fab light chain | mus musculus | mus musculus | C | peptide | lipoprotein lipase peptide | homo sapiens | 29 | 14 | 0.78 | HL | train |
6wn4_H_L | 6wn4 | structural basis for the binding of monoclonal antibody 5d2 to the tryptophan-rich lipid-binding loop in lipoprotein lipase | no | immune system | 2020-04-22 | 2020-07-29 | x-ray diffraction | 2.8 | 0.243 | 0.208 | 32690595 | 10.1194/jlr.RA120000993 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | SKVQLQQSGAELVKPGASVKLSCKASGYTFTEYIIHWVKQKSGQGLEWIGWFYPGSGNIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHEDRNYYSYWDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | GQIVLTQSPALMSASPGEKVTMTCSASSSVSNMYWYQQKPRSSPKPWIYLTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | KVQLQQSGAELVKPGASVKLSCKASGYTFTEYIIHWVKQKSGQGLEWIGWFYPGSGNIKYNEKFKDKATLTADKSSSTVYMELSRLTSEDSAVYFCARHEDRNYYSYWDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | QIVLTQSPALMSASPGEKVTMTCSASSSVSNMYWYQQKPRSSPKPWIYLTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | 22.770998 | 23.420763 | 222 | 214 | 221 | 212 | 221 | 212 | 100 | 5d2 fab heavy chain | 5d2 fab light chain | mus musculus | mus musculus | D | peptide | lipoprotein lipase peptide | homo sapiens | 31 | 17 | 0.81 | HL | train |
6wn1_B_C | 6wn1 | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 241242 | no | cell invasion | 2020-04-22 | 2021-01-27 | x-ray diffraction | 3.15 | 0.283 | 0.251 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | B | C | TGVHSEVQLLESGGGLVQPGGSLRLSCAVSGFTFRNYALSWVRQAPGKGLDWVSTISASGGATYYADSVKGHFTISRDNSKNILYLDMKSLRAEDTAIYYCARDGGSYTPYFFLDSWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGSVTSYELTQPASVSVAPGQTAQITCGGNSIGRKSIHWYQHKPGQAPVLVISYDSDRPSGIPERFSGSNSGNTATLTISKVEAGDEADFYCQVRDSDNDHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLLESGGGLVQPGGSLRLSCAVSGFTFRNYALSWVRQAPGKGLDWVSTISASGGATYYADSVKGHFTISRDNSKNILYLDMKSLRAEDTAIYYCARDGGSYTPYFFLDSWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | YELTQPASVSVAPGQTAQITCGGNSIGRKSIHWYQHKPGQAPVLVISYDSDRPSGIPERFSGSNSGNTATLTISKVEAGDEADFYCQVRDSDNDHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 24.311209 | 22.868185 | 237 | 219 | 221 | 211 | 225 | 211 | 92 | 241242 fab heavy chain | 241242 fab light chain | homo sapiens | homo sapiens | A | protein | reticulocyte binding protein 2b | plasmodium vivax sal-1 | 60 | 23 | 0.77 | HL | train |
6wn1_E_F | 6wn1 | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 241242 | no | cell invasion | 2020-04-22 | 2021-01-27 | x-ray diffraction | 3.15 | 0.283 | 0.251 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV3 | E | F | TGVHSEVQLLESGGGLVQPGGSLRLSCAVSGFTFRNYALSWVRQAPGKGLDWVSTISASGGATYYADSVKGHFTISRDNSKNILYLDMKSLRAEDTAIYYCARDGGSYTPYFFLDSWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGSVTSYELTQPASVSVAPGQTAQITCGGNSIGRKSIHWYQHKPGQAPVLVISYDSDRPSGIPERFSGSNSGNTATLTISKVEAGDEADFYCQVRDSDNDHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLLESGGGLVQPGGSLRLSCAVSGFTFRNYALSWVRQAPGKGLDWVSTISASGGATYYADSVKGHFTISRDNSKNILYLDMKSLRAEDTAIYYCARDGGSYTPYFFLDSWGQGALVTV | YELTQPASVSVAPGQTAQITCGGNSIGRKSIHWYQHKPGQAPVLVISYDSDRPSGIPERFSGSNSGNTATLTISKVEAGDEADFYCQVRDSDNDHVVFGGGTKLTVLGQPK | 13.514513 | 13.910296 | 237 | 219 | 119 | 111 | 119 | 111 | 41 | 241242 fab heavy chain | 241242 fab light chain | homo sapiens | homo sapiens | D | protein | reticulocyte binding protein 2b | plasmodium vivax sal-1 | 57 | 23 | 0.77 | HL | train |
6ysq_G | 6ysq | the hc4nb8 complement inhibitory nanobody in complex with c4b | yes | immune system | 2020-04-23 | 2020-06-24 | x-ray diffraction | 3.3 | 0.272 | 0.221 | 32769120 | 10.4049/jimmunol.2000528 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | QVQLVESGGGLVQTGDSLRLSCAASGRTFSRYAMGWFRQAPGKERELVAAINWSGGSTYYADFAKGRFTISRDNAKNMLYLRMSSLKPEDTAVYYCAAGGPEVEITRANEYDYWGQGTQVTVSSLEHHHHHH | N.A. | QVQLVESGGGLVQTGDSLRLSCAASGRTFSRYAMGWFRQAPGKERELVAAINWSGGSTYYADFAKGRFTISRDNAKNMLYLRMSSLKPEDTAVYYCAAGGPEVEITRANEYDYWGQGTQVTVSS | N.A. | 13.924986 | 0 | 132 | 0 | 124 | 0 | 124 | 0 | 0 | hc4nb8 nanobody | N.A. | escherichia coli | N.A. | B;C | protein;protein | complement c4 beta chain;complement c4-a alpha chain | homo sapiens;homo sapiens | 38;41 | 8;15 | 0.57;0.71 | H_only | train |
6ysq_H | 6ysq | the hc4nb8 complement inhibitory nanobody in complex with c4b | yes | immune system | 2020-04-23 | 2020-06-24 | x-ray diffraction | 3.3 | 0.272 | 0.221 | 32769120 | 10.4049/jimmunol.2000528 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | QVQLVESGGGLVQTGDSLRLSCAASGRTFSRYAMGWFRQAPGKERELVAAINWSGGSTYYADFAKGRFTISRDNAKNMLYLRMSSLKPEDTAVYYCAAGGPEVEITRANEYDYWGQGTQVTVSSLEHHHHHH | N.A. | QVQLVESGGGLVQTGDSLRLSCAASGRTFSRYAMGWFRQAPGKERELVAAINWSGGSTYYADFAKGRFTISRDNAKNMLYLRMSSLKPEDTAVYYCAAGGPEVEITRANEYDYWGQGTQVTVSS | N.A. | 13.955783 | 0 | 132 | 0 | 124 | 0 | 124 | 0 | 0 | hc4nb8 nanobody | N.A. | escherichia coli | N.A. | D | protein | complement c4-a alpha chain | homo sapiens | 45 | 16 | 0.7 | H_only | train |
6wno_B_C | 6wno | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 243244 | no | cell invasion | 2020-04-23 | 2021-01-27 | x-ray diffraction | 3.35 | 0.283 | 0.245 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | B | C | TGVHSQVQLVESGGGVVQSGKSLRVSCAASGFTFSSYGMHWVRQAPGKGLEWVAFISYDGDNKYSADSVKGRLTISRDNSKNTLYLQMNSLRPEDTAVYYCAKESNYGENAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGSWAQSALTQPRSVSGSPGQSVTISCTGTSSDVGFYNFVSWYQHHPGKAPKLIIYDVSERPSGVPDRFSGSKSGNTASLSISGLQPEDEADYYCCSYAGTYTFVFGSGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGGGVVQSGKSLRVSCAASGFTFSSYGMHWVRQAPGKGLEWVAFISYDGDNKYSADSVKGRLTISRDNSKNTLYLQMNSLRPEDTAVYYCAKESNYGENAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | ALTQPRSVSGSPGQSVTISCTGTSSDVGFYNFVSWYQHHPGKAPKLIIYDVSERPSGVPDRFSGSKSGNTASLSISGLQPEDEADYYCCSYAGTYTFVFGSGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 22.986753 | 20.83306 | 235 | 221 | 214 | 210 | 219 | 210 | 109 | 243244 fab heavy chain | 243244 fab light chain | homo sapiens | homo sapiens | A | protein | plasmodium vivax reticulocyte binding protein 2b | plasmodium vivax (strain salvador i) | 59 | 23 | 0.79 | HL | train |
6wno_E_F | 6wno | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 243244 | no | cell invasion | 2020-04-23 | 2021-01-27 | x-ray diffraction | 3.35 | 0.283 | 0.245 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | E | F | TGVHSQVQLVESGGGVVQSGKSLRVSCAASGFTFSSYGMHWVRQAPGKGLEWVAFISYDGDNKYSADSVKGRLTISRDNSKNTLYLQMNSLRPEDTAVYYCAKESNYGENAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGSWAQSALTQPRSVSGSPGQSVTISCTGTSSDVGFYNFVSWYQHHPGKAPKLIIYDVSERPSGVPDRFSGSKSGNTASLSISGLQPEDEADYYCCSYAGTYTFVFGSGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGGGVVQSGKSLRVSCAASGFTFSSYGMHWVRQAPGKGLEWVAFISYDGDNKYSADSVKGRLTISRDNSKNTLYLQMNSLRPEDTAVYYCAKESNYGENAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SALTQPRSVSGSPGQSVTISCTGTSSDVGFYNFVSWYQHHPGKAPKLIIYDVSERPSGVPDRFSGSKSGNTASLSISGLQPEDEADYYCCSYAGTYTFVFGSGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 23.414434 | 20.623985 | 235 | 221 | 220 | 212 | 220 | 212 | 113 | 243244 fab heavy chain | 243244 fab light chain | homo sapiens | homo sapiens | D | protein | plasmodium vivax reticulocyte binding protein 2b | plasmodium vivax (strain salvador i) | 60 | 23 | 0.79 | HL | train |
7byr_H_L | 7byr | bd23-fab in complex with the s ectodomain trimer | yes | viral protein | 2020-04-24 | 2020-06-10 | electron microscopy | 3.84 | N.A. | N.A. | 32425270 | 10.1016/j.cell.2020.05.025 | 0 | auth_asym_id | VH:VL | IGHV7 | IGKV1 | H | L | QVQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARPQGGSSWYRDYYYGMDVWGQGTTVTVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPYTFGQGTKLEIK | VQLVQSGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARPQGGSSWYRDYYYGMDVWGQGTTVTV | IQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPYTFGQGTKLEI | 13.101474 | 12.941118 | 126 | 107 | 102 | 105 | 123 | 105 | 42 | ab23-fab-heavy chain | ab23-fab-light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 41 | 7 | 0.33 | HL | train |
6wo3_H_L | 6wo3 | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 6a bound to broadly neutralizing antibody u1 | no | immune system/viral protein | 2020-04-24 | 2020-08-19 | x-ray diffraction | 2.38 | 0.26 | 0.23 | 32754640 | 10.1126/sciadv.abb5642 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | EVQLLEQSGPEVKRPGTSVKMSCKISGGASITQAMSWVRQAPGQGLEWMGGITPIFGTVNYAQKILGRVTITADEDTVSLELSSLKSEDTAVYYCAREVNLKTWNLAHPNVFDVWGQGTMLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | LTLTQSPSSLSASVGDRVTITCRASQSISSFLNWYQQKPGKAPKLLIYAASSLQSGVPPRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLLEQSGPEVKRPGTSVKMSCKISGGASITQAMSWVRQAPGQGLEWMGGITPIFGTVNYAQKILGRVTITADEDTVSLELSSLKSEDTAVYYCAREVNLKTWNLAHPNVFDVWGQGTMLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | LTLTQSPSSLSASVGDRVTITCRASQSISSFLNWYQQKPGKAPKLLIYAASSLQSGVPPRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.935831 | 23.435122 | 230 | 213 | 223 | 211 | 223 | 211 | 102 | fab u1 heavy chain | fab u1 light chain | homo sapiens | homo sapiens | E | protein | envelope glycoprotein e2 | recombinant hepatitis c virus hk6a/jfh-1 | 31 | 13 | 0.81 | HL | train |
6wo5_A_B | 6wo5 | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 1a bound to neutralizing antibody 212.1.1 and non neutralizing antibody e1 | no | immune system/viral protein | 2020-04-24 | 2020-08-19 | x-ray diffraction | 2.62 | 0.25 | 0.203 | 32754640 | 10.1126/sciadv.abb5642 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | A | B | EVQLLEQSGAELKKPGSSVKVSCKPSDGTFRAYTLSWVRQAPGQTLEWMGRIMPTVGITNYAQKFQGRVTISADMSTATAYMELSSLRSDDTAIYYCAKGPYVGLGEGFSEWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | IELELVLTQSPLSLPVTLGQPASISCRSTQSLVYSDGNTYLNWFHQRAGQPPRRLIYKVSNRDSGVPERFSGSGSGTDFTLKISRVEAEDVGIYYCMQGAHWPPTFGGGTKVEINRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | LLEQSGAELKKPGSSVKVSCKPSDGTFRAYTLSWVRQAPGQTLEWMGRIMPTVGITNYAQKFQGRVTISADMSTATAYMELSSLRSDDTAIYYCAKGPYVGLGEGFSEWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | IELELVLTQSPLSLPVTLGQPASISCRSTQSLVYSDGNTYLNWFHQRAGQPPRRLIYKVSNRDSGVPERFSGSGSGTDFTLKISRVEAEDVGIYYCMQGAHWPPTFGGGTKVEINRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.33657 | 24.04355 | 227 | 221 | 212 | 221 | 220 | 221 | 93 | fab e1 heavy chain | fab e1 light chain | homo sapiens | homo sapiens | E | protein | envelope glycoprotein e2 | hepatitis c virus (isolate h) | 47 | 20 | 0.8 | HL | train |
6wo5_H_L | 6wo5 | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 1a bound to neutralizing antibody 212.1.1 and non neutralizing antibody e1 | no | immune system/viral protein | 2020-04-24 | 2020-08-19 | x-ray diffraction | 2.62 | 0.25 | 0.203 | 32754640 | 10.1126/sciadv.abb5642 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGGTLSSYGISWVRQAPGQGLEWLGGSIPILGTSVYAQKFQGRVTMTADESTSTAHMELSSLRFDDTAIYYCAGVREGMAAISGKNAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGYGTEFTLTISSLQPEDVATYYCQQHDNLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGSSVKVSCKASGGTLSSYGISWVRQAPGQGLEWLGGSIPILGTSVYAQKFQGRVTMTADESTSTAHMELSSLRFDDTAIYYCAGVREGMAAISGKNAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGYGTEFTLTISSLQPEDVATYYCQQHDNLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.257124 | 23.363855 | 230 | 214 | 219 | 212 | 225 | 212 | 92 | fab 212.1.1 heavy chain | fab 212.1.1 light chain | homo sapiens | homo sapiens | E | protein | envelope glycoprotein e2 | hepatitis c virus (isolate h) | 46 | 21 | 0.88 | HL | train |
6wo5_C_D | 6wo5 | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 1a bound to neutralizing antibody 212.1.1 and non neutralizing antibody e1 | no | immune system/viral protein | 2020-04-24 | 2020-08-19 | x-ray diffraction | 2.62 | 0.25 | 0.203 | 32754640 | 10.1126/sciadv.abb5642 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | C | D | EVQLLEQSGAELKKPGSSVKVSCKPSDGTFRAYTLSWVRQAPGQTLEWMGRIMPTVGITNYAQKFQGRVTISADMSTATAYMELSSLRSDDTAIYYCAKGPYVGLGEGFSEWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | IELELVLTQSPLSLPVTLGQPASISCRSTQSLVYSDGNTYLNWFHQRAGQPPRRLIYKVSNRDSGVPERFSGSGSGTDFTLKISRVEAEDVGIYYCMQGAHWPPTFGGGTKVEINRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | LLEQSGAELKKPGSSVKVSCKPSDGTFRAYTLSWVRQAPGQTLEWMGRIMPTVGITNYAQKFQGRVTISADMSTATAYMELSSLRSDDTAIYYCAKGPYVGLGEGFSEWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | IELELVLTQSPLSLPVTLGQPASISCRSTQSLVYSDGNTYLNWFHQRAGQPPRRLIYKVSNRDSGVPERFSGSGSGTDFTLKISRVEAEDVGIYYCMQGAHWPPTFGGGTKVEINRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.301208 | 24.097528 | 227 | 221 | 216 | 219 | 219 | 219 | 100 | fab e1 heavy chain | fab e1 light chain | homo sapiens | homo sapiens | F | protein | envelope glycoprotein e2 | hepatitis c virus (isolate h) | 46 | 19 | 0.79 | HL | train |
6wo5_G_I | 6wo5 | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 1a bound to neutralizing antibody 212.1.1 and non neutralizing antibody e1 | no | immune system/viral protein | 2020-04-24 | 2020-08-19 | x-ray diffraction | 2.62 | 0.25 | 0.203 | 32754640 | 10.1126/sciadv.abb5642 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | G | I | QVQLVQSGAEVKKPGSSVKVSCKASGGTLSSYGISWVRQAPGQGLEWLGGSIPILGTSVYAQKFQGRVTMTADESTSTAHMELSSLRFDDTAIYYCAGVREGMAAISGKNAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGYGTEFTLTISSLQPEDVATYYCQQHDNLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGTLSSYGISWVRQAPGQGLEWLGGSIPILGTSVYAQKFQGRVTMTADESTSTAHMELSSLRFDDTAIYYCAGVREGMAAISGKNAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQGISNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGYGTEFTLTISSLQPEDVATYYCQQHDNLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.634703 | 23.279285 | 230 | 214 | 220 | 211 | 226 | 211 | 92 | fab 212.1.1 heavy chain | fab 212.1.1 light chain | homo sapiens | homo sapiens | F | protein | envelope glycoprotein e2 | hepatitis c virus (isolate h) | 40 | 18 | 0.86 | HL | train |
6woq_A_B | 6woq | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 1a bound to neutralizing antibody hc1am and non neutralizing antibody e1 | no | immune system/viral protein | 2020-04-25 | 2020-08-19 | x-ray diffraction | 3.67 | 0.277 | 0.227 | 32754640 | 10.1126/sciadv.abb5642 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | A | B | EVQLLEQSGAELKKPGSSVKVSCKPSDGTFRAYTLSWVRQAPGQTLEWMGRIMPTVGITNYAQKFQGRVTISADMSTATAYMELSSLRSDDTAIYYCAKGPYVGLGEGFSEWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | IELELVLTQSPLSLPVTLGQPASISCRSTQSLVYSDGNTYLNWFHQRAGQPPRRLIYKVSNRDSGVPERFSGSGSGTDFTLKISRVEAEDVGIYYCMQGAHWPPTFGGGTKVEINRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | LLEQSGAELKKPGSSVKVSCKPSDGTFRAYTLSWVRQAPGQTLEWMGRIMPTVGITNYAQKFQGRVTISADMSTATAYMELSSLRSDDTAIYYCAKGPYVGLGEGFSEWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ELVLTQSPLSLPVTLGQPASISCRSTQSLVYSDGNTYLNWFHQRAGQPPRRLIYKVSNRDSGVPERFSGSGSGTDFTLKISRVEAEDVGIYYCMQGAHWPPTFGGGTKVEINRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.514702 | 23.808905 | 227 | 221 | 215 | 217 | 220 | 217 | 105 | fab e1 heavy chain | fab e1 light chain | homo sapiens | homo sapiens | E | protein | envelope glycoprotein e2 | hepatitis c virus (isolate h) | 52 | 23 | 0.82 | HL | train |
6woq_J_K | 6woq | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 1a bound to neutralizing antibody hc1am and non neutralizing antibody e1 | no | immune system/viral protein | 2020-04-25 | 2020-08-19 | x-ray diffraction | 3.67 | 0.277 | 0.227 | 32754640 | 10.1126/sciadv.abb5642 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | J | K | QLQLVQSGAEVRKPGSSVKVSCKASGGTYNGEVISWVRQAPGEGLEWLGVFIPMFGIADYAQKFHGRVTISADRTTSTTYMELSSLRSEDTAIYYCAKVLQVGRNLVVRPLDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | EIVLTQSPGILSLSPGERATLSCRASRTISRTHLAWYQQKPGQAPRLLIYGVSSRAIGIPDRFSGSGSGADFTLTISRLEPEDFAVYYCHQYGNSPQTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLQLVQSGAEVRKPGSSVKVSCKASGGTYNGEVISWVRQAPGEGLEWLGVFIPMFGIADYAQKFHGRVTISADRTTSTTYMELSSLRSEDTAIYYCAKVLQVGRNLVVRPLDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPGILSLSPGERATLSCRASRTISRTHLAWYQQKPGQAPRLLIYGVSSRAIGIPDRFSGSGSGADFTLTISRLEPEDFAVYYCHQYGNSPQTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.218876 | 22.810806 | 229 | 215 | 218 | 212 | 224 | 213 | 104 | fab hc1am heavy chain | fab hc1am light chain | homo sapiens | homo sapiens | E | protein | envelope glycoprotein e2 | hepatitis c virus (isolate h) | 44 | 17 | 0.77 | HL | train |
6woq_C_D | 6woq | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 1a bound to neutralizing antibody hc1am and non neutralizing antibody e1 | no | immune system/viral protein | 2020-04-25 | 2020-08-19 | x-ray diffraction | 3.67 | 0.277 | 0.227 | 32754640 | 10.1126/sciadv.abb5642 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | C | D | EVQLLEQSGAELKKPGSSVKVSCKPSDGTFRAYTLSWVRQAPGQTLEWMGRIMPTVGITNYAQKFQGRVTISADMSTATAYMELSSLRSDDTAIYYCAKGPYVGLGEGFSEWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | IELELVLTQSPLSLPVTLGQPASISCRSTQSLVYSDGNTYLNWFHQRAGQPPRRLIYKVSNRDSGVPERFSGSGSGTDFTLKISRVEAEDVGIYYCMQGAHWPPTFGGGTKVEINRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | LLEQSGAELKKPGSSVKVSCKPSDGTFRAYTLSWVRQAPGQTLEWMGRIMPTVGITNYAQKFQGRVTISADMSTATAYMELSSLRSDDTAIYYCAKGPYVGLGEGFSEWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKV | ELVLTQSPLSLPVTLGQPASISCRSTQSLVYSDGNTYLNWFHQRAGQPPRRLIYKVSNRDSGVPERFSGSGSGTDFTLKISRVEAEDVGIYYCMQGAHWPPTFGGGTKVEINRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 18.879456 | 23.827818 | 227 | 221 | 191 | 217 | 213 | 217 | 92 | fab e1 heavy chain | fab e1 light chain | homo sapiens | homo sapiens | F | protein | envelope glycoprotein e2 | hepatitis c virus (isolate h) | 52 | 21 | 0.84 | HL | train |
6woq_G_H | 6woq | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 1a bound to neutralizing antibody hc1am and non neutralizing antibody e1 | no | immune system/viral protein | 2020-04-25 | 2020-08-19 | x-ray diffraction | 3.67 | 0.277 | 0.227 | 32754640 | 10.1126/sciadv.abb5642 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | G | H | QLQLVQSGAEVRKPGSSVKVSCKASGGTYNGEVISWVRQAPGEGLEWLGVFIPMFGIADYAQKFHGRVTISADRTTSTTYMELSSLRSEDTAIYYCAKVLQVGRNLVVRPLDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | EIVLTQSPGILSLSPGERATLSCRASRTISRTHLAWYQQKPGQAPRLLIYGVSSRAIGIPDRFSGSGSGADFTLTISRLEPEDFAVYYCHQYGNSPQTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLQLVQSGAEVRKPGSSVKVSCKASGGTYNGEVISWVRQAPGEGLEWLGVFIPMFGIADYAQKFHGRVTISADRTTSTTYMELSSLRSEDTAIYYCAKVLQVGRNLVVRPLDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPGILSLSPGERATLSCRASRTISRTHLAWYQQKPGQAPRLLIYGVSSRAIGIPDRFSGSGSGADFTLTISRLEPEDFAVYYCHQYGNSPQTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN | 22.023104 | 22.641668 | 229 | 215 | 213 | 195 | 225 | 211 | 98 | fab hc1am heavy chain | fab hc1am light chain | homo sapiens | homo sapiens | F | protein | envelope glycoprotein e2 | hepatitis c virus (isolate h) | 36 | 16 | 0.76 | HL | train |
6wor_H_L | 6wor | structure of the broadly neutralizing antibody hc1am | no | immune system | 2020-04-25 | 2020-08-19 | x-ray diffraction | 2.6 | 0.253 | 0.219 | 32754640 | 10.1126/sciadv.abb5642 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | QLQLVQSGAEVRKPGSSVKVSCKASGGTYNGEVISWVRQAPGEGLEWLGVFIPMFGIADYAQKFHGRVTISADRTTSTTYMELSSLRSEDTAIYYCAKVLQVGRNLVVRPLDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | EIVLTQSPGILSLSPGERATLSCRASRTISRTHLAWYQQKPGQAPRLLIYGVSSRAIGIPDRFSGSGSGADFTLTISRLEPEDFAVYYCHQYGNSPQTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | LQLVQSGAEVRKPGSSVKVSCKASGGTYNGEVISWVRQAPGEGLEWLGVFIPMFGIADYAQKFHGRVTISADRTTSTTYMELSSLRSEDTAIYYCAKVLQVGRNLVVRPLDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | IVLTQSPGILSLSPGERATLSCRASRTISRTHLAWYQQKPGQAPRLLIYGVSSRAIGIPDRFSGSGSGADFTLTISRLEPEDFAVYYCHQYGNSPQTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.178179 | 22.776848 | 229 | 215 | 214 | 212 | 224 | 212 | 108 | fab hc1am heavy chain | fab hc1am light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
6yu8_B | 6yu8 | rna methyltransferase of sudan ebola virus | no | transferase | 2020-04-25 | 2021-02-17 | x-ray diffraction | 1.84 | 0.215 | 0.195 | 33503246 | 10.1093/nar/gkaa1276 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | DVQLVESGGGSVQAGGSLRLSCAASGRTFSRPVMAWFRQAPGKEREFVVAITWSGIRTSYADSVKGRFTISVDNAKDTVYLQMNSLKPEDTAVYYCAAGALPRTAHYEYDYWGLGTQVTVSSHHHHHH | N.A. | DVQLVESGGGSVQAGGSLRLSCAASGRTFSRPVMAWFRQAPGKEREFVVAITWSGIRTSYADSVKGRFTISVDNAKDTVYLQMNSLKPEDTAVYYCAAGALPRTAHYEYDYWGLGTQVTVSS | N.A. | 13.479706 | 0 | 128 | 0 | 122 | 0 | 122 | 0 | 0 | vhh antiboby | N.A. | lama glama | N.A. | A | protein | methyltransferase domain of the l protein | sudan virus - boniface, sudan,1976 | 42 | 15 | 0.79 | H_only | train |
7bz2_N | 7bz2 | cryo-em structure of the formoterol-bound beta2 adrenergic receptor-gs protein complex. | no | signaling protein | 2020-04-26 | 2020-08-05 | electron microscopy | 3.82 | N.A. | N.A. | 32655881 | 10.1038/s41421-020-0176-9 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS | N.A. | 13.851527 | 0 | 161 | 0 | 127 | 0 | 127 | 0 | 0 | nb35 nanobody | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;bos taurus | 46;36 | 15;12 | 0.6;0.71 | H_only | train |
6woz_B_C | 6woz | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 251249 | no | cell invasion | 2020-04-26 | 2021-01-27 | x-ray diffraction | 2.9 | 0.258 | 0.211 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | B | C | TGVHSEVQLVESGGGLVKPGGSLRLSCEASGFLFSSYSMNWVRQAPGKGLEWVSSITGYSSEVFYTDSVKGRFTVSRDNSKNSLYLQMDSLRAEDTAVYYCARALTIFGVVITDYWFFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGVHSEIVLTQSPATLSLSPGDRATLSCRASQSVTTFLAWYQQKPGQAPRLLIYDVSNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCEASGFLFSSYSMNWVRQAPGKGLEWVSSITGYSSEVFYTDSVKGRFTVSRDNSKNSLYLQMDSLRAEDTAVYYCARALTIFGVVITDYWFFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPATLSLSPGDRATLSCRASQSVTTFLAWYQQKPGQAPRLLIYDVSNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.723484 | 22.565521 | 241 | 219 | 227 | 213 | 227 | 213 | 98 | 251249 fab heavy chain | 251249 fab light chain | homo sapiens | homo sapiens | A | protein | reticulocyte binding protein 2b | plasmodium vivax (strain salvador i) | 51 | 24 | 0.86 | HL | train |
6woz_E_F | 6woz | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 251249 | no | cell invasion | 2020-04-26 | 2021-01-27 | x-ray diffraction | 2.9 | 0.258 | 0.211 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | E | F | TGVHSEVQLVESGGGLVKPGGSLRLSCEASGFLFSSYSMNWVRQAPGKGLEWVSSITGYSSEVFYTDSVKGRFTVSRDNSKNSLYLQMDSLRAEDTAVYYCARALTIFGVVITDYWFFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGVHSEIVLTQSPATLSLSPGDRATLSCRASQSVTTFLAWYQQKPGQAPRLLIYDVSNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCEASGFLFSSYSMNWVRQAPGKGLEWVSSITGYSSEVFYTDSVKGRFTVSRDNSKNSLYLQMDSLRAEDTAVYYCARALTIFGVVITDYWFFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPATLSLSPGDRATLSCRASQSVTTFLAWYQQKPGQAPRLLIYDVSNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.611116 | 22.941511 | 241 | 219 | 229 | 213 | 229 | 213 | 97 | 251249 fab heavy chain | 251249 fab light chain | homo sapiens | homo sapiens | D | protein | reticulocyte binding protein 2b | plasmodium vivax (strain salvador i) | 47 | 21 | 0.88 | HL | train |
6woz_H_I | 6woz | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 251249 | no | cell invasion | 2020-04-26 | 2021-01-27 | x-ray diffraction | 2.9 | 0.258 | 0.211 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | I | TGVHSEVQLVESGGGLVKPGGSLRLSCEASGFLFSSYSMNWVRQAPGKGLEWVSSITGYSSEVFYTDSVKGRFTVSRDNSKNSLYLQMDSLRAEDTAVYYCARALTIFGVVITDYWFFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGVHSEIVLTQSPATLSLSPGDRATLSCRASQSVTTFLAWYQQKPGQAPRLLIYDVSNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCEASGFLFSSYSMNWVRQAPGKGLEWVSSITGYSSEVFYTDSVKGRFTVSRDNSKNSLYLQMDSLRAEDTAVYYCARALTIFGVVITDYWFFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPATLSLSPGDRATLSCRASQSVTTFLAWYQQKPGQAPRLLIYDVSNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.381556 | 22.922726 | 241 | 219 | 227 | 213 | 227 | 213 | 101 | 251249 fab heavy chain | 251249 fab light chain | homo sapiens | homo sapiens | G | protein | reticulocyte binding protein 2b | plasmodium vivax (strain salvador i) | 51 | 22 | 0.81 | HL | train |
6woz_K_L | 6woz | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 251249 | no | cell invasion | 2020-04-26 | 2021-01-27 | x-ray diffraction | 2.9 | 0.258 | 0.211 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | K | L | TGVHSEVQLVESGGGLVKPGGSLRLSCEASGFLFSSYSMNWVRQAPGKGLEWVSSITGYSSEVFYTDSVKGRFTVSRDNSKNSLYLQMDSLRAEDTAVYYCARALTIFGVVITDYWFFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGVHSEIVLTQSPATLSLSPGDRATLSCRASQSVTTFLAWYQQKPGQAPRLLIYDVSNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCEASGFLFSSYSMNWVRQAPGKGLEWVSSITGYSSEVFYTDSVKGRFTVSRDNSKNSLYLQMDSLRAEDTAVYYCARALTIFGVVITDYWFFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPATLSLSPGDRATLSCRASQSVTTFLAWYQQKPGQAPRLLIYDVSNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.566708 | 22.588476 | 241 | 219 | 226 | 213 | 226 | 213 | 100 | 251249 fab heavy chain | 251249 fab light chain | homo sapiens | homo sapiens | J | protein | reticulocyte binding protein 2b | plasmodium vivax (strain salvador i) | 48 | 20 | 0.83 | HL | train |
6wpt_D_E | 6wpt | structure of the sars-cov-2 spike glycoprotein in complex with the s309 neutralizing antibody fab fragment (open state) | yes | viral protein/immune system | 2020-04-27 | 2020-05-27 | electron microscopy | 3.7 | N.A. | N.A. | 32422645 | 10.1038/s41586-020-2349-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | D | E | QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIK | VQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVT | IVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGG | 13.905176 | 12.745437 | 127 | 107 | 123 | 98 | 123 | 100 | 43 | s309 neutralizing antibody heavy chain | s309 neutralizing antibody light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 40 | 17 | 0.89 | HL | train |
6wpt_H_L | 6wpt | structure of the sars-cov-2 spike glycoprotein in complex with the s309 neutralizing antibody fab fragment (open state) | yes | viral protein/immune system | 2020-04-27 | 2020-05-27 | electron microscopy | 3.7 | N.A. | N.A. | 32422645 | 10.1038/s41586-020-2349-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | L | QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIK | VQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVT | IVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVE | 13.856563 | 12.771101 | 127 | 107 | 123 | 99 | 123 | 104 | 42 | s309 neutralizing antibody heavy chain | s309 neutralizing antibody light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 42 | 19 | 0.95 | HL | train |
6wpw_N | 6wpw | gcgr-gs signaling complex bound to a designed glucagon derivative | no | signaling protein/hormone/immune system | 2020-04-28 | 2020-08-12 | electron microscopy | 3.1 | N.A. | N.A. | 32732395 | 10.1126/science.aba3373 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.849052 | 0 | 138 | 0 | 128 | 0 | 128 | 0 | 0 | nb35 | N.A. | lama glama | N.A. | C;D | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 47;33 | 11;12 | 0.52;0.71 | H_only | train |
7c01_H_L | 7c01 | molecular basis for a potent human neutralizing antibody targeting sars-cov-2 rbd | no | viral protein | 2020-04-29 | 2020-05-27 | x-ray diffraction | 2.88 | 0.265 | 0.218 | 32454512 | 10.1038/s41586-020-2381-y | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSMNTLFLQMNSLRAEDTAVYYCARVLPMYGDYLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTHHHHHH | DIVMTQSPSSLSASVGDRVTITCRASQSISRYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPEYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSMNTLFLQMNSLRAEDTAVYYCARVLPMYGDYLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVE | DIVMTQSPSSLSASVGDRVTITCRASQSISRYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPEYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.397757 | 23.300468 | 233 | 217 | 218 | 215 | 218 | 215 | 96 | cb6 heavy chain | cb6 light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 66 | 27 | 0.82 | HL | train |
7c01_C_D | 7c01 | molecular basis for a potent human neutralizing antibody targeting sars-cov-2 rbd | no | viral protein | 2020-04-29 | 2020-05-27 | x-ray diffraction | 2.88 | 0.265 | 0.218 | 32454512 | 10.1038/s41586-020-2381-y | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | C | D | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSMNTLFLQMNSLRAEDTAVYYCARVLPMYGDYLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTHHHHHH | DIVMTQSPSSLSASVGDRVTITCRASQSISRYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPEYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSMNTLFLQMNSLRAEDTAVYYCARVLPMYGDYLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVE | DIVMTQSPSSLSASVGDRVTITCRASQSISRYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPEYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.661396 | 23.304712 | 233 | 217 | 218 | 215 | 218 | 215 | 97 | cb6 heavy chain | cb6 light chain | homo sapiens | homo sapiens | B | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 71 | 28 | 0.8 | HL | train |
6ywc_A_B | 6ywc | de novo designed protein 4e1h_95 in complex with 101f antibody | no | de novo protein | 2020-04-29 | 2020-10-07 | x-ray diffraction | 2.85 | 0.247 | 0.212 | 33398169 | 10.1038/s41589-020-00699-x | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGKV7 | A | B | MGCVAETGEFTRQVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLKSRLTISKDTSRNQVFLKITSVDTADTATYYCARLYGFTYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTETYICNVNHKPSNTKVDKKVEPKSCDGTKHHHHHH | MGCVAETGTRDIVLTQSPASLAVSLGQRATIFCRASQSVDYNGISYMHWFQQKPGQPPKLLIYAASNPESGIPARFTGSGSGTDFTLNIHPVEEEDAATYYCQQIIEDPWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECGTKHHHHHH | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLKSRLTISKDTSRNQVFLKITSVDTADTATYYCARLYGFTYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTETYICNVNHKPSNTKVDKKVEPK | RDIVLTQSPASLAVSLGQRATIFCRASQSVDYNGISYMHWFQQKPGQPPKLLIYAASNPESGIPARFTGSGSGTDFTLNIHPVEEEDAATYYCQQIIEDPWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.31451 | 23.441217 | 245 | 237 | 221 | 218 | 221 | 218 | 104 | antibody 101f, heavy chain | antibody 101f, light chain | homo sapiens | homo sapiens | C | protein | de novo design 4e1h_95 | synthetic construct | 34 | 16 | 0.94 | HL | train |
6ywc_D_E | 6ywc | de novo designed protein 4e1h_95 in complex with 101f antibody | no | de novo protein | 2020-04-29 | 2020-10-07 | x-ray diffraction | 2.85 | 0.247 | 0.212 | 33398169 | 10.1038/s41589-020-00699-x | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGKV7 | D | E | MGCVAETGEFTRQVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLKSRLTISKDTSRNQVFLKITSVDTADTATYYCARLYGFTYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTETYICNVNHKPSNTKVDKKVEPKSCDGTKHHHHHH | MGCVAETGTRDIVLTQSPASLAVSLGQRATIFCRASQSVDYNGISYMHWFQQKPGQPPKLLIYAASNPESGIPARFTGSGSGTDFTLNIHPVEEEDAATYYCQQIIEDPWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECGTKHHHHHH | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLKSRLTISKDTSRNQVFLKITSVDTADTATYYCARLYGFTYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTETYICNVNHKPSNTKVDKKVEPK | DIVLTQSPASLAVSLGQRATIFCRASQSVDYNGISYMHWFQQKPGQPPKLLIYAASNPESGIPARFTGSGSGTDFTLNIHPVEEEDAATYYCQQIIEDPWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 20.996422 | 23.674402 | 245 | 237 | 221 | 218 | 221 | 218 | 109 | antibody 101f, heavy chain | antibody 101f, light chain | homo sapiens | homo sapiens | F | protein | de novo design 4e1h_95 | synthetic construct | 33 | 17 | 0.94 | HL | train |
6ywd_A_B | 6ywd | de novo designed protein 4h_01 in complex with mota antibody | no | de novo protein | 2020-04-29 | 2020-10-07 | x-ray diffraction | 3.2 | 0.247 | 0.206 | 33398169 | 10.1038/s41589-020-00699-x | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGKV1 | A | B | MGCVAETGQVTLRESGPALVKPTQTLTLTCTFSGFSLSTAGMSVGWIRQPPGKALEWLADIWWDDKKHYNPSLKDRLTISKDTSKNQVVLKVTNMDPADTATYYCARDMIFNFYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | MGCVAETGDIQMTQSPSTLSASVGDRVTITCSASSRVGYMHWYQQKPGKAPKLLIYDTSKLASGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCFQGSGYPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVTLRESGPALVKPTQTLTLTCTFSGFSLSTAGMSVGWIRQPPGKALEWLADIWWDDKKHYNPSLKDRLTISKDTSKNQVVLKVTNMDPADTATYYCARDMIFNFYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSTLSASVGDRVTITCSASSRVGYMHWYQQKPGKAPKLLIYDTSKLASGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCFQGSGYPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.250679 | 23.198452 | 233 | 221 | 223 | 213 | 223 | 213 | 109 | antibody mota, heavy chain | antibody mota, light chain | homo sapiens | homo sapiens | C | protein | de novo designed protein 4h_01 | synthetic construct | 32 | 18 | 1 | HL | train |
6wqo_B_C | 6wqo | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 283284 | no | cell invasion | 2020-04-29 | 2021-01-27 | x-ray diffraction | 3.15 | 0.305 | 0.254 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | B | C | TGVHSQVQLQQWGAGLLKPSETLALTCTVYGGSSSGYYWNWIRQSPGKGLEWIGEISDSGSTIYNPSLESRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAKAILTRYNWLDPWSQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGVHSDIVMTQSPSSLSASVGDRISISCRASQGVNSALAWYQQKPGKAPKLLIYDASTLESGVPSRFSGSGSGTDFALTINSLQPEDFATYYCQQFNSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQWGAGLLKPSETLALTCTVYGGSSSGYYWNWIRQSPGKGLEWIGEISDSGSTIYNPSLESRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAKAILTRYNWLDPWSQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVMTQSPSSLSASVGDRISISCRASQGVNSALAWYQQKPGKAPKLLIYDASTLESGVPSRFSGSGSGTDFALTINSLQPEDFATYYCQQFNSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.553003 | 23.38635 | 234 | 219 | 212 | 213 | 219 | 213 | 85 | 283284 fab heavy chain | 283284 fab light chain | homo sapiens | homo sapiens | A | protein | reticulocyte binding protein 2b | plasmodium vivax (strain salvador i) | 43 | 18 | 0.75 | HL | train |
6wqo_E_F | 6wqo | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 283284 | no | cell invasion | 2020-04-29 | 2021-01-27 | x-ray diffraction | 3.15 | 0.305 | 0.254 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | E | F | TGVHSQVQLQQWGAGLLKPSETLALTCTVYGGSSSGYYWNWIRQSPGKGLEWIGEISDSGSTIYNPSLESRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAKAILTRYNWLDPWSQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGVHSDIVMTQSPSSLSASVGDRISISCRASQGVNSALAWYQQKPGKAPKLLIYDASTLESGVPSRFSGSGSGTDFALTINSLQPEDFATYYCQQFNSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQWGAGLLKPSETLALTCTVYGGSSSGYYWNWIRQSPGKGLEWIGEISDSGSTIYNPSLESRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAKAILTRYNWLDPWSQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVMTQSPSSLSASVGDRISISCRASQGVNSALAWYQQKPGKAPKLLIYDASTLESGVPSRFSGSGSGTDFALTINSLQPEDFATYYCQQFNSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.479666 | 23.272648 | 234 | 219 | 212 | 210 | 219 | 212 | 93 | 283284 fab heavy chain | 283284 fab light chain | homo sapiens | homo sapiens | D | protein | reticulocyte binding protein 2b | plasmodium vivax (strain salvador i) | 43 | 19 | 0.79 | HL | train |
6wrp_H_L | 6wrp | crystal structure of pi3-e12 fab, an antibody against human parainfluenza virus type iii | no | immune system | 2020-04-29 | 2021-05-05 | x-ray diffraction | 2.08 | 0.25 | 0.196 | 33876699 | 10.1080/19420862.2021.1912884 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | H | L | QVQLLESGGKLVKPGGSLRLSCAASGFTFSDHYMIWIRQAPGKGLEWISYISSSGSNTIYADSLMGRFTISRDNAKNSLYLQMNSLRTEDTAVYYCARAKWGTMGRGAPPTIYDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | DIVMTQSPLSLPVTPGEPASISCRSSQSLLQSNGNNYLEWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDAGVYYCMQALQTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLESGGKLVKPGGSLRLSCAASGFTFSDHYMIWIRQAPGKGLEWISYISSSGSNTIYADSLMGRFTISRDNAKNSLYLQMNSLRTEDTAVYYCARAKWGTMGRGAPPTIYDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIVMTQSPLSLPVTPGEPASISCRSSQSLLQSNGNNYLEWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDAGVYYCMQALQTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.277487 | 23.771069 | 232 | 219 | 221 | 218 | 227 | 218 | 97 | pi3-e12 fab heavy chain | pi3-e12 fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
6yx9_H_L | 6yx9 | cryogenic human adiponectin receptor 2 (adipor2) at 2.4 a resolution determined by serial crystallography (ssx) using crystaldirect | no | membrane protein | 2020-04-30 | 2021-05-12 | x-ray diffraction | 2.4 | 0.248 | 0.207 | 34723237 | 10.1016/j.crmeth.2021.100102 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | EVLLQQSGPELVKPGASVRITCKASGYTFTDFNMDWVKQSPGKSLEWIGDFNPNSGGSIYNQKFKDKATFTVDKSSSTAYMELRSLTFEDTAVYYCARETGTAWFAYWGQGTLVTVSAAGG | SDIQMTQSPASLSASVGETVTITCRASGNIHNFLAWYQQKQGKSPQVLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQQFWSTPYTFGGGTKLEIN | EVLLQQSGPELVKPGASVRITCKASGYTFTDFNMDWVKQSPGKSLEWIGDFNPNSGGSIYNQKFKDKATFTVDKSSSTAYMELRSLTFEDTAVYYCARETGTAWFAYWGQGTLVTVSAAGG | SDIQMTQSPASLSASVGETVTITCRASGNIHNFLAWYQQKQGKSPQVLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQQFWSTPYTFGGGTKLEIN | 13.857465 | 13.224088 | 121 | 108 | 121 | 108 | 121 | 108 | 43 | v region heavy chain | v region light chain | homo sapiens | homo sapiens | A | protein | adiponectin receptor protein 2 | homo sapiens | 44 | 17 | 0.74 | HL | train |
6yxd_H_L | 6yxd | room temperature structure of human adiponectin receptor 2 (adipor2) at 2.9 a resolution determined by serial crystallography (ssx) using crystaldirect | no | membrane protein | 2020-05-01 | 2021-05-12 | x-ray diffraction | 2.9 | 0.253 | 0.199 | 34723237 | 10.1016/j.crmeth.2021.100102 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | EVLLQQSGPELVKPGASVRITCKASGYTFTDFNMDWVKQSPGKSLEWIGDFNPNSGGSIYNQKFKDKATFTVDKSSSTAYMELRSLTFEDTAVYYCARETGTAWFAYWGQGTLVTVSAA | DIQMTQSPASLSASVGETVTITCRASGNIHNFLAWYQQKQGKSPQVLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQQFWSTPYTFGGGTKLEIN | EVLLQQSGPELVKPGASVRITCKASGYTFTDFNMDWVKQSPGKSLEWIGDFNPNSGGSIYNQKFKDKATFTVDKSSSTAYMELRSLTFEDTAVYYCARETGTAWFAYWGQGTLVTVSAA | DIQMTQSPASLSASVGETVTITCRASGNIHNFLAWYQQKQGKSPQVLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQQFWSTPYTFGGGTKLEIN | 13.732454 | 13.195477 | 119 | 107 | 119 | 107 | 119 | 107 | 43 | v region heavy chain | v region light chain | homo sapiens | homo sapiens | A | protein | adiponectin receptor protein 2 | homo sapiens | 44 | 17 | 0.74 | HL | train |
6yxg_H | 6yxg | cryogenic human adiponectin receptor 2 (adipor2) with tb-xo4 ligand determined by serial crystallography (ssx) using crystaldirect | no | membrane protein | 2020-05-01 | 2021-05-12 | x-ray diffraction | 3.01 | 0.252 | 0.212 | 34723237 | 10.1016/j.crmeth.2021.100102 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | EVLLQQSGPELVKPGASVRITCKASGYTFTDFNMDWVKQSPGKSLEWIGDFNPNSGGSIYNQKFKDKATFTVDKSSSTAYMELRSLTFEDTAVYYCARETGTAWFAYWGQGTLVTVSAAGGGGSGGGGSDIQMTQSPASLSASVGETVTITCRASGNIHNFLAWYQQKQGKSPQVLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQQFWSTPYTFGGGTKLEIN | N.A. | EVLLQQSGPELVKPGASVRITCKASGYTFTDFNMDWVKQSPGKSLEWIGDFNPNSGGSIYNQKFKDKATFTVDKSSSTAYMELRSLTFEDTAVYYCARETGTAWFAYWGQGTLVTVSAAGGGGSGGGGSDIQMTQSPASLSASVGETVTITCRASGNIHNFLAWYQQKQGKSPQVLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQQFWSTPYTFGGGTKLEIN | N.A. | 17.46817 | 0 | 236 | 0 | 236 | 0 | 236 | 0 | 0 | v region heavy and light chains | N.A. | homo sapiens | N.A. | A | protein | adiponectin receptor protein 2 | homo sapiens | 44 | 18 | 0.75 | H_only | train |
6yxk_A_B | 6yxk | crystal structure of acpa 3f3 in complex with cit-vimentin 59-74 | no | immune system | 2020-05-03 | 2021-05-12 | x-ray diffraction | 2 | 0.253 | 0.21 | 35138894 | 10.1126/sciadv.abm1759 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV4 | A | B | VQLVQPGAEVMQPGASMKVPCETSGYIFNDYYLHWVRQAPGLGLEWMGWIAPKTGVTKFAQKFQGRVNMTADSSVNTSYLEMTGLTFDDTAVYFCARGTYLPVDESAAFDVWGLGTDVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLFSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIEMTQYPDSLAVFLGERATVNCKSSQSVLHWGNDKNYFAWYQQKRGQAPKLLISSSSARESGVPDRFSGSGSGTDFNLTISSLQAEDVAVYFCQQYYEAPYTFGQGTRLEIKTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGC | VQLVQPGAEVMQPGASMKVPCETSGYIFNDYYLHWVRQAPGLGLEWMGWIAPKTGVTKFAQKFQGRVNMTADSSVNTSYLEMTGLTFDDTAVYFCARGTYLPVDESAAFDVWGLGTDVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLFSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIEMTQYPDSLAVFLGERATVNCKSSQSVLHWGNDKNYFAWYQQKRGQAPKLLISSSSARESGVPDRFSGSGSGTDFNLTISSLQAEDVAVYFCQQYYEAPYTFGQGTRLEIKTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGC | 22.476412 | 23.365023 | 223 | 218 | 220 | 218 | 223 | 218 | 101 | acpa 3f3 fab fragment - heavy chain | acpa 3f3 fab fragment - light chain | homo sapiens | homo sapiens | C | peptide | citrullinated vimentin (59-74) | homo sapiens | 17 | 10 | 0.91 | HL | train |
6yxm_B_C | 6yxm | crystal structure of acpa 1f2 in complex with cii-c-39-cit | no | immune system | 2020-05-03 | 2021-05-12 | x-ray diffraction | 2.85 | 0.276 | 0.21 | 35138894 | 10.1126/sciadv.abm1759 | 0 | label_asym_id | FabH:FabL | IGHV7 | IGLV6 | B | C | QVHLEQSGSELKKPGASVTISCKTSGYNFSHFAINWVRQAPGQGLQWMGWINTKTANLTYAQTFTGRFVFSFDTSVSTAYLHIHGLKTEDTAMYYCVRGGSLGIFGGSVGYWGQGALVSVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKIEPR | NLTLIQSRSVSGSPGQTVSISCTANGAHIGDSYVQWFQQRPGSAPRSVIFEDDKRPSGVPDRLSGSTDFSSNSASLTISGLESEDEADYYCQSYYRGDWVLGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSR | QVHLEQSGSELKKPGASVTISCKTSGYNFSHFAINWVRQAPGQGLQWMGWINTKTANLTYAQTFTGRFVFSFDTSVSTAYLHIHGLKTEDTAMYYCVRGGSLGIFGGSVGYWGQGALVSVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKIEPR | NLTLIQSRSVSGSPGQTVSISCTANGAHIGDSYVQWFQQRPGSAPRSVIFEDDKRPSGVPDRLSGSTDFSSNSASLTISGLESEDEADYYCQSYYRGDWVLGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSR | 24.053984 | 20.576403 | 222 | 212 | 213 | 212 | 222 | 212 | 99 | acpa 1f2 fab fragment - heavy chain | acpa 1f2 fab fragment - light chain | homo sapiens | homo sapiens | A | peptide | cii-c-39-cit | homo sapiens | 18 | 12 | 1 | HL | train |
6wtu_B_C | 6wtu | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 273264 | no | cell invasion | 2020-05-04 | 2021-01-27 | x-ray diffraction | 2.55 | 0.255 | 0.208 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | B | C | TGVHSEVQLLESGGGLVRPGGSQRLSCAASGFTFTPYAMTWVRQAPGKGLEWLSTISGSGGSTSYADSVKGRFTISRDNSKNILYLQMDSLRAEDTALYYCTKDKDEYTFGHNAFDVWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGSVTSYELTQAPSVSVAPGQTARITCGGDNIGRTSVHWYQQKPGQAPVLVIFYDNDRPSGIPERFSGSNSGNMATLSISRVEVGDEADYYCQVWDSNNDHPVFGGGTKLTVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLLESGGGLVRPGGSQRLSCAASGFTFTPYAMTWVRQAPGKGLEWLSTISGSGGSTSYADSVKGRFTISRDNSKNILYLQMDSLRAEDTALYYCTKDKDEYTFGHNAFDVWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | YELTQAPSVSVAPGQTARITCGGDNIGRTSVHWYQQKPGQAPVLVIFYDNDRPSGIPERFSGSNSGNMATLSISRVEVGDEADYYCQVWDSNNDHPVFGGGTKLTVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 22.176094 | 23.89752 | 238 | 219 | 219 | 209 | 226 | 209 | 91 | 273264 fab heavy chain | 273264 fab light chain | homo sapiens | homo sapiens | A;D | protein;protein | reticulocyte binding protein 2b;reticulocyte binding protein 2b | plasmodium vivax (strain salvador i);plasmodium vivax (strain salvador i) | 44;19 | 21;6 | 0.91;0.67 | HL | train |
6wtu_E_F | 6wtu | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 273264 | no | cell invasion | 2020-05-04 | 2021-01-27 | x-ray diffraction | 2.55 | 0.255 | 0.208 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | E | F | TGVHSEVQLLESGGGLVRPGGSQRLSCAASGFTFTPYAMTWVRQAPGKGLEWLSTISGSGGSTSYADSVKGRFTISRDNSKNILYLQMDSLRAEDTALYYCTKDKDEYTFGHNAFDVWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGSVTSYELTQAPSVSVAPGQTARITCGGDNIGRTSVHWYQQKPGQAPVLVIFYDNDRPSGIPERFSGSNSGNMATLSISRVEVGDEADYYCQVWDSNNDHPVFGGGTKLTVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLLESGGGLVRPGGSQRLSCAASGFTFTPYAMTWVRQAPGKGLEWLSTISGSGGSTSYADSVKGRFTISRDNSKNILYLQMDSLRAEDTALYYCTKDKDEYTFGHNAFDVWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | YELTQAPSVSVAPGQTARITCGGDNIGRTSVHWYQQKPGQAPVLVIFYDNDRPSGIPERFSGSNSGNMATLSISRVEVGDEADYYCQVWDSNNDHPVFGGGTKLTVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 21.970366 | 23.680552 | 238 | 219 | 218 | 209 | 224 | 209 | 92 | 273264 fab heavy chain | 273264 fab light chain | homo sapiens | homo sapiens | A;D | protein;protein | reticulocyte binding protein 2b;reticulocyte binding protein 2b | plasmodium vivax (strain salvador i);plasmodium vivax (strain salvador i) | 17;45 | 6;21 | 0.75;0.84 | HL | train |
6wtu_H_I | 6wtu | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 273264 | no | cell invasion | 2020-05-04 | 2021-01-27 | x-ray diffraction | 2.55 | 0.255 | 0.208 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | H | I | TGVHSEVQLLESGGGLVRPGGSQRLSCAASGFTFTPYAMTWVRQAPGKGLEWLSTISGSGGSTSYADSVKGRFTISRDNSKNILYLQMDSLRAEDTALYYCTKDKDEYTFGHNAFDVWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGSVTSYELTQAPSVSVAPGQTARITCGGDNIGRTSVHWYQQKPGQAPVLVIFYDNDRPSGIPERFSGSNSGNMATLSISRVEVGDEADYYCQVWDSNNDHPVFGGGTKLTVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLLESGGGLVRPGGSQRLSCAASGFTFTPYAMTWVRQAPGKGLEWLSTISGSGGSTSYADSVKGRFTISRDNSKNILYLQMDSLRAEDTALYYCTKDKDEYTFGHNAFDVWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | YELTQAPSVSVAPGQTARITCGGDNIGRTSVHWYQQKPGQAPVLVIFYDNDRPSGIPERFSGSNSGNMATLSISRVEVGDEADYYCQVWDSNNDHPVFGGGTKLTVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 21.03848 | 23.92985 | 238 | 219 | 218 | 209 | 224 | 209 | 94 | 273264 fab heavy chain | 273264 fab light chain | homo sapiens | homo sapiens | G | protein | reticulocyte binding protein 2b | plasmodium vivax (strain salvador i) | 48 | 21 | 0.81 | HL | train |
6wtu_K_L | 6wtu | plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 273264 | no | cell invasion | 2020-05-04 | 2021-01-27 | x-ray diffraction | 2.55 | 0.255 | 0.208 | 33750786 | 10.1038/s41467-021-21811-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | K | L | TGVHSEVQLLESGGGLVRPGGSQRLSCAASGFTFTPYAMTWVRQAPGKGLEWLSTISGSGGSTSYADSVKGRFTISRDNSKNILYLQMDSLRAEDTALYYCTKDKDEYTFGHNAFDVWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCP | TGSVTSYELTQAPSVSVAPGQTARITCGGDNIGRTSVHWYQQKPGQAPVLVIFYDNDRPSGIPERFSGSNSGNMATLSISRVEVGDEADYYCQVWDSNNDHPVFGGGTKLTVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLLESGGGLVRPGGSQRLSCAASGFTFTPYAMTWVRQAPGKGLEWLSTISGSGGSTSYADSVKGRFTISRDNSKNILYLQMDSLRAEDTALYYCTKDKDEYTFGHNAFDVWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | YELTQAPSVSVAPGQTARITCGGDNIGRTSVHWYQQKPGQAPVLVIFYDNDRPSGIPERFSGSNSGNMATLSISRVEVGDEADYYCQVWDSNNDHPVFGGGTKLTVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 20.780106 | 23.89944 | 238 | 219 | 217 | 207 | 224 | 209 | 93 | 273264 fab heavy chain | 273264 fab light chain | homo sapiens | homo sapiens | J | protein | reticulocyte binding protein 2b | plasmodium vivax (strain salvador i) | 45 | 21 | 0.91 | HL | train |
6yye_C | 6yye | trem2 extracellular domain (19-131) in complex with single-chain variable fragment (scfv-2) | no | immune system | 2020-05-04 | 2021-02-17 | x-ray diffraction | 3.36 | 0.327 | 0.298 | 34233201 | 10.1016/j.str.2021.06.010 | 0 | auth_asym_id | scFv | N.A. | N.A. | C | N.A. | SMEVQLLESGGGLVQPGGSLRLSCAASGFTFYSSYMGWVRQAPGKGLEWVSYISSSGSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARVGGYYSWGNGIDYWGQGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYGVYYPFTFGQGTKLEIK | N.A. | EVQLLESGGGLVQPGGSLRLSCAASGFTFYSSYMGWVRQAPGKGLEWVSYISSSGSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARVGGYYSWGNGIDYWGQGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYGVYYPFTFGQGTKLEIK | N.A. | 17.453234 | 0 | 247 | 0 | 231 | 0 | 245 | 0 | 0 | trem2 single chain variable 2 | N.A. | homo sapiens | N.A. | A | protein | triggering receptor expressed on myeloid cells 2 | homo sapiens | 43 | 18 | 0.86 | H_only | train |
6yye_D | 6yye | trem2 extracellular domain (19-131) in complex with single-chain variable fragment (scfv-2) | no | immune system | 2020-05-04 | 2021-02-17 | x-ray diffraction | 3.36 | 0.327 | 0.298 | 34233201 | 10.1016/j.str.2021.06.010 | 0 | auth_asym_id | scFv | N.A. | N.A. | D | N.A. | SMEVQLLESGGGLVQPGGSLRLSCAASGFTFYSSYMGWVRQAPGKGLEWVSYISSSGSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARVGGYYSWGNGIDYWGQGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYGVYYPFTFGQGTKLEIK | N.A. | MEVQLLESGGGLVQPGGSLRLSCAASGFTFYSSYMGWVRQAPGKGLEWVSYISSSGSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARVGGYYSWGNGIDYWGQGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYGVYYPFTFGQGTKLEIK | N.A. | 17.444334 | 0 | 247 | 0 | 232 | 0 | 246 | 0 | 0 | trem2 single chain variable 2 | N.A. | homo sapiens | N.A. | B | protein | triggering receptor expressed on myeloid cells 2 | homo sapiens | 47 | 19 | 0.79 | H_only | train |
6yz5_F | 6yz5 | h11-d4 complex with sars-cov-2 rbd | no | viral protein | 2020-05-06 | 2020-06-03 | x-ray diffraction | 1.8 | 0.193 | 0.166 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCARTENVRSLLSDYATWPYDYWGQGTQVTVSSKHHHHHH | N.A. | QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCARTENVRSLLSDYATWPYDYWGQGTQVTVSS | N.A. | 13.945516 | 0 | 134 | 0 | 127 | 0 | 127 | 0 | 0 | nanobody h11-d4 | N.A. | lama glama | N.A. | E | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 35 | 16 | 1 | H_only | train |
7c2e_N | 7c2e | glp-1r-gs complex structure with a small molecule full agonist | no | membrane protein | 2020-05-07 | 2020-08-26 | electron microscopy | 4.2 | N.A. | N.A. | 32724086 | 10.1038/s41422-020-0384-8 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.783177 | 0 | 138 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 44;35 | 13;11 | 0.59;0.65 | H_only | train |
6ww5_E_F | 6ww5 | structure of vcindy-na-fab84 in nanodisc | no | membrane protein | 2020-05-07 | 2020-09-16 | electron microscopy | 3.15 | N.A. | N.A. | 32869741 | 10.7554/eLife.61350 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | E | F | MKKNIAFLLASMFVFSIATNAYAEISEVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYNIHYWRWYNPAGQAMDYWGQGTLVTVFNQIKGGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | MKKNIAFLLASMFVFSIATNAYASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRYGLLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYNIHYWRWYNPAGQAMDYWGQGTLVTVFNQIKGGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | MTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRYGLLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 23.671997 | 22.25633 | 261 | 238 | 228 | 209 | 228 | 209 | 101 | fab84 heavy chain | fab84 light chain | homo sapiens | homo sapiens | A | protein | dass family sodium-coupled anion symporter | vibrio cholerae | 61 | 20 | 0.8 | HL | train |
6ww5_C_D | 6ww5 | structure of vcindy-na-fab84 in nanodisc | no | membrane protein | 2020-05-07 | 2020-09-16 | electron microscopy | 3.15 | N.A. | N.A. | 32869741 | 10.7554/eLife.61350 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | C | D | MKKNIAFLLASMFVFSIATNAYAEISEVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYNIHYWRWYNPAGQAMDYWGQGTLVTVFNQIKGGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | MKKNIAFLLASMFVFSIATNAYASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRYGLLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTIYSSSIHWVRQAPGKGLEWVASIYSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYNIHYWRWYNPAGQAMDYWGQGTLVTVFNQIKGGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | MTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRYGLLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 23.672 | 22.25638 | 261 | 238 | 228 | 209 | 228 | 209 | 102 | fab84 heavy chain | fab84 light chain | homo sapiens | homo sapiens | B | protein | dass family sodium-coupled anion symporter | vibrio cholerae | 62 | 20 | 0.8 | HL | train |
6z06_H_L | 6z06 | crystal structure of puumala virus gc in complex with fab 4g2 | no | viral protein | 2020-05-07 | 2020-12-30 | x-ray diffraction | 3.5 | 0.264 | 0.217 | 33349334 | 10.7554/eLife.58242 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | TGQVQMKESGGGLVQPGKSLKLSCAASGFTFSDFWMSWVRQPSGKGLEWVARINTNGDTTHYTDDMKGRFTISRDNAKTTLYLEMSPLKSEDTAMYYCTRDRLGPFDYWGQGTTVTVSSATTKGPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRDCGGTKHHHHHH | TGDIVMTQSPAFPPVSLGDTVTITCQASQSVYKNLAWYQQKPGKSPRLLIFGMSSLADGVPSRFSASGSDKQYSLKIRGLQPEDAAIYYCQQHYIAPYTFGAGTRLEIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | GQVQMKESGGGLVQPGKSLKLSCAASGFTFSDFWMSWVRQPSGKGLEWVARINTNGDTTHYTDDMKGRFTISRDNAKTTLYLEMSPLKSEDTAMYYCTRDRLGPFDYWGQGTTVTVSSATTKGPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVP | TGDIVMTQSPAFPPVSLGDTVTITCQASQSVYKNLAWYQQKPGKSPRLLIFGMSSLADGVPSRFSASGSDKQYSLKIRGLQPEDAAIYYCQQHYIAPYTFGAGTRLEIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 20.766256 | 23.46921 | 231 | 216 | 212 | 213 | 217 | 213 | 84 | fab 4g2 heavy chain | fab 4g2 light chain | myodes glareolus | myodes glareolus | A | protein | envelope polyprotein | puumala orthohantavirus | 40 | 16 | 0.73 | HL | train |
6wvz_H_L | 6wvz | crystal structure of anti-met fab arm of amivantamab in complex with human met | no | transferase/immune system | 2020-05-07 | 2021-04-28 | x-ray diffraction | 3.1 | 0.235 | 0.19 | 33839159 | 10.1016/j.jbc.2021.100641 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGASVKVSCETSGYTFTSYGISWVRQAPGHGLEWMGWISAYNGYTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDLRGTNYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH | DIQMTQSPSSVSASVGDRVTITCRASQGISNWLAWFQHKPGKAPKLLIYAASSLLSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCETSGYTFTSYGISWVRQAPGHGLEWMGWISAYNGYTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDLRGTNYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQMTQSPSSVSASVGDRVTITCRASQGISNWLAWFQHKPGKAPKLLIYAASSLLSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.123917 | 22.979856 | 228 | 214 | 215 | 213 | 222 | 213 | 94 | heavy chain of anti-met fab of amivantamab | light chain of anti-met fab of amivantamab | homo sapiens | homo sapiens | M | protein | hepatocyte growth factor receptor | homo sapiens | 56 | 22 | 0.69 | HL | train |
7c2l_H_L | 7c2l | s protein of sars-cov-2 in complex bound with 4a8 | yes | membrane protein/immune system | 2020-05-08 | 2020-07-01 | electron microscopy | 3.1 | N.A. | N.A. | 32571838 | 10.1126/science.abc6952 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | H | L | EVQLVESGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETMYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATSTAVAGTPDLFDYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVL... | EIVMTQSPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCTQATQFPYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETMYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATSTAVAGTPDLFDYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVMTQSPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCTQATQFPYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.09613 | 23.233934 | 458 | 219 | 229 | 219 | 229 | 219 | 113 | heavy chain of 4a8 | light chain of 4a8 | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 42 | 24 | 0.89 | HL | train |
7c2l_I_M | 7c2l | s protein of sars-cov-2 in complex bound with 4a8 | yes | membrane protein/immune system | 2020-05-08 | 2020-07-01 | electron microscopy | 3.1 | N.A. | N.A. | 32571838 | 10.1126/science.abc6952 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | I | M | EVQLVESGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETMYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATSTAVAGTPDLFDYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVL... | EIVMTQSPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCTQATQFPYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETMYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATSTAVAGTPDLFDYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVMTQSPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCTQATQFPYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.096127 | 23.233934 | 458 | 219 | 229 | 219 | 229 | 219 | 113 | heavy chain of 4a8 | light chain of 4a8 | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 42 | 24 | 0.89 | HL | train |
7c2l_J_N | 7c2l | s protein of sars-cov-2 in complex bound with 4a8 | yes | membrane protein/immune system | 2020-05-08 | 2020-07-01 | electron microscopy | 3.1 | N.A. | N.A. | 32571838 | 10.1126/science.abc6952 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | J | N | EVQLVESGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETMYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATSTAVAGTPDLFDYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVL... | EIVMTQSPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCTQATQFPYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDGETMYAQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCATSTAVAGTPDLFDYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVMTQSPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCTQATQFPYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.096125 | 23.233934 | 458 | 219 | 229 | 219 | 229 | 219 | 113 | heavy chain of 4a8 | light chain of 4a8 | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 42 | 24 | 0.89 | HL | train |
6wwz_S | 6wwz | cryo-em structure of the human chemokine receptor ccr6 in complex with ccl20 and a go protein | no | membrane protein | 2020-05-09 | 2020-06-24 | electron microscopy | 3.34 | N.A. | N.A. | 32541785 | 10.1038/s41467-020-16820-6 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | METDTLLLWVLLLWVPGSTGDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 18.098757 | 0 | 287 | 0 | 231 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(o) subunit alpha,guanine nucleotide-binding protein g(o) subunit alpha | rattus norvegicus;homo sapiens | 20;30 | 8;19 | 0.8;0.95 | H_only | train |
7c2s_G_H | 7c2s | helical reconstruction of dengue virus serotype 3 complexed with fab c10 | no | virus | 2020-05-09 | 2020-07-08 | electron microscopy | 10.4 | N.A. | N.A. | 32561757 | 10.1038/s41467-020-16925-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | G | H | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVS | SALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVL | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVS | SALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVL | 13.832372 | 12.818735 | 127 | 109 | 127 | 109 | 127 | 109 | 75 | heavy chain of fab c10 | light chain of fab c10 | homo sapiens | homo sapiens | A;B | protein;protein | envelope protein;envelope protein | dengue virus 3;dengue virus 3 | 22;20 | 9;8 | 0.9;1.0 | HL | train |
7c2s_I_M | 7c2s | helical reconstruction of dengue virus serotype 3 complexed with fab c10 | no | virus | 2020-05-09 | 2020-07-08 | electron microscopy | 10.4 | N.A. | N.A. | 32561757 | 10.1038/s41467-020-16925-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | I | M | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVS | SALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVL | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVS | SALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVL | 13.842906 | 12.8339 | 127 | 109 | 127 | 109 | 127 | 109 | 70 | heavy chain of fab c10 | light chain of fab c10 | homo sapiens | homo sapiens | A;B | protein;protein | envelope protein;envelope protein | dengue virus 3;dengue virus 3 | 20;49 | 8;19 | 1.0;0.79 | HL | train |
7c2t_K_L | 7c2t | helical reconstruction of zika virus complexed with fab c10 | no | virus | 2020-05-09 | 2020-07-08 | electron microscopy | 9.4 | N.A. | N.A. | 32561757 | 10.1038/s41467-020-16925-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | K | L | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVS | SALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVL | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVS | SALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVL | 13.71842 | 12.59097 | 127 | 109 | 127 | 109 | 127 | 109 | 64 | heavy chain from fab c10 | light chain from fab c10 | homo sapiens | homo sapiens | B;N | protein;protein | envelope protein;envelope protein | zika virus;zika virus | 46;42 | 21;14 | 0.91;0.7 | HL | train |
7c2t_V_W | 7c2t | helical reconstruction of zika virus complexed with fab c10 | no | virus | 2020-05-09 | 2020-07-08 | electron microscopy | 9.4 | N.A. | N.A. | 32561757 | 10.1038/s41467-020-16925-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | V | W | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVS | SALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVL | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVS | SALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVL | 13.720886 | 12.589748 | 127 | 109 | 127 | 109 | 127 | 109 | 64 | heavy chain from fab c10 | light chain from fab c10 | homo sapiens | homo sapiens | B;N | protein;protein | envelope protein;envelope protein | zika virus;zika virus | 43;47 | 14;22 | 0.67;0.92 | HL | train |
6wx2_A_B | 6wx2 | vaccine-elicited mouse fp-targeting neutralizing antibody vfp16.02 with f60p mutation on light chain in complex with hiv fusion peptide (residue 512-519) | no | immune system/viral protein | 2020-05-09 | 2021-03-17 | x-ray diffraction | 2.39 | 0.25 | 0.2 | 33649208 | 10.1073/pnas.2011653118 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | A | B | QVQLLQSGAELVRPGASVTLSCKASGYAFSDYEIHWVKQTPVRGLDWIGAFDPKSGASASNQKVKGRAILTADKSSSTAYMELRSLTSEDSAVYYCTRLRYFGYFDVWGTGTTVTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DVLMTQTPLSLPVSLGGQASISCRSSQSVVYSDGDTYLEWYLQKPGQSPKLLIYKVSRRPSGVPDRFSGSGSGTDFTLKISRVETEDLGVYYCFQGSHVPYTFGGGTKLEIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | QVQLLQSGAELVRPGASVTLSCKASGYAFSDYEIHWVKQTPVRGLDWIGAFDPKSGASASNQKVKGRAILTADKSSSTAYMELRSLTSEDSAVYYCTRLRYFGYFDVWGTGTTVTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DVLMTQTPLSLPVSLGGQASISCRSSQSVVYSDGDTYLEWYLQKPGQSPKLLIYKVSRRPSGVPDRFSGSGSGTDFTLKISRVETEDLGVYYCFQGSHVPYTFGGGTKLEIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | 20.34738 | 24.13749 | 217 | 218 | 210 | 218 | 217 | 218 | 91 | vfp16.02 antibody heavy chain | vfp16.02 antibody light chain | mus musculus | mus musculus | C | peptide | fusion peptide | human immunodeficiency virus 1 | 33 | 20 | 0.8 | HL | train |
6wx2_H_L | 6wx2 | vaccine-elicited mouse fp-targeting neutralizing antibody vfp16.02 with f60p mutation on light chain in complex with hiv fusion peptide (residue 512-519) | no | immune system/viral protein | 2020-05-09 | 2021-03-17 | x-ray diffraction | 2.39 | 0.25 | 0.2 | 33649208 | 10.1073/pnas.2011653118 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | H | L | QVQLLQSGAELVRPGASVTLSCKASGYAFSDYEIHWVKQTPVRGLDWIGAFDPKSGASASNQKVKGRAILTADKSSSTAYMELRSLTSEDSAVYYCTRLRYFGYFDVWGTGTTVTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DVLMTQTPLSLPVSLGGQASISCRSSQSVVYSDGDTYLEWYLQKPGQSPKLLIYKVSRRPSGVPDRFSGSGSGTDFTLKISRVETEDLGVYYCFQGSHVPYTFGGGTKLEIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | QVQLLQSGAELVRPGASVTLSCKASGYAFSDYEIHWVKQTPVRGLDWIGAFDPKSGASASNQKVKGRAILTADKSSSTAYMELRSLTSEDSAVYYCTRLRYFGYFDVWGTGTTVTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DVLMTQTPLSLPVSLGGQASISCRSSQSVVYSDGDTYLEWYLQKPGQSPKLLIYKVSRRPSGVPDRFSGSGSGTDFTLKISRVETEDLGVYYCFQGSHVPYTFGGGTKLEIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | 20.308598 | 24.09308 | 217 | 218 | 210 | 218 | 217 | 218 | 86 | vfp16.02 antibody heavy chain | vfp16.02 antibody light chain | mus musculus | mus musculus | F | peptide | fusion peptide | human immunodeficiency virus 1 | 33 | 20 | 0.8 | HL | train |
6z10_B | 6z10 | crystal structure of a humanized (k18e, k269n) rat succinate receptor sucnr1 (gpr91) in complex with a nanobody and antagonist | yes | membrane protein | 2020-05-11 | 2020-09-16 | x-ray diffraction | 2.27 | 0.223 | 0.204 | 32856916 | 10.1021/acs.jmedchem.0c01020 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | DYKDDDDKEVQLVESGGGLVQPGGSLRLSCEASGYTLANYAIGWFRQAPGKEREGVSCISSGGSTVYSESVKDRFTISRDNAKKIVYLQMNSLQPEDTAVYYCAADPFGERLCIDPNTFAGYLETWGQGTQVTVSSLEVLFQ | N.A. | EVQLVESGGGLVQPGGSLRLSCEASGYTLANYAIGWFRQAPGKEREGVSCISSGGSTVYSESVKDRFTISRDNAKKIVYLQMNSLQPEDTAVYYCAADPFGERLCIDPNTFAGYLETWGQGTQVTVSSL | N.A. | 13.809155 | 0 | 142 | 0 | 128 | 0 | 129 | 0 | 0 | nanobody6 | N.A. | vicugna pacos | N.A. | A | protein | succinate receptor 1 | rattus norvegicus | 46 | 13 | 0.54 | H_only | train |
6wxl_H_L | 6wxl | cryo-em structure of the vrc315 clinical trial, vaccine-elicited, human antibody 1d12 in complex with an h7 sh13 ha trimer | no | immune system | 2020-05-11 | 2021-06-09 | electron microscopy | 2.76 | N.A. | N.A. | 35489332 | 10.1016/j.str.2022.04.003 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | H | L | QLVQSGAEVKKPGASVKVSCKASGYTFTGYYLHWVRQAPGQGLEWMGRINPDTGGTNYAQKFQGRVSMTRDMSISTHYMELSRLTSDDTAVYYCATKRGAVTAMVYYYFYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIVMTQSPLSLSVTPGEPASISCRSSHSLLHLNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGIYYCMQALRTPPGLTFGGGTKVDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QLVQSGAEVKKPGASVKVSCKASGYTFTGYYLHWVRQAPGQGLEWMGRINPDTGGTNYAQKFQGRVSMTRDMSISTHYMELSRLTSDDTAVYYCATKRGAVTAMVYYYFYGMDVWGQGTTVTVSS | DIVMTQSPLSLSVTPGEPASISCRSSHSLLHLNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGIYYCMQALRTPPGLTFGGGTKVDIK | 14.729481 | 13.8496 | 232 | 221 | 125 | 114 | 125 | 114 | 46 | 1d21 heavy chain | 1d12 light chain | homo sapiens | homo sapiens | A;B | protein;protein | hemagglutinin ha1 chain;hemagglutinin ha2 chain | influenza a virus (a/shanghai/js01/2013(h7n9));influenza a virus (a/shanghai/js01/2013(h7n9)) | 25;38 | 12;17 | 1.0;0.85 | HL | train |
6wxl_F_E | 6wxl | cryo-em structure of the vrc315 clinical trial, vaccine-elicited, human antibody 1d12 in complex with an h7 sh13 ha trimer | no | immune system | 2020-05-11 | 2021-06-09 | electron microscopy | 2.76 | N.A. | N.A. | 35489332 | 10.1016/j.str.2022.04.003 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | F | E | QLVQSGAEVKKPGASVKVSCKASGYTFTGYYLHWVRQAPGQGLEWMGRINPDTGGTNYAQKFQGRVSMTRDMSISTHYMELSRLTSDDTAVYYCATKRGAVTAMVYYYFYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIVMTQSPLSLSVTPGEPASISCRSSHSLLHLNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGIYYCMQALRTPPGLTFGGGTKVDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QLVQSGAEVKKPGASVKVSCKASGYTFTGYYLHWVRQAPGQGLEWMGRINPDTGGTNYAQKFQGRVSMTRDMSISTHYMELSRLTSDDTAVYYCATKRGAVTAMVYYYFYGMDVWGQGTTVTVSS | DIVMTQSPLSLSVTPGEPASISCRSSHSLLHLNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGIYYCMQALRTPPGLTFGGGTKVDIK | 14.729557 | 13.849604 | 232 | 221 | 125 | 114 | 125 | 114 | 46 | 1d21 heavy chain | 1d12 light chain | homo sapiens | homo sapiens | C;D | protein;protein | hemagglutinin ha1 chain;hemagglutinin ha2 chain | influenza a virus (a/shanghai/js01/2013(h7n9));influenza a virus (a/shanghai/js01/2013(h7n9)) | 25;38 | 12;17 | 1.0;0.85 | HL | train |
6wxl_K_J | 6wxl | cryo-em structure of the vrc315 clinical trial, vaccine-elicited, human antibody 1d12 in complex with an h7 sh13 ha trimer | no | immune system | 2020-05-11 | 2021-06-09 | electron microscopy | 2.76 | N.A. | N.A. | 35489332 | 10.1016/j.str.2022.04.003 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | K | J | QLVQSGAEVKKPGASVKVSCKASGYTFTGYYLHWVRQAPGQGLEWMGRINPDTGGTNYAQKFQGRVSMTRDMSISTHYMELSRLTSDDTAVYYCATKRGAVTAMVYYYFYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIVMTQSPLSLSVTPGEPASISCRSSHSLLHLNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGIYYCMQALRTPPGLTFGGGTKVDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QLVQSGAEVKKPGASVKVSCKASGYTFTGYYLHWVRQAPGQGLEWMGRINPDTGGTNYAQKFQGRVSMTRDMSISTHYMELSRLTSDDTAVYYCATKRGAVTAMVYYYFYGMDVWGQGTTVTVSS | DIVMTQSPLSLSVTPGEPASISCRSSHSLLHLNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGIYYCMQALRTPPGLTFGGGTKVDIK | 14.729499 | 13.849659 | 232 | 221 | 125 | 114 | 125 | 114 | 46 | 1d21 heavy chain | 1d12 light chain | homo sapiens | homo sapiens | G;I | protein;protein | hemagglutinin ha1 chain;hemagglutinin ha2 chain | influenza a virus (a/shanghai/js01/2013(h7n9));influenza a virus (a/shanghai/js01/2013(h7n9)) | 25;38 | 12;17 | 1.0;0.85 | HL | train |
6wyr_H_L | 6wyr | crystal structure of anti-muscle specific kinase (musk) fab, musk1a | no | immune system | 2020-05-13 | 2020-07-29 | x-ray diffraction | 1.8 | 0.213 | 0.18 | 32820331 | 10.1084/jem.20200513 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV3 | H | L | QVQLVQSGAEVKKPGASVKVSCKTSGYTFNNYDINWVRQAAGQGLEWMGWMNPYSGNTGYAQKFQGRVTMTRNISITTVYMELSSLRSEDTAVYYCAREVRGDTGYGGGSDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH | SYELTQPPSVSLSPGQTATITCSGDKLDDNYVCWYQQKPGQSPVLVIYQDTMRPSGIPERFSGSNSGNIATLTISGTQAVDEADYYCQAWDGSTVVFGGGTRLTVLGQPKAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKTSGYTFNNYDINWVRQAAGQGLEWMGWMNPYSGNTGYAQKFQGRVTMTRNISITTVYMELSSLRSEDTAVYYCAREVRGDTGYGGGSDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | YELTQPPSVSLSPGQTATITCSGDKLDDNYVCWYQQKPGQSPVLVIYQDTMRPSGIPERFSGSNSGNIATLTISGTQAVDEADYYCQAWDGSTVVFGGGTRLTVLGQPKAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.232187 | 21.281368 | 232 | 214 | 221 | 213 | 224 | 213 | 107 | musk1a heavy chain | musk1a light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
6wyr_I_M | 6wyr | crystal structure of anti-muscle specific kinase (musk) fab, musk1a | no | immune system | 2020-05-13 | 2020-07-29 | x-ray diffraction | 1.8 | 0.213 | 0.18 | 32820331 | 10.1084/jem.20200513 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV3 | I | M | QVQLVQSGAEVKKPGASVKVSCKTSGYTFNNYDINWVRQAAGQGLEWMGWMNPYSGNTGYAQKFQGRVTMTRNISITTVYMELSSLRSEDTAVYYCAREVRGDTGYGGGSDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH | SYELTQPPSVSLSPGQTATITCSGDKLDDNYVCWYQQKPGQSPVLVIYQDTMRPSGIPERFSGSNSGNIATLTISGTQAVDEADYYCQAWDGSTVVFGGGTRLTVLGQPKAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKTSGYTFNNYDINWVRQAAGQGLEWMGWMNPYSGNTGYAQKFQGRVTMTRNISITTVYMELSSLRSEDTAVYYCAREVRGDTGYGGGSDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | ELTQPPSVSLSPGQTATITCSGDKLDDNYVCWYQQKPGQSPVLVIYQDTMRPSGIPERFSGSNSGNIATLTISGTQAVDEADYYCQAWDGSTVVFGGGTRLTVLGQPKAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.452847 | 21.170862 | 232 | 214 | 225 | 212 | 225 | 212 | 102 | musk1a heavy chain | musk1a light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
6wyt_H_L | 6wyt | crystal structure of anti-muscle specific kinase (musk) fab, musk1b | no | immune system | 2020-05-13 | 2020-07-29 | x-ray diffraction | 1.75 | 0.222 | 0.195 | 32820331 | 10.1084/jem.20200513 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV3 | H | L | EVQLVEWGAGLLKPSETLSLTCAVYGGSFSGDYWWTWIRQPPGKGLEWIGEIDHTGNTNYNPSLKSRLTLSVDMSKNHFSLKLTSVTAADTALYFCARQEGLGYYDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SYELTQSPSVSVSPGQTANITCSGDKLGDRYASWYQQKPAQSPVLVIYQDDRRPSGIPERFSGSNSGNTATLTISGTQGMDEADYYCQAWDGTTVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVEWGAGLLKPSETLSLTCAVYGGSFSGDYWWTWIRQPPGKGLEWIGEIDHTGNTNYNPSLKSRLTLSVDMSKNHFSLKLTSVTAADTALYFCARQEGLGYYDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | SYELTQSPSVSVSPGQTANITCSGDKLGDRYASWYQQKPAQSPVLVIYQDDRRPSGIPERFSGSNSGNTATLTISGTQGMDEADYYCQAWDGTTVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 24.62787 | 20.603907 | 221 | 211 | 220 | 209 | 220 | 209 | 97 | musk1b heavy chain | musk1b light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
6wzg_N | 6wzg | human secretin receptor gs complex | no | membrane protein | 2020-05-13 | 2020-08-12 | electron microscopy | 2.3 | N.A. | N.A. | 32811827 | 10.1038/s41467-020-17791-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.594933 | 0 | 138 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 56;31 | 16;11 | 0.57;0.73 | H_only | train |
6z1v_B | 6z1v | structure of the ec2 domain of cd9 in complex with nanobody 4e8 | no | cell adhesion | 2020-05-14 | 2020-09-23 | x-ray diffraction | 1.33 | 0.19 | 0.151 | 32958604 | 10.26508/lsa.202000883 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | EVQLVESGGRLVRTGGSLRLSCAASGRTFSNYVMGWFRQAPGKEREVVAAITWSGDITWHADFVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAATERWGLRAPADWGSWGQGTQVTVSSHGSGLVPRGSGGGHHHHHH | N.A. | EVQLVESGGRLVRTGGSLRLSCAASGRTFSNYVMGWFRQAPGKEREVVAAITWSGDITWHADFVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAATERWGLRAPADWGSWGQGTQVTVSS | N.A. | 13.602615 | 0 | 142 | 0 | 123 | 0 | 123 | 0 | 0 | nanobody 4e8 | N.A. | lama glama | N.A. | A | protein | cd9 antigen | homo sapiens | 31 | 11 | 0.73 | H_only | train |
6z1z_A | 6z1z | structure of the anti-cd9 nanobody 4c8 | no | immune system | 2020-05-14 | 2020-09-23 | x-ray diffraction | 1.7 | 0.231 | 0.201 | 32958604 | 10.26508/lsa.202000883 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | EVQLVESGGGLVQAGGSLRLSCAASGRTFSDYVMGWFRQAPGKERTFVARIGWSGDLTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCAADERWGTGGKFDYWGQGTQVTVSSHGSGLVPR | N.A. | EVQLVESGGGLVQAGGSLRLSCAASGRTFSDYVMGWFRQAPGKERTFVARIGWSGDLTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCAADERWGTGGKFDYWGQGTQVTVSS | N.A. | 13.45944 | 0 | 129 | 0 | 118 | 0 | 121 | 0 | 0 | nanobody 4c8 | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
6z1z_B | 6z1z | structure of the anti-cd9 nanobody 4c8 | no | immune system | 2020-05-14 | 2020-09-23 | x-ray diffraction | 1.7 | 0.231 | 0.201 | 32958604 | 10.26508/lsa.202000883 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | EVQLVESGGGLVQAGGSLRLSCAASGRTFSDYVMGWFRQAPGKERTFVARIGWSGDLTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCAADERWGTGGKFDYWGQGTQVTVSSHGSGLVPR | N.A. | EVQLVESGGGLVQAGGSLRLSCAASGRTFSDYVMGWFRQAPGKERTFVARIGWSGDLTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCAADERWGTGGKFDYWGQGTQVTVSS | N.A. | 13.48458 | 0 | 129 | 0 | 118 | 0 | 121 | 0 | 0 | nanobody 4c8 | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
6wzj_A_B | 6wzj | ly3041658 fab bound to cxcl2 | no | immune system | 2020-05-14 | 2020-11-25 | x-ray diffraction | 2.37 | 0.242 | 0.215 | 33183151 | 10.1080/19420862.2020.1831880 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | A | B | QVQLVQSGAEVKKPGASVKVSCKASGYEFTSYWIHWVRQAPGQGLEWMGNISPNSGSANYNEKFKSRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAREGPYSYYPSREYYGSDLWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQSISNNLHWYQQKPGQAPRLLIYYTSRSVSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCGQNNEWPEVFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYEFTSYWIHWVRQAPGQGLEWMGNISPNSGSANYNEKFKSRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAREGPYSYYPSREYYGSDLWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQSISNNLHWYQQKPGQAPRLLIYYTSRSVSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCGQNNEWPEVFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.202038 | 22.857424 | 224 | 214 | 221 | 213 | 224 | 213 | 100 | ly3041658 fab heavy chain | ly3041658 fab light chain | homo sapiens | homo sapiens | E | protein | c-x-c motif chemokine 2 | macaca fascicularis | 42 | 20 | 0.83 | HL | train |
6wzj_C_D | 6wzj | ly3041658 fab bound to cxcl2 | no | immune system | 2020-05-14 | 2020-11-25 | x-ray diffraction | 2.37 | 0.242 | 0.215 | 33183151 | 10.1080/19420862.2020.1831880 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | C | D | QVQLVQSGAEVKKPGASVKVSCKASGYEFTSYWIHWVRQAPGQGLEWMGNISPNSGSANYNEKFKSRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAREGPYSYYPSREYYGSDLWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQSISNNLHWYQQKPGQAPRLLIYYTSRSVSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCGQNNEWPEVFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYEFTSYWIHWVRQAPGQGLEWMGNISPNSGSANYNEKFKSRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAREGPYSYYPSREYYGSDLWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQSISNNLHWYQQKPGQAPRLLIYYTSRSVSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCGQNNEWPEVFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.462326 | 22.898659 | 224 | 214 | 222 | 213 | 224 | 213 | 101 | ly3041658 fab heavy chain | ly3041658 fab light chain | homo sapiens | homo sapiens | F | protein | c-x-c motif chemokine 2 | macaca fascicularis | 46 | 22 | 0.85 | HL | train |
6wzk_A_B | 6wzk | ly3041658 fab bound to cxcl3 | no | immune system | 2020-05-14 | 2020-11-25 | x-ray diffraction | 1.8 | 0.209 | 0.178 | 33183151 | 10.1080/19420862.2020.1831880 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | A | B | QVQLVQSGAEVKKPGASVKVSCKASGYEFTSYWIHWVRQAPGQGLEWMGNISPNSGSANYNEKFKSRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAREGPYSYYPSREYYGSDLWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQSISNNLHWYQQKPGQAPRLLIYYTSRSVSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCGQNNEWPEVFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGYEFTSYWIHWVRQAPGQGLEWMGNISPNSGSANYNEKFKSRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAREGPYSYYPSREYYGSDLWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQSISNNLHWYQQKPGQAPRLLIYYTSRSVSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCGQNNEWPEVFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.629938 | 23.215773 | 224 | 214 | 221 | 214 | 223 | 214 | 103 | ly3041658 fab heavy chain | ly3041658 fab light chain | homo sapiens | homo sapiens | E | protein | c-x-c motif chemokine 3 | macaca fascicularis | 49 | 24 | 0.86 | HL | train |
6wzk_C_D | 6wzk | ly3041658 fab bound to cxcl3 | no | immune system | 2020-05-14 | 2020-11-25 | x-ray diffraction | 1.8 | 0.209 | 0.178 | 33183151 | 10.1080/19420862.2020.1831880 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | C | D | QVQLVQSGAEVKKPGASVKVSCKASGYEFTSYWIHWVRQAPGQGLEWMGNISPNSGSANYNEKFKSRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAREGPYSYYPSREYYGSDLWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQSISNNLHWYQQKPGQAPRLLIYYTSRSVSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCGQNNEWPEVFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYEFTSYWIHWVRQAPGQGLEWMGNISPNSGSANYNEKFKSRVTMTRDTSTSTVYMELSSLRSEDTAVYYCAREGPYSYYPSREYYGSDLWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQSISNNLHWYQQKPGQAPRLLIYYTSRSVSGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCGQNNEWPEVFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.351078 | 23.008886 | 224 | 214 | 220 | 214 | 224 | 214 | 98 | ly3041658 fab heavy chain | ly3041658 fab light chain | homo sapiens | homo sapiens | F | protein | c-x-c motif chemokine 3 | macaca fascicularis | 49 | 24 | 0.86 | HL | train |
6wzn_A | 6wzn | crystal structure of a fluorescent single chain fv chimera | no | fluorescent protein | 2020-05-14 | 2021-01-27 | x-ray diffraction | 2.5 | 0.211 | 0.163 | 33586761 | 10.1093/protein/gzaa029 | 0 | auth_asym_id | VHVL+ | N.A. | N.A. | A | N.A. | GAHADIQMTQSPSFLSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPLTFGGGTRLEIKSGGSTITSVIKPEMKIKLRMEGAVNGHKFVIEGEGIGKPYEGTQTLDLTVEEGAPLPFSYDILTPAFQYGNRAFTKYPEDIPDYFKQAFPEGYSWERSMTYEDQGICIATSDITMEGDCFFYEIRFDGTNFPPNGPVMQKKTLKWEPSTEKMYVEDGVLKGDVEMALLLEGGGHYRCDFKTTYKAKKDVRLPDAHEVDHRIEILSHDKD... | N.A. | GAHADIQMTQSPSFLSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPLTFGGGTRLEIKSGGSTITSVIKPEMKIKLRMEGAVNGHKFVIEGEGIGKPYEGTQTLDLTVEEGAPLPFSYDILTPAFQYGNRAFTKYPEDIPDYFKQAFPEGYSWERSMTYEDQGICIATSDITMEGDCFFYEIRFDGTNFPPNGPVMQKKTLKWEPSTEKMYVEDGVLKGDVEMALLLEGGGHYRCDFKTTYKAKKDVRLPDAHEVDHRIEILSHDKD... | N.A. | 27.956547 | 0 | 465 | 0 | 459 | 0 | 464 | 0 | 0 | fluorescent single chain fv chimera | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
6wzt_H_L | 6wzt | cryoem structure of influenza hemagglutinin a/victoria/361/2011 in complex with cyno antibody 3b10 | no | antiviral protein | 2020-05-14 | 2021-03-10 | electron microscopy | 4.7 | N.A. | N.A. | 33658355 | 10.1126/scitranslmed.abe5449 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | L | QVQLQESGPGLVKPSETLSLTCAVSGGTFSAYYWGWIRQPPGKGLEWIGSISGGSGSTDYSPSLKSRATISRDTSKNQFSLKLTSVTAADTAVYYCVRKYWGDYYANWFDVWGPGVLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGGSKPPT | DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLQGGVPSRFSGSGSGSDFTLTISSLQSEDFATYYCQQYSGRPPTFGQGTKVEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTDYQSHNVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCAVSGGTFSAYYWGWIRQPPGKGLEWIGSISGGSGSTDYSPSLKSRATISRDTSKNQFSLKLTSVTAADTAVYYCVRKYWGDYYANWFDVWGPGVLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLQGGVPSRFSGSGSGSDFTLTISSLQSEDFATYYCQQYSGRPPTFGQGTKVEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTDYQSHNVYACEVTHQGLSSPVTKSFNRGEC | 21.627012 | 22.965166 | 233 | 214 | 225 | 214 | 225 | 214 | 101 | cyno antibody heavy chain | cyno antibody light chain | macaca fascicularis | macaca fascicularis | A | protein | hemagglutinin | influenza a virus | 44 | 19 | 0.9 | HL | train |
6wzt_E_D | 6wzt | cryoem structure of influenza hemagglutinin a/victoria/361/2011 in complex with cyno antibody 3b10 | no | antiviral protein | 2020-05-14 | 2021-03-10 | electron microscopy | 4.7 | N.A. | N.A. | 33658355 | 10.1126/scitranslmed.abe5449 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | E | D | QVQLQESGPGLVKPSETLSLTCAVSGGTFSAYYWGWIRQPPGKGLEWIGSISGGSGSTDYSPSLKSRATISRDTSKNQFSLKLTSVTAADTAVYYCVRKYWGDYYANWFDVWGPGVLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGGSKPPT | DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLQGGVPSRFSGSGSGSDFTLTISSLQSEDFATYYCQQYSGRPPTFGQGTKVEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTDYQSHNVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCAVSGGTFSAYYWGWIRQPPGKGLEWIGSISGGSGSTDYSPSLKSRATISRDTSKNQFSLKLTSVTAADTAVYYCVRKYWGDYYANWFDVWGPGVLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLQGGVPSRFSGSGSGSDFTLTISSLQSEDFATYYCQQYSGRPPTFGQGTKVEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTDYQSHNVYACEVTHQGLSSPVTKSFNRGEC | 21.649916 | 22.972185 | 233 | 214 | 225 | 214 | 225 | 214 | 104 | cyno antibody heavy chain | cyno antibody light chain | macaca fascicularis | macaca fascicularis | B | protein | hemagglutinin | influenza a virus | 39 | 17 | 0.89 | HL | train |
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