PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6xp6_H_G | 6xp6 | 3c11-dq2-glia-a2 complex | no | peptide binding protein | 2020-07-08 | 2021-07-28 | x-ray diffraction | 2.4 | 0.212 | 0.176 | 34417258 | 10.1126/sciimmunol.abg4925 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | G | QVQLVQSGAEVKKPGSSVKVSCKASGGTVRSRVHAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDVQRMGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIQMTQSPSSVSTSVGDRVTITCRASQDISNWLAWYQQKPGKAPKLLIYDSSTLQSGVPSRFSGSGSGTDFTLTISTLQPEDFATYYCQQFNSYPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGTVRSRVHAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDVQRMGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSVSTSVGDRVTITCRASQDISNWLAWYQQKPGKAPKLLIYDSSTLQSGVPSRFSGSGSGTDFTLTISTLQPEDFATYYCQQFNSYPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.827644 | 22.257147 | 224 | 214 | 220 | 212 | 220 | 212 | 107 | 3.c11 igh fab | 3.c11 igk fab | homo sapiens | homo sapiens | A;B;C | protein;protein;peptide | mhc class ii hla-dq-alpha chain;mhc class ii hla-dq-beta-1;dq2-glia-a2 peptide | homo sapiens;homo sapiens;triticum aestivum | 32;18;17 | 14;9;7 | 0.82;0.82;0.78 | HL | train |
6xp6_J_I | 6xp6 | 3c11-dq2-glia-a2 complex | no | peptide binding protein | 2020-07-08 | 2021-07-28 | x-ray diffraction | 2.4 | 0.212 | 0.176 | 34417258 | 10.1126/sciimmunol.abg4925 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | J | I | QVQLVQSGAEVKKPGSSVKVSCKASGGTVRSRVHAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDVQRMGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIQMTQSPSSVSTSVGDRVTITCRASQDISNWLAWYQQKPGKAPKLLIYDSSTLQSGVPSRFSGSGSGTDFTLTISTLQPEDFATYYCQQFNSYPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGTVRSRVHAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDVQRMGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSVSTSVGDRVTITCRASQDISNWLAWYQQKPGKAPKLLIYDSSTLQSGVPSRFSGSGSGTDFTLTISTLQPEDFATYYCQQFNSYPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.514532 | 21.717464 | 224 | 214 | 213 | 212 | 220 | 212 | 94 | 3.c11 igh fab | 3.c11 igk fab | homo sapiens | homo sapiens | D;E;F | protein;protein;peptide | mhc class ii hla-dq-alpha chain;mhc class ii hla-dq-beta-1;dq2-glia-a2 peptide | homo sapiens;homo sapiens;triticum aestivum | 33;21;16 | 15;12;7 | 0.79;0.86;0.88 | HL | train |
6xpx_B_C | 6xpx | human antibody s1v2-51 in complex with the influenza hemagglutinin head domain of a/aichi/2/1968 (x-31)(h3n2) | no | immune system/viral protein | 2020-07-09 | 2021-05-19 | x-ray diffraction | 2.6 | 0.215 | 0.185 | 34060327 | 10.1128/mBio.01144-21 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV4 | B | C | QVQLVESGGGVVQPGRSLRLSCVASGFTFRDSVMHWVRQAPGKGLEWVAVTSFDGGESYSADSVKGRFTISRDNSKSTLSLQMNILRPEDTGVYYCARDRGGLDVWGQGTTVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH | DIVMTQSPESLAVSLGERATINCKSSQSVSFGSSDKNYLGWYQQKPGQPPKLLINWASTRESGVSDRFRGTGSGTDFTLTISSLQAEDAAVYYCHQYYTPPYSFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGVVQPGRSLRLSCVASGFTFRDSVMHWVRQAPGKGLEWVAVTSFDGGESYSADSVKGRFTISRDNSKSTLSLQMNILRPEDTGVYYCARDRGGLDVWGQGTTVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIVMTQSPESLAVSLGERATINCKSSQSVSFGSSDKNYLGWYQQKPGQPPKLLINWASTRESGVSDRFRGTGSGTDFTLTISSLQAEDAAVYYCHQYYTPPYSFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.209812 | 22.96707 | 227 | 220 | 213 | 218 | 216 | 218 | 90 | s1v2-51 fab heavy chain | s1v2-51 fab light chain | homo sapiens | homo sapiens | A | protein | hemagglutinin | influenza a virus | 40 | 18 | 0.75 | HL | train |
6xq0_B_C | 6xq0 | human antibody s8v2-18 in complex with the influenza hemagglutinin head domain of a/california/7/2009(nymc-x181)(h1n1) | no | viral protein/immune system | 2020-07-09 | 2021-05-19 | x-ray diffraction | 2.3 | 0.268 | 0.222 | 34060327 | 10.1128/mBio.01144-21 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | B | C | EVQLVESGGGLVRPGGSLTLTCAGSGFMFRSYDMHWVRQAAGKGLEWVAGMGKGGETFYAGSVKGRFTISRENARNSLYLQMHSLRAGDTAVYYCARALTEWLFQRGTRNHYYYGMDVWGQGTTITVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH | EIVLTQSPGTLSLSPGERATLSCRASQIIDNKYLAWYQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTEFTLIISRLEPEDLAVYYCQQFGSSVYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVRPGGSLTLTCAGSGFMFRSYDMHWVRQAAGKGLEWVAGMGKGGETFYAGSVKGRFTISRENARNSLYLQMHSLRAGDTAVYYCARALTEWLFQRGTRNHYYYGMDVWGQGTTITVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | EIVLTQSPGTLSLSPGERATLSCRASQIIDNKYLAWYQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTEFTLIISRLEPEDLAVYYCQQFGSSVYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.231901 | 23.573723 | 240 | 215 | 230 | 213 | 230 | 213 | 96 | antibody s8v2-18 heavy chain | antibody s8v2-18 light chain | homo sapiens | homo sapiens | A | protein | hemagglutinin | influenza a virus (a/reassortant/nymc x-181a(a/nymc x-157 x california/07/2009)(h1n1)) | 43 | 16 | 0.94 | HL | train |
6xq0_E_F | 6xq0 | human antibody s8v2-18 in complex with the influenza hemagglutinin head domain of a/california/7/2009(nymc-x181)(h1n1) | no | viral protein/immune system | 2020-07-09 | 2021-05-19 | x-ray diffraction | 2.3 | 0.268 | 0.222 | 34060327 | 10.1128/mBio.01144-21 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | E | F | EVQLVESGGGLVRPGGSLTLTCAGSGFMFRSYDMHWVRQAAGKGLEWVAGMGKGGETFYAGSVKGRFTISRENARNSLYLQMHSLRAGDTAVYYCARALTEWLFQRGTRNHYYYGMDVWGQGTTITVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH | EIVLTQSPGTLSLSPGERATLSCRASQIIDNKYLAWYQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTEFTLIISRLEPEDLAVYYCQQFGSSVYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVRPGGSLTLTCAGSGFMFRSYDMHWVRQAAGKGLEWVAGMGKGGETFYAGSVKGRFTISRENARNSLYLQMHSLRAGDTAVYYCARALTEWLFQRGTRNHYYYGMDVWGQGTTITVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | EIVLTQSPGTLSLSPGERATLSCRASQIIDNKYLAWYQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTEFTLIISRLEPEDLAVYYCQQFGSSVYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.548946 | 23.279877 | 240 | 215 | 230 | 213 | 230 | 213 | 97 | antibody s8v2-18 heavy chain | antibody s8v2-18 light chain | homo sapiens | homo sapiens | D | protein | hemagglutinin | influenza a virus (a/reassortant/nymc x-181a(a/nymc x-157 x california/07/2009)(h1n1)) | 45 | 17 | 0.89 | HL | train |
6xq4_C_B | 6xq4 | human antibody s8v2-47 in complex with the influenza hemagglutinin head domain of a/beijing/262/1995(h1n1) | no | viral protein/immune system | 2020-07-09 | 2021-05-19 | x-ray diffraction | 3.35 | 0.279 | 0.238 | 34060327 | 10.1128/mBio.01144-21 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV4 | C | B | EVQLVESGGGLVQPGGSLRLSCAASGFTVSRNYMSWVRQAPGKGLEWVSIIYSGDDTYYADSVKGRFTISRDNSKNTLYLEMNSLRAEDTAVYYCARGEMGDGYYWAPFDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH | DIVMTQSPDSLAVSLGERATINCKSSQSLLYSSRNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRLSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSIPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTVSRNYMSWVRQAPGKGLEWVSIIYSGDDTYYADSVKGRFTISRDNSKNTLYLEMNSLRAEDTAVYYCARGEMGDGYYWAPFDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIVMTQSPDSLAVSLGERATINCKSSQSLLYSSRNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRLSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSIPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.338503 | 23.7889 | 233 | 220 | 223 | 218 | 223 | 218 | 103 | antibody s8v2-47 heavy chain | antibody s8v2-47 light chain | homo sapiens | homo sapiens | A | protein | hemagglutinin | influenza a virus (a/beijing/262/1995(h1n1)) | 37 | 20 | 0.95 | HL | train |
6xq4_E_F | 6xq4 | human antibody s8v2-47 in complex with the influenza hemagglutinin head domain of a/beijing/262/1995(h1n1) | no | viral protein/immune system | 2020-07-09 | 2021-05-19 | x-ray diffraction | 3.35 | 0.279 | 0.238 | 34060327 | 10.1128/mBio.01144-21 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV4 | E | F | EVQLVESGGGLVQPGGSLRLSCAASGFTVSRNYMSWVRQAPGKGLEWVSIIYSGDDTYYADSVKGRFTISRDNSKNTLYLEMNSLRAEDTAVYYCARGEMGDGYYWAPFDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH | DIVMTQSPDSLAVSLGERATINCKSSQSLLYSSRNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRLSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSIPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTVSRNYMSWVRQAPGKGLEWVSIIYSGDDTYYADSVKGRFTISRDNSKNTLYLEMNSLRAEDTAVYYCARGEMGDGYYWAPFDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIVMTQSPDSLAVSLGERATINCKSSQSLLYSSRNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRLSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSIPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.935085 | 23.838793 | 233 | 220 | 223 | 218 | 223 | 218 | 98 | antibody s8v2-47 heavy chain | antibody s8v2-47 light chain | homo sapiens | homo sapiens | D | protein | hemagglutinin | influenza a virus (a/beijing/262/1995(h1n1)) | 34 | 19 | 0.95 | HL | train |
6zqk_B_A | 6zqk | her2-binding scfv-fab fusion 841 | no | antitumor protein | 2020-07-09 | 2021-06-30 | x-ray diffraction | 2.2 | 0.241 | 0.202 | 34145240 | 10.1038/s41467-021-23948-6 | 0 | auth_asym_id | FabH:VHVL+ | IGHV1 | N.A. | B | A | QVQLVQSGAEVKKPGASVKVSCKASGYSFTGYFINWVREAPGQGLEWMGHISSSYATSTYNQKFQGRVTFTVDTSSSTAYMELSSLRSEDTAVYYCVRSGNYEEYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLESVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSDIVLTQSPDSLAVSLGERATINCRSSQTLLYSNNQKNYLAWYQKKPGQPPKLLISWAFTRKSGVPDRFSGS... | QVQLVQSGAEVKKPGASVKVSCKASGYSFTGYFINWVREAPGQGLEWMGHISSSYATSTYNQKFQGRVTFTVDTSSSTAYMELSSLRSEDTAVYYCVRSGNYEEYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLESVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSDIVLTQSPDSLAVSLGERATINCRSSQTLLYSNNQKNYLAWYQKKPGQPPKLLISWAFTRKSGVPDRFSGS... | 21.734354 | 33.144535 | 223 | 469 | 215 | 442 | 221 | 466 | 116 | 841 light chain | 841 heavy chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
6zqk_D_C | 6zqk | her2-binding scfv-fab fusion 841 | no | antitumor protein | 2020-07-09 | 2021-06-30 | x-ray diffraction | 2.2 | 0.241 | 0.202 | 34145240 | 10.1038/s41467-021-23948-6 | 0 | auth_asym_id | FabH:VHVL+ | IGHV1 | N.A. | D | C | QVQLVQSGAEVKKPGASVKVSCKASGYSFTGYFINWVREAPGQGLEWMGHISSSYATSTYNQKFQGRVTFTVDTSSSTAYMELSSLRSEDTAVYYCVRSGNYEEYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLESVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSDIVLTQSPDSLAVSLGERATINCRSSQTLLYSNNQKNYLAWYQKKPGQPPKLLISWAFTRKSGVPDRFSGS... | QVQLVQSGAEVKKPGASVKVSCKASGYSFTGYFINWVREAPGQGLEWMGHISSSYATSTYNQKFQGRVTFTVDTSSSTAYMELSSLRSEDTAVYYCVRSGNYEEYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLESVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSDIVLTQSPDSLAVSLGERATINCRSSQTLLYSNNQKNYLAWYQKKPGQPPKLLISWAFTRKSGVPDRFSGS... | 21.676981 | 32.976505 | 223 | 469 | 213 | 443 | 220 | 467 | 114 | 841 light chain | 841 heavy chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
6xqw_H_L | 6xqw | crystal structure of malim03 fab in complex with pfmsp1-19 | no | immune system | 2020-07-10 | 2021-03-03 | x-ray diffraction | 2.99 | 0.309 | 0.252 | 33661302 | 10.1084/jem.20200942 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV1 | H | L | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWTWIRQPPGKGLEWIGEINNSGKTNYNPSLKSRVSISIDTSKNQFSLKVTSVTAADTAVYYCARGPQQHLEPPFDYWGHGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | QSVLTQPPSASGTPGQRVTISCSGSNSNIATNYVCWYQQYPGTAPKPLIYRTDQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCATWDDSLSAWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWTWIRQPPGKGLEWIGEINNSGKTNYNPSLKSRVSISIDTSKNQFSLKVTSVTAADTAVYYCARGPQQHLEPPFDYWGHGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | VLTQPPSASGTPGQRVTISCSGSNSNIATNYVCWYQQYPGTAPKPLIYRTDQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCATWDDSLSAWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 20.548882 | 23.74291 | 223 | 216 | 219 | 212 | 221 | 212 | 89 | malim03 fab heavy chain | malim03 fab light chain | homo sapiens | homo sapiens | E | protein | pfmsp1-19 | plasmodium falciparum | 28 | 12 | 0.67 | HL | train |
6zrv_B | 6zrv | crystal structure of stabilized active plasminogen activator inhibitor-1 (pai-1-w175f) in complex with an inhibitory nanobody (vhh-s-a93, nb93) | yes | hydrolase | 2020-07-15 | 2020-08-26 | x-ray diffraction | 1.88 | 0.233 | 0.197 | 32824134 | 10.3390/ijms21165859 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGFSLDNYAIGWFRQAPGKEREGVSCISSSDGSTYYTDSVEGRFTISRDNAKNTVYLQMNSLKPDDTAVYYCAADYGSSWCTFNGMDYWGQGTQVTVSS | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGFSLDNYAIGWFRQAPGKEREGVSCISSSDGSTYYTDSVEGRFTISRDNAKNTVYLQMNSLKPDDTAVYYCAADYGSSWCTFNGMDYWGQGTQVTVSS | N.A. | 13.51795 | 0 | 123 | 0 | 123 | 0 | 123 | 0 | 0 | vhh-s-a93 (nb93) | N.A. | vicugna pacos | N.A. | A | protein | plasminogen activator inhibitor 1 | homo sapiens | 51 | 10 | 0.38 | H_only | train |
6xsk_I_K | 6xsk | cryo-em structure of vaccine-elicited rhesus antibody 789-203-3c12 in complex with stabilized si06 (a/solomon islands/3/06) influenza hemagglutinin trimer | no | immune system/viral protein | 2020-07-15 | 2021-07-21 | electron microscopy | 3.85 | N.A. | N.A. | 36356572 | 10.1016/j.immuni.2022.10.015 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | I | K | QVQLQESGPGLVKPSEILSLTCAVSGGSFSSYCWGWIRQPPGKGLEWIGSICGSGGSNYLNPSLKSRVTLSVDTSKNQFSLILNSVTAADTAVYYCAREGITIFGVVIPRVLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQD... | DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPNLLIYRASTLQSGVPSRFSGSGSGTDFTLTISSLQSEDFATYFCQQSTSSPFTFGPGTKLDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSEILSLTCAVSGGSFSSYCWGWIRQPPGKGLEWIGSICGSGGSNYLNPSLKSRVTLSVDTSKNQFSLILNSVTAADTAVYYCAREGITIFGVVIPRVLDSWGQGAVVTVSS | DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPNLLIYRASTLQSGVPSRFSGSGSGTDFTLTISSLQSEDFATYFCQQSTSSPFTFGPGTKLDIK | 14.17058 | 13.292862 | 455 | 214 | 125 | 107 | 125 | 107 | 42 | 789-203-3c12 fab heavy chain | 789-203-3c12 fab light chain | macaca mulatta | macaca mulatta | B | protein | hemagglutinin ha2 chain | influenza a virus (a/solomon islands/3/2006(h1n1)) | 50 | 22 | 0.81 | HL | train |
6xsk_G_J | 6xsk | cryo-em structure of vaccine-elicited rhesus antibody 789-203-3c12 in complex with stabilized si06 (a/solomon islands/3/06) influenza hemagglutinin trimer | no | immune system/viral protein | 2020-07-15 | 2021-07-21 | electron microscopy | 3.85 | N.A. | N.A. | 36356572 | 10.1016/j.immuni.2022.10.015 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | G | J | QVQLQESGPGLVKPSEILSLTCAVSGGSFSSYCWGWIRQPPGKGLEWIGSICGSGGSNYLNPSLKSRVTLSVDTSKNQFSLILNSVTAADTAVYYCAREGITIFGVVIPRVLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQD... | DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPNLLIYRASTLQSGVPSRFSGSGSGTDFTLTISSLQSEDFATYFCQQSTSSPFTFGPGTKLDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSEILSLTCAVSGGSFSSYCWGWIRQPPGKGLEWIGSICGSGGSNYLNPSLKSRVTLSVDTSKNQFSLILNSVTAADTAVYYCAREGITIFGVVIPRVLDSWGQGAVVTVSS | DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPNLLIYRASTLQSGVPSRFSGSGSGTDFTLTISSLQSEDFATYFCQQSTSSPFTFGPGTKLDIK | 14.251274 | 13.337558 | 455 | 214 | 125 | 107 | 125 | 107 | 41 | 789-203-3c12 fab heavy chain | 789-203-3c12 fab light chain | macaca mulatta | macaca mulatta | D | protein | hemagglutinin ha2 chain | influenza a virus (a/solomon islands/3/2006(h1n1)) | 47 | 22 | 0.85 | HL | train |
6xsk_H_L | 6xsk | cryo-em structure of vaccine-elicited rhesus antibody 789-203-3c12 in complex with stabilized si06 (a/solomon islands/3/06) influenza hemagglutinin trimer | no | immune system/viral protein | 2020-07-15 | 2021-07-21 | electron microscopy | 3.85 | N.A. | N.A. | 36356572 | 10.1016/j.immuni.2022.10.015 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQLQESGPGLVKPSEILSLTCAVSGGSFSSYCWGWIRQPPGKGLEWIGSICGSGGSNYLNPSLKSRVTLSVDTSKNQFSLILNSVTAADTAVYYCAREGITIFGVVIPRVLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQD... | DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPNLLIYRASTLQSGVPSRFSGSGSGTDFTLTISSLQSEDFATYFCQQSTSSPFTFGPGTKLDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSEILSLTCAVSGGSFSSYCWGWIRQPPGKGLEWIGSICGSGGSNYLNPSLKSRVTLSVDTSKNQFSLILNSVTAADTAVYYCAREGITIFGVVIPRVLDSWGQGAVVTVSS | DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPNLLIYRASTLQSGVPSRFSGSGSGTDFTLTISSLQSEDFATYFCQQSTSSPFTFGPGTKLDIK | 14.207065 | 13.340546 | 455 | 214 | 125 | 107 | 125 | 107 | 41 | 789-203-3c12 fab heavy chain | 789-203-3c12 fab light chain | macaca mulatta | macaca mulatta | F | protein | hemagglutinin ha2 chain | influenza a virus (a/solomon islands/3/2006(h1n1)) | 45 | 21 | 0.78 | HL | train |
6xsn_H_L | 6xsn | crystal structure of nhp vd20.5a4 fab in complex with 16055 v1v2 1fd6 scaffold | no | immune system | 2020-07-15 | 2021-07-21 | x-ray diffraction | 2.87 | 0.267 | 0.221 | 34559844 | 10.1371/journal.ppat.1009543 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | L | QVQLQESGPGLVKPSETLSLTCAVSGASISSNYWSWIRQPPGKGLEWIGRIYDPTDSTDYNPSLESRATISKDTSKNHFSLTLSSVTAADTAVYFCARGLWSGYFFWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQMTQSPSSLSASVGDSVTVTCRASQGIDKELSWYQQKPGKAPTLLIYAASSLQTGVSSRFSGSGSGTDYTLTISSLQPEDVATYYCLQDYATPYSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCAVSGASISSNYWSWIRQPPGKGLEWIGRIYDPTDSTDYNPSLESRATISKDTSKNHFSLTLSSVTAADTAVYFCARGLWSGYFFWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQMTQSPSSLSASVGDSVTVTCRASQGIDKELSWYQQKPGKAPTLLIYAASSLQTGVSSRFSGSGSGTDYTLTISSLQPEDVATYYCLQDYATPYSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 20.631948 | 23.37009 | 224 | 214 | 214 | 214 | 221 | 214 | 92 | vd20.5a4_heavy_chain | vd20.5a4_light_chain | macaca mulatta | macaca mulatta | C | protein | 16055_v1v2-1fd6 | macaca mulatta | 25 | 15 | 1 | HL | train |
6xsw_A_B | 6xsw | structure of the notch3 nrr in complex with an antibody fab fragment | no | signaling protein/immune system | 2020-07-16 | 2021-07-21 | x-ray diffraction | 2.98 | 0.256 | 0.233 | 34095881 | 10.1016/j.xcrm.2021.100279 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | EVQLVESGGGLVQPGGSLRLSCAASGYAFTDYWMTWVRQAPGKGLEWVAEISPNSGGTNFNEKFKGRFTISVDNAKNSLYLQMNSLRAEDTAVYYCARGEIRYNWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPC | DIQMTQSPSSLSASVGDRVTITCKASQNVGNNIAWYQQKPGKAPKLLIYYASNRYTGVPSRFSGSGYGTDFTLTISSLQPEDFATYYCQRLYNSPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGYAFTDYWMTWVRQAPGKGLEWVAEISPNSGGTNFNEKFKGRFTISVDNAKNSLYLQMNSLRAEDTAVYYCARGEIRYNWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCKASQNVGNNIAWYQQKPGKAPKLLIYYASNRYTGVPSRFSGSGYGTDFTLTISSLQPEDFATYYCQRLYNSPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.757236 | 23.639555 | 231 | 214 | 215 | 211 | 220 | 213 | 103 | anti-n3 fab heavy chain | anti-n3 fab light chain | rattus norvegicus | rattus norvegicus | C | protein | neurogenic locus notch homolog protein 3 | homo sapiens | 61 | 20 | 0.65 | HL | train |
6xsw_D_E | 6xsw | structure of the notch3 nrr in complex with an antibody fab fragment | no | signaling protein/immune system | 2020-07-16 | 2021-07-21 | x-ray diffraction | 2.98 | 0.256 | 0.233 | 34095881 | 10.1016/j.xcrm.2021.100279 | 0 | auth_asym_id | FabH:VL+ | IGHV3 | IGKV1 | D | E | EVQLVESGGGLVQPGGSLRLSCAASGYAFTDYWMTWVRQAPGKGLEWVAEISPNSGGTNFNEKFKGRFTISVDNAKNSLYLQMNSLRAEDTAVYYCARGEIRYNWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPC | DIQMTQSPSSLSASVGDRVTITCKASQNVGNNIAWYQQKPGKAPKLLIYYASNRYTGVPSRFSGSGYGTDFTLTISSLQPEDFATYYCQRLYNSPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGYAFTDYWMTWVRQAPGKGLEWVAEISPNSGGTNFNEKFKGRFTISVDNAKNSLYLQMNSLRAEDTAVYYCARGEIRYNWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVD | DIQMTQSPSSLSASVGDRVTITCKASQNVGNNIAWYQQKPGKAPKLLIYYASNRYTGVPSRFSGSGYGTDFTLTISSLQPEDFATYYCQRLYNSPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLS | 19.88012 | 19.132822 | 231 | 214 | 184 | 144 | 214 | 176 | 72 | anti-n3 fab heavy chain | anti-n3 fab light chain | rattus norvegicus | rattus norvegicus | F | protein | neurogenic locus notch homolog protein 3 | homo sapiens | 65 | 23 | 0.7 | HL | train |
6xsw_G_I | 6xsw | structure of the notch3 nrr in complex with an antibody fab fragment | no | signaling protein/immune system | 2020-07-16 | 2021-07-21 | x-ray diffraction | 2.98 | 0.256 | 0.233 | 34095881 | 10.1016/j.xcrm.2021.100279 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | G | I | EVQLVESGGGLVQPGGSLRLSCAASGYAFTDYWMTWVRQAPGKGLEWVAEISPNSGGTNFNEKFKGRFTISVDNAKNSLYLQMNSLRAEDTAVYYCARGEIRYNWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPC | DIQMTQSPSSLSASVGDRVTITCKASQNVGNNIAWYQQKPGKAPKLLIYYASNRYTGVPSRFSGSGYGTDFTLTISSLQPEDFATYYCQRLYNSPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGYAFTDYWMTWVRQAPGKGLEWVAEISPNSGGTNFNEKFKGRFTISVDNAKNSLYLQMNSLRAEDTAVYYCARGEIRYNWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCKASQNVGNNIAWYQQKPGKAPKLLIYYASNRYTGVPSRFSGSGYGTDFTLTISSLQPEDFATYYCQRLYNSPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.161907 | 22.41074 | 231 | 214 | 215 | 211 | 219 | 211 | 101 | anti-n3 fab heavy chain | anti-n3 fab light chain | rattus norvegicus | rattus norvegicus | J | protein | neurogenic locus notch homolog protein 3 | homo sapiens | 52 | 17 | 0.68 | HL | train |
6xsw_H_L | 6xsw | structure of the notch3 nrr in complex with an antibody fab fragment | no | signaling protein/immune system | 2020-07-16 | 2021-07-21 | x-ray diffraction | 2.98 | 0.256 | 0.233 | 34095881 | 10.1016/j.xcrm.2021.100279 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGYAFTDYWMTWVRQAPGKGLEWVAEISPNSGGTNFNEKFKGRFTISVDNAKNSLYLQMNSLRAEDTAVYYCARGEIRYNWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPC | DIQMTQSPSSLSASVGDRVTITCKASQNVGNNIAWYQQKPGKAPKLLIYYASNRYTGVPSRFSGSGYGTDFTLTISSLQPEDFATYYCQRLYNSPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGYAFTDYWMTWVRQAPGKGLEWVAEISPNSGGTNFNEKFKGRFTISVDNAKNSLYLQMNSLRAEDTAVYYCARGEIRYNWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCKASQNVGNNIAWYQQKPGKAPKLLIYYASNRYTGVPSRFSGSGYGTDFTLTISSLQPEDFATYYCQRLYNSPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.887043 | 23.731861 | 231 | 214 | 217 | 213 | 220 | 213 | 104 | anti-n3 fab heavy chain | anti-n3 fab light chain | rattus norvegicus | rattus norvegicus | X | protein | neurogenic locus notch homolog protein 3 | homo sapiens | 62 | 21 | 0.68 | HL | train |
6ztd_H_L | 6ztd | crystal structure of the bcr fab fragment from subset #169 case p6540 | no | immune system | 2020-07-18 | 2021-05-26 | x-ray diffraction | 3.43 | 0.263 | 0.217 | 33036024 | 10.1182/blood.2020005216 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFTFSDYNMNWVRQAPGKGLQWVSYISDSASTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAMYYCARDGVGAPLWGQGTTVTVSSGSASAPTLFPLVSCENSPSDTSSVLVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMQGTDEHVVCKVQHPNGNKEKNVPLPV | SYVLTQPPSVSVAPGKTARISCGGNNIGSKSVHWYQQKPGQAPVLVIYYDTDRPSGIPERFSGSNSGNTATLTISRVEAGDEAGYYCQVWDSSSDHPWVFGGGTKLTVLRQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGGGLVQPGGSLRLSCAASGFTFSDYNMNWVRQAPGKGLQWVSYISDSASTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAMYYCARDGVGAPLWGQGTTVTVSSGSASAPTLFPLVSCENSPSDTSSVLVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMQGTDEHVVCKVQHPNGNKEKNVP | YVLTQPPSVSVAPGKTARISCGGNNIGSKSVHWYQQKPGQAPVLVIYYDTDRPSGIPERFSGSNSGNTATLTISRVEAGDEAGYYCQVWDSSSDHPWVFGGGTKLTVLRQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 19.437338 | 23.959213 | 221 | 215 | 187 | 212 | 217 | 212 | 101 | heavy chain of the fab fragment from bcr derived from the p6540 cll clone | light chain of the fab fragment from bcr derived from the p6540 cll clone | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7jgj_H_L | 7jgj | iga1 protease in complex with neutralizing mab | no | immune system | 2020-07-19 | 2020-12-09 | electron microscopy | 4.8 | N.A. | N.A. | 33247098 | 10.1038/s41467-020-19887-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV6 | H | L | EVQLQQSGPELEKPGASMKISCKASGYSFTGYNMNWVKQSNGKSLEWIGSIDPYTGGSNYNQKFMGKATLTVDKSSSTAYMQLKSLTSEDSAVYYCATVVGRVYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | EEVLTQSPAIMSASPGEKVTMTCSASSSVSYIHWYQQKSNTSPKLWIYATSKLASGVPGRFSGSGSGNSYSLTISSMEAEDVATYYCFQGSGYPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGPELEKPGASMKISCKASGYSFTGYNMNWVKQSNGKSLEWIGSIDPYTGGSNYNQKFMGKATLTVDKSSSTAYMQLKSLTSEDSAVYYCATVVGRVYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | EEVLTQSPAIMSASPGEKVTMTCSASSSVSYIHWYQQKSNTSPKLWIYATSKLASGVPGRFSGSGSGNSYSLTISSMEAEDVATYYCFQGSGYPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | 22.231369 | 23.119463 | 218 | 213 | 218 | 212 | 218 | 212 | 101 | mab heavy chain | mab light chain | mus musculus | mus musculus | A | protein | immunoglobulin a1 protease | streptococcus pneumoniae | 56 | 24 | 0.8 | HL | train |
7ckw_N | 7ckw | cryo-em structure of fenoldopam bound dopamine receptor drd1-gs signaling complex | yes | cell cycle | 2020-07-20 | 2021-03-03 | electron microscopy | 3.22 | N.A. | N.A. | 33571432 | 10.1016/j.cell.2021.01.028 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.477831 | 0 | 156 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 57;36 | 16;11 | 0.52;0.69 | H_only | train |
7ckx_N | 7ckx | cryo-em structure of a77636 bound dopamine receptor drd1-gs signaling complex | yes | cell cycle | 2020-07-20 | 2021-03-03 | electron microscopy | 3.54 | N.A. | N.A. | 33571432 | 10.1016/j.cell.2021.01.028 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.645241 | 0 | 156 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 56;38 | 15;12 | 0.52;0.71 | H_only | train |
7cky_N | 7cky | cryo-em structure of pw0464 bound dopamine receptor drd1-gs signaling complex | yes | cell cycle | 2020-07-20 | 2021-03-03 | electron microscopy | 3.2 | N.A. | N.A. | 33571432 | 10.1016/j.cell.2021.01.028 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.421802 | 0 | 156 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 51;36 | 14;11 | 0.5;0.61 | H_only | train |
7ckz_N | 7ckz | cryo-em structure of dopamine and ly3154207 bound dopamine receptor drd1-gs signaling complex | yes | cell cycle | 2020-07-20 | 2021-03-03 | electron microscopy | 3.1 | N.A. | N.A. | 33571432 | 10.1016/j.cell.2021.01.028 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.421589 | 0 | 156 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 52;36 | 14;11 | 0.48;0.65 | H_only | train |
6ztr_H_L | 6ztr | crystal structure of the anti-human p-cadherin fab cqy684 in complex with human p-cadherin(108-324) | no | immune system | 2020-07-20 | 2021-05-05 | x-ray diffraction | 2.1 | 0.221 | 0.192 | 33879555 | 10.1158/1535-7163.MCT-20-0708 | 0 | auth_asym_id | FabH:FabL | IGHV6 | IGKV1 | H | L | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSQSAAWNWIRQSPSRGLEWLGRIYYRSKWYNDYALSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARGEGYGREGFAIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSEFDYKDDDDKGAPHHHHHH | DIQMTQSPSSLSASVGDRVTITCRASQTISNTLAWYQQKPGKAPKLLIYAASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYLSWFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSQSAAWNWIRQSPSRGLEWLGRIYYRSKWYNDYALSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARGEGYGREGFAIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSEFDY | DIQMTQSPSSLSASVGDRVTITCRASQTISNTLAWYQQKPGKAPKLLIYAASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYLSWFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.09478 | 22.98622 | 244 | 213 | 229 | 210 | 229 | 210 | 95 | cqy684 fab heavy-chain | cqy684 fab light-chain | homo sapiens | homo sapiens | I | protein | cadherin-3 | homo sapiens | 44 | 15 | 0.65 | HL | train |
6ztr_A_B | 6ztr | crystal structure of the anti-human p-cadherin fab cqy684 in complex with human p-cadherin(108-324) | no | immune system | 2020-07-20 | 2021-05-05 | x-ray diffraction | 2.1 | 0.221 | 0.192 | 33879555 | 10.1158/1535-7163.MCT-20-0708 | 0 | auth_asym_id | FabH:FabL | IGHV6 | IGKV1 | A | B | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSQSAAWNWIRQSPSRGLEWLGRIYYRSKWYNDYALSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARGEGYGREGFAIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSEFDYKDDDDKGAPHHHHHH | DIQMTQSPSSLSASVGDRVTITCRASQTISNTLAWYQQKPGKAPKLLIYAASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYLSWFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSQSAAWNWIRQSPSRGLEWLGRIYYRSKWYNDYALSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARGEGYGREGFAIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSEFDY | DIQMTQSPSSLSASVGDRVTITCRASQTISNTLAWYQQKPGKAPKLLIYAASNLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYLSWFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.56125 | 22.745754 | 244 | 213 | 229 | 210 | 229 | 210 | 94 | cqy684 fab heavy-chain | cqy684 fab light-chain | homo sapiens | homo sapiens | J | protein | cadherin-3 | homo sapiens | 38 | 14 | 0.7 | HL | train |
7jhg_H_L | 7jhg | cryo-em structure of atp-bound fully inactive ampk in complex with dorsomorphin (compound c) and fab-nanobody | no | transferase/immune system | 2020-07-20 | 2021-07-21 | electron microscopy | 3.47 | N.A. | N.A. | 34437114 | 10.1126/science.abe7565 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNIYYYSIHWVRQAPGKGLEWVASIYPYSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYPYFISYYSKMEAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSGPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIYYYSIHWVRQAPGKGLEWVASIYPYSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYPYFISYYSKMEAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | QMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSGPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.879349 | 22.479578 | 237 | 215 | 228 | 211 | 228 | 211 | 110 | fab heavy chain | fab light chain | synthetic construct | synthetic construct | A | protein | 5'-amp-activated protein kinase catalytic subunit alpha-1 | homo sapiens | 68 | 26 | 0.81 | HL | train |
7jhg_N | 7jhg | cryo-em structure of atp-bound fully inactive ampk in complex with dorsomorphin (compound c) and fab-nanobody | no | transferase/immune system | 2020-07-20 | 2021-07-21 | electron microscopy | 3.47 | N.A. | N.A. | 34437114 | 10.1126/science.abe7565 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAMHHHHHHGENLYFQGSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 14.192856 | 0 | 159 | 0 | 120 | 0 | 120 | 0 | 0 | nanobody | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7jhh_H_L | 7jhh | cryo-em structure of atp-bound fully inactive ampk in complex with fab and nanobody | no | transferase/immune system | 2020-07-20 | 2021-07-21 | electron microscopy | 3.92 | N.A. | N.A. | 34437114 | 10.1126/science.abe7565 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNIYYYSIHWVRQAPGKGLEWVASIYPYSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYPYFISYYSKMEAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSGPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIYYYSIHWVRQAPGKGLEWVASIYPYSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYYPYFISYYSKMEAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | QMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSGPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.882214 | 22.52294 | 237 | 215 | 228 | 211 | 228 | 211 | 113 | fab heavy chain | fab light chain | synthetic construct | synthetic construct | A | protein | 5'-amp-activated protein kinase catalytic subunit alpha-1 | homo sapiens | 68 | 25 | 0.81 | HL | train |
7jhh_N | 7jhh | cryo-em structure of atp-bound fully inactive ampk in complex with fab and nanobody | no | transferase/immune system | 2020-07-20 | 2021-07-21 | electron microscopy | 3.92 | N.A. | N.A. | 34437114 | 10.1126/science.abe7565 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAMHHHHHHGENLYFQGSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 14.204542 | 0 | 159 | 0 | 120 | 0 | 120 | 0 | 0 | nanobody | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7jix_H_L | 7jix | murine antibody that engages the influenza hemagglutinin receptor binding site | no | viral protein/immune system | 2020-07-23 | 2021-07-28 | x-ray diffraction | 3.9 | 0.255 | 0.215 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV7 | H | L | ASEVQLQESGPELVKPGASVKISCKASGYAFSRSWMNWVKQRPGKGLEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARGSNSFAYWGQGTLVTVSGAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGHHHHHH | ASDIVLTQSPASLAVSLGQRATISCKASQSVDFDGDSYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSSEDPYTFGGGTKLEIKRADGAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQESGPELVKPGASVKISCKASGYAFSRSWMNWVKQRPGKGLEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCARGSNSFAYWGQGTLVTVSGAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCG | DIVLTQSPASLAVSLGQRATISCKASQSVDFDGDSYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSSEDPYTFGGGTKLEIKRADGAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 21.307682 | 23.464382 | 227 | 220 | 219 | 216 | 219 | 216 | 100 | fab heavy chain | fab light chain | mus musculus | mus musculus | A | protein | hemagglutinin ha1 chain | influenza a virus (a/solomon islands/3/2006 (egg passage)(h1n1)) | 71 | 21 | 0.64 | HL | train |
6zvf_H_L | 6zvf | crystal structure of the recombinant fab fragment derived from the hybridoma m3/38 in complex with a human galectin-3 peptide | yes | immune system | 2020-07-24 | 2021-04-14 | x-ray diffraction | 1.9 | 0.243 | 0.203 | 33795750 | 10.1038/s41598-021-86641-0 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV2 | H | L | QIQLVQSGPELKKPGESVKISCKASGYTFTDYAIHWVKQAPGKGLKWMGWINTYTGKPIYADDFKGRFVFSLEASASTANLQISNLKNEDTATYLCARGTMMASLDYWGQGVMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH | DVVMTQTPVSLSLAIGQPASISCKSSQSLVHSDGKTYLSWILQRPGQSPKGLIYLVSKLDSGVPDRFSGSGSETEFTLKISRVEAEDLGVYYCWQATHFPLTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QIQLVQSGPELKKPGESVKISCKASGYTFTDYAIHWVKQAPGKGLKWMGWINTYTGKPIYADDFKGRFVFSLEASASTANLQISNLKNEDTATYLCARGTMMASLDYWGQGVMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DVVMTQTPVSLSLAIGQPASISCKSSQSLVHSDGKTYLSWILQRPGQSPKGLIYLVSKLDSGVPDRFSGSGSETEFTLKISRVEAEDLGVYYCWQATHFPLTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 20.810532 | 24.16079 | 227 | 219 | 221 | 219 | 221 | 219 | 105 | chimeric fab m3/38 (l,h) | chimeric fab m3/38 (l,h) | rattus norvegicus | rattus norvegicus | P | peptide | galectin-3 | homo sapiens | 34 | 18 | 0.72 | HL | train |
7cmk_H_L | 7cmk | e30 e-particle in complex with 6c5 | no | virus | 2020-07-27 | 2020-08-12 | electron microscopy | 3.4 | N.A. | N.A. | 32887892 | 10.1038/s41467-020-18250-w | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLQQSGSELVRPGASVKLSCRASGYTFTTYWMHWVKQRPGQGLEWIGNIYPHSGNTNYDERFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTRDLRGFAYWGQGTTVTVSSPKTTPPSVYPLAPAAASTAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIELTQSPAIMSASPGEKVTMTCSASSSLRYMHWYQQKSGTSPKRWIYDTYNLASGVPVRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLQQSGSELVRPGASVKLSCRASGYTFTTYWMHWVKQRPGQGLEWIGNIYPHSGNTNYDERFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCTRDLRGFAYWGQGTTVTVSSPKTTPPSVYPLAPAAASTAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIELTQSPAIMSASPGEKVTMTCSASSSLRYMHWYQQKSGTSPKRWIYDTYNLASGVPVRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.256105 | 23.204784 | 216 | 213 | 212 | 213 | 216 | 213 | 96 | heavy chain | light chain | mus musculus | mus musculus | A | protein | vp1 | echovirus e30 | 41 | 17 | 0.81 | HL | train |
7jjo_N | 7jjo | structural basis of the activation of heterotrimeric gs-protein by isoproterenol-bound beta1-adrenergic receptor | yes | signaling protein | 2020-07-27 | 2020-09-02 | electron microscopy | 2.6 | N.A. | N.A. | 32818430 | 10.1016/j.molcel.2020.08.001 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.883424 | 0 | 138 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short | bos taurus;bos taurus | 28;51 | 11;13 | 0.73;0.52 | H_only | train |
7jkb_A | 7jkb | 2xvh fab | no | immune system | 2020-07-28 | 2020-11-25 | x-ray diffraction | 2.55 | 0.292 | 0.254 | 33172091 | 10.3390/antib9040062 | 0 | auth_asym_id | FabH | IGHV3 | N.A. | A | N.A. | EVQLLESGGGLVQPGGSLRLSCAASGFRISDEDMGWVRQAPGKGLEWVSSIYGPSGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASALEPLSEPLGFWGQGTLVTVSSGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | N.A. | EVQLLESGGGLVQPGGSLRLSCAASGFRISDEDMGWVRQAPGKGLEWVSSIYGPSGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASALEPLSEPLGFWGQGTLVTVSSGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | N.A. | 20.959606 | 0 | 226 | 0 | 223 | 0 | 223 | 0 | 0 | anti-lysozyme | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7jkb_B | 7jkb | 2xvh fab | no | immune system | 2020-07-28 | 2020-11-25 | x-ray diffraction | 2.55 | 0.292 | 0.254 | 33172091 | 10.3390/antib9040062 | 0 | auth_asym_id | FabH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLIKPGGSLRLSCAASGFTVSYESMGWVRQAPGKGLEWVSAISSSGGSTYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCVTPERQCKQSTCYARPRYWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTHHHHHH | N.A. | QVQLVESGGGLIKPGGSLRLSCAASGFTVSYESMGWVRQAPGKGLEWVSAISSSGGSTYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCVTPERQCKQSTCYARPRYWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | N.A. | 24.116024 | 0 | 239 | 0 | 226 | 0 | 226 | 0 | 0 | anti-her2 | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7jkt_H_L | 7jkt | crystal structure of vaccine-elicited broadly neutralizing vrc01-class antibody 2413a in complex with hiv-1 gp120 core | no | viral protein/immune system | 2020-07-28 | 2021-06-09 | x-ray diffraction | 2.75 | 0.252 | 0.197 | 33453152 | 10.1016/j.immuni.2020.12.014 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | QVQLVQSGPEVRAPGASVTVSCKTSGYSFTDFFIHWVRQAPGQGLEWMGWLNPIFGAVNYAHKYQGRITLTRDTSMKTAYMQLTNLRSDDTAVFYCVRKRVYDEYDWDWAYWGQGTLVTVSAASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCDKGLEVLFQ | EIVLTQSPGILSLSPGERATLSCRTSQDVGSNSLAWYQEKPGQAPRLLVYGASNRATGVPDRFSGGGSGTDFTLTISRLEPEDFAVYYCQQYEYFGRGTKVQVDIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLVQSGPEVRAPGASVTVSCKTSGYSFTDFFIHWVRQAPGQGLEWMGWLNPIFGAVNYAHKYQGRITLTRDTSMKTAYMQLTNLRSDDTAVFYCVRKRVYDEYDWDWAYWGQGTLVTVSAASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCD | EIVLTQSPGILSLSPGERATLSCRTSQDVGSNSLAWYQEKPGQAPRLLVYGASNRATGVPDRFSGGGSGTDFTLTISRLEPEDFAVYYCQQYEYFGRGTKVQVDIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | 24.350471 | 23.244286 | 233 | 213 | 225 | 212 | 225 | 212 | 92 | heavy chain of antibody 2413a | light chain of antibody 2413a | mus musculus | mus musculus | G | protein | hiv-1 gp120 core from strain d45-01dg5 | human immunodeficiency virus 1 | 55 | 13 | 0.54 | HL | train |
6zwk_A | 6zwk | crystal structure of the phosphorylated c-terminal tail of histone h2ax in complex with a specific nanobody (c6 gammaxbody) | yes | immune system | 2020-07-28 | 2021-07-21 | x-ray diffraction | 1.55 | 0.184 | 0.149 | 34282773 | 10.3390/cancers13133317 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSSAAATSMFQDPQERPRASAHHHHHH | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSSA | N.A. | 13.869861 | 0 | 150 | 0 | 127 | 0 | 127 | 0 | 0 | gammaxbody | N.A. | vicugna pacos | N.A. | G | peptide | histone h2ax | homo sapiens | 12 | 6 | 0.86 | H_only | train |
6zwk_B | 6zwk | crystal structure of the phosphorylated c-terminal tail of histone h2ax in complex with a specific nanobody (c6 gammaxbody) | yes | immune system | 2020-07-28 | 2021-07-21 | x-ray diffraction | 1.55 | 0.184 | 0.149 | 34282773 | 10.3390/cancers13133317 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSSAAATSMFQDPQERPRASAHHHHHH | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSS | N.A. | 13.766667 | 0 | 150 | 0 | 126 | 0 | 126 | 0 | 0 | gammaxbody | N.A. | vicugna pacos | N.A. | H | peptide | histone h2ax | homo sapiens | 13 | 7 | 0.88 | H_only | train |
6zwk_C | 6zwk | crystal structure of the phosphorylated c-terminal tail of histone h2ax in complex with a specific nanobody (c6 gammaxbody) | yes | immune system | 2020-07-28 | 2021-07-21 | x-ray diffraction | 1.55 | 0.184 | 0.149 | 34282773 | 10.3390/cancers13133317 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSSAAATSMFQDPQERPRASAHHHHHH | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSSAA | N.A. | 13.98954 | 0 | 150 | 0 | 128 | 0 | 128 | 0 | 0 | gammaxbody | N.A. | vicugna pacos | N.A. | I | peptide | histone h2ax | homo sapiens | 13 | 7 | 0.88 | H_only | train |
6zwk_D | 6zwk | crystal structure of the phosphorylated c-terminal tail of histone h2ax in complex with a specific nanobody (c6 gammaxbody) | yes | immune system | 2020-07-28 | 2021-07-21 | x-ray diffraction | 1.55 | 0.184 | 0.149 | 34282773 | 10.3390/cancers13133317 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSSAAATSMFQDPQERPRASAHHHHHH | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSSA | N.A. | 13.842044 | 0 | 150 | 0 | 127 | 0 | 127 | 0 | 0 | gammaxbody | N.A. | vicugna pacos | N.A. | J | peptide | histone h2ax | homo sapiens | 14 | 8 | 0.89 | H_only | train |
6zwk_E | 6zwk | crystal structure of the phosphorylated c-terminal tail of histone h2ax in complex with a specific nanobody (c6 gammaxbody) | yes | immune system | 2020-07-28 | 2021-07-21 | x-ray diffraction | 1.55 | 0.184 | 0.149 | 34282773 | 10.3390/cancers13133317 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSSAAATSMFQDPQERPRASAHHHHHH | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSSAA | N.A. | 13.978349 | 0 | 150 | 0 | 128 | 0 | 128 | 0 | 0 | gammaxbody | N.A. | vicugna pacos | N.A. | K | peptide | histone h2ax | homo sapiens | 12 | 6 | 0.86 | H_only | train |
6zwk_F | 6zwk | crystal structure of the phosphorylated c-terminal tail of histone h2ax in complex with a specific nanobody (c6 gammaxbody) | yes | immune system | 2020-07-28 | 2021-07-21 | x-ray diffraction | 1.55 | 0.184 | 0.149 | 34282773 | 10.3390/cancers13133317 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSSAAATSMFQDPQERPRASAHHHHHH | N.A. | TEVQLVESGGGLVQAGDSLRLSCAASGLTFSRYAMGWFRQAPGNEREFVAVITASGRTTLYADSVKGRFTISRDNAKNTVALQMQSLKPEDTAVYYCAADYGTSRYTRRQSEYEYWGQGTQVTVSSAAA | N.A. | 14.10917 | 0 | 150 | 0 | 129 | 0 | 129 | 0 | 0 | gammaxbody | N.A. | vicugna pacos | N.A. | L | peptide | histone h2ax | homo sapiens | 12 | 6 | 0.86 | H_only | train |
7jkm_H_L | 7jkm | regn1 human fab in complex with anti-kappa vhh domain | no | immune system | 2020-07-28 | 2021-08-04 | x-ray diffraction | 1.78 | 0.21 | 0.182 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVHLVESGGGLVQPGRSLRLSCAASGFTFDDYTMHWVRQAPGKGLEWVSDISWNSGSIGYADSVKGRFTVSRDNAKNSLYLQMNSLRGEDTAIYYCAKDMSGYGHYGKYGMDVWGQGTTVTVSSAATKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPCVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPA | DIQMTQSPILLSASVGDRVTITCRASQSIRSYLNWYQQRTNGSPRLLIYAASSLQSGVPSRFSGSGSGTDFTLTINSLQPDDEADYYCQQTYSNPPITFGAGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVHLVESGGGLVQPGRSLRLSCAASGFTFDDYTMHWVRQAPGKGLEWVSDISWNSGSIGYADSVKGRFTVSRDNAKNSLYLQMNSLRGEDTAIYYCAKDMSGYGHYGKYGMDVWGQGTTVTVSSAATKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPCVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPA | DIQMTQSPILLSASVGDRVTITCRASQSIRSYLNWYQQRTNGSPRLLIYAASSLQSGVPSRFSGSGSGTDFTLTINSLQPDDEADYYCQQTYSNPPITFGAGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.797798 | 22.740448 | 225 | 215 | 219 | 214 | 225 | 214 | 91 | regn1 antibody heavy chain | regn1 antibody light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7jkm_K | 7jkm | regn1 human fab in complex with anti-kappa vhh domain | no | immune system | 2020-07-28 | 2021-08-04 | x-ray diffraction | 1.78 | 0.21 | 0.182 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSA | N.A. | EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.680876 | 0 | 121 | 0 | 120 | 0 | 120 | 0 | 0 | anti-kappa vhh domain nanobody | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7cn2_M_m | 7cn2 | subparticle refinement of human papillomavirus type 16 pesudovirus in complex with h16.001 fab | no | immune system/viral protein | 2020-07-29 | 2020-09-02 | electron microscopy | 3.43 | N.A. | N.A. | 33042588 | 10.1038/s41541-020-00236-w | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | M | m | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | 14.185636 | 13.901476 | 120 | 110 | 120 | 110 | 120 | 110 | 46 | the heavy chain variable region of h16.001 fab fragment | the light chain variable region of h16.001 fab fragment | oryctolagus cuniculus | oryctolagus cuniculus | A | protein | major capsid protein l1 | human papillomavirus type 16 | 39 | 15 | 0.83 | HL | train |
7cn2_K_k | 7cn2 | subparticle refinement of human papillomavirus type 16 pesudovirus in complex with h16.001 fab | no | immune system/viral protein | 2020-07-29 | 2020-09-02 | electron microscopy | 3.43 | N.A. | N.A. | 33042588 | 10.1038/s41541-020-00236-w | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | K | k | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | 14.165953 | 13.911791 | 120 | 110 | 120 | 110 | 120 | 110 | 49 | the heavy chain variable region of h16.001 fab fragment | the light chain variable region of h16.001 fab fragment | oryctolagus cuniculus | oryctolagus cuniculus | B;C | protein;protein | major capsid protein l1;major capsid protein l1 | human papillomavirus type 16;human papillomavirus type 16 | 19;41 | 13;16 | 1.0;0.84 | HL | train |
7cn2_J_j | 7cn2 | subparticle refinement of human papillomavirus type 16 pesudovirus in complex with h16.001 fab | no | immune system/viral protein | 2020-07-29 | 2020-09-02 | electron microscopy | 3.43 | N.A. | N.A. | 33042588 | 10.1038/s41541-020-00236-w | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | J | j | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | 14.183993 | 13.904453 | 120 | 110 | 120 | 110 | 120 | 110 | 47 | the heavy chain variable region of h16.001 fab fragment | the light chain variable region of h16.001 fab fragment | oryctolagus cuniculus | oryctolagus cuniculus | B;F | protein;protein | major capsid protein l1;major capsid protein l1 | human papillomavirus type 16;human papillomavirus type 16 | 41;17 | 19;12 | 0.9;1.0 | HL | train |
7cn2_H_L | 7cn2 | subparticle refinement of human papillomavirus type 16 pesudovirus in complex with h16.001 fab | no | immune system/viral protein | 2020-07-29 | 2020-09-02 | electron microscopy | 3.43 | N.A. | N.A. | 33042588 | 10.1038/s41541-020-00236-w | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | 14.187233 | 13.905275 | 120 | 110 | 120 | 110 | 120 | 110 | 48 | the heavy chain variable region of h16.001 fab fragment | the light chain variable region of h16.001 fab fragment | oryctolagus cuniculus | oryctolagus cuniculus | C;D | protein;protein | major capsid protein l1;major capsid protein l1 | human papillomavirus type 16;human papillomavirus type 16 | 18;43 | 13;19 | 1.0;0.95 | HL | train |
7cn2_G_g | 7cn2 | subparticle refinement of human papillomavirus type 16 pesudovirus in complex with h16.001 fab | no | immune system/viral protein | 2020-07-29 | 2020-09-02 | electron microscopy | 3.43 | N.A. | N.A. | 33042588 | 10.1038/s41541-020-00236-w | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | G | g | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | 14.188543 | 13.911726 | 120 | 110 | 120 | 110 | 120 | 110 | 47 | the heavy chain variable region of h16.001 fab fragment | the light chain variable region of h16.001 fab fragment | oryctolagus cuniculus | oryctolagus cuniculus | D;E | protein;protein | major capsid protein l1;major capsid protein l1 | human papillomavirus type 16;human papillomavirus type 16 | 17;39 | 10;19 | 1.0;0.95 | HL | train |
7cn2_I_i | 7cn2 | subparticle refinement of human papillomavirus type 16 pesudovirus in complex with h16.001 fab | no | immune system/viral protein | 2020-07-29 | 2020-09-02 | electron microscopy | 3.43 | N.A. | N.A. | 33042588 | 10.1038/s41541-020-00236-w | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | I | i | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | QSVKESEGRLVTPGTPLTLTCTASGFTMSRYHMTWVRQAPGKGLEWIGIIYARNSDTYYANWAKGRFTISKTSTTVDLKITSPTIEDTATYFCARVDSDSSGAFDRLDLWGQGTLVTVSS | DPMLTQTAASVEVAVGGTVTIKCQASQSIGGYLSWYQQKPGQRPKLLIYRASTLASGVPSRFKGSGSGTEYTLTFSGVECADAAAYYCQQGYTSSDINNAFGGGTEVVVK | 14.185683 | 13.918016 | 120 | 110 | 120 | 110 | 120 | 110 | 49 | the heavy chain variable region of h16.001 fab fragment | the light chain variable region of h16.001 fab fragment | oryctolagus cuniculus | oryctolagus cuniculus | E;F | protein;protein | major capsid protein l1;major capsid protein l1 | human papillomavirus type 16;human papillomavirus type 16 | 19;46 | 12;19 | 1.0;0.86 | HL | train |
7cmu_E | 7cmu | dopamine receptor d3r-gi-pramipexole complex | yes | membrane protein | 2020-07-29 | 2021-03-10 | electron microscopy | 3 | N.A. | N.A. | 33548201 | 10.1016/j.molcel.2021.01.003 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.46556 | 0 | 248 | 0 | 231 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 26;31 | 10;17 | 0.77;0.89 | H_only | train |
7jlk_A_B | 7jlk | crystal structure of glvrc01 fab in complex with anti-idiotype iv1 scfv | no | immune system | 2020-07-29 | 2021-03-31 | x-ray diffraction | 1.99 | 0.235 | 0.179 | 33951425 | 10.1016/j.celrep.2021.109084 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | A | B | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGKNSDYNWDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQYEFFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARGKNSDYNWDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQYEFFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.012157 | 22.734436 | 233 | 210 | 226 | 210 | 227 | 210 | 102 | glvrc01 heavy chain | glvrc01 light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7jlk_H_L | 7jlk | crystal structure of glvrc01 fab in complex with anti-idiotype iv1 scfv | no | immune system | 2020-07-29 | 2021-03-31 | x-ray diffraction | 1.99 | 0.235 | 0.179 | 33951425 | 10.1016/j.celrep.2021.109084 | 0 | auth_asym_id | VH:VL | IGHV7 | IGKV1 | H | L | QIQLVQSGPELKKPGETVKISCKASGYTFTNYEINWVQQAPGKGLKLMGWINTYTGEPTSADDFKGRFAFSLETSASTAYLQINNLKNEDAATYFCARGDYYGSSSAWLPYWGQGTLVTVSAGSGSGHHHHHH | DIVMTQSQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKALIFLASNRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCLQHWNYPLTFGGGTKLEIKGGGGSGGGGSGGGGS | QIQLVQSGPELKKPGETVKISCKASGYTFTNYEINWVQQAPGKGLKLMGWINTYTGEPTSADDFKGRFAFSLETSASTAYLQINNLKNEDAATYFCARGDYYGSSSAWLPYWGQGTLVTVSA | DIVMTQSQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKALIFLASNRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCLQHWNYPLTFGGGTKLEIKGGGGS | 14.084319 | 13.39153 | 133 | 122 | 122 | 112 | 122 | 112 | 44 | iv1 heavy chain | iv1 light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7jmp_H_L | 7jmp | crystal structure of sars-cov-2 receptor binding domain in complex with neutralizing antibody cova2-39 | no | viral protein/immune system | 2020-08-02 | 2020-08-26 | x-ray diffraction | 1.71 | 0.209 | 0.177 | 33027617 | 10.1016/j.celrep.2020.108274 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | H | L | QVQLVETGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYTGGTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARAHVDTAMVESGAFDIWGQGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVTKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVETGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYTGGTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARAHVDTAMVESGAFDIWGQGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | ALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVTKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 24.11313 | 21.043406 | 232 | 216 | 218 | 211 | 223 | 211 | 95 | cova2-39 heavy chain | cova2-39 light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 41 | 21 | 0.91 | HL | train |
7jmx_H_L | 7jmx | crystal structure of a sars-cov-2 cross-neutralizing antibody cova1-16 fab | no | immune system | 2020-08-03 | 2020-10-14 | x-ray diffraction | 2.53 | 0.244 | 0.211 | 33242394 | 10.1016/j.immuni.2020.10.023 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINSSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARPPRNYYDRSGYYQRAEYFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH | DIQLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQRPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNPPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINSSGGSTSYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARPPRNYYDRSGYYQRAEYFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIQLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQRPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNPPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.83079 | 23.13961 | 238 | 214 | 222 | 208 | 230 | 211 | 106 | cova1-16 heavy chain | cova1-16 light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7jn5_H_L | 7jn5 | crystal structure of sars-cov receptor binding domain in complex with human antibody cr3022 | no | viral protein/immune system | 2020-08-03 | 2020-10-28 | x-ray diffraction | 2.71 | 0.272 | 0.211 | 33275640 | 10.1371/journal.ppat.1009089 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | QMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | QMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.526777 | 24.379353 | 221 | 221 | 221 | 220 | 221 | 220 | 110 | cr3022 heavy chain | cr3022 light chain | homo sapiens | homo sapiens | F | protein | spike glycoprotein | human sars coronavirus | 54 | 23 | 0.82 | HL | train |
7coe_H_L | 7coe | crystal structure of receptor binding domain of mers-cov and knih90-f1 fab complex | no | immune system | 2020-08-04 | 2021-08-04 | x-ray diffraction | 2.05 | 0.223 | 0.176 | 35075213 | 10.1038/s41598-022-05318-4 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | QVQLVQSGAEVKRPGSSVKVSCKTSGGTFNNNAINWVRQAPGQGLEWMGGIIPFFGIAKYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDLPRESSYGSGSYYTHYYAMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT | EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKRPGSSVKVSCKTSGGTFNNNAINWVRQAPGQGLEWMGGIIPFFGIAKYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDLPRESSYGSGSYYTHYYAMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.702612 | 22.69669 | 237 | 215 | 223 | 214 | 232 | 214 | 93 | heavy chain | light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | middle east respiratory syndrome-related coronavirus | 42 | 17 | 0.85 | HL | train |
7coe_B_C | 7coe | crystal structure of receptor binding domain of mers-cov and knih90-f1 fab complex | no | immune system | 2020-08-04 | 2021-08-04 | x-ray diffraction | 2.05 | 0.223 | 0.176 | 35075213 | 10.1038/s41598-022-05318-4 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | B | C | QVQLVQSGAEVKRPGSSVKVSCKTSGGTFNNNAINWVRQAPGQGLEWMGGIIPFFGIAKYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDLPRESSYGSGSYYTHYYAMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT | EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKRPGSSVKVSCKTSGGTFNNNAINWVRQAPGQGLEWMGGIIPFFGIAKYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDLPRESSYGSGSYYTHYYAMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIYDASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 23.294912 | 22.481491 | 237 | 215 | 225 | 213 | 232 | 213 | 106 | heavy chain | light chain | homo sapiens | homo sapiens | D | protein | spike glycoprotein | middle east respiratory syndrome-related coronavirus | 39 | 17 | 0.85 | HL | train |
7joo_H_L | 7joo | crystal structure of icos in complex with antibody stim003 and anti-kappa vhh domain | no | immune system | 2020-08-06 | 2020-10-14 | x-ray diffraction | 2.4 | 0.297 | 0.241 | 33033255 | 10.1038/s41467-020-18828-4 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGVVRPGGSLRLSCVASGVTFDDYGMSWVRQAPGKGLEWVSGINWNGGDTDYSDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCARDFYGSGSYYHVPFDYWGQGILVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSRSYLAWYQQKRGQAPRLLIYGASSRATGIPDRFSGDGSGTDFTLSISRLEPEDFAVYYCHQYDMSPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGGGVVRPGGSLRLSCVASGVTFDDYGMSWVRQAPGKGLEWVSGINWNGGDTDYSDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCARDFYGSGSYYHVPFDYWGQGILVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPGTLSLSPGERATLSCRASQSVSRSYLAWYQQKRGQAPRLLIYGASSRATGIPDRFSGDGSGTDFTLSISRLEPEDFAVYYCHQYDMSPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.62241 | 22.27772 | 227 | 215 | 218 | 213 | 224 | 213 | 98 | stim003 fab heavy chain | stim003 fab light chain | homo sapiens | homo sapiens | C | protein | inducible t-cell costimulator | homo sapiens | 41 | 20 | 0.83 | HL | train |
7jo8_A | 7jo8 | crystal structure of a chimeric antigen receptor (car) scfv domain rearrangement forming a vl-vl dimer | no | immune system | 2020-08-06 | 2021-02-10 | x-ray diffraction | 1.4 | 0.171 | 0.155 | N.A. | 10.3390/cryst13040710 | 0 | auth_asym_id | VL | N.A. | IGKV3 | N.A. | A | N.A. | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSRFTFGPGTKVDIKGS | N.A. | IVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSRFTFGPGTKVDIK | 0 | 13.021164 | 0 | 110 | 0 | 107 | 0 | 107 | 0 | N.A. | 47g4-cd828z | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | L_only | train |
7jo8_B | 7jo8 | crystal structure of a chimeric antigen receptor (car) scfv domain rearrangement forming a vl-vl dimer | no | immune system | 2020-08-06 | 2021-02-10 | x-ray diffraction | 1.4 | 0.171 | 0.155 | N.A. | 10.3390/cryst13040710 | 0 | auth_asym_id | VL | N.A. | IGKV3 | N.A. | B | N.A. | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSRFTFGPGTKVDIKGS | N.A. | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSRFTFGPGTKVDIKGS | 0 | 13.285926 | 0 | 110 | 0 | 110 | 0 | 110 | 0 | N.A. | 47g4-cd828z | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | L_only | train |
7cqc_H_L | 7cqc | the nz-1 fab complexed with the pdz tandem fragment of a. aeolicus s2p homolog with the pa14 tag inserted between the residues 181 and 184 | no | hydrolase/immune system | 2020-08-10 | 2021-05-19 | x-ray diffraction | 2.5 | 0.258 | 0.23 | 33950020 | 10.1107/S2059798321002527 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV6 | H | L | EVQLVESGGGLVQPGRSLKLSCAASGFTFSNYGMAWVRQTPTKGLEWIASISAGGDKTYYGDSVKGRFSISRDNAKTTHYLQMDSLRSEDTATYYCAKTSRVYFDYWGQGVMVTVSSAETTAPSVYPLAPGTALKSNSMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSGLYTLTSSVTVPSSTWSSQAVTCNVAHPASSTKVDKKIVPREC | QFVLTQPNSVSTNLGSTVKLSCKRSTGNIGSNYVNWYQQHEGRSPTTMIYRDDKRPDGVPDRFSGSIDRSSNSALLTINNVQTEDEADYFCHSYSSGIVFGGGTKLTVLGQPKSTPTLTVFPPSTEELQGNKATLVCLISDFYPSDVEVAWKANGAPISQGVDTANPTKQGNKYIASSFLRLTAEQWRSRNSFTCQVTHEGNTVEKSLSPAECV | EVQLVESGGGLVQPGRSLKLSCAASGFTFSNYGMAWVRQTPTKGLEWIASISAGGDKTYYGDSVKGRFSISRDNAKTTHYLQMDSLRSEDTATYYCAKTSRVYFDYWGQGVMVTVSSAETTAPSVYPLAPGTALKSNSMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSGLYTLTSSVTVPSSTWSSQAVTCNVAHPASSTKVDKKIVPREC | FVLTQPNSVSTNLGSTVKLSCKRSTGNIGSNYVNWYQQHEGRSPTTMIYRDDKRPDGVPDRFSGSIDRSSNSALLTINNVQTEDEADYFCHSYSSGIVFGGGTKLTVLGQPKSTPTLTVFPPSTEELQGNKATLVCLISDFYPSDVEVAWKANGAPISQGVDTANPTKQGNKYIASSFLRLTAEQWRSRNSFTCQVTHEGNTVEKSLSPAECV | 20.507595 | 23.987103 | 219 | 214 | 212 | 213 | 219 | 213 | 92 | heavy chain of antigen binding fragment, fab of nz-1 | light chain of antigen binding fragment, fab of nz-1 | rattus norvegicus | rattus norvegicus | A | protein | putative zinc metalloprotease aq_1964,pa14 from podoplanin,putative zinc metalloprotease aq_1964 | aquifex aeolicus vf5 | 52 | 21 | 0.66 | HL | train |
7a0v_B | 7a0v | crystal structure of the 5-phosphatase domain of synaptojanin1 in complex with a nanobody | no | hydrolase | 2020-08-11 | 2020-12-30 | x-ray diffraction | 2.3 | 0.252 | 0.196 | 33349335 | 10.7554/eLife.64922 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVTVSSH | N.A. | 13.83686 | 0 | 132 | 0 | 123 | 0 | 123 | 0 | 0 | nanobody 13015 | N.A. | lama glama | N.A. | A | protein | synaptojanin-1 | homo sapiens | 32 | 13 | 1 | H_only | train |
7a0v_D | 7a0v | crystal structure of the 5-phosphatase domain of synaptojanin1 in complex with a nanobody | no | hydrolase | 2020-08-11 | 2020-12-30 | x-ray diffraction | 2.3 | 0.252 | 0.196 | 33349335 | 10.7554/eLife.64922 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVTVSSHHH | N.A. | 14.134789 | 0 | 132 | 0 | 125 | 0 | 125 | 0 | 0 | nanobody 13015 | N.A. | lama glama | N.A. | C | protein | synaptojanin-1 | homo sapiens | 28 | 10 | 0.91 | H_only | train |
7a0v_F | 7a0v | crystal structure of the 5-phosphatase domain of synaptojanin1 in complex with a nanobody | no | hydrolase | 2020-08-11 | 2020-12-30 | x-ray diffraction | 2.3 | 0.252 | 0.196 | 33349335 | 10.7554/eLife.64922 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVTVSSHH | N.A. | 14.005776 | 0 | 132 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody 13015 | N.A. | lama glama | N.A. | E | protein | synaptojanin-1 | homo sapiens | 28 | 11 | 1 | H_only | train |
7jr7_C_D | 7jr7 | cryo-em structure of abcg5/g8 in complex with fab 2e10 and 11f4 | no | translocase/immune system | 2020-08-11 | 2021-04-07 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | 10.1038/s42003-021-02039-8 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | C | D | DVQLQESGPGLVKPSQSLSLTCTITGYSITSDYAWNWIRQFPGNKLEWMGYISYSGTTYYNPSLKSRFSITRDTSRNQFFLQFNSVTTEDTGTYFCARMITTVYYFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD | QIVLTQSPTIMSASLGERVTMTCTASSSASSSYLHWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISNMEAEDAATYYCHQHHRSPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTATLTKDEYERHNSYTCEATHKTSTSPIVKSFNRA | DVQLQESGPGLVKPSQSLSLTCTITGYSITSDYAWNWIRQFPGNKLEWMGYISYSGTTYYNPSLKSRFSITRDTSRNQFFLQFNSVTTEDTGTYFCARMITTVYYFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD | QIVLTQSPTIMSASLGERVTMTCTASSSASSSYLHWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISNMEAEDAATYYCHQHHRSPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTATLTKDEYERHNSYTCEATHKTSTSPIVKSFNRA | 21.765768 | 23.344975 | 220 | 213 | 210 | 213 | 220 | 213 | 95 | fab 11f4 heavy chain | fab 11f4 light chain | homo sapiens | homo sapiens | B | protein | atp-binding cassette sub-family g member 8 | homo sapiens | 47 | 20 | 0.77 | HL | train |
7jr7_E_F | 7jr7 | cryo-em structure of abcg5/g8 in complex with fab 2e10 and 11f4 | no | translocase/immune system | 2020-08-11 | 2021-04-07 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | 10.1038/s42003-021-02039-8 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | E | F | QVHLQQSGAELVRPGTSVKMSCKAAGYTFTYWWIGWLKQRPGHGLEWIGDFFPVSGHTNFNEKFRDKATLTADTSSSTAYMQLNSLTSEDSAIYYCARKQDSSGPLYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD | DIQMTQSSSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISAATSLETGVPSRFSGSGSGKDYTLSIISLQTEDVATYYCQQYWSTPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSTTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRA | QVHLQQSGAELVRPGTSVKMSCKAAGYTFTYWWIGWLKQRPGHGLEWIGDFFPVSGHTNFNEKFRDKATLTADTSSSTAYMQLNSLTSEDSAIYYCARKQDSSGPLYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD | DIQMTQSSSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISAATSLETGVPSRFSGSGSGKDYTLSIISLQTEDVATYYCQQYWSTPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSTTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRA | 23.21144 | 23.147661 | 223 | 212 | 218 | 212 | 223 | 212 | 93 | fab 2e10 heavy chain | fab 2e10 light chain | homo sapiens | homo sapiens | B | protein | atp-binding cassette sub-family g member 8 | homo sapiens | 40 | 17 | 0.85 | HL | train |
7a0w_C_D | 7a0w | structure of dimeric sodium proton antiporter nhaa, at ph 8.5, crystallized with chimeric fab antibodies | no | membrane protein | 2020-08-11 | 2022-02-23 | x-ray diffraction | 2.04 | 0.235 | 0.198 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | C | D | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTSGQAGQHHHHHHGAYPYDVPDYAS | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNRGEC | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNR | 20.46335 | 22.261068 | 252 | 210 | 213 | 207 | 223 | 207 | 102 | chimeric antibody fab-f6, heavy chain,chimeric antibody fab-f6, heavy chain | chimeric antibody fab-f6, light chain,chimeric antibody fab-f6, light chain | gallus gallus | gallus gallus | A | protein | na(+)/h(+) antiporter nhaa | salmonella enterica subsp. enterica serovar typhimurium str. lt2 | 51 | 20 | 0.77 | HL | train |
7a0w_E_F | 7a0w | structure of dimeric sodium proton antiporter nhaa, at ph 8.5, crystallized with chimeric fab antibodies | no | membrane protein | 2020-08-11 | 2022-02-23 | x-ray diffraction | 2.04 | 0.235 | 0.198 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | E | F | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTSGQAGQHHHHHHGAYPYDVPDYAS | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNRGEC | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNRGE | 22.687998 | 22.225237 | 252 | 210 | 223 | 209 | 223 | 209 | 116 | chimeric antibody fab-f6, heavy chain,chimeric antibody fab-f6, heavy chain | chimeric antibody fab-f6, light chain,chimeric antibody fab-f6, light chain | gallus gallus | gallus gallus | B | protein | na(+)/h(+) antiporter nhaa | salmonella enterica subsp. enterica serovar typhimurium str. lt2 | 52 | 23 | 0.79 | HL | train |
7a0x_C_D | 7a0x | structure of dimeric sodium proton antiporter nhaa, at ph 6.0, crystallized with chimeric fab antibodies | no | membrane protein | 2020-08-11 | 2022-02-23 | x-ray diffraction | 2.37 | 0.241 | 0.205 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | C | D | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTSGQAGQHHHHHHGAYPYDVPDYAS | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNRGEC | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNR | 20.358524 | 22.391134 | 252 | 210 | 210 | 207 | 220 | 207 | 95 | chimeric antibody fab-f6, heavy chain,chimeric antibody fab-f6, heavy chain,chimeric antibody fab-f6, heavy chain,chimeric antibody fab-f6, heavy chain | chimeric antibody fab-f6, light chain,chimeric antibody fab-f6, light chain,chimeric antibody fab-f6, light chain,chimeric antibody fab-f6, light chain | gallus gallus | gallus gallus | A | protein | na(+)/h(+) antiporter nhaa | salmonella typhimurium (strain lt2 / sgsc1412 / atcc 700720) | 54 | 23 | 0.79 | HL | train |
7a0x_E_F | 7a0x | structure of dimeric sodium proton antiporter nhaa, at ph 6.0, crystallized with chimeric fab antibodies | no | membrane protein | 2020-08-11 | 2022-02-23 | x-ray diffraction | 2.37 | 0.241 | 0.205 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | E | F | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTSGQAGQHHHHHHGAYPYDVPDYAS | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNRGEC | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNRGE | 22.70142 | 22.196415 | 252 | 210 | 223 | 209 | 223 | 209 | 112 | chimeric antibody fab-f6, heavy chain,chimeric antibody fab-f6, heavy chain,chimeric antibody fab-f6, heavy chain,chimeric antibody fab-f6, heavy chain | chimeric antibody fab-f6, light chain,chimeric antibody fab-f6, light chain,chimeric antibody fab-f6, light chain,chimeric antibody fab-f6, light chain | gallus gallus | gallus gallus | B | protein | na(+)/h(+) antiporter nhaa | salmonella typhimurium (strain lt2 / sgsc1412 / atcc 700720) | 50 | 21 | 0.78 | HL | train |
7a0y_C_D | 7a0y | structure of dimeric sodium proton antiporter nhaa k300r variant, at ph 8.2, crystallized with chimeric fab antibodies | yes | membrane protein | 2020-08-11 | 2022-02-23 | x-ray diffraction | 2.45 | 0.241 | 0.203 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | C | D | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTSGQAGQHHHHHHGAYPYDVPDYAS | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNRGEC | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNR | 20.385086 | 22.237198 | 252 | 210 | 213 | 207 | 223 | 207 | 96 | chimeric antibody fab-f6, heavy chain,chimeric antibody fab-f6, heavy chain | chimeric antibody fab-f6, light chain,chimeric antibody fab-f6, light chain | gallus gallus | gallus gallus | A | protein | na(+)/h(+) antiporter nhaa | salmonella enterica subsp. enterica serovar typhimurium str. lt2 | 50 | 21 | 0.78 | HL | train |
7a0y_E_F | 7a0y | structure of dimeric sodium proton antiporter nhaa k300r variant, at ph 8.2, crystallized with chimeric fab antibodies | yes | membrane protein | 2020-08-11 | 2022-02-23 | x-ray diffraction | 2.45 | 0.241 | 0.203 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | E | F | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTSGQAGQHHHHHHGAYPYDVPDYAS | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNRGEC | AVTLDESGGGLQTPGGGLSLVCKASGFTFSDYGMGWVRQAPDKGLEWVAGIYTTGSGTRYGAAVKGRATISRDNGQSTVRLQLNNLRAEDTGTYYCAKSTGRDYYGGGIDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ALTQPSSVSANPGGTVKITCSGGTYSYGWFQQKSPGSAPVTVIYWNDKRPSNIPSRFSGSKSGSTHTLTITGVRAEDEAVYFCGSADSSGTAIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSLPVTKSFNRGE | 22.627338 | 22.135893 | 252 | 210 | 223 | 209 | 223 | 209 | 119 | chimeric antibody fab-f6, heavy chain,chimeric antibody fab-f6, heavy chain | chimeric antibody fab-f6, light chain,chimeric antibody fab-f6, light chain | gallus gallus | gallus gallus | B | protein | na(+)/h(+) antiporter nhaa | salmonella enterica subsp. enterica serovar typhimurium str. lt2 | 54 | 23 | 0.79 | HL | train |
7a17_B | 7a17 | crystal structure of the 5-phosphatase domain of synaptojanin1 bound to its substrate dic8-pi(3,4,5)p3 in complex with a nanobody | no | hydrolase | 2020-08-12 | 2020-12-30 | x-ray diffraction | 2.73 | 0.257 | 0.196 | 33349335 | 10.7554/eLife.64922 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVT | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVT | N.A. | 13.42508 | 0 | 119 | 0 | 119 | 0 | 119 | 0 | 0 | nanobody 13015 | N.A. | lama glama | N.A. | A | protein | isoform 2 of synaptojanin-1 | homo sapiens | 31 | 14 | 1 | H_only | train |
7a17_D | 7a17 | crystal structure of the 5-phosphatase domain of synaptojanin1 bound to its substrate dic8-pi(3,4,5)p3 in complex with a nanobody | no | hydrolase | 2020-08-12 | 2020-12-30 | x-ray diffraction | 2.73 | 0.257 | 0.196 | 33349335 | 10.7554/eLife.64922 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVTVSSH | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVTVSSH | N.A. | 13.824237 | 0 | 123 | 0 | 123 | 0 | 123 | 0 | 0 | nanobody 13015 | N.A. | lama glama | N.A. | C | protein | isoform 2 of synaptojanin-1 | homo sapiens | 28 | 10 | 1 | H_only | train |
7a17_F | 7a17 | crystal structure of the 5-phosphatase domain of synaptojanin1 bound to its substrate dic8-pi(3,4,5)p3 in complex with a nanobody | no | hydrolase | 2020-08-12 | 2020-12-30 | x-ray diffraction | 2.73 | 0.257 | 0.196 | 33349335 | 10.7554/eLife.64922 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVTVSSHHH | N.A. | QVQLVESGGGFAQAGGSLRLSCAASGSTFRFRAMGWFRQAPGKEREFVAGISWSGSTKYTDSVKGRFTISRDNAKNTVHLQMNNLTPEDTAVYYCAQSRAIEADDSRGYDYWGQGTQVTVSSHHH | N.A. | 14.11947 | 0 | 125 | 0 | 125 | 0 | 125 | 0 | 0 | nanobody 13015 | N.A. | lama glama | N.A. | E | protein | isoform 2 of synaptojanin-1 | homo sapiens | 29 | 10 | 1 | H_only | train |
7cr5_H_L | 7cr5 | complex structure of a human monoclonal antibody with sars-cov-2 nucleocapsid protein ntd | no | viral protein/immune system | 2020-08-12 | 2021-03-24 | x-ray diffraction | 2.08 | 0.222 | 0.191 | 33976229 | 10.1038/s41467-021-23036-9 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV4 | H | L | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYIMHWVRQAPGKGLEWVAVISYDGSNEAYADSVKGRFTISRDNSKNTLYLQMSSLRAEDTGVYYCARETGDYSSSWYDSWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QLVLTQSPSASASLGASVKLTCTLSSGHSNYAIAWHQQQPEKGPRYLMKVNSDGSHTKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGTGIQVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYIMHWVRQAPGKGLEWVAVISYDGSNEAYADSVKGRFTISRDNSKNTLYLQMSSLRAEDTGVYYCARETGDYSSSWYDSWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | QLVLTQSPSASASLGASVKLTCTLSSGHSNYAIAWHQQQPEKGPRYLMKVNSDGSHTKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGTGIQVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 20.638645 | 23.938036 | 226 | 217 | 216 | 213 | 222 | 213 | 89 | monoclonal antibody chain h | monoclonal antibody chain l | homo sapiens | homo sapiens | A | protein | nucleoprotein | severe acute respiratory syndrome coronavirus 2 | 62 | 29 | 0.81 | HL | train |
7a29_D | 7a29 | cryo-em structure of the sars-cov-2 spike protein bound to neutralizing sybodies (sb23) 2-up conformation | no | viral protein | 2020-08-16 | 2020-10-21 | electron microscopy | 2.94 | N.A. | N.A. | 33149112 | 10.1038/s41467-020-19204-y | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | 13.78819 | 0 | 114 | 0 | 114 | 0 | 114 | 0 | 0 | neutralising sybody (sb23) | N.A. | synthetic construct | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 34 | 5 | 0.33 | H_only | train |
7a29_E | 7a29 | cryo-em structure of the sars-cov-2 spike protein bound to neutralizing sybodies (sb23) 2-up conformation | no | viral protein | 2020-08-16 | 2020-10-21 | electron microscopy | 2.94 | N.A. | N.A. | 33149112 | 10.1038/s41467-020-19204-y | 0 | auth_asym_id | VH | IGHV3 | N.A. | E | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | 13.73685 | 0 | 114 | 0 | 114 | 0 | 114 | 0 | 0 | neutralising sybody (sb23) | N.A. | synthetic construct | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 34 | 7 | 0.39 | H_only | train |
7a29_F | 7a29 | cryo-em structure of the sars-cov-2 spike protein bound to neutralizing sybodies (sb23) 2-up conformation | no | viral protein | 2020-08-16 | 2020-10-21 | electron microscopy | 2.94 | N.A. | N.A. | 33149112 | 10.1038/s41467-020-19204-y | 0 | auth_asym_id | VH | IGHV3 | N.A. | F | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | 13.775849 | 0 | 114 | 0 | 114 | 0 | 114 | 0 | 0 | neutralising sybody (sb23) | N.A. | synthetic construct | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 38 | 7 | 0.37 | H_only | train |
7a25_D | 7a25 | cryo-em structure of the sars-cov-2 spike protein bound to neutralizing sybodies (sb23) | no | viral protein | 2020-08-16 | 2020-11-25 | electron microscopy | 3.06 | N.A. | N.A. | 33149112 | 10.1038/s41467-020-19204-y | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | 14.028397 | 0 | 114 | 0 | 114 | 0 | 114 | 0 | 0 | sybody 23 | N.A. | synthetic construct | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 38 | 7 | 0.37 | H_only | train |
7a25_E | 7a25 | cryo-em structure of the sars-cov-2 spike protein bound to neutralizing sybodies (sb23) | no | viral protein | 2020-08-16 | 2020-11-25 | electron microscopy | 3.06 | N.A. | N.A. | 33149112 | 10.1038/s41467-020-19204-y | 0 | auth_asym_id | VH | IGHV3 | N.A. | E | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | 14.028405 | 0 | 114 | 0 | 114 | 0 | 114 | 0 | 0 | sybody 23 | N.A. | synthetic construct | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 33 | 6 | 0.33 | H_only | train |
7a25_F | 7a25 | cryo-em structure of the sars-cov-2 spike protein bound to neutralizing sybodies (sb23) | no | viral protein | 2020-08-16 | 2020-11-25 | electron microscopy | 3.06 | N.A. | N.A. | 33149112 | 10.1038/s41467-020-19204-y | 0 | auth_asym_id | VH | IGHV3 | N.A. | F | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVESENMHWYRQAPGKEREWVAAIYSTGGWTLYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQVGYWYEGQGTQVTVS | N.A. | 14.028399 | 0 | 114 | 0 | 114 | 0 | 114 | 0 | 0 | sybody 23 | N.A. | synthetic construct | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 36 | 5 | 0.29 | H_only | train |
7jti_H_L | 7jti | interphotoreceptor retinoid-binding protein (irbp) in complex with a monoclonal antibody (f3f5 mab5) | no | transport protein/immune system | 2020-08-17 | 2020-10-07 | electron microscopy | 7.4 | N.A. | N.A. | 32860273 | 10.1096/fj.202000796RR | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV7 | H | L | QVQLKESGPGLVAPSQSLSITCTVSGFLLISNGVHWVRQPPGKGLEWLGVIWAGGNTNYNSALMSRVSISKDNSKSQVFLKMKSLQTDDTAMYYCARDFYDYDVFYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLS | QVQLKESGPGLVAPSQSLSITCTVSGFLLISNGVHWVRQPPGKGLEWLGVIWAGGNTNYNSALMSRVSISKDNSKSQVFLKMKSLQTDDTAMYYCARDFYDYDVFYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLS | 22.400045 | 23.547493 | 221 | 210 | 221 | 210 | 221 | 210 | 95 | mab5 fab heavy chain | mab5 fab light chain | mus musculus | mus musculus | A | protein | retinol-binding protein 3 | bos taurus | 46 | 24 | 0.96 | HL | train |
7jtf_A_B | 7jtf | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 6a bound to broadly neutralizing antibody rm2-01 | yes | immune system/viral protein | 2020-08-17 | 2021-03-10 | x-ray diffraction | 3.35 | 0.296 | 0.242 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | A | B | QVQLVQSGAEVKKPGASVKLSCKASGFTFRIYAISWVRQAPGQGLEWMGEIVPLGGITNYAQNFQGRAAITADTSINTAYMELSSLRSDDTAVYYCARVRTALVGPREGIFDFWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | DIQMTQSPSSLSASVGDRVSITCRASQTISTYLAWYQQKPGKVPKLLIYTASTLETGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQHDSHPYSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | LVQSGAEVKKPGASVKLSCKASGFTFRIYAISWVRQAPGQGLEWMGEIVPLGGITNYAQNFQGRAAITADTSINTAYMELSSLRSDDTAVYYCARVRTALVGPREGIFDFWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | IQMTQSPSSLSASVGDRVSITCRASQTISTYLAWYQQKPGKVPKLLIYTASTLETGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQHDSHPYSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.197933 | 22.913485 | 229 | 214 | 211 | 206 | 222 | 211 | 98 | rm2-01 fab heavy chain | rm2-01 fab light chain | macaca mulatta | macaca mulatta | E | protein | envelope glycoprotein e2 | recombinant hepatitis c virus hk6a/jfh-1 | 25 | 13 | 1 | HL | train |
7jtf_C_D | 7jtf | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 6a bound to broadly neutralizing antibody rm2-01 | yes | immune system/viral protein | 2020-08-17 | 2021-03-10 | x-ray diffraction | 3.35 | 0.296 | 0.242 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | C | D | QVQLVQSGAEVKKPGASVKLSCKASGFTFRIYAISWVRQAPGQGLEWMGEIVPLGGITNYAQNFQGRAAITADTSINTAYMELSSLRSDDTAVYYCARVRTALVGPREGIFDFWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | DIQMTQSPSSLSASVGDRVSITCRASQTISTYLAWYQQKPGKVPKLLIYTASTLETGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQHDSHPYSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | LVQSGAEVKKPGASVKLSCKASGFTFRIYAISWVRQAPGQGLEWMGEIVPLGGITNYAQNFQGRAAITADTSINTAYMELSSLRSDDTAVYYCARVRTALVGPREGIFDFWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | IQMTQSPSSLSASVGDRVSITCRASQTISTYLAWYQQKPGKVPKLLIYTASTLETGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQHDSHPYSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.433418 | 22.731764 | 229 | 214 | 212 | 211 | 222 | 211 | 101 | rm2-01 fab heavy chain | rm2-01 fab light chain | macaca mulatta | macaca mulatta | F | protein | envelope glycoprotein e2 | recombinant hepatitis c virus hk6a/jfh-1 | 27 | 13 | 0.93 | HL | train |
7jtg_A_B | 7jtg | structure of hepatitis c virus envelope glycoprotein e2 core from genotype 6a bound to broadly neutralizing antibody rm11-43 | yes | immune system/viral protein | 2020-08-17 | 2021-03-10 | x-ray diffraction | 2.6 | 0.269 | 0.222 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | A | B | QVQLVQSGAEVKKPGASVKLSCKASGFTFRIYAISWVRQAPGQGLEWMGEIIPLGGITNYAQKFQGRVTITADTSTSTAYMELSSLRSEDTAVYYCARGETKMITVLAGTTGGGLDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | DIQMTQSPSSLSASVGDKVTITCHASQGISSWLAWYQQKPGKAPKPLIYAASSLQSGVPSRFSGGGSGADYTLTISSLQPEDFATYYCQQYDDLPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKLSCKASGFTFRIYAISWVRQAPGQGLEWMGEIIPLGGITNYAQKFQGRVTITADTSTSTAYMELSSLRSEDTAVYYCARGETKMITVLAGTTGGGLDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDKVTITCHASQGISSWLAWYQQKPGKAPKPLIYAASSLQSGVPSRFSGGGSGADYTLTISSLQPEDFATYYCQQYDDLPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.765972 | 22.893106 | 233 | 214 | 224 | 212 | 229 | 212 | 95 | rm11-43 fab heavy chain | rm11-43 fab light chain | macaca mulatta | macaca mulatta | E | protein | envelope glycoprotein e2 | recombinant hepatitis c virus hk6a/jfh-1 | 41 | 19 | 0.95 | HL | train |
7jtr_B | 7jtr | complex of maltose-binding protein (mbp) with single-chain fv (scfv) | yes | sugar binding protein/immune system | 2020-08-18 | 2021-05-05 | x-ray diffraction | 2.5 | 0.237 | 0.201 | 33896065 | 10.1002/pro.4088 | 0 | auth_asym_id | scFv | N.A. | N.A. | B | N.A. | MQVQLQQPGSELVRPGASVKLSCKASGYTFTNSWMHWVKQRPGQGLEWIGNIFPGNGNTNYDENFKSKATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGLFAYWGQGTLVTVSAGGGGSGGGGSGGGGSDIVMTQSPSSLAMSVGQKVTMSCKSSQSLLINNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHFTAPYTFGGGTKLEIKREHHHHHH | N.A. | QVQLQQPGSELVRPGASVKLSCKASGYTFTNSWMHWVKQRPGQGLEWIGNIFPGNGNTNYDENFKSKATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGLFAYWGQGTLVTVSAGGGGSGGGGSGGGGSDIVMTQSPSSLAMSVGQKVTMSCKSSQSLLINNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHFTAPYTFGGGTKLEIK | N.A. | 17.530422 | 0 | 251 | 0 | 225 | 0 | 242 | 0 | 0 | single-chain fv antibody fragment (scfv) | N.A. | mus musculus | N.A. | A | protein | maltose/maltodextrin-binding periplasmic protein | escherichia coli | 44 | 21 | 0.81 | H_only | train |
7jtr_D | 7jtr | complex of maltose-binding protein (mbp) with single-chain fv (scfv) | yes | sugar binding protein/immune system | 2020-08-18 | 2021-05-05 | x-ray diffraction | 2.5 | 0.237 | 0.201 | 33896065 | 10.1002/pro.4088 | 0 | auth_asym_id | scFv | N.A. | N.A. | D | N.A. | MQVQLQQPGSELVRPGASVKLSCKASGYTFTNSWMHWVKQRPGQGLEWIGNIFPGNGNTNYDENFKSKATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGLFAYWGQGTLVTVSAGGGGSGGGGSGGGGSDIVMTQSPSSLAMSVGQKVTMSCKSSQSLLINNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHFTAPYTFGGGTKLEIKREHHHHHH | N.A. | QVQLQQPGSELVRPGASVKLSCKASGYTFTNSWMHWVKQRPGQGLEWIGNIFPGNGNTNYDENFKSKATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGLFAYWGQGTLVTVSAGGGGSGGGGSGGGGSDIVMTQSPSSLAMSVGQKVTMSCKSSQSLLINNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHFTAPYTFGGGTKLEIK | N.A. | 17.459934 | 0 | 251 | 0 | 223 | 0 | 242 | 0 | 0 | single-chain fv antibody fragment (scfv) | N.A. | mus musculus | N.A. | C | protein | maltose/maltodextrin-binding periplasmic protein | escherichia coli | 37 | 17 | 0.77 | H_only | train |
7jtr_F | 7jtr | complex of maltose-binding protein (mbp) with single-chain fv (scfv) | yes | sugar binding protein/immune system | 2020-08-18 | 2021-05-05 | x-ray diffraction | 2.5 | 0.237 | 0.201 | 33896065 | 10.1002/pro.4088 | 0 | auth_asym_id | scFv | N.A. | N.A. | F | N.A. | MQVQLQQPGSELVRPGASVKLSCKASGYTFTNSWMHWVKQRPGQGLEWIGNIFPGNGNTNYDENFKSKATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGLFAYWGQGTLVTVSAGGGGSGGGGSGGGGSDIVMTQSPSSLAMSVGQKVTMSCKSSQSLLINNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHFTAPYTFGGGTKLEIKREHHHHHH | N.A. | QVQLQQPGSELVRPGASVKLSCKASGYTFTNSWMHWVKQRPGQGLEWIGNIFPGNGNTNYDENFKSKATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGLFAYWGQGTLVTVSAGGGGSGGGGSGGGGSDIVMTQSPSSLAMSVGQKVTMSCKSSQSLLINNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHFTAPYTFGGGTKLEIKR | N.A. | 17.578371 | 0 | 251 | 0 | 224 | 0 | 243 | 0 | 0 | single-chain fv antibody fragment (scfv) | N.A. | mus musculus | N.A. | E | protein | maltose/maltodextrin-binding periplasmic protein | escherichia coli | 40 | 19 | 0.76 | H_only | train |
7jtr_H | 7jtr | complex of maltose-binding protein (mbp) with single-chain fv (scfv) | yes | sugar binding protein/immune system | 2020-08-18 | 2021-05-05 | x-ray diffraction | 2.5 | 0.237 | 0.201 | 33896065 | 10.1002/pro.4088 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | MQVQLQQPGSELVRPGASVKLSCKASGYTFTNSWMHWVKQRPGQGLEWIGNIFPGNGNTNYDENFKSKATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGLFAYWGQGTLVTVSAGGGGSGGGGSGGGGSDIVMTQSPSSLAMSVGQKVTMSCKSSQSLLINNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHFTAPYTFGGGTKLEIKREHHHHHH | N.A. | QVQLQQPGSELVRPGASVKLSCKASGYTFTNSWMHWVKQRPGQGLEWIGNIFPGNGNTNYDENFKSKATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGLFAYWGQGTLVTVSAGGGGSGGGGSGGGGSDIVMTQSPSSLAMSVGQKVTMSCKSSQSLLINNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHFTAPYTFGGGTKLEIKR | N.A. | 17.545332 | 0 | 251 | 0 | 224 | 0 | 243 | 0 | 0 | single-chain fv antibody fragment (scfv) | N.A. | mus musculus | N.A. | G | protein | maltose/maltodextrin-binding periplasmic protein | escherichia coli | 40 | 18 | 0.78 | H_only | train |
7a3n_H_L | 7a3n | crystal structure of zika virus envelope glycoprotein in complex with the fab fragment of the broadly neutralizing human antibody ede1 c10 | no | viral protein | 2020-08-18 | 2021-12-08 | x-ray diffraction | 2.1 | 0.24 | 0.203 | 34852239 | 10.1016/j.cell.2021.11.010 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV2 | H | L | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCLEDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | SQSALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | ALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV | 23.363752 | 20.692812 | 268 | 217 | 219 | 207 | 228 | 208 | 97 | ede1 c10 fab | ede1 c10 fab | homo sapiens | homo sapiens | A | protein | core protein | zika virus | 44 | 16 | 0.89 | HL | train |
7a3o_H_L | 7a3o | crystal structure of dengue 1 virus envelope glycoprotein in complex with the scfv fragment of the broadly neutralizing human antibody ede1 c10 | no | viral protein | 2020-08-18 | 2021-12-08 | x-ray diffraction | 2.8 | 0.268 | 0.218 | 34852239 | 10.1016/j.cell.2021.11.010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | H | L | MAEVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVSSGTGGSGGGGSGGGG | SGGGASQSALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVLAAADDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVS | ALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVLAA | 14.292597 | 13.413153 | 144 | 154 | 127 | 110 | 127 | 110 | 55 | single chain variable fragment (scfv) from antibody ede1 c10 | single chain variable fragment (scfv) from antibody ede1 c10 | homo sapiens | homo sapiens | A | protein | core protein | dengue virus 1 | 28 | 13 | 0.87 | HL | train |
7a3p_H_L | 7a3p | crystal structure of dengue 3 virus envelope glycoprotein in complex with the scfv fragment of the broadly neutralizing human antibody ede1 c10 | no | viral protein | 2020-08-18 | 2021-12-08 | x-ray diffraction | 3.19 | 0.284 | 0.24 | 34852239 | 10.1016/j.cell.2021.11.010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | H | L | MAEVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVSSGTGGSGGGGSGGGG | SGGGASQSALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVLAAADDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | VQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTV | SALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVL | 14.157737 | 13.187047 | 144 | 154 | 125 | 109 | 125 | 109 | 51 | single chain variable fragment | single chain variable fragment | homo sapiens | homo sapiens | A;B | protein;protein | envelope protein e;envelope protein e | dengue virus 3;dengue virus 3 | 41;36 | 18;11 | 0.95;0.79 | HL | train |
7a3p_I_M | 7a3p | crystal structure of dengue 3 virus envelope glycoprotein in complex with the scfv fragment of the broadly neutralizing human antibody ede1 c10 | no | viral protein | 2020-08-18 | 2021-12-08 | x-ray diffraction | 3.19 | 0.284 | 0.24 | 34852239 | 10.1016/j.cell.2021.11.010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | I | M | MAEVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVSSGTGGSGGGGSGGGG | SGGGASQSALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVLAAADDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTV | SQSALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVL | 14.141165 | 13.24507 | 144 | 154 | 126 | 111 | 126 | 111 | 53 | single chain variable fragment | single chain variable fragment | homo sapiens | homo sapiens | A;B | protein;protein | envelope protein e;envelope protein e | dengue virus 3;dengue virus 3 | 25;43 | 8;19 | 0.89;0.9 | HL | train |
7a3t_H_L | 7a3t | crystal structure of dengue 3 virus envelope glycoprotein in complex with the fab fragment of the broadly neutralizing human antibody ede1 c8 | yes | viral protein | 2020-08-18 | 2021-12-08 | x-ray diffraction | 2.65 | 0.254 | 0.207 | 34852239 | 10.1016/j.cell.2021.11.010 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGLVQPGGSLRLSCSASGFTFSTYSMHWVRQAPGKGLEYVSAITGEGDSAFYADSVKGRFTISRDNSKNTLYFEMNSLRPEDTAVYYCVGGYSNFYYYYTMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPLEDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | RSEIVLTQSPATLSLSPGERATLSCRASQSISTFLAWYQHKPGQAPRLLIYDASTRATGVPARFSGSRSGTDFTLTISTLEPEDFAVYYCQQRYNWPPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCSASGFTFSTYSMHWVRQAPGKGLEYVSAITGEGDSAFYADSVKGRFTISRDNSKNTLYFEMNSLRPEDTAVYYCVGGYSNFYYYYTMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | SEIVLTQSPATLSLSPGERATLSCRASQSISTFLAWYQHKPGQAPRLLIYDASTRATGVPARFSGSRSGTDFTLTISTLEPEDFAVYYCQQRYNWPPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.837755 | 22.846092 | 272 | 217 | 219 | 215 | 222 | 215 | 95 | ede1 c8 antibody fab fragment | ede1 c8 antibody fab fragment | homo sapiens | homo sapiens | A | protein | core protein | dengue virus 3 | 11 | 5 | 0.83 | HL | train |
7a3u_H_L | 7a3u | crystal structure of zika virus envelope glycoprotein in complex with the divalent f(ab')2 fragment of the broadly neutralizing human antibody ede1 c10 | no | viral protein | 2020-08-18 | 2021-12-08 | x-ray diffraction | 3 | 0.273 | 0.224 | 34852239 | 10.1016/j.cell.2021.11.010 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV2 | H | L | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPPCPPLEDDDDKAGWSHPQFEKGGGS | SQSALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | ALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 24.108086 | 21.05614 | 266 | 217 | 224 | 204 | 231 | 213 | 103 | ede1 c10 antibody divalent f(ab')2 fragment | ede1 c10 divalent f(ab')2 fragment | homo sapiens | homo sapiens | A | protein | envelope protein | zika virus | 49 | 18 | 0.82 | HL | train |
7a4d_A | 7a4d | crystal structure of the aph coiled-coil in complex with nanobodies nb28 and nb30 | no | de novo protein | 2020-08-19 | 2021-05-05 | x-ray diffraction | 2.69 | 0.223 | 0.176 | 33893235 | 10.1073/pnas.2021899118 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | QVQLQESGGGLVQPGGSLRLSCAAPGFRLDNYVIGWFRQAPGKEREGVSCISSSAGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCATACYSSYVTYWGQGTQVTVSSGRYPYDVPDYGSGRA | N.A. | QLQESGGGLVQPGGSLRLSCAAPGFRLDNYVIGWFRQAPGKEREGVSCISSSAGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCATACYSSYVTYWGQGTQVTVSSGR | N.A. | 13.639749 | 0 | 133 | 0 | 118 | 0 | 118 | 0 | 0 | nanobody nb28 | N.A. | lama glama | N.A. | E | peptide | aph coiled-coil | synthetic construct | 36 | 10 | 0.43 | H_only | train |
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