pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
365 values
r_factor
stringclasses
358 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
abangle
stringlengths
40
40
annotation_H
stringlengths
44
44
annotation_L
stringlengths
44
44
imgt_H
stringlengths
37
37
imgt_L
stringlengths
37
37
sequence_raw
stringlengths
41
41
sequence_H
stringlengths
41
41
sequence_L
stringlengths
41
41
structure
stringlengths
38
38
structure_chothia
stringlengths
46
46
in_nr_set
bool
2 classes
curated_quality_dataset
bool
2 classes
split
stringclasses
3 values
7n3e
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/01/21
Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment C032
HOMO SAPIENS
homo sapiens
homo sapiens
null
Flyak, A.I., Bjorkman, P.J., Barnes, C.O.
2.06
X-RAY DIFFRACTION
0.228
0.2
false
true
IGHV5
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7n3e/abangle/7n3e.abangle
sabdab_dataset/7n3e/annotation/7n3e_H_VH.ann
sabdab_dataset/7n3e/annotation/7n3e_L_VL.ann
sabdab_dataset/7n3e/imgt/7n3e_H_H.ann
sabdab_dataset/7n3e/imgt/7n3e_L_L.ann
sabdab_dataset/7n3e/sequence/7n3e_raw.pdb
sabdab_dataset/7n3e/sequence/7n3e_H_VH.fa
sabdab_dataset/7n3e/sequence/7n3e_L_VL.fa
sabdab_dataset/7n3e/structure/7n3e.pdb
sabdab_dataset/7n3e/structure/chothia/7n3e.pdb
true
false
train
7n3f
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/01/21
Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment C080
HOMO SAPIENS
homo sapiens
homo sapiens
null
Flyak, A.I., Bjorkman, P.J., Barnes, C.O.
1.9
X-RAY DIFFRACTION
0.221
0.186
false
true
IGHV5
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7n3f/abangle/7n3f.abangle
sabdab_dataset/7n3f/annotation/7n3f_H_VH.ann
sabdab_dataset/7n3f/annotation/7n3f_L_VL.ann
sabdab_dataset/7n3f/imgt/7n3f_H_H.ann
sabdab_dataset/7n3f/imgt/7n3f_L_L.ann
sabdab_dataset/7n3f/sequence/7n3f_raw.pdb
sabdab_dataset/7n3f/sequence/7n3f_H_VH.fa
sabdab_dataset/7n3f/sequence/7n3f_L_VL.fa
sabdab_dataset/7n3f/structure/7n3f.pdb
sabdab_dataset/7n3f/structure/chothia/7n3f.pdb
false
false
train
7n3g
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/01/21
Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment C098
HOMO SAPIENS
homo sapiens
homo sapiens
null
Flyak, A.I., Bjorkman, P.J., Barnes, C.O.
1.42
X-RAY DIFFRACTION
0.205
0.186
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7n3g/abangle/7n3g.abangle
sabdab_dataset/7n3g/annotation/7n3g_H_VH.ann
sabdab_dataset/7n3g/annotation/7n3g_L_VL.ann
sabdab_dataset/7n3g/imgt/7n3g_H_H.ann
sabdab_dataset/7n3g/imgt/7n3g_L_L.ann
sabdab_dataset/7n3g/sequence/7n3g_raw.pdb
sabdab_dataset/7n3g/sequence/7n3g_H_VH.fa
sabdab_dataset/7n3g/sequence/7n3g_L_VL.fa
sabdab_dataset/7n3g/structure/7n3g.pdb
sabdab_dataset/7n3g/structure/chothia/7n3g.pdb
true
false
train
7n3h
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/01/21
Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment C099
HOMO SAPIENS
homo sapiens
homo sapiens
null
Flyak, A.I., Bjorkman, P.J., Barnes, C.O.
1.26
X-RAY DIFFRACTION
0.202
0.18
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7n3h/abangle/7n3h.abangle
sabdab_dataset/7n3h/annotation/7n3h_H_VH.ann
sabdab_dataset/7n3h/annotation/7n3h_L_VL.ann
sabdab_dataset/7n3h/imgt/7n3h_H_H.ann
sabdab_dataset/7n3h/imgt/7n3h_L_L.ann
sabdab_dataset/7n3h/sequence/7n3h_raw.pdb
sabdab_dataset/7n3h/sequence/7n3h_H_VH.fa
sabdab_dataset/7n3h/sequence/7n3h_L_VL.fa
sabdab_dataset/7n3h/structure/7n3h.pdb
sabdab_dataset/7n3h/structure/chothia/7n3h.pdb
false
false
test
7n3i
H
L
0
C
protein
null
spike protein s1
IMMUNE SYSTEM/VIRAL PROTEIN
06/01/21
Crystal structure of the SARS-CoV-2 receptor binding domain in complex with the human neutralizing antibody Fab fragment C098
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Flyak, A.I., Bjorkman, P.J., Barnes, C.O.
2.03
X-RAY DIFFRACTION
0.208
0.179
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7n3i/abangle/7n3i.abangle
sabdab_dataset/7n3i/annotation/7n3i_H_VH.ann
sabdab_dataset/7n3i/annotation/7n3i_L_VL.ann
sabdab_dataset/7n3i/imgt/7n3i_H_H.ann
sabdab_dataset/7n3i/imgt/7n3i_L_L.ann
sabdab_dataset/7n3i/sequence/7n3i_raw.pdb
sabdab_dataset/7n3i/sequence/7n3i_H_VH.fa
sabdab_dataset/7n3i/sequence/7n3i_L_VL.fa
sabdab_dataset/7n3i/structure/7n3i.pdb
sabdab_dataset/7n3i/structure/chothia/7n3i.pdb
false
false
train
7n4i
H
L
0
C
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
06/04/21
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibody WRAIR-2057.
HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Sankhala, R.S., Joyce, M.G.
2.284
X-RAY DIFFRACTION
0.238
0.2
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7n4i/abangle/7n4i.abangle
sabdab_dataset/7n4i/annotation/7n4i_H_VH.ann
sabdab_dataset/7n4i/annotation/7n4i_L_VL.ann
sabdab_dataset/7n4i/imgt/7n4i_H_H.ann
sabdab_dataset/7n4i/imgt/7n4i_L_L.ann
sabdab_dataset/7n4i/sequence/7n4i_raw.pdb
sabdab_dataset/7n4i/sequence/7n4i_H_VH.fa
sabdab_dataset/7n4i/sequence/7n4i_L_VL.fa
sabdab_dataset/7n4i/structure/7n4i.pdb
sabdab_dataset/7n4i/structure/chothia/7n4i.pdb
false
false
train
7n4j
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
06/04/21
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibody WRAIR-2173.
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Sankhala, R.S., Joyce, M.G.
2.207
X-RAY DIFFRACTION
0.207
0.172
false
true
IGHV4
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7n4j/abangle/7n4j.abangle
sabdab_dataset/7n4j/annotation/7n4j_H_VH.ann
sabdab_dataset/7n4j/annotation/7n4j_L_VL.ann
sabdab_dataset/7n4j/imgt/7n4j_H_H.ann
sabdab_dataset/7n4j/imgt/7n4j_L_L.ann
sabdab_dataset/7n4j/sequence/7n4j_raw.pdb
sabdab_dataset/7n4j/sequence/7n4j_H_VH.fa
sabdab_dataset/7n4j/sequence/7n4j_L_VL.fa
sabdab_dataset/7n4j/structure/7n4j.pdb
sabdab_dataset/7n4j/structure/chothia/7n4j.pdb
true
false
train
7n4l
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
06/04/21
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibody WRAIR-2125.
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Sankhala, R.S., Joyce, M.G.
3.601
X-RAY DIFFRACTION
0.329
0.262
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7n4l/abangle/7n4l.abangle
sabdab_dataset/7n4l/annotation/7n4l_H_VH.ann
sabdab_dataset/7n4l/annotation/7n4l_L_VL.ann
sabdab_dataset/7n4l/imgt/7n4l_H_H.ann
sabdab_dataset/7n4l/imgt/7n4l_L_L.ann
sabdab_dataset/7n4l/sequence/7n4l_raw.pdb
sabdab_dataset/7n4l/sequence/7n4l_H_VH.fa
sabdab_dataset/7n4l/sequence/7n4l_L_VL.fa
sabdab_dataset/7n4l/structure/7n4l.pdb
sabdab_dataset/7n4l/structure/chothia/7n4l.pdb
true
false
validation
7n4m
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
06/04/21
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibody WRAIR-2151.
HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Sankhala, R.S., Joyce, M.G.
3.79
X-RAY DIFFRACTION
0.317
0.258
false
true
IGHV4
IGLV6
Lambda
null
null
null
null
null
sabdab_dataset/7n4m/abangle/7n4m.abangle
sabdab_dataset/7n4m/annotation/7n4m_H_VH.ann
sabdab_dataset/7n4m/annotation/7n4m_L_VL.ann
sabdab_dataset/7n4m/imgt/7n4m_H_H.ann
sabdab_dataset/7n4m/imgt/7n4m_L_L.ann
sabdab_dataset/7n4m/sequence/7n4m_raw.pdb
sabdab_dataset/7n4m/sequence/7n4m_H_VH.fa
sabdab_dataset/7n4m/sequence/7n4m_L_VL.fa
sabdab_dataset/7n4m/structure/7n4m.pdb
sabdab_dataset/7n4m/structure/chothia/7n4m.pdb
false
false
train
7n4n
D
null
0
A
protein
null
beta-secretase 2
HYDROLASE/INHIBITOR
06/04/21
BACE-2 in complex with ligand 36
HOMO SAPIENS
homo sapiens
null
homo sapiens
Shaffer, P.L.
1.41
X-RAY DIFFRACTION
0.207
0.163
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7n4n/annotation/7n4n_D_VH.ann
null
sabdab_dataset/7n4n/imgt/7n4n_D_H.ann
null
sabdab_dataset/7n4n/sequence/7n4n_raw.pdb
sabdab_dataset/7n4n/sequence/7n4n_D_VH.fa
null
sabdab_dataset/7n4n/structure/7n4n.pdb
sabdab_dataset/7n4n/structure/chothia/7n4n.pdb
false
false
train
7n5h
E
F
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/05/21
Cryo-EM structure of broadly neutralizing antibody 2-36 in complex with prefusion SARS-CoV-2 spike glycoprotein
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Casner, R.G., Cerutti, G., Shapiro, L.
3.24
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7n5h/abangle/7n5h.abangle
sabdab_dataset/7n5h/annotation/7n5h_E_VH.ann
sabdab_dataset/7n5h/annotation/7n5h_F_VL.ann
sabdab_dataset/7n5h/imgt/7n5h_E_H.ann
sabdab_dataset/7n5h/imgt/7n5h_F_L.ann
sabdab_dataset/7n5h/sequence/7n5h_raw.pdb
sabdab_dataset/7n5h/sequence/7n5h_E_VH.fa
sabdab_dataset/7n5h/sequence/7n5h_F_VL.fa
sabdab_dataset/7n5h/structure/7n5h.pdb
sabdab_dataset/7n5h/structure/chothia/7n5h.pdb
false
false
train
7n5h
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/05/21
Cryo-EM structure of broadly neutralizing antibody 2-36 in complex with prefusion SARS-CoV-2 spike glycoprotein
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Casner, R.G., Cerutti, G., Shapiro, L.
3.24
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7n5h/abangle/7n5h.abangle
sabdab_dataset/7n5h/annotation/7n5h_H_VH.ann
sabdab_dataset/7n5h/annotation/7n5h_L_VL.ann
sabdab_dataset/7n5h/imgt/7n5h_H_H.ann
sabdab_dataset/7n5h/imgt/7n5h_L_L.ann
sabdab_dataset/7n5h/sequence/7n5h_raw.pdb
sabdab_dataset/7n5h/sequence/7n5h_H_VH.fa
sabdab_dataset/7n5h/sequence/7n5h_L_VL.fa
sabdab_dataset/7n5h/structure/7n5h.pdb
sabdab_dataset/7n5h/structure/chothia/7n5h.pdb
false
false
train
7n5h
J
K
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/05/21
Cryo-EM structure of broadly neutralizing antibody 2-36 in complex with prefusion SARS-CoV-2 spike glycoprotein
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Casner, R.G., Cerutti, G., Shapiro, L.
3.24
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7n5h/abangle/7n5h.abangle
sabdab_dataset/7n5h/annotation/7n5h_J_VH.ann
sabdab_dataset/7n5h/annotation/7n5h_K_VL.ann
sabdab_dataset/7n5h/imgt/7n5h_J_H.ann
sabdab_dataset/7n5h/imgt/7n5h_K_L.ann
sabdab_dataset/7n5h/sequence/7n5h_raw.pdb
sabdab_dataset/7n5h/sequence/7n5h_J_VH.fa
sabdab_dataset/7n5h/sequence/7n5h_K_VL.fa
sabdab_dataset/7n5h/structure/7n5h.pdb
sabdab_dataset/7n5h/structure/chothia/7n5h.pdb
false
false
test
7n62
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/Immune System
06/07/21
SARS-CoV-2 Spike (2P) in complex with C12C9 Fab (NTD local reconstruction)
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Windsor, I.W., Jenni, S., Bajic, G., Tong, P., Gautam, A.K., Wesemann, D.R., Harrison, S.C.
4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7n62/abangle/7n62.abangle
sabdab_dataset/7n62/annotation/7n62_H_VH.ann
sabdab_dataset/7n62/annotation/7n62_L_VL.ann
sabdab_dataset/7n62/imgt/7n62_H_H.ann
sabdab_dataset/7n62/imgt/7n62_L_L.ann
sabdab_dataset/7n62/sequence/7n62_raw.pdb
sabdab_dataset/7n62/sequence/7n62_H_VH.fa
sabdab_dataset/7n62/sequence/7n62_L_VL.fa
sabdab_dataset/7n62/structure/7n62.pdb
sabdab_dataset/7n62/structure/chothia/7n62.pdb
false
false
test
7n64
H
L
0
B | A
protein | protein
NA | NA
spike glycoprotein | spike glycoprotein
VIRAL PROTEIN/Immune System
06/07/21
SARS-CoV-2 Spike (2P) in complex with G32R7 Fab (RBD and NTD local reconstruction)
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2
Windsor, I.W., Jenni, S., Tong, P., Gautam, A.K., Wesemann, D.R., Harrison, S.C.
4.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7n64/abangle/7n64.abangle
sabdab_dataset/7n64/annotation/7n64_H_VH.ann
sabdab_dataset/7n64/annotation/7n64_L_VL.ann
sabdab_dataset/7n64/imgt/7n64_H_H.ann
sabdab_dataset/7n64/imgt/7n64_L_L.ann
sabdab_dataset/7n64/sequence/7n64_raw.pdb
sabdab_dataset/7n64/sequence/7n64_H_VH.fa
sabdab_dataset/7n64/sequence/7n64_L_VL.fa
sabdab_dataset/7n64/structure/7n64.pdb
sabdab_dataset/7n64/structure/chothia/7n64.pdb
false
false
train
7n65
C
D
0
A
protein
null
envelope glycoprotein gp41
VIRAL PROTEIN/IMMUNE SYSTEM
06/07/21
Complex structure of HIV superinfection Fab QA013.2 and BG505.SOSIP.664
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Mangala Prasad, V., Shipley, M.M., Overbaugh, J.M., Lee, K.K.
4.15
ELECTRON MICROSCOPY
null
null
false
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7n65/abangle/7n65.abangle
sabdab_dataset/7n65/annotation/7n65_C_VH.ann
sabdab_dataset/7n65/annotation/7n65_D_VL.ann
null
null
sabdab_dataset/7n65/sequence/7n65_raw.pdb
sabdab_dataset/7n65/sequence/7n65_C_VH.fa
sabdab_dataset/7n65/sequence/7n65_D_VL.fa
sabdab_dataset/7n65/structure/7n65.pdb
sabdab_dataset/7n65/structure/chothia/7n65.pdb
false
false
train
7n65
G
H
0
E
protein
null
envelope glycoprotein gp41
VIRAL PROTEIN/IMMUNE SYSTEM
06/07/21
Complex structure of HIV superinfection Fab QA013.2 and BG505.SOSIP.664
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Mangala Prasad, V., Shipley, M.M., Overbaugh, J.M., Lee, K.K.
4.15
ELECTRON MICROSCOPY
null
null
false
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7n65/abangle/7n65.abangle
sabdab_dataset/7n65/annotation/7n65_G_VH.ann
sabdab_dataset/7n65/annotation/7n65_H_VL.ann
null
null
sabdab_dataset/7n65/sequence/7n65_raw.pdb
sabdab_dataset/7n65/sequence/7n65_G_VH.fa
sabdab_dataset/7n65/sequence/7n65_H_VL.fa
sabdab_dataset/7n65/structure/7n65.pdb
sabdab_dataset/7n65/structure/chothia/7n65.pdb
false
false
test
7n65
K
L
0
I
protein
null
envelope glycoprotein gp41
VIRAL PROTEIN/IMMUNE SYSTEM
06/07/21
Complex structure of HIV superinfection Fab QA013.2 and BG505.SOSIP.664
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Mangala Prasad, V., Shipley, M.M., Overbaugh, J.M., Lee, K.K.
4.15
ELECTRON MICROSCOPY
null
null
false
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7n65/abangle/7n65.abangle
sabdab_dataset/7n65/annotation/7n65_K_VH.ann
sabdab_dataset/7n65/annotation/7n65_L_VL.ann
null
null
sabdab_dataset/7n65/sequence/7n65_raw.pdb
sabdab_dataset/7n65/sequence/7n65_K_VH.fa
sabdab_dataset/7n65/sequence/7n65_L_VL.fa
sabdab_dataset/7n65/structure/7n65.pdb
sabdab_dataset/7n65/structure/chothia/7n65.pdb
false
false
test
7n6p
A
B
0
null
null
null
null
IMMUNE SYSTEM
06/08/21
Crystal structure of the anti-EBOV and SUDV monoclonal antibody 1C3 Fab
HOMO SAPIENS
homo sapiens
homo sapiens
null
Milligan, J.C., Yu, X., Buck, T., Saphire, E.O.
2.15
X-RAY DIFFRACTION
0.231
0.175
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/7n6p/abangle/7n6p.abangle
sabdab_dataset/7n6p/annotation/7n6p_A_VH.ann
sabdab_dataset/7n6p/annotation/7n6p_B_VL.ann
sabdab_dataset/7n6p/imgt/7n6p_A_H.ann
sabdab_dataset/7n6p/imgt/7n6p_B_L.ann
sabdab_dataset/7n6p/sequence/7n6p_raw.pdb
sabdab_dataset/7n6p/sequence/7n6p_A_VH.fa
sabdab_dataset/7n6p/sequence/7n6p_B_VL.fa
sabdab_dataset/7n6p/structure/7n6p.pdb
sabdab_dataset/7n6p/structure/chothia/7n6p.pdb
true
false
test
7n6p
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/08/21
Crystal structure of the anti-EBOV and SUDV monoclonal antibody 1C3 Fab
HOMO SAPIENS
homo sapiens
homo sapiens
null
Milligan, J.C., Yu, X., Buck, T., Saphire, E.O.
2.15
X-RAY DIFFRACTION
0.231
0.175
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/7n6p/abangle/7n6p.abangle
sabdab_dataset/7n6p/annotation/7n6p_H_VH.ann
sabdab_dataset/7n6p/annotation/7n6p_L_VL.ann
sabdab_dataset/7n6p/imgt/7n6p_H_H.ann
sabdab_dataset/7n6p/imgt/7n6p_L_L.ann
sabdab_dataset/7n6p/sequence/7n6p_raw.pdb
sabdab_dataset/7n6p/sequence/7n6p_H_VH.fa
sabdab_dataset/7n6p/sequence/7n6p_L_VL.fa
sabdab_dataset/7n6p/structure/7n6p.pdb
sabdab_dataset/7n6p/structure/chothia/7n6p.pdb
true
false
train
7n8h
C
B
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/14/21
SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 Global Refinement
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7n8h/abangle/7n8h.abangle
sabdab_dataset/7n8h/annotation/7n8h_C_VH.ann
sabdab_dataset/7n8h/annotation/7n8h_B_VL.ann
sabdab_dataset/7n8h/imgt/7n8h_C_H.ann
sabdab_dataset/7n8h/imgt/7n8h_B_L.ann
sabdab_dataset/7n8h/sequence/7n8h_raw.pdb
sabdab_dataset/7n8h/sequence/7n8h_C_VH.fa
sabdab_dataset/7n8h/sequence/7n8h_B_VL.fa
sabdab_dataset/7n8h/structure/7n8h.pdb
sabdab_dataset/7n8h/structure/chothia/7n8h.pdb
false
false
test
7n8h
E
D
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/14/21
SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 Global Refinement
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7n8h/abangle/7n8h.abangle
sabdab_dataset/7n8h/annotation/7n8h_E_VH.ann
sabdab_dataset/7n8h/annotation/7n8h_D_VL.ann
sabdab_dataset/7n8h/imgt/7n8h_E_H.ann
sabdab_dataset/7n8h/imgt/7n8h_D_L.ann
sabdab_dataset/7n8h/sequence/7n8h_raw.pdb
sabdab_dataset/7n8h/sequence/7n8h_E_VH.fa
sabdab_dataset/7n8h/sequence/7n8h_D_VL.fa
sabdab_dataset/7n8h/structure/7n8h.pdb
sabdab_dataset/7n8h/structure/chothia/7n8h.pdb
false
false
test
7n8h
H
G
0
F
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/14/21
SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 Global Refinement
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7n8h/abangle/7n8h.abangle
sabdab_dataset/7n8h/annotation/7n8h_H_VH.ann
sabdab_dataset/7n8h/annotation/7n8h_G_VL.ann
sabdab_dataset/7n8h/imgt/7n8h_H_H.ann
sabdab_dataset/7n8h/imgt/7n8h_G_L.ann
sabdab_dataset/7n8h/sequence/7n8h_raw.pdb
sabdab_dataset/7n8h/sequence/7n8h_H_VH.fa
sabdab_dataset/7n8h/sequence/7n8h_G_VL.fa
sabdab_dataset/7n8h/structure/7n8h.pdb
sabdab_dataset/7n8h/structure/chothia/7n8h.pdb
false
false
train
7n8h
J
I
0
F
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/14/21
SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 Global Refinement
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7n8h/abangle/7n8h.abangle
sabdab_dataset/7n8h/annotation/7n8h_J_VH.ann
sabdab_dataset/7n8h/annotation/7n8h_I_VL.ann
sabdab_dataset/7n8h/imgt/7n8h_J_H.ann
sabdab_dataset/7n8h/imgt/7n8h_I_L.ann
sabdab_dataset/7n8h/sequence/7n8h_raw.pdb
sabdab_dataset/7n8h/sequence/7n8h_J_VH.fa
sabdab_dataset/7n8h/sequence/7n8h_I_VL.fa
sabdab_dataset/7n8h/structure/7n8h.pdb
sabdab_dataset/7n8h/structure/chothia/7n8h.pdb
false
false
train
7n8h
M
L
0
K
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/14/21
SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 Global Refinement
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7n8h/abangle/7n8h.abangle
sabdab_dataset/7n8h/annotation/7n8h_M_VH.ann
sabdab_dataset/7n8h/annotation/7n8h_L_VL.ann
sabdab_dataset/7n8h/imgt/7n8h_M_H.ann
sabdab_dataset/7n8h/imgt/7n8h_L_L.ann
sabdab_dataset/7n8h/sequence/7n8h_raw.pdb
sabdab_dataset/7n8h/sequence/7n8h_M_VH.fa
sabdab_dataset/7n8h/sequence/7n8h_L_VL.fa
sabdab_dataset/7n8h/structure/7n8h.pdb
sabdab_dataset/7n8h/structure/chothia/7n8h.pdb
false
false
train
7n8h
O
N
0
K
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/14/21
SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 Global Refinement
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7n8h/abangle/7n8h.abangle
sabdab_dataset/7n8h/annotation/7n8h_O_VH.ann
sabdab_dataset/7n8h/annotation/7n8h_N_VL.ann
sabdab_dataset/7n8h/imgt/7n8h_O_H.ann
sabdab_dataset/7n8h/imgt/7n8h_N_L.ann
sabdab_dataset/7n8h/sequence/7n8h_raw.pdb
sabdab_dataset/7n8h/sequence/7n8h_O_VH.fa
sabdab_dataset/7n8h/sequence/7n8h_N_VL.fa
sabdab_dataset/7n8h/structure/7n8h.pdb
sabdab_dataset/7n8h/structure/chothia/7n8h.pdb
false
false
train
7n8i
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/14/21
SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 (Local Refinement of the NTD/S2L20)
HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7n8i/abangle/7n8i.abangle
sabdab_dataset/7n8i/annotation/7n8i_H_VH.ann
sabdab_dataset/7n8i/annotation/7n8i_L_VL.ann
sabdab_dataset/7n8i/imgt/7n8i_H_H.ann
sabdab_dataset/7n8i/imgt/7n8i_L_L.ann
sabdab_dataset/7n8i/sequence/7n8i_raw.pdb
sabdab_dataset/7n8i/sequence/7n8i_H_VH.fa
sabdab_dataset/7n8i/sequence/7n8i_L_VL.fa
sabdab_dataset/7n8i/structure/7n8i.pdb
sabdab_dataset/7n8i/structure/chothia/7n8i.pdb
false
false
train
7n8q
C
D
0
A
protein
null
clade a/e 93th057 hiv-1 gp120 core
IMMUNE SYSTEM
06/15/21
Rhesusized RV305 DH677.3 Fab bound to Clade A/E 93TH057 HIV-1 gp120 core.
HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; SYNTHETIC CONSTRUCT
macaca mulatta
macaca mulatta
human immunodeficiency virus 1
Tolbert, W.D., Pazgier, M.
2.9
X-RAY DIFFRACTION
0.296
0.255
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7n8q/abangle/7n8q.abangle
sabdab_dataset/7n8q/annotation/7n8q_C_VH.ann
sabdab_dataset/7n8q/annotation/7n8q_D_VL.ann
sabdab_dataset/7n8q/imgt/7n8q_C_H.ann
sabdab_dataset/7n8q/imgt/7n8q_D_L.ann
sabdab_dataset/7n8q/sequence/7n8q_raw.pdb
sabdab_dataset/7n8q/sequence/7n8q_C_VH.fa
sabdab_dataset/7n8q/sequence/7n8q_D_VL.fa
sabdab_dataset/7n8q/structure/7n8q.pdb
sabdab_dataset/7n8q/structure/chothia/7n8q.pdb
false
false
train
7n8q
H
L
0
G
protein
null
clade a/e 93th057 hiv-1 gp120 core
IMMUNE SYSTEM
06/15/21
Rhesusized RV305 DH677.3 Fab bound to Clade A/E 93TH057 HIV-1 gp120 core.
HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; SYNTHETIC CONSTRUCT
macaca mulatta
macaca mulatta
human immunodeficiency virus 1
Tolbert, W.D., Pazgier, M.
2.9
X-RAY DIFFRACTION
0.296
0.255
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7n8q/abangle/7n8q.abangle
sabdab_dataset/7n8q/annotation/7n8q_H_VH.ann
sabdab_dataset/7n8q/annotation/7n8q_L_VL.ann
sabdab_dataset/7n8q/imgt/7n8q_H_H.ann
sabdab_dataset/7n8q/imgt/7n8q_L_L.ann
sabdab_dataset/7n8q/sequence/7n8q_raw.pdb
sabdab_dataset/7n8q/sequence/7n8q_H_VH.fa
sabdab_dataset/7n8q/sequence/7n8q_L_VL.fa
sabdab_dataset/7n8q/structure/7n8q.pdb
sabdab_dataset/7n8q/structure/chothia/7n8q.pdb
false
false
validation
7n9a
A
null
0
E
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
06/17/21
Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS RBD with NB21
LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
lama glama
null
severe acute respiratory syndrome coronavirus2
Sun, D., Zhang, C., Shi, Y.
3.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9a/annotation/7n9a_A_VH.ann
null
sabdab_dataset/7n9a/imgt/7n9a_A_H.ann
null
sabdab_dataset/7n9a/sequence/7n9a_raw.pdb
sabdab_dataset/7n9a/sequence/7n9a_A_VH.fa
null
sabdab_dataset/7n9a/structure/7n9a.pdb
sabdab_dataset/7n9a/structure/chothia/7n9a.pdb
false
false
train
7n9b
D
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/17/21
Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS with NB21
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA
lama glama
null
severe acute respiratory syndrome coronavirus2
Sun, D., Zhang, C., Shi, Y.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9b/annotation/7n9b_D_VH.ann
null
sabdab_dataset/7n9b/imgt/7n9b_D_H.ann
null
sabdab_dataset/7n9b/sequence/7n9b_raw.pdb
sabdab_dataset/7n9b/sequence/7n9b_D_VH.fa
null
sabdab_dataset/7n9b/structure/7n9b.pdb
sabdab_dataset/7n9b/structure/chothia/7n9b.pdb
false
false
train
7n9b
F
null
0
C | B
protein | protein
NA | NA
spike glycoprotein | spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/17/21
Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS with NB21
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA
lama glama
null
severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2
Sun, D., Zhang, C., Shi, Y.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9b/annotation/7n9b_F_VH.ann
null
sabdab_dataset/7n9b/imgt/7n9b_F_H.ann
null
sabdab_dataset/7n9b/sequence/7n9b_raw.pdb
sabdab_dataset/7n9b/sequence/7n9b_F_VH.fa
null
sabdab_dataset/7n9b/structure/7n9b.pdb
sabdab_dataset/7n9b/structure/chothia/7n9b.pdb
false
false
train
7n9c
D
null
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/17/21
Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS with NB95
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA
lama glama
null
severe acute respiratory syndrome coronavirus2
Sun, D., Zhang, C., Shi, Y.
3.71
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9c/annotation/7n9c_D_VH.ann
null
sabdab_dataset/7n9c/imgt/7n9c_D_H.ann
null
sabdab_dataset/7n9c/sequence/7n9c_raw.pdb
sabdab_dataset/7n9c/sequence/7n9c_D_VH.fa
null
sabdab_dataset/7n9c/structure/7n9c.pdb
sabdab_dataset/7n9c/structure/chothia/7n9c.pdb
false
false
train
7n9c
E
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/17/21
Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS with NB95
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA
lama glama
null
severe acute respiratory syndrome coronavirus2
Sun, D., Zhang, C., Shi, Y.
3.71
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9c/annotation/7n9c_E_VH.ann
null
sabdab_dataset/7n9c/imgt/7n9c_E_H.ann
null
sabdab_dataset/7n9c/sequence/7n9c_raw.pdb
sabdab_dataset/7n9c/sequence/7n9c_E_VH.fa
null
sabdab_dataset/7n9c/structure/7n9c.pdb
sabdab_dataset/7n9c/structure/chothia/7n9c.pdb
false
false
train
7n9e
D
null
0
A | B
protein | protein
NA | NA
spike glycoprotein | spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/17/21
Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS with NB34
LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
lama glama
null
severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2
Sun, D., Zhang, C., Shi, Y.
3.52
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7n9e/annotation/7n9e_D_VH.ann
null
sabdab_dataset/7n9e/imgt/7n9e_D_H.ann
null
sabdab_dataset/7n9e/sequence/7n9e_raw.pdb
sabdab_dataset/7n9e/sequence/7n9e_D_VH.fa
null
sabdab_dataset/7n9e/structure/7n9e.pdb
sabdab_dataset/7n9e/structure/chothia/7n9e.pdb
false
false
train
7n9t
D
null
0
C
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/18/21
CryoEM structure of SARS-CoV-2 Spike in complex with Nb17
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
3.18
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9t/annotation/7n9t_D_VH.ann
null
sabdab_dataset/7n9t/imgt/7n9t_D_H.ann
null
sabdab_dataset/7n9t/sequence/7n9t_raw.pdb
sabdab_dataset/7n9t/sequence/7n9t_D_VH.fa
null
sabdab_dataset/7n9t/structure/7n9t.pdb
sabdab_dataset/7n9t/structure/chothia/7n9t.pdb
false
false
train
7n9t
E
null
0
A
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/18/21
CryoEM structure of SARS-CoV-2 Spike in complex with Nb17
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
3.18
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9t/annotation/7n9t_E_VH.ann
null
sabdab_dataset/7n9t/imgt/7n9t_E_H.ann
null
sabdab_dataset/7n9t/sequence/7n9t_raw.pdb
sabdab_dataset/7n9t/sequence/7n9t_E_VH.fa
null
sabdab_dataset/7n9t/structure/7n9t.pdb
sabdab_dataset/7n9t/structure/chothia/7n9t.pdb
false
false
test
7n9t
F
null
0
B
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/18/21
CryoEM structure of SARS-CoV-2 Spike in complex with Nb17
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA
lama glama
null
severe acute respiratory syndrome coronavirus2
Huang, W., Taylor, D.
3.18
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9t/annotation/7n9t_F_VH.ann
null
sabdab_dataset/7n9t/imgt/7n9t_F_H.ann
null
sabdab_dataset/7n9t/sequence/7n9t_raw.pdb
sabdab_dataset/7n9t/sequence/7n9t_F_VH.fa
null
sabdab_dataset/7n9t/structure/7n9t.pdb
sabdab_dataset/7n9t/structure/chothia/7n9t.pdb
false
false
train
7n9v
B
null
0
C
protein
null
capsid protein
VIRAL PROTEIN/IMMUNE SYSTEM
06/18/21
CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions
Human immunodeficiency virus 1; Lama glama
lama glama
null
human immunodeficiency virus 1
Tripler, T.N.
3.45
X-RAY DIFFRACTION
0.258
0.212
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9v/annotation/7n9v_B_VH.ann
null
sabdab_dataset/7n9v/imgt/7n9v_B_H.ann
null
sabdab_dataset/7n9v/sequence/7n9v_raw.pdb
sabdab_dataset/7n9v/sequence/7n9v_B_VH.fa
null
sabdab_dataset/7n9v/structure/7n9v.pdb
sabdab_dataset/7n9v/structure/chothia/7n9v.pdb
false
false
train
7n9v
E
null
0
D
protein
null
capsid protein
VIRAL PROTEIN/IMMUNE SYSTEM
06/18/21
CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions
Human immunodeficiency virus 1; Lama glama
lama glama
null
human immunodeficiency virus 1
Tripler, T.N.
3.45
X-RAY DIFFRACTION
0.258
0.212
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9v/annotation/7n9v_E_VH.ann
null
sabdab_dataset/7n9v/imgt/7n9v_E_H.ann
null
sabdab_dataset/7n9v/sequence/7n9v_raw.pdb
sabdab_dataset/7n9v/sequence/7n9v_E_VH.fa
null
sabdab_dataset/7n9v/structure/7n9v.pdb
sabdab_dataset/7n9v/structure/chothia/7n9v.pdb
false
false
validation
7n9v
F
null
0
G
protein
null
capsid protein
VIRAL PROTEIN/IMMUNE SYSTEM
06/18/21
CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions
Human immunodeficiency virus 1; Lama glama
lama glama
null
human immunodeficiency virus 1
Tripler, T.N.
3.45
X-RAY DIFFRACTION
0.258
0.212
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9v/annotation/7n9v_F_VH.ann
null
sabdab_dataset/7n9v/imgt/7n9v_F_H.ann
null
sabdab_dataset/7n9v/sequence/7n9v_raw.pdb
sabdab_dataset/7n9v/sequence/7n9v_F_VH.fa
null
sabdab_dataset/7n9v/structure/7n9v.pdb
sabdab_dataset/7n9v/structure/chothia/7n9v.pdb
false
false
train
7n9v
H
null
0
K
protein
null
capsid protein
VIRAL PROTEIN/IMMUNE SYSTEM
06/18/21
CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions
Human immunodeficiency virus 1; Lama glama
lama glama
null
human immunodeficiency virus 1
Tripler, T.N.
3.45
X-RAY DIFFRACTION
0.258
0.212
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9v/annotation/7n9v_H_VH.ann
null
sabdab_dataset/7n9v/imgt/7n9v_H_H.ann
null
sabdab_dataset/7n9v/sequence/7n9v_raw.pdb
sabdab_dataset/7n9v/sequence/7n9v_H_VH.fa
null
sabdab_dataset/7n9v/structure/7n9v.pdb
sabdab_dataset/7n9v/structure/chothia/7n9v.pdb
false
false
train
7n9v
J
null
0
I
protein
null
capsid protein
VIRAL PROTEIN/IMMUNE SYSTEM
06/18/21
CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions
Human immunodeficiency virus 1; Lama glama
lama glama
null
human immunodeficiency virus 1
Tripler, T.N.
3.45
X-RAY DIFFRACTION
0.258
0.212
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9v/annotation/7n9v_J_VH.ann
null
sabdab_dataset/7n9v/imgt/7n9v_J_H.ann
null
sabdab_dataset/7n9v/sequence/7n9v_raw.pdb
sabdab_dataset/7n9v/sequence/7n9v_J_VH.fa
null
sabdab_dataset/7n9v/structure/7n9v.pdb
sabdab_dataset/7n9v/structure/chothia/7n9v.pdb
false
false
test
7n9v
L
null
0
A
protein
null
capsid protein
VIRAL PROTEIN/IMMUNE SYSTEM
06/18/21
CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions
Human immunodeficiency virus 1; Lama glama
lama glama
null
human immunodeficiency virus 1
Tripler, T.N.
3.45
X-RAY DIFFRACTION
0.258
0.212
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7n9v/annotation/7n9v_L_VH.ann
null
sabdab_dataset/7n9v/imgt/7n9v_L_H.ann
null
sabdab_dataset/7n9v/sequence/7n9v_raw.pdb
sabdab_dataset/7n9v/sequence/7n9v_L_VH.fa
null
sabdab_dataset/7n9v/structure/7n9v.pdb
sabdab_dataset/7n9v/structure/chothia/7n9v.pdb
false
false
train
7na7
N
n
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
06/20/21
Structures of human ghrelin receptor-Gi complexes with ghrelin and a synthetic agonist
HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens
Liu, H., Sun, D., Sun, J., Zhang, C.
2.7
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7na7/abangle/7na7.abangle
sabdab_dataset/7na7/annotation/7na7_N_VH.ann
sabdab_dataset/7na7/annotation/7na7_N_VL.ann
sabdab_dataset/7na7/imgt/7na7_N_H.ann
sabdab_dataset/7na7/imgt/7na7_N_L.ann
sabdab_dataset/7na7/sequence/7na7_raw.pdb
sabdab_dataset/7na7/sequence/7na7_N_VH.fa
sabdab_dataset/7na7/sequence/7na7_N_VL.fa
sabdab_dataset/7na7/structure/7na7.pdb
sabdab_dataset/7na7/structure/chothia/7na7.pdb
false
false
train
7na8
N
n
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
06/20/21
Structures of human ghrelin receptor-Gi complexes with ghrelin and a synthetic agonist
HOMO SAPIENS; MUS MUSCULUS
mus musculus
null
homo sapiens | homo sapiens
Liu, H., Sun, D., Sun, J., Zhang, C.
2.7
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7na8/abangle/7na8.abangle
sabdab_dataset/7na8/annotation/7na8_N_VH.ann
sabdab_dataset/7na8/annotation/7na8_N_VL.ann
sabdab_dataset/7na8/imgt/7na8_N_H.ann
sabdab_dataset/7na8/imgt/7na8_N_L.ann
sabdab_dataset/7na8/sequence/7na8_raw.pdb
sabdab_dataset/7na8/sequence/7na8_N_VH.fa
sabdab_dataset/7na8/sequence/7na8_N_VL.fa
sabdab_dataset/7na8/structure/7na8.pdb
sabdab_dataset/7na8/structure/chothia/7na8.pdb
false
false
train
7na9
D
null
0
A
protein
null
botulinum neurotoxin type b
TOXIN
06/20/21
Crystal structure of BoNT/B-LC-JSG-C1
CLOSTRIDIUM BOTULINUM; VICUGNA PACOS
vicugna pacos
null
clostridium botulinum
Lam, K., Jin, R.
1.76
X-RAY DIFFRACTION
0.205
0.167
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7na9/annotation/7na9_D_VH.ann
null
sabdab_dataset/7na9/imgt/7na9_D_H.ann
null
sabdab_dataset/7na9/sequence/7na9_raw.pdb
sabdab_dataset/7na9/sequence/7na9_D_VH.fa
null
sabdab_dataset/7na9/structure/7na9.pdb
sabdab_dataset/7na9/structure/chothia/7na9.pdb
true
true
train
7nab
A
B
0
D
peptide
null
spike protein s2
VIRAL PROTEIN/IMMUNE SYSTEM
06/21/21
Crystal structure of human neutralizing mAb CV3-25 binding to SARS-CoV-2 S MPER peptide 1140-1165
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Chen, Y., Tolbert, W.D., Pazgier, M.
2.15
X-RAY DIFFRACTION
0.239
0.185
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7nab/abangle/7nab.abangle
sabdab_dataset/7nab/annotation/7nab_A_VH.ann
sabdab_dataset/7nab/annotation/7nab_B_VL.ann
sabdab_dataset/7nab/imgt/7nab_A_H.ann
sabdab_dataset/7nab/imgt/7nab_B_L.ann
sabdab_dataset/7nab/sequence/7nab_raw.pdb
sabdab_dataset/7nab/sequence/7nab_A_VH.fa
sabdab_dataset/7nab/sequence/7nab_B_VL.fa
sabdab_dataset/7nab/structure/7nab.pdb
sabdab_dataset/7nab/structure/chothia/7nab.pdb
false
false
train
7nab
H
L
0
C
peptide
null
spike protein s2
VIRAL PROTEIN/IMMUNE SYSTEM
06/21/21
Crystal structure of human neutralizing mAb CV3-25 binding to SARS-CoV-2 S MPER peptide 1140-1165
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Chen, Y., Tolbert, W.D., Pazgier, M.
2.15
X-RAY DIFFRACTION
0.239
0.185
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7nab/abangle/7nab.abangle
sabdab_dataset/7nab/annotation/7nab_H_VH.ann
sabdab_dataset/7nab/annotation/7nab_L_VL.ann
sabdab_dataset/7nab/imgt/7nab_H_H.ann
sabdab_dataset/7nab/imgt/7nab_L_L.ann
sabdab_dataset/7nab/sequence/7nab_raw.pdb
sabdab_dataset/7nab/sequence/7nab_H_VH.fa
sabdab_dataset/7nab/sequence/7nab_L_VL.fa
sabdab_dataset/7nab/structure/7nab.pdb
sabdab_dataset/7nab/structure/chothia/7nab.pdb
false
false
train
7nbb
D
null
0
A | C | B
protein | protein | protein
NA | NA | NA
polyubiquitin-b | polyubiquitin-b | polyubiquitin-b
SIGNALING PROTEIN
08/10/22
Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with synthetic nanobody NbSL3
Homo sapiens; synthetic construct
synthetic construct
null
homo sapiens | homo sapiens | homo sapiens
Lange, S.M., Kulathu, Y.
1.55
X-RAY DIFFRACTION
0.212
0.175
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7nbb/annotation/7nbb_D_VH.ann
null
sabdab_dataset/7nbb/imgt/7nbb_D_H.ann
null
sabdab_dataset/7nbb/sequence/7nbb_raw.pdb
sabdab_dataset/7nbb/sequence/7nbb_D_VH.fa
null
sabdab_dataset/7nbb/structure/7nbb.pdb
sabdab_dataset/7nbb/structure/chothia/7nbb.pdb
false
false
test
7nbb
H
null
0
E | F | G
protein | protein | protein
NA | NA | NA
polyubiquitin-b | polyubiquitin-b | polyubiquitin-b
SIGNALING PROTEIN
08/10/22
Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with synthetic nanobody NbSL3
Homo sapiens; synthetic construct
synthetic construct
null
homo sapiens | homo sapiens | homo sapiens
Lange, S.M., Kulathu, Y.
1.55
X-RAY DIFFRACTION
0.212
0.175
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7nbb/annotation/7nbb_H_VH.ann
null
sabdab_dataset/7nbb/imgt/7nbb_H_H.ann
null
sabdab_dataset/7nbb/sequence/7nbb_raw.pdb
sabdab_dataset/7nbb/sequence/7nbb_H_VH.fa
null
sabdab_dataset/7nbb/structure/7nbb.pdb
sabdab_dataset/7nbb/structure/chothia/7nbb.pdb
false
false
validation
7nc0
H
L
0
null
null
null
null
IMMUNE SYSTEM
01/28/21
The structure of the humanised A33 Fab C226S variant, an immunotherapy candidate for colorectal cancer
HOMO SAPIENS
homo sapiens
homo sapiens
null
Tang, J., Zhang, C., Dalby, P., Kozielski, F.
2.2
X-RAY DIFFRACTION
0.257
0.215
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7nc0/abangle/7nc0.abangle
sabdab_dataset/7nc0/annotation/7nc0_H_VH.ann
sabdab_dataset/7nc0/annotation/7nc0_L_VL.ann
sabdab_dataset/7nc0/imgt/7nc0_H_H.ann
sabdab_dataset/7nc0/imgt/7nc0_L_L.ann
sabdab_dataset/7nc0/sequence/7nc0_raw.pdb
sabdab_dataset/7nc0/sequence/7nc0_H_VH.fa
sabdab_dataset/7nc0/sequence/7nc0_L_VL.fa
sabdab_dataset/7nc0/structure/7nc0.pdb
sabdab_dataset/7nc0/structure/chothia/7nc0.pdb
true
false
train
7ncs
H
L
0
A
protein
null
outer membrane protein assembly factor bama
MEMBRANE PROTEIN
01/29/21
Lateral-open conformation of the lid-locked BAM complex (BamA E435C S665C, BamBDCE) bound by a bactericidal Fab fragment
ESCHERICHIA COLI K-12; HOMO SAPIENS
homo sapiens
homo sapiens
escherichia coli k-12
Haysom, S.F., Machin, J.M.
7.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/7ncs/abangle/7ncs.abangle
sabdab_dataset/7ncs/annotation/7ncs_H_VH.ann
sabdab_dataset/7ncs/annotation/7ncs_L_VL.ann
sabdab_dataset/7ncs/imgt/7ncs_H_H.ann
sabdab_dataset/7ncs/imgt/7ncs_L_L.ann
sabdab_dataset/7ncs/sequence/7ncs_raw.pdb
sabdab_dataset/7ncs/sequence/7ncs_H_VH.fa
sabdab_dataset/7ncs/sequence/7ncs_L_VL.fa
sabdab_dataset/7ncs/structure/7ncs.pdb
sabdab_dataset/7ncs/structure/chothia/7ncs.pdb
false
false
train
7nd0
H
L
0
A
protein
null
outer membrane protein assembly factor bama
MEMBRANE PROTEIN
01/29/21
lateral-open conformation of the wild-type BAM complex (BamABCDE) bound to a bactericidal Fab fragment
ESCHERICHIA COLI K-12; HOMO SAPIENS
homo sapiens
homo sapiens
escherichia coli k-12
Iadanza, M.G., Haysom, S.H.
5.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/7nd0/abangle/7nd0.abangle
sabdab_dataset/7nd0/annotation/7nd0_H_VH.ann
sabdab_dataset/7nd0/annotation/7nd0_L_VL.ann
sabdab_dataset/7nd0/imgt/7nd0_H_H.ann
sabdab_dataset/7nd0/imgt/7nd0_L_L.ann
sabdab_dataset/7nd0/sequence/7nd0_raw.pdb
sabdab_dataset/7nd0/sequence/7nd0_H_VH.fa
sabdab_dataset/7nd0/sequence/7nd0_L_VL.fa
sabdab_dataset/7nd0/structure/7nd0.pdb
sabdab_dataset/7nd0/structure/chothia/7nd0.pdb
false
false
train
7nd3
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-40 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7nd3/abangle/7nd3.abangle
sabdab_dataset/7nd3/annotation/7nd3_H_VH.ann
sabdab_dataset/7nd3/annotation/7nd3_L_VL.ann
sabdab_dataset/7nd3/imgt/7nd3_H_H.ann
sabdab_dataset/7nd3/imgt/7nd3_L_L.ann
sabdab_dataset/7nd3/sequence/7nd3_raw.pdb
sabdab_dataset/7nd3/sequence/7nd3_H_VH.fa
sabdab_dataset/7nd3/sequence/7nd3_L_VL.fa
sabdab_dataset/7nd3/structure/7nd3.pdb
sabdab_dataset/7nd3/structure/chothia/7nd3.pdb
false
false
train
7nd4
D
E
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-88 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7nd4/abangle/7nd4.abangle
sabdab_dataset/7nd4/annotation/7nd4_D_VH.ann
sabdab_dataset/7nd4/annotation/7nd4_E_VL.ann
sabdab_dataset/7nd4/imgt/7nd4_D_H.ann
sabdab_dataset/7nd4/imgt/7nd4_E_L.ann
sabdab_dataset/7nd4/sequence/7nd4_raw.pdb
sabdab_dataset/7nd4/sequence/7nd4_D_VH.fa
sabdab_dataset/7nd4/sequence/7nd4_E_VL.fa
sabdab_dataset/7nd4/structure/7nd4.pdb
sabdab_dataset/7nd4/structure/chothia/7nd4.pdb
false
false
train
7nd4
F
G
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-88 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7nd4/abangle/7nd4.abangle
sabdab_dataset/7nd4/annotation/7nd4_F_VH.ann
sabdab_dataset/7nd4/annotation/7nd4_G_VL.ann
sabdab_dataset/7nd4/imgt/7nd4_F_H.ann
sabdab_dataset/7nd4/imgt/7nd4_G_L.ann
sabdab_dataset/7nd4/sequence/7nd4_raw.pdb
sabdab_dataset/7nd4/sequence/7nd4_F_VH.fa
sabdab_dataset/7nd4/sequence/7nd4_G_VL.fa
sabdab_dataset/7nd4/structure/7nd4.pdb
sabdab_dataset/7nd4/structure/chothia/7nd4.pdb
false
false
train
7nd4
H
L
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-88 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7nd4/abangle/7nd4.abangle
sabdab_dataset/7nd4/annotation/7nd4_H_VH.ann
sabdab_dataset/7nd4/annotation/7nd4_L_VL.ann
sabdab_dataset/7nd4/imgt/7nd4_H_H.ann
sabdab_dataset/7nd4/imgt/7nd4_L_L.ann
sabdab_dataset/7nd4/sequence/7nd4_raw.pdb
sabdab_dataset/7nd4/sequence/7nd4_H_VH.fa
sabdab_dataset/7nd4/sequence/7nd4_L_VL.fa
sabdab_dataset/7nd4/structure/7nd4.pdb
sabdab_dataset/7nd4/structure/chothia/7nd4.pdb
false
false
train
7nd5
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-150 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7nd5/abangle/7nd5.abangle
sabdab_dataset/7nd5/annotation/7nd5_H_VH.ann
sabdab_dataset/7nd5/annotation/7nd5_L_VL.ann
sabdab_dataset/7nd5/imgt/7nd5_H_H.ann
sabdab_dataset/7nd5/imgt/7nd5_L_L.ann
sabdab_dataset/7nd5/sequence/7nd5_raw.pdb
sabdab_dataset/7nd5/sequence/7nd5_H_VH.fa
sabdab_dataset/7nd5/sequence/7nd5_L_VL.fa
sabdab_dataset/7nd5/structure/7nd5.pdb
sabdab_dataset/7nd5/structure/chothia/7nd5.pdb
false
false
train
7nd6
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-40 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
7.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7nd6/abangle/7nd6.abangle
sabdab_dataset/7nd6/annotation/7nd6_H_VH.ann
sabdab_dataset/7nd6/annotation/7nd6_L_VL.ann
sabdab_dataset/7nd6/imgt/7nd6_H_H.ann
sabdab_dataset/7nd6/imgt/7nd6_L_L.ann
sabdab_dataset/7nd6/sequence/7nd6_raw.pdb
sabdab_dataset/7nd6/sequence/7nd6_H_VH.fa
sabdab_dataset/7nd6/sequence/7nd6_L_VL.fa
sabdab_dataset/7nd6/structure/7nd6.pdb
sabdab_dataset/7nd6/structure/chothia/7nd6.pdb
false
false
train
7nd7
F
G
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/7nd7/abangle/7nd7.abangle
sabdab_dataset/7nd7/annotation/7nd7_F_VH.ann
sabdab_dataset/7nd7/annotation/7nd7_G_VL.ann
sabdab_dataset/7nd7/imgt/7nd7_F_H.ann
sabdab_dataset/7nd7/imgt/7nd7_G_L.ann
sabdab_dataset/7nd7/sequence/7nd7_raw.pdb
sabdab_dataset/7nd7/sequence/7nd7_F_VH.fa
sabdab_dataset/7nd7/sequence/7nd7_G_VL.fa
sabdab_dataset/7nd7/structure/7nd7.pdb
sabdab_dataset/7nd7/structure/chothia/7nd7.pdb
false
false
train
7nd7
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/7nd7/abangle/7nd7.abangle
sabdab_dataset/7nd7/annotation/7nd7_H_VH.ann
sabdab_dataset/7nd7/annotation/7nd7_L_VL.ann
sabdab_dataset/7nd7/imgt/7nd7_H_H.ann
sabdab_dataset/7nd7/imgt/7nd7_L_L.ann
sabdab_dataset/7nd7/sequence/7nd7_raw.pdb
sabdab_dataset/7nd7/sequence/7nd7_H_VH.fa
sabdab_dataset/7nd7/sequence/7nd7_L_VL.fa
sabdab_dataset/7nd7/structure/7nd7.pdb
sabdab_dataset/7nd7/structure/chothia/7nd7.pdb
false
false
validation
7nd7
J
K
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/7nd7/abangle/7nd7.abangle
sabdab_dataset/7nd7/annotation/7nd7_J_VH.ann
sabdab_dataset/7nd7/annotation/7nd7_K_VL.ann
sabdab_dataset/7nd7/imgt/7nd7_J_H.ann
sabdab_dataset/7nd7/imgt/7nd7_K_L.ann
sabdab_dataset/7nd7/sequence/7nd7_raw.pdb
sabdab_dataset/7nd7/sequence/7nd7_J_VH.fa
sabdab_dataset/7nd7/sequence/7nd7_K_VL.fa
sabdab_dataset/7nd7/structure/7nd7.pdb
sabdab_dataset/7nd7/structure/chothia/7nd7.pdb
false
false
train
7nd8
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-384 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
3.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7nd8/abangle/7nd8.abangle
sabdab_dataset/7nd8/annotation/7nd8_H_VH.ann
sabdab_dataset/7nd8/annotation/7nd8_L_VL.ann
sabdab_dataset/7nd8/imgt/7nd8_H_H.ann
sabdab_dataset/7nd8/imgt/7nd8_L_L.ann
sabdab_dataset/7nd8/sequence/7nd8_raw.pdb
sabdab_dataset/7nd8/sequence/7nd8_H_VH.fa
sabdab_dataset/7nd8/sequence/7nd8_L_VL.fa
sabdab_dataset/7nd8/structure/7nd8.pdb
sabdab_dataset/7nd8/structure/chothia/7nd8.pdb
false
false
train
7nd9
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-253H55L Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
2.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7nd9/abangle/7nd9.abangle
sabdab_dataset/7nd9/annotation/7nd9_H_VH.ann
sabdab_dataset/7nd9/annotation/7nd9_L_VL.ann
sabdab_dataset/7nd9/imgt/7nd9_H_H.ann
sabdab_dataset/7nd9/imgt/7nd9_L_L.ann
sabdab_dataset/7nd9/sequence/7nd9_raw.pdb
sabdab_dataset/7nd9/sequence/7nd9_H_VH.fa
sabdab_dataset/7nd9/sequence/7nd9_L_VL.fa
sabdab_dataset/7nd9/structure/7nd9.pdb
sabdab_dataset/7nd9/structure/chothia/7nd9.pdb
false
false
validation
7nda
H
L
0
C | A
protein | protein
NA | NA
spike glycoprotein | spike glycoprotein
VIRAL PROTEIN
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein (all RBD down) in complex with COVOX-253H55L Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7nda/abangle/7nda.abangle
sabdab_dataset/7nda/annotation/7nda_H_VH.ann
sabdab_dataset/7nda/annotation/7nda_L_VL.ann
sabdab_dataset/7nda/imgt/7nda_H_H.ann
sabdab_dataset/7nda/imgt/7nda_L_L.ann
sabdab_dataset/7nda/sequence/7nda_raw.pdb
sabdab_dataset/7nda/sequence/7nda_H_VH.fa
sabdab_dataset/7nda/sequence/7nda_L_VL.fa
sabdab_dataset/7nda/structure/7nda.pdb
sabdab_dataset/7nda/structure/chothia/7nda.pdb
false
false
train
7ndb
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-253H165L Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
4.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7ndb/abangle/7ndb.abangle
sabdab_dataset/7ndb/annotation/7ndb_H_VH.ann
sabdab_dataset/7ndb/annotation/7ndb_L_VL.ann
sabdab_dataset/7ndb/imgt/7ndb_H_H.ann
sabdab_dataset/7ndb/imgt/7ndb_L_L.ann
sabdab_dataset/7ndb/sequence/7ndb_raw.pdb
sabdab_dataset/7ndb/sequence/7ndb_H_VH.fa
sabdab_dataset/7ndb/sequence/7ndb_L_VL.fa
sabdab_dataset/7ndb/structure/7ndb.pdb
sabdab_dataset/7ndb/structure/chothia/7ndb.pdb
false
false
train
7ndc
D
E
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein (all RBD down) in complex with COVOX-159
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
4.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7ndc/abangle/7ndc.abangle
sabdab_dataset/7ndc/annotation/7ndc_D_VH.ann
sabdab_dataset/7ndc/annotation/7ndc_E_VL.ann
sabdab_dataset/7ndc/imgt/7ndc_D_H.ann
sabdab_dataset/7ndc/imgt/7ndc_E_L.ann
sabdab_dataset/7ndc/sequence/7ndc_raw.pdb
sabdab_dataset/7ndc/sequence/7ndc_D_VH.fa
sabdab_dataset/7ndc/sequence/7ndc_E_VL.fa
sabdab_dataset/7ndc/structure/7ndc.pdb
sabdab_dataset/7ndc/structure/chothia/7ndc.pdb
false
false
train
7ndc
F
G
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein (all RBD down) in complex with COVOX-159
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
4.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7ndc/abangle/7ndc.abangle
sabdab_dataset/7ndc/annotation/7ndc_F_VH.ann
sabdab_dataset/7ndc/annotation/7ndc_G_VL.ann
sabdab_dataset/7ndc/imgt/7ndc_F_H.ann
sabdab_dataset/7ndc/imgt/7ndc_G_L.ann
sabdab_dataset/7ndc/sequence/7ndc_raw.pdb
sabdab_dataset/7ndc/sequence/7ndc_F_VH.fa
sabdab_dataset/7ndc/sequence/7ndc_G_VL.fa
sabdab_dataset/7ndc/structure/7ndc.pdb
sabdab_dataset/7ndc/structure/chothia/7ndc.pdb
false
false
train
7ndc
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein (all RBD down) in complex with COVOX-159
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
4.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7ndc/abangle/7ndc.abangle
sabdab_dataset/7ndc/annotation/7ndc_H_VH.ann
sabdab_dataset/7ndc/annotation/7ndc_L_VL.ann
sabdab_dataset/7ndc/imgt/7ndc_H_H.ann
sabdab_dataset/7ndc/imgt/7ndc_L_L.ann
sabdab_dataset/7ndc/sequence/7ndc_raw.pdb
sabdab_dataset/7ndc/sequence/7ndc_H_VH.fa
sabdab_dataset/7ndc/sequence/7ndc_L_VL.fa
sabdab_dataset/7ndc/structure/7ndc.pdb
sabdab_dataset/7ndc/structure/chothia/7ndc.pdb
false
false
train
7ndd
D
E
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-159
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
4.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7ndd/abangle/7ndd.abangle
sabdab_dataset/7ndd/annotation/7ndd_D_VH.ann
sabdab_dataset/7ndd/annotation/7ndd_E_VL.ann
sabdab_dataset/7ndd/imgt/7ndd_D_H.ann
sabdab_dataset/7ndd/imgt/7ndd_E_L.ann
sabdab_dataset/7ndd/sequence/7ndd_raw.pdb
sabdab_dataset/7ndd/sequence/7ndd_D_VH.fa
sabdab_dataset/7ndd/sequence/7ndd_E_VL.fa
sabdab_dataset/7ndd/structure/7ndd.pdb
sabdab_dataset/7ndd/structure/chothia/7ndd.pdb
false
false
train
7ndd
F
G
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-159
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
4.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7ndd/abangle/7ndd.abangle
sabdab_dataset/7ndd/annotation/7ndd_F_VH.ann
sabdab_dataset/7ndd/annotation/7ndd_G_VL.ann
sabdab_dataset/7ndd/imgt/7ndd_F_H.ann
sabdab_dataset/7ndd/imgt/7ndd_G_L.ann
sabdab_dataset/7ndd/sequence/7ndd_raw.pdb
sabdab_dataset/7ndd/sequence/7ndd_F_VH.fa
sabdab_dataset/7ndd/sequence/7ndd_G_VL.fa
sabdab_dataset/7ndd/structure/7ndd.pdb
sabdab_dataset/7ndd/structure/chothia/7ndd.pdb
false
false
train
7ndd
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN, IMMUNE SYSTEM
01/30/21
EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-159
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.
4.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7ndd/abangle/7ndd.abangle
sabdab_dataset/7ndd/annotation/7ndd_H_VH.ann
sabdab_dataset/7ndd/annotation/7ndd_L_VL.ann
sabdab_dataset/7ndd/imgt/7ndd_H_H.ann
sabdab_dataset/7ndd/imgt/7ndd_L_L.ann
sabdab_dataset/7ndd/sequence/7ndd_raw.pdb
sabdab_dataset/7ndd/sequence/7ndd_H_VH.fa
sabdab_dataset/7ndd/sequence/7ndd_L_VL.fa
sabdab_dataset/7ndd/structure/7ndd.pdb
sabdab_dataset/7ndd/structure/chothia/7ndd.pdb
false
false
train
7ndf
C
null
0
B
protein
null
lipid a abc transporter atp-binding protein/permease msba
PROTEIN BINDING
02/01/21
Crystal structure of nanobody Nb_MsbA#1 in complex with the nucleotide binding domain of MsbA
VICUGNA PACOS; ESCHERICHIA COLI
vicugna pacos
null
escherichia coli
Meier, G., Seeger, M.
2.1
X-RAY DIFFRACTION
0.244
0.205
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7ndf/annotation/7ndf_C_VH.ann
null
sabdab_dataset/7ndf/imgt/7ndf_C_H.ann
null
sabdab_dataset/7ndf/sequence/7ndf_raw.pdb
sabdab_dataset/7ndf/sequence/7ndf_C_VH.fa
null
sabdab_dataset/7ndf/structure/7ndf.pdb
sabdab_dataset/7ndf/structure/chothia/7ndf.pdb
true
true
train
7ndf
D
null
0
A
protein
null
lipid a abc transporter atp-binding protein/permease msba
PROTEIN BINDING
02/01/21
Crystal structure of nanobody Nb_MsbA#1 in complex with the nucleotide binding domain of MsbA
VICUGNA PACOS; ESCHERICHIA COLI
vicugna pacos
null
escherichia coli
Meier, G., Seeger, M.
2.1
X-RAY DIFFRACTION
0.244
0.205
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7ndf/annotation/7ndf_D_VH.ann
null
sabdab_dataset/7ndf/imgt/7ndf_D_H.ann
null
sabdab_dataset/7ndf/sequence/7ndf_raw.pdb
sabdab_dataset/7ndf/sequence/7ndf_D_VH.fa
null
sabdab_dataset/7ndf/structure/7ndf.pdb
sabdab_dataset/7ndf/structure/chothia/7ndf.pdb
true
false
test
7neg
H
L
0
E
protein
null
surface glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
02/04/21
Crystal structure of the N501Y mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 Fab
HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhou, D., Ren, J., Stuart, D.
2.19
X-RAY DIFFRACTION
0.223
0.195
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7neg/abangle/7neg.abangle
sabdab_dataset/7neg/annotation/7neg_H_VH.ann
sabdab_dataset/7neg/annotation/7neg_L_VL.ann
sabdab_dataset/7neg/imgt/7neg_H_H.ann
sabdab_dataset/7neg/imgt/7neg_L_L.ann
sabdab_dataset/7neg/sequence/7neg_raw.pdb
sabdab_dataset/7neg/sequence/7neg_H_VH.fa
sabdab_dataset/7neg/sequence/7neg_L_VL.fa
sabdab_dataset/7neg/structure/7neg.pdb
sabdab_dataset/7neg/structure/chothia/7neg.pdb
true
false
train
7neh
H
L
0
E
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
02/04/21
Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 Fab
HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhou, D., Ren, J., Stuart, D.
1.77
X-RAY DIFFRACTION
0.198
0.188
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7neh/abangle/7neh.abangle
sabdab_dataset/7neh/annotation/7neh_H_VH.ann
sabdab_dataset/7neh/annotation/7neh_L_VL.ann
sabdab_dataset/7neh/imgt/7neh_H_H.ann
sabdab_dataset/7neh/imgt/7neh_L_L.ann
sabdab_dataset/7neh/sequence/7neh_raw.pdb
sabdab_dataset/7neh/sequence/7neh_H_VH.fa
sabdab_dataset/7neh/sequence/7neh_L_VL.fa
sabdab_dataset/7neh/structure/7neh.pdb
sabdab_dataset/7neh/structure/chothia/7neh.pdb
false
false
validation
7neq
D
C
0
B
protein
null
atp-binding cassette sub-family g member 2
MEMBRANE PROTEIN
02/04/21
Structure of tariquidar-bound ABCG2
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Kowal, J., Locher, K.
3.12
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV13
Kappa
null
null
null
null
null
sabdab_dataset/7neq/abangle/7neq.abangle
sabdab_dataset/7neq/annotation/7neq_D_VH.ann
sabdab_dataset/7neq/annotation/7neq_C_VL.ann
sabdab_dataset/7neq/imgt/7neq_D_H.ann
sabdab_dataset/7neq/imgt/7neq_C_L.ann
sabdab_dataset/7neq/sequence/7neq_raw.pdb
sabdab_dataset/7neq/sequence/7neq_D_VH.fa
sabdab_dataset/7neq/sequence/7neq_C_VL.fa
sabdab_dataset/7neq/structure/7neq.pdb
sabdab_dataset/7neq/structure/chothia/7neq.pdb
false
false
test
7neq
F
E
0
A
protein
null
atp-binding cassette sub-family g member 2
MEMBRANE PROTEIN
02/04/21
Structure of tariquidar-bound ABCG2
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Kowal, J., Locher, K.
3.12
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV13
Kappa
null
null
null
null
null
sabdab_dataset/7neq/abangle/7neq.abangle
sabdab_dataset/7neq/annotation/7neq_F_VH.ann
sabdab_dataset/7neq/annotation/7neq_E_VL.ann
sabdab_dataset/7neq/imgt/7neq_F_H.ann
sabdab_dataset/7neq/imgt/7neq_E_L.ann
sabdab_dataset/7neq/sequence/7neq_raw.pdb
sabdab_dataset/7neq/sequence/7neq_F_VH.fa
sabdab_dataset/7neq/sequence/7neq_E_VL.fa
sabdab_dataset/7neq/structure/7neq.pdb
sabdab_dataset/7neq/structure/chothia/7neq.pdb
false
false
train
7nez
D
C
0
B
protein
null
atp-binding cassette sub-family g member 2
MEMBRANE PROTEIN
02/05/21
Structure of topotecan-bound ABCG2
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Kowal, J., Locher, K., Ni, D., Stahlberg, H.
3.39
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV13
Kappa
null
null
null
null
null
sabdab_dataset/7nez/abangle/7nez.abangle
sabdab_dataset/7nez/annotation/7nez_D_VH.ann
sabdab_dataset/7nez/annotation/7nez_C_VL.ann
sabdab_dataset/7nez/imgt/7nez_D_H.ann
sabdab_dataset/7nez/imgt/7nez_C_L.ann
sabdab_dataset/7nez/sequence/7nez_raw.pdb
sabdab_dataset/7nez/sequence/7nez_D_VH.fa
sabdab_dataset/7nez/sequence/7nez_C_VL.fa
sabdab_dataset/7nez/structure/7nez.pdb
sabdab_dataset/7nez/structure/chothia/7nez.pdb
false
false
train
7nez
F
E
0
A
protein
null
atp-binding cassette sub-family g member 2
MEMBRANE PROTEIN
02/05/21
Structure of topotecan-bound ABCG2
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Kowal, J., Locher, K., Ni, D., Stahlberg, H.
3.39
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV13
Kappa
null
null
null
null
null
sabdab_dataset/7nez/abangle/7nez.abangle
sabdab_dataset/7nez/annotation/7nez_F_VH.ann
sabdab_dataset/7nez/annotation/7nez_E_VL.ann
sabdab_dataset/7nez/imgt/7nez_F_H.ann
sabdab_dataset/7nez/imgt/7nez_E_L.ann
sabdab_dataset/7nez/sequence/7nez_raw.pdb
sabdab_dataset/7nez/sequence/7nez_F_VH.fa
sabdab_dataset/7nez/sequence/7nez_E_VL.fa
sabdab_dataset/7nez/structure/7nez.pdb
sabdab_dataset/7nez/structure/chothia/7nez.pdb
false
false
train
7nfa
C
A
0
null
null
null
null
IMMUNE SYSTEM
02/05/21
The structure of the humanised A33 Fab C226S variant, an immunotherapy candidate for colorectal cancer
HOMO SAPIENS
homo sapiens
homo sapiens
null
Tang, J., Zhang, C., Dalby, P., Kozielski, F.
2.3
X-RAY DIFFRACTION
0.260
0.193
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7nfa/abangle/7nfa.abangle
sabdab_dataset/7nfa/annotation/7nfa_C_VH.ann
sabdab_dataset/7nfa/annotation/7nfa_A_VL.ann
sabdab_dataset/7nfa/imgt/7nfa_C_H.ann
sabdab_dataset/7nfa/imgt/7nfa_A_L.ann
sabdab_dataset/7nfa/sequence/7nfa_raw.pdb
sabdab_dataset/7nfa/sequence/7nfa_C_VH.fa
sabdab_dataset/7nfa/sequence/7nfa_A_VL.fa
sabdab_dataset/7nfa/structure/7nfa.pdb
sabdab_dataset/7nfa/structure/chothia/7nfa.pdb
false
false
validation
7nfa
D
B
0
null
null
null
null
IMMUNE SYSTEM
02/05/21
The structure of the humanised A33 Fab C226S variant, an immunotherapy candidate for colorectal cancer
HOMO SAPIENS
homo sapiens
homo sapiens
null
Tang, J., Zhang, C., Dalby, P., Kozielski, F.
2.3
X-RAY DIFFRACTION
0.260
0.193
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7nfa/abangle/7nfa.abangle
sabdab_dataset/7nfa/annotation/7nfa_D_VH.ann
sabdab_dataset/7nfa/annotation/7nfa_B_VL.ann
sabdab_dataset/7nfa/imgt/7nfa_D_H.ann
sabdab_dataset/7nfa/imgt/7nfa_B_L.ann
sabdab_dataset/7nfa/sequence/7nfa_raw.pdb
sabdab_dataset/7nfa/sequence/7nfa_D_VH.fa
sabdab_dataset/7nfa/sequence/7nfa_B_VL.fa
sabdab_dataset/7nfa/structure/7nfa.pdb
sabdab_dataset/7nfa/structure/chothia/7nfa.pdb
false
false
train
7nfd
D
C
0
B
protein
null
atp-binding cassette sub-family g member 2
MEMBRANE PROTEIN
02/06/21
Structure of mitoxantrone-bound ABCG2
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Kowal, J., Locher, K., Ni, D., Stahlberg, H.
3.51
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV13
Kappa
null
null
null
null
null
sabdab_dataset/7nfd/abangle/7nfd.abangle
sabdab_dataset/7nfd/annotation/7nfd_D_VH.ann
sabdab_dataset/7nfd/annotation/7nfd_C_VL.ann
sabdab_dataset/7nfd/imgt/7nfd_D_H.ann
sabdab_dataset/7nfd/imgt/7nfd_C_L.ann
sabdab_dataset/7nfd/sequence/7nfd_raw.pdb
sabdab_dataset/7nfd/sequence/7nfd_D_VH.fa
sabdab_dataset/7nfd/sequence/7nfd_C_VL.fa
sabdab_dataset/7nfd/structure/7nfd.pdb
sabdab_dataset/7nfd/structure/chothia/7nfd.pdb
false
false
train
7nfd
F
E
0
A
protein
null
atp-binding cassette sub-family g member 2
MEMBRANE PROTEIN
02/06/21
Structure of mitoxantrone-bound ABCG2
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Kowal, J., Locher, K., Ni, D., Stahlberg, H.
3.51
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV13
Kappa
null
null
null
null
null
sabdab_dataset/7nfd/abangle/7nfd.abangle
sabdab_dataset/7nfd/annotation/7nfd_F_VH.ann
sabdab_dataset/7nfd/annotation/7nfd_E_VL.ann
sabdab_dataset/7nfd/imgt/7nfd_F_H.ann
sabdab_dataset/7nfd/imgt/7nfd_E_L.ann
sabdab_dataset/7nfd/sequence/7nfd_raw.pdb
sabdab_dataset/7nfd/sequence/7nfd_F_VH.fa
sabdab_dataset/7nfd/sequence/7nfd_E_VL.fa
sabdab_dataset/7nfd/structure/7nfd.pdb
sabdab_dataset/7nfd/structure/chothia/7nfd.pdb
false
false
train
7nfq
C
null
0
A
protein
null
polymerase basic protein 2
VIRAL PROTEIN
02/07/21
Fujian capmidlink domain in complex with Nb8193
INFLUENZA A VIRUS (A/DUCK/FUJIAN/13/2002(H5N1)); CAMELIDAE MIXED LIBRARY
camelidae mixed library
null
influenza a virus (a/duck/fujian/13/2002(h5n1))
Keown, J.R., Grimes, J.M., Fodor, E.
1.68
X-RAY DIFFRACTION
0.205
0.167
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7nfq/annotation/7nfq_C_VH.ann
null
sabdab_dataset/7nfq/imgt/7nfq_C_H.ann
null
sabdab_dataset/7nfq/sequence/7nfq_raw.pdb
sabdab_dataset/7nfq/sequence/7nfq_C_VH.fa
null
sabdab_dataset/7nfq/structure/7nfq.pdb
sabdab_dataset/7nfq/structure/chothia/7nfq.pdb
true
true
test
7nfq
D
null
0
B
protein
null
polymerase basic protein 2
VIRAL PROTEIN
02/07/21
Fujian capmidlink domain in complex with Nb8193
INFLUENZA A VIRUS (A/DUCK/FUJIAN/13/2002(H5N1)); CAMELIDAE MIXED LIBRARY
camelidae mixed library
null
influenza a virus (a/duck/fujian/13/2002(h5n1))
Keown, J.R., Grimes, J.M., Fodor, E.
1.68
X-RAY DIFFRACTION
0.205
0.167
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7nfq/annotation/7nfq_D_VH.ann
null
sabdab_dataset/7nfq/imgt/7nfq_D_H.ann
null
sabdab_dataset/7nfq/sequence/7nfq_raw.pdb
sabdab_dataset/7nfq/sequence/7nfq_D_VH.fa
null
sabdab_dataset/7nfq/structure/7nfq.pdb
sabdab_dataset/7nfq/structure/chothia/7nfq.pdb
true
false
train
7nfr
B
null
0
A
protein
null
polymerase basic protein 2
VIRAL PROTEIN
02/07/21
Fujian capmidlink domain in complex with Nb8194
INFLUENZA A VIRUS (A/DUCK/FUJIAN/13/2002(H5N1)); HOMO SAPIENS
homo sapiens
null
influenza a virus (a/duck/fujian/13/2002(h5n1))
Keown, J.R., Grimes, J.M., Fodor, E.
1.88
X-RAY DIFFRACTION
0.245
0.195
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7nfr/annotation/7nfr_B_VH.ann
null
sabdab_dataset/7nfr/imgt/7nfr_B_H.ann
null
sabdab_dataset/7nfr/sequence/7nfr_raw.pdb
sabdab_dataset/7nfr/sequence/7nfr_B_VH.fa
null
sabdab_dataset/7nfr/structure/7nfr.pdb
sabdab_dataset/7nfr/structure/chothia/7nfr.pdb
true
true
validation
7nft
C
null
0
A
protein
null
polymerase basic protein 2
VIRAL PROTEIN
02/07/21
Fujian capbinding domain in complex with Nb8208
INFLUENZA A VIRUS (A/DUCK/FUJIAN/13/2002(H5N1)); HOMO SAPIENS
homo sapiens
null
influenza a virus (a/duck/fujian/13/2002(h5n1))
Keown, J.R., Grimes, J.M., Fodor, E.
3.14
X-RAY DIFFRACTION
0.291
0.244
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7nft/annotation/7nft_C_VH.ann
null
sabdab_dataset/7nft/imgt/7nft_C_H.ann
null
sabdab_dataset/7nft/sequence/7nft_raw.pdb
sabdab_dataset/7nft/sequence/7nft_C_VH.fa
null
sabdab_dataset/7nft/structure/7nft.pdb
sabdab_dataset/7nft/structure/chothia/7nft.pdb
true
true
train
7nft
D
null
0
B
protein
null
polymerase basic protein 2
VIRAL PROTEIN
02/07/21
Fujian capbinding domain in complex with Nb8208
INFLUENZA A VIRUS (A/DUCK/FUJIAN/13/2002(H5N1)); HOMO SAPIENS
homo sapiens
null
influenza a virus (a/duck/fujian/13/2002(h5n1))
Keown, J.R., Grimes, J.M., Fodor, E.
3.14
X-RAY DIFFRACTION
0.291
0.244
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7nft/annotation/7nft_D_VH.ann
null
sabdab_dataset/7nft/imgt/7nft_D_H.ann
null
sabdab_dataset/7nft/sequence/7nft_raw.pdb
sabdab_dataset/7nft/sequence/7nft_D_VH.fa
null
sabdab_dataset/7nft/structure/7nft.pdb
sabdab_dataset/7nft/structure/chothia/7nft.pdb
true
false
train
7ngh
D
null
0
B
protein
null
proton/glutamate symporter, sdf family
TRANSPORT PROTEIN
02/09/21
Structure of glutamate transporter homologue in complex with Sybody
THERMOCOCCUS KODAKARENSIS KOD1; SYNTHETIC CONSTRUCT
synthetic construct
null
thermococcus kodakarensis kod1
Arkhipova, V., Slotboom, D.J., Guskov, A.
3.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7ngh/annotation/7ngh_D_VH.ann
null
sabdab_dataset/7ngh/imgt/7ngh_D_H.ann
null
sabdab_dataset/7ngh/sequence/7ngh_raw.pdb
sabdab_dataset/7ngh/sequence/7ngh_D_VH.fa
null
sabdab_dataset/7ngh/structure/7ngh.pdb
sabdab_dataset/7ngh/structure/chothia/7ngh.pdb
false
false
validation
7nik
F
null
0
A | B
protein | protein
NA | NA
polymerase acidic protein | rna-directed rna polymerase catalytic subunit
VIRAL PROTEIN
02/12/21
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8189 core
INFLUENZA A VIRUS (STRAIN A/BREVIG MISSION/1/1918 H1N1); STAPHYLOCOCCUS AUREUS; CAMELIDAE MIXED LIBRARY; SYNTHETIC CONSTRUCT
camelidae mixed library
null
influenza a virus (strain a/brevigmission/1/1918 h1n1) | influenza a virus (strain a/brevigmission/1/1918 h1n1)
Keown, J.R., Carrique, L., Fodor, E., Grimes, J.M.
6.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7nik/annotation/7nik_F_VH.ann
null
sabdab_dataset/7nik/imgt/7nik_F_H.ann
null
sabdab_dataset/7nik/sequence/7nik_raw.pdb
sabdab_dataset/7nik/sequence/7nik_F_VH.fa
null
sabdab_dataset/7nik/structure/7nik.pdb
sabdab_dataset/7nik/structure/chothia/7nik.pdb
false
false
train
7nil
F
null
0
A
protein
null
polymerase acidic protein
VIRAL PROTEIN
02/12/21
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8190 core
INFLUENZA A VIRUS (A/BREVIG MISSION/1/1918(H1N1)); STAPHYLOCOCCUS AUREUS; CAMELIDAE MIXED LIBRARY; SYNTHETIC CONSTRUCT
camelidae mixed library
null
influenza a virus (a/brevigmission/1/1918(h1n1))
Keown, J.R., Carrique, L., Fodor, E., Grimes, J.M.
5.01
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7nil/annotation/7nil_F_VH.ann
null
sabdab_dataset/7nil/imgt/7nil_F_H.ann
null
sabdab_dataset/7nil/sequence/7nil_raw.pdb
sabdab_dataset/7nil/sequence/7nil_F_VH.fa
null
sabdab_dataset/7nil/structure/7nil.pdb
sabdab_dataset/7nil/structure/chothia/7nil.pdb
false
false
test
7nir
F
null
0
A | B
protein | protein
NA | NA
polymerase acidic protein | rna-directed rna polymerase catalytic subunit
VIRAL PROTEIN
02/13/21
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8191 core
INFLUENZA A VIRUS (STRAIN A/BREVIG MISSION/1/1918 H1N1); STAPHYLOCOCCUS AUREUS; CAMELIDAE MIXED LIBRARY; SYNTHETIC CONSTRUCT
camelidae mixed library
null
influenza a virus (strain a/brevigmission/1/1918 h1n1) | influenza a virus (strain a/brevigmission/1/1918 h1n1)
Keown, J.R., Carrique, L., Fodor, E., Grimes, J.M.
6.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7nir/annotation/7nir_F_VH.ann
null
sabdab_dataset/7nir/imgt/7nir_F_H.ann
null
sabdab_dataset/7nir/sequence/7nir_raw.pdb
sabdab_dataset/7nir/sequence/7nir_F_VH.fa
null
sabdab_dataset/7nir/structure/7nir.pdb
sabdab_dataset/7nir/structure/chothia/7nir.pdb
false
false
test
7nis
F
null
0
null
null
null
null
VIRAL PROTEIN
02/13/21
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8192 core
CAMELIDAE MIXED LIBRARY; INFLUENZA A VIRUS (STRAIN A/BREVIG MISSION/1/1918 H1N1); STAPHYLOCOCCUS AUREUS; SYNTHETIC CONSTRUCT
camelidae mixed library
null
null
Keown, J.R., Carrique, L., Fodor, E., Grimes, J.M.
5.96
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7nis/annotation/7nis_F_VH.ann
null
sabdab_dataset/7nis/imgt/7nis_F_H.ann
null
sabdab_dataset/7nis/sequence/7nis_raw.pdb
sabdab_dataset/7nis/sequence/7nis_F_VH.fa
null
sabdab_dataset/7nis/structure/7nis.pdb
sabdab_dataset/7nis/structure/chothia/7nis.pdb
false
false
train
7niu
C
B
0
A
protein
null
isoform 2 of phosphatidylcholine translocator abcb4
PROTEIN TRANSPORT
02/14/21
Nanodisc reconstituted human ABCB4 in complex with 4B1-Fab and QA2-Fab (apo-inward-open conformation)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Nosol, K., Locher, K.P.
4.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7niu/abangle/7niu.abangle
sabdab_dataset/7niu/annotation/7niu_C_VH.ann
sabdab_dataset/7niu/annotation/7niu_B_VL.ann
sabdab_dataset/7niu/imgt/7niu_C_H.ann
sabdab_dataset/7niu/imgt/7niu_B_L.ann
sabdab_dataset/7niu/sequence/7niu_raw.pdb
sabdab_dataset/7niu/sequence/7niu_C_VH.fa
sabdab_dataset/7niu/sequence/7niu_B_VL.fa
sabdab_dataset/7niu/structure/7niu.pdb
sabdab_dataset/7niu/structure/chothia/7niu.pdb
false
false
train
7niu
E
D
0
A
protein
null
isoform 2 of phosphatidylcholine translocator abcb4
PROTEIN TRANSPORT
02/14/21
Nanodisc reconstituted human ABCB4 in complex with 4B1-Fab and QA2-Fab (apo-inward-open conformation)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Nosol, K., Locher, K.P.
4.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7niu/abangle/7niu.abangle
sabdab_dataset/7niu/annotation/7niu_E_VH.ann
sabdab_dataset/7niu/annotation/7niu_D_VL.ann
sabdab_dataset/7niu/imgt/7niu_E_H.ann
sabdab_dataset/7niu/imgt/7niu_D_L.ann
sabdab_dataset/7niu/sequence/7niu_raw.pdb
sabdab_dataset/7niu/sequence/7niu_E_VH.fa
sabdab_dataset/7niu/sequence/7niu_D_VL.fa
sabdab_dataset/7niu/structure/7niu.pdb
sabdab_dataset/7niu/structure/chothia/7niu.pdb
false
false
validation
7niv
C
B
0
A
protein
null
isoform 2 of phosphatidylcholine translocator abcb4
PROTEIN TRANSPORT
02/14/21
Nanodisc reconstituted human ABCB4 in complex with 4B1-Fab and QA2-Fab (phosphatidylcholine-bound, occluded conformation)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Nosol, K., Locher, K.P.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7niv/abangle/7niv.abangle
sabdab_dataset/7niv/annotation/7niv_C_VH.ann
sabdab_dataset/7niv/annotation/7niv_B_VL.ann
sabdab_dataset/7niv/imgt/7niv_C_H.ann
sabdab_dataset/7niv/imgt/7niv_B_L.ann
sabdab_dataset/7niv/sequence/7niv_raw.pdb
sabdab_dataset/7niv/sequence/7niv_C_VH.fa
sabdab_dataset/7niv/sequence/7niv_B_VL.fa
sabdab_dataset/7niv/structure/7niv.pdb
sabdab_dataset/7niv/structure/chothia/7niv.pdb
false
false
train
7niv
E
D
0
A
protein
null
isoform 2 of phosphatidylcholine translocator abcb4
PROTEIN TRANSPORT
02/14/21
Nanodisc reconstituted human ABCB4 in complex with 4B1-Fab and QA2-Fab (phosphatidylcholine-bound, occluded conformation)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Nosol, K., Locher, K.P.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7niv/abangle/7niv.abangle
sabdab_dataset/7niv/annotation/7niv_E_VH.ann
sabdab_dataset/7niv/annotation/7niv_D_VL.ann
sabdab_dataset/7niv/imgt/7niv_E_H.ann
sabdab_dataset/7niv/imgt/7niv_D_L.ann
sabdab_dataset/7niv/sequence/7niv_raw.pdb
sabdab_dataset/7niv/sequence/7niv_E_VH.fa
sabdab_dataset/7niv/sequence/7niv_D_VL.fa
sabdab_dataset/7niv/structure/7niv.pdb
sabdab_dataset/7niv/structure/chothia/7niv.pdb
false
false
train
7niw
C
B
0
A
protein
null
phosphatidylcholine translocator abcb4
PROTEIN TRANSPORT
02/14/21
Nanodisc reconstituted human ABCB4 in complex with 4B1-Fab (posaconazole-bound, inward-open conformation)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Nosol, K., Locher, K.P.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7niw/abangle/7niw.abangle
sabdab_dataset/7niw/annotation/7niw_C_VH.ann
sabdab_dataset/7niw/annotation/7niw_B_VL.ann
sabdab_dataset/7niw/imgt/7niw_C_H.ann
sabdab_dataset/7niw/imgt/7niw_B_L.ann
sabdab_dataset/7niw/sequence/7niw_raw.pdb
sabdab_dataset/7niw/sequence/7niw_C_VH.fa
sabdab_dataset/7niw/sequence/7niw_B_VL.fa
sabdab_dataset/7niw/structure/7niw.pdb
sabdab_dataset/7niw/structure/chothia/7niw.pdb
false
false
train