pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
365 values
r_factor
stringclasses
358 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
abangle
stringlengths
40
40
annotation_H
stringlengths
44
44
annotation_L
stringlengths
44
44
imgt_H
stringlengths
37
37
imgt_L
stringlengths
37
37
sequence_raw
stringlengths
41
41
sequence_H
stringlengths
41
41
sequence_L
stringlengths
41
41
structure
stringlengths
38
38
structure_chothia
stringlengths
46
46
in_nr_set
bool
2 classes
curated_quality_dataset
bool
2 classes
split
stringclasses
3 values
7xsc
A
B
0
E
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
05/24/23
Crystal structure of SARS-CoV-2 spike receptor binding domain bound with P5S-2B10
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, X., Wang, Z., Lin, Z.
2.88
X-RAY DIFFRACTION
0.250
0.2
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7xsc/abangle/7xsc.abangle
sabdab_dataset/7xsc/annotation/7xsc_A_VH.ann
sabdab_dataset/7xsc/annotation/7xsc_B_VL.ann
sabdab_dataset/7xsc/imgt/7xsc_A_H.ann
sabdab_dataset/7xsc/imgt/7xsc_B_L.ann
sabdab_dataset/7xsc/sequence/7xsc_raw.pdb
sabdab_dataset/7xsc/sequence/7xsc_A_VH.fa
sabdab_dataset/7xsc/sequence/7xsc_B_VL.fa
sabdab_dataset/7xsc/structure/7xsc.pdb
sabdab_dataset/7xsc/structure/chothia/7xsc.pdb
true
false
train
7xsc
D
H
0
F
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
05/24/23
Crystal structure of SARS-CoV-2 spike receptor binding domain bound with P5S-2B10
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, X., Wang, Z., Lin, Z.
2.88
X-RAY DIFFRACTION
0.250
0.2
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7xsc/abangle/7xsc.abangle
sabdab_dataset/7xsc/annotation/7xsc_D_VH.ann
sabdab_dataset/7xsc/annotation/7xsc_H_VL.ann
sabdab_dataset/7xsc/imgt/7xsc_D_H.ann
sabdab_dataset/7xsc/imgt/7xsc_H_L.ann
sabdab_dataset/7xsc/sequence/7xsc_raw.pdb
sabdab_dataset/7xsc/sequence/7xsc_D_VH.fa
sabdab_dataset/7xsc/sequence/7xsc_H_VL.fa
sabdab_dataset/7xsc/structure/7xsc.pdb
sabdab_dataset/7xsc/structure/chothia/7xsc.pdb
true
false
train
7xst
D
E
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
11/23/22
Cryo-EM structure of SARS-CoV-2 Omicron spike glycoprotein in complex with three F61 Fab and three D2 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, X., Li, X.
3.04
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7xst/abangle/7xst.abangle
sabdab_dataset/7xst/annotation/7xst_D_VH.ann
sabdab_dataset/7xst/annotation/7xst_E_VL.ann
sabdab_dataset/7xst/imgt/7xst_D_H.ann
sabdab_dataset/7xst/imgt/7xst_E_L.ann
sabdab_dataset/7xst/sequence/7xst_raw.pdb
sabdab_dataset/7xst/sequence/7xst_D_VH.fa
sabdab_dataset/7xst/sequence/7xst_E_VL.fa
sabdab_dataset/7xst/structure/7xst.pdb
sabdab_dataset/7xst/structure/chothia/7xst.pdb
false
false
train
7xst
F
G
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
11/23/22
Cryo-EM structure of SARS-CoV-2 Omicron spike glycoprotein in complex with three F61 Fab and three D2 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, X., Li, X.
3.04
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7xst/abangle/7xst.abangle
sabdab_dataset/7xst/annotation/7xst_F_VH.ann
sabdab_dataset/7xst/annotation/7xst_G_VL.ann
sabdab_dataset/7xst/imgt/7xst_F_H.ann
sabdab_dataset/7xst/imgt/7xst_G_L.ann
sabdab_dataset/7xst/sequence/7xst_raw.pdb
sabdab_dataset/7xst/sequence/7xst_F_VH.fa
sabdab_dataset/7xst/sequence/7xst_G_VL.fa
sabdab_dataset/7xst/structure/7xst.pdb
sabdab_dataset/7xst/structure/chothia/7xst.pdb
false
false
validation
7xst
H
I
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
11/23/22
Cryo-EM structure of SARS-CoV-2 Omicron spike glycoprotein in complex with three F61 Fab and three D2 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, X., Li, X.
3.04
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7xst/abangle/7xst.abangle
sabdab_dataset/7xst/annotation/7xst_H_VH.ann
sabdab_dataset/7xst/annotation/7xst_I_VL.ann
sabdab_dataset/7xst/imgt/7xst_H_H.ann
sabdab_dataset/7xst/imgt/7xst_I_L.ann
sabdab_dataset/7xst/sequence/7xst_raw.pdb
sabdab_dataset/7xst/sequence/7xst_H_VH.fa
sabdab_dataset/7xst/sequence/7xst_I_VL.fa
sabdab_dataset/7xst/structure/7xst.pdb
sabdab_dataset/7xst/structure/chothia/7xst.pdb
false
false
train
7xst
J
K
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
11/23/22
Cryo-EM structure of SARS-CoV-2 Omicron spike glycoprotein in complex with three F61 Fab and three D2 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, X., Li, X.
3.04
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7xst/abangle/7xst.abangle
sabdab_dataset/7xst/annotation/7xst_J_VH.ann
sabdab_dataset/7xst/annotation/7xst_K_VL.ann
sabdab_dataset/7xst/imgt/7xst_J_H.ann
sabdab_dataset/7xst/imgt/7xst_K_L.ann
sabdab_dataset/7xst/sequence/7xst_raw.pdb
sabdab_dataset/7xst/sequence/7xst_J_VH.fa
sabdab_dataset/7xst/sequence/7xst_K_VL.fa
sabdab_dataset/7xst/structure/7xst.pdb
sabdab_dataset/7xst/structure/chothia/7xst.pdb
false
false
train
7xst
L
M
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
11/23/22
Cryo-EM structure of SARS-CoV-2 Omicron spike glycoprotein in complex with three F61 Fab and three D2 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, X., Li, X.
3.04
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7xst/abangle/7xst.abangle
sabdab_dataset/7xst/annotation/7xst_L_VH.ann
sabdab_dataset/7xst/annotation/7xst_M_VL.ann
sabdab_dataset/7xst/imgt/7xst_L_H.ann
sabdab_dataset/7xst/imgt/7xst_M_L.ann
sabdab_dataset/7xst/sequence/7xst_raw.pdb
sabdab_dataset/7xst/sequence/7xst_L_VH.fa
sabdab_dataset/7xst/sequence/7xst_M_VL.fa
sabdab_dataset/7xst/structure/7xst.pdb
sabdab_dataset/7xst/structure/chothia/7xst.pdb
false
false
train
7xst
N
O
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
11/23/22
Cryo-EM structure of SARS-CoV-2 Omicron spike glycoprotein in complex with three F61 Fab and three D2 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, X., Li, X.
3.04
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7xst/abangle/7xst.abangle
sabdab_dataset/7xst/annotation/7xst_N_VH.ann
sabdab_dataset/7xst/annotation/7xst_O_VL.ann
sabdab_dataset/7xst/imgt/7xst_N_H.ann
sabdab_dataset/7xst/imgt/7xst_O_L.ann
sabdab_dataset/7xst/sequence/7xst_raw.pdb
sabdab_dataset/7xst/sequence/7xst_N_VH.fa
sabdab_dataset/7xst/sequence/7xst_O_VL.fa
sabdab_dataset/7xst/structure/7xst.pdb
sabdab_dataset/7xst/structure/chothia/7xst.pdb
false
false
validation
7xsw
A
B
0
C
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
01/11/23
Structure of SARS-CoV-2 antibody S309 with GX/P2V/2017 RBD
Homo sapiens; Pangolin coronavirus
homo sapiens
homo sapiens
pangolin coronavirus
Jia, Y.F., Chai, Y., Wang, Q.H., Gao, G.F.
3.3
X-RAY DIFFRACTION
0.322
0.277
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7xsw/abangle/7xsw.abangle
sabdab_dataset/7xsw/annotation/7xsw_A_VH.ann
sabdab_dataset/7xsw/annotation/7xsw_B_VL.ann
sabdab_dataset/7xsw/imgt/7xsw_A_H.ann
sabdab_dataset/7xsw/imgt/7xsw_B_L.ann
sabdab_dataset/7xsw/sequence/7xsw_raw.pdb
sabdab_dataset/7xsw/sequence/7xsw_A_VH.fa
sabdab_dataset/7xsw/sequence/7xsw_B_VL.fa
sabdab_dataset/7xsw/structure/7xsw.pdb
sabdab_dataset/7xsw/structure/chothia/7xsw.pdb
false
false
train
7xsw
H
L
0
R
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
01/11/23
Structure of SARS-CoV-2 antibody S309 with GX/P2V/2017 RBD
Homo sapiens; Pangolin coronavirus
homo sapiens
homo sapiens
pangolin coronavirus
Jia, Y.F., Chai, Y., Wang, Q.H., Gao, G.F.
3.3
X-RAY DIFFRACTION
0.322
0.277
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7xsw/abangle/7xsw.abangle
sabdab_dataset/7xsw/annotation/7xsw_H_VH.ann
sabdab_dataset/7xsw/annotation/7xsw_L_VL.ann
sabdab_dataset/7xsw/imgt/7xsw_H_H.ann
sabdab_dataset/7xsw/imgt/7xsw_L_L.ann
sabdab_dataset/7xsw/sequence/7xsw_raw.pdb
sabdab_dataset/7xsw/sequence/7xsw_H_VH.fa
sabdab_dataset/7xsw/sequence/7xsw_L_VL.fa
sabdab_dataset/7xsw/structure/7xsw.pdb
sabdab_dataset/7xsw/structure/chothia/7xsw.pdb
false
false
train
7xt8
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/27/22
Serotonin 4 (5-HT4) receptor-Gs-Nb35 complex
Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens
Huang, S., Xu, P., Shen, D.D., Simon, I.A., Mao, C., Tan, Y., Zhang, H., Harpsoe, K., Li, H., Zhang, Y., You, C., Yu, X., Jiang, Y., Zhang, Y., Gloriam, D.E., Xu, H.E.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7xt8/annotation/7xt8_N_VH.ann
null
sabdab_dataset/7xt8/imgt/7xt8_N_H.ann
null
sabdab_dataset/7xt8/sequence/7xt8_raw.pdb
sabdab_dataset/7xt8/sequence/7xt8_N_VH.fa
null
sabdab_dataset/7xt8/structure/7xt8.pdb
sabdab_dataset/7xt8/structure/chothia/7xt8.pdb
false
false
test
7xta
E
e
0
A | B | G
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2
MEMBRANE PROTEIN
07/27/22
Serotonin 4 (5-HT4) receptor-Gi-scFv16 complex
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens | homo sapiens
Huang, S., Xu, P., Shen, D.D., Simon, I.A., Mao, C., Tan, Y., Zhang, H., Harpsoe, K., Li, H., Zhang, Y., You, C., Yu, X., Jiang, Y., Zhang, Y., Gloriam, D.E., Xu, H.E.
3.2
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7xta/abangle/7xta.abangle
sabdab_dataset/7xta/annotation/7xta_E_VH.ann
sabdab_dataset/7xta/annotation/7xta_E_VL.ann
sabdab_dataset/7xta/imgt/7xta_E_H.ann
sabdab_dataset/7xta/imgt/7xta_E_L.ann
sabdab_dataset/7xta/sequence/7xta_raw.pdb
sabdab_dataset/7xta/sequence/7xta_E_VH.fa
sabdab_dataset/7xta/sequence/7xta_E_VL.fa
sabdab_dataset/7xta/structure/7xta.pdb
sabdab_dataset/7xta/structure/chothia/7xta.pdb
false
false
train
7xtb
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/27/22
Serotonin 6 (5-HT6) receptor-Gs-Nb35 complex
Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens
Huang, S., Xu, P., Shen, D.D., Simon, I.A., Mao, C., Tan, Y., Zhang, H., Harpsoe, K., Li, H., Zhang, Y., You, C., Yu, X., Jiang, Y., Zhang, Y., Gloriam, D.E., Xu, H.E.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7xtb/annotation/7xtb_N_VH.ann
null
sabdab_dataset/7xtb/imgt/7xtb_N_H.ann
null
sabdab_dataset/7xtb/sequence/7xtb_raw.pdb
sabdab_dataset/7xtb/sequence/7xtb_N_VH.fa
null
sabdab_dataset/7xtb/structure/7xtb.pdb
sabdab_dataset/7xtb/structure/chothia/7xtb.pdb
false
false
train
7xtc
N
null
0
A | B | G
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2
MEMBRANE PROTEIN
07/27/22
Serotonin 7 (5-HT7) receptor-Gs-Nb35 complex
Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens | homo sapiens
Huang, S., Xu, P., Shen, D.D., Simon, I.A., Mao, C., Tan, Y., Zhang, H., Harpsoe, K., Li, H., Zhang, Y., You, C., Yu, X., Jiang, Y., Zhang, Y., Gloriam, D.E., Xu, H.E.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7xtc/annotation/7xtc_N_VH.ann
null
sabdab_dataset/7xtc/imgt/7xtc_N_H.ann
null
sabdab_dataset/7xtc/sequence/7xtc_raw.pdb
sabdab_dataset/7xtc/sequence/7xtc_N_VH.fa
null
sabdab_dataset/7xtc/structure/7xtc.pdb
sabdab_dataset/7xtc/structure/chothia/7xtc.pdb
false
false
train
7xtp
C
null
0
A
protein
null
eukaryotic translation initiation factor 4e
RNA BINDING PROTEIN
07/27/22
eIF4E in Complex with a Disulphide-Free Autonomous VH Domain
Homo sapiens
homo sapiens
null
homo sapiens
Brown, C.J., Frosi, Y., Jiang, S., Lin, Y.C.
1.828
X-RAY DIFFRACTION
0.259
0.226
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7xtp/annotation/7xtp_C_VH.ann
null
sabdab_dataset/7xtp/imgt/7xtp_C_H.ann
null
sabdab_dataset/7xtp/sequence/7xtp_raw.pdb
sabdab_dataset/7xtp/sequence/7xtp_C_VH.fa
null
sabdab_dataset/7xtp/structure/7xtp.pdb
sabdab_dataset/7xtp/structure/chothia/7xtp.pdb
true
true
train
7xtp
D
null
0
B
protein
null
eukaryotic translation initiation factor 4e
RNA BINDING PROTEIN
07/27/22
eIF4E in Complex with a Disulphide-Free Autonomous VH Domain
Homo sapiens
homo sapiens
null
homo sapiens
Brown, C.J., Frosi, Y., Jiang, S., Lin, Y.C.
1.828
X-RAY DIFFRACTION
0.259
0.226
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7xtp/annotation/7xtp_D_VH.ann
null
sabdab_dataset/7xtp/imgt/7xtp_D_H.ann
null
sabdab_dataset/7xtp/sequence/7xtp_raw.pdb
sabdab_dataset/7xtp/sequence/7xtp_D_VH.fa
null
sabdab_dataset/7xtp/structure/7xtp.pdb
sabdab_dataset/7xtp/structure/chothia/7xtp.pdb
true
false
train
7xtq
N
null
0
A | B | G
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2
MEMBRANE PROTEIN
07/06/22
Cryo-EM structure of the R399-bound GPBAR-Gs complex
Homo sapiens; synthetic construct
synthetic construct
null
homo sapiens | homo sapiens | homo sapiens
Ma, L., Yang, F., Wu, X., Mao, C., Sun, J., Yu, X., Zhang, Y., Zhang, P.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7xtq/annotation/7xtq_N_VH.ann
null
sabdab_dataset/7xtq/imgt/7xtq_N_H.ann
null
sabdab_dataset/7xtq/sequence/7xtq_raw.pdb
sabdab_dataset/7xtq/sequence/7xtq_N_VH.fa
null
sabdab_dataset/7xtq/structure/7xtq.pdb
sabdab_dataset/7xtq/structure/chothia/7xtq.pdb
false
false
train
7xv3
N
null
0
A | B
protein | protein
NA | NA
engineered g protein subunit s (mini-gs) | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
02/15/23
Cryo-EM structure of LPS-bound GPR174 in complex with Gs protein
Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens
He, Y., Liang, J.
2.76
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7xv3/annotation/7xv3_N_VH.ann
null
sabdab_dataset/7xv3/imgt/7xv3_N_H.ann
null
sabdab_dataset/7xv3/sequence/7xv3_raw.pdb
sabdab_dataset/7xv3/sequence/7xv3_N_VH.fa
null
sabdab_dataset/7xv3/structure/7xv3.pdb
sabdab_dataset/7xv3/structure/chothia/7xv3.pdb
false
false
test
7xw5
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
08/24/22
TSHR-thyroid stimulating hormone-Gs-ML109 complex
Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens
Duan, J., Xu, P., Luan, X., Ji, Y., Yuan, Q., He, X., Ye, J., Cheng, X., Jiang, H., Zhang, S., Jiang, Y., Xu, H.E.
2.96
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7xw5/annotation/7xw5_N_VH.ann
null
sabdab_dataset/7xw5/imgt/7xw5_N_H.ann
null
sabdab_dataset/7xw5/sequence/7xw5_raw.pdb
sabdab_dataset/7xw5/sequence/7xw5_N_VH.fa
null
sabdab_dataset/7xw5/structure/7xw5.pdb
sabdab_dataset/7xw5/structure/chothia/7xw5.pdb
false
false
train
7xw6
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
08/17/22
TSHR-Gs-M22 antibody-ML109 complex
Homo sapiens; Mus musculus
homo sapiens
null
homo sapiens | homo sapiens
Duan, J., Xu, P., Luan, X., Ji, Y., Yuan, Q., He, X., Ye, J., Cheng, X., Jiang, H., Zhang, S., Jiang, Y., Xu, H.E.
2.78
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
sabdab_dataset/7xw6/abangle/7xw6.abangle
sabdab_dataset/7xw6/annotation/7xw6_N_VH.ann
null
sabdab_dataset/7xw6/imgt/7xw6_N_H.ann
null
sabdab_dataset/7xw6/sequence/7xw6_raw.pdb
sabdab_dataset/7xw6/sequence/7xw6_N_VH.fa
null
sabdab_dataset/7xw6/structure/7xw6.pdb
sabdab_dataset/7xw6/structure/chothia/7xw6.pdb
false
false
test
7xw6
Y
L
0
R
protein
null
thyrotropin receptor
MEMBRANE PROTEIN
08/17/22
TSHR-Gs-M22 antibody-ML109 complex
Homo sapiens; Mus musculus
homo sapiens
mus musculus
homo sapiens
Duan, J., Xu, P., Luan, X., Ji, Y., Yuan, Q., He, X., Ye, J., Cheng, X., Jiang, H., Zhang, S., Jiang, Y., Xu, H.E.
2.78
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7xw6/abangle/7xw6.abangle
sabdab_dataset/7xw6/annotation/7xw6_Y_VH.ann
sabdab_dataset/7xw6/annotation/7xw6_L_VL.ann
sabdab_dataset/7xw6/imgt/7xw6_Y_H.ann
sabdab_dataset/7xw6/imgt/7xw6_L_L.ann
sabdab_dataset/7xw6/sequence/7xw6_raw.pdb
sabdab_dataset/7xw6/sequence/7xw6_Y_VH.fa
sabdab_dataset/7xw6/sequence/7xw6_L_VL.fa
sabdab_dataset/7xw6/structure/7xw6.pdb
sabdab_dataset/7xw6/structure/chothia/7xw6.pdb
false
false
train
7xw7
A
B
0
R
protein
null
thyrotropin receptor
MEMBRANE PROTEIN
08/17/22
TSHR-K1-70 complex
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Duan, J., Xu, P., Luan, X., Ji, Y., Yuan, Q., He, X., Ye, J., Cheng, X., Jiang, H., Zhang, S., Jiang, Y., Xu, H.E.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7xw7/abangle/7xw7.abangle
sabdab_dataset/7xw7/annotation/7xw7_A_VH.ann
sabdab_dataset/7xw7/annotation/7xw7_B_VL.ann
sabdab_dataset/7xw7/imgt/7xw7_A_H.ann
sabdab_dataset/7xw7/imgt/7xw7_B_L.ann
sabdab_dataset/7xw7/sequence/7xw7_raw.pdb
sabdab_dataset/7xw7/sequence/7xw7_A_VH.fa
sabdab_dataset/7xw7/sequence/7xw7_B_VL.fa
sabdab_dataset/7xw7/structure/7xw7.pdb
sabdab_dataset/7xw7/structure/chothia/7xw7.pdb
false
false
train
7xw9
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(q) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
STRUCTURAL PROTEIN
12/28/22
Cryo-EM structure of the TRH-bound human TRHR-Gq complex
Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct; SYNTHETIC CONSTRUCT
synthetic construct
null
homo sapiens | rattus norvegicus
Ji, S., Dong, Y., Chen, L., Zang, S., Shen, D., Guo, J., Qin, J., Zhang, H., Wang, W., Shen, Q., Mao, C., Zhang, Y.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7xw9/abangle/7xw9.abangle
sabdab_dataset/7xw9/annotation/7xw9_S_VH.ann
sabdab_dataset/7xw9/annotation/7xw9_S_VL.ann
sabdab_dataset/7xw9/imgt/7xw9_S_H.ann
sabdab_dataset/7xw9/imgt/7xw9_S_L.ann
sabdab_dataset/7xw9/sequence/7xw9_raw.pdb
sabdab_dataset/7xw9/sequence/7xw9_S_VH.fa
sabdab_dataset/7xw9/sequence/7xw9_S_VL.fa
sabdab_dataset/7xw9/structure/7xw9.pdb
sabdab_dataset/7xw9/structure/chothia/7xw9.pdb
false
false
train
7xwo
E
e
0
F | C
protein | protein
NA | NA
g324 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
05/31/23
Neurokinin A bound to active human neurokinin 2 receptor in complex with G324
Bos taurus; Homo sapiens; Rattus norvegicus
rattus norvegicus
null
homo sapiens | rattus norvegicus
Sun, W.J., Yuan, Q.N., Zhang, H.H., Yang, F., Ling, S.L., Lv, P., Eric, X., Tian, C.L., Yin, W.C., Shi, P.
2.7
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7xwo/abangle/7xwo.abangle
sabdab_dataset/7xwo/annotation/7xwo_E_VH.ann
sabdab_dataset/7xwo/annotation/7xwo_E_VL.ann
sabdab_dataset/7xwo/imgt/7xwo_E_H.ann
sabdab_dataset/7xwo/imgt/7xwo_E_L.ann
sabdab_dataset/7xwo/sequence/7xwo_raw.pdb
sabdab_dataset/7xwo/sequence/7xwo_E_VH.fa
sabdab_dataset/7xwo/sequence/7xwo_E_VL.fa
sabdab_dataset/7xwo/structure/7xwo.pdb
sabdab_dataset/7xwo/structure/chothia/7xwo.pdb
false
false
test
7xxh
H
h
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(11) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
06/07/23
Cryo-EM structure of the purinergic receptor P2Y1R in complex with 2MeSADP and G11
Homo sapiens
homo sapiens
null
homo sapiens | homo sapiens
Tan, Q., Li, B., Han, S., Zhao, Q., Wu, B.
2.9
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7xxh/abangle/7xxh.abangle
sabdab_dataset/7xxh/annotation/7xxh_H_VH.ann
sabdab_dataset/7xxh/annotation/7xxh_H_VL.ann
sabdab_dataset/7xxh/imgt/7xxh_H_H.ann
sabdab_dataset/7xxh/imgt/7xxh_H_L.ann
sabdab_dataset/7xxh/sequence/7xxh_raw.pdb
sabdab_dataset/7xxh/sequence/7xxh_H_VH.fa
sabdab_dataset/7xxh/sequence/7xxh_H_VL.fa
sabdab_dataset/7xxh/structure/7xxh.pdb
sabdab_dataset/7xxh/structure/chothia/7xxh.pdb
false
false
train
7xxl
A
C
0
B
protein
null
spike protein s1
IMMUNE SYSTEM/VIRAL PROTEIN
09/14/22
RBD in complex with Fab14
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Lin, J.Q., Tan, Y.J.E., Wu, B., Lescar, J.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV6
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/7xxl/abangle/7xxl.abangle
sabdab_dataset/7xxl/annotation/7xxl_A_VH.ann
sabdab_dataset/7xxl/annotation/7xxl_C_VL.ann
sabdab_dataset/7xxl/imgt/7xxl_A_H.ann
sabdab_dataset/7xxl/imgt/7xxl_C_L.ann
sabdab_dataset/7xxl/sequence/7xxl_raw.pdb
sabdab_dataset/7xxl/sequence/7xxl_A_VH.fa
sabdab_dataset/7xxl/sequence/7xxl_C_VL.fa
sabdab_dataset/7xxl/structure/7xxl.pdb
sabdab_dataset/7xxl/structure/chothia/7xxl.pdb
false
false
validation
7xy3
D
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
09/13/23
Cryo-EM structure of SARS-CoV-2 spike in complex with VHH14
Camelus bactrianus; Severe acute respiratory syndrome coronavirus 2
camelus bactrianus
null
severe acute respiratory syndrome coronavirus2
Cao, D., Fan, X., Zhang, X.
4.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7xy3/annotation/7xy3_D_VH.ann
null
sabdab_dataset/7xy3/imgt/7xy3_D_H.ann
null
sabdab_dataset/7xy3/sequence/7xy3_raw.pdb
sabdab_dataset/7xy3/sequence/7xy3_D_VH.fa
null
sabdab_dataset/7xy3/structure/7xy3.pdb
sabdab_dataset/7xy3/structure/chothia/7xy3.pdb
false
false
train
7xy4
D
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
09/13/23
Cryo-EM structure of SARS-CoV-2 spike in complex with VHH21
Camelus bactrianus; Severe acute respiratory syndrome coronavirus 2
camelus bactrianus
null
severe acute respiratory syndrome coronavirus2
Cao, D., Fan, X., Zhang, X.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7xy4/annotation/7xy4_D_VH.ann
null
sabdab_dataset/7xy4/imgt/7xy4_D_H.ann
null
sabdab_dataset/7xy4/sequence/7xy4_raw.pdb
sabdab_dataset/7xy4/sequence/7xy4_D_VH.fa
null
sabdab_dataset/7xy4/structure/7xy4.pdb
sabdab_dataset/7xy4/structure/chothia/7xy4.pdb
false
false
train
7xy4
E
null
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
09/13/23
Cryo-EM structure of SARS-CoV-2 spike in complex with VHH21
Camelus bactrianus; Severe acute respiratory syndrome coronavirus 2
camelus bactrianus
null
severe acute respiratory syndrome coronavirus2
Cao, D., Fan, X., Zhang, X.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7xy4/annotation/7xy4_E_VH.ann
null
sabdab_dataset/7xy4/imgt/7xy4_E_H.ann
null
sabdab_dataset/7xy4/sequence/7xy4_raw.pdb
sabdab_dataset/7xy4/sequence/7xy4_E_VH.fa
null
sabdab_dataset/7xy4/structure/7xy4.pdb
sabdab_dataset/7xy4/structure/chothia/7xy4.pdb
false
false
train
7xy8
H
L
0
A
protein
null
isoform 2 of basigin
PROTEIN BINDING
11/23/22
Crystal structure of antibody Fab fragment in complex with CD147(EMMPIRIN)
Homo sapiens; synthetic construct
synthetic construct
synthetic construct
homo sapiens
Nakamura, K., Amano, M., Yoneda, K., Suzuki, M., Fukuchi, K.
2.3
X-RAY DIFFRACTION
0.281
0.236
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7xy8/abangle/7xy8.abangle
sabdab_dataset/7xy8/annotation/7xy8_H_VH.ann
sabdab_dataset/7xy8/annotation/7xy8_L_VL.ann
sabdab_dataset/7xy8/imgt/7xy8_H_H.ann
sabdab_dataset/7xy8/imgt/7xy8_L_L.ann
sabdab_dataset/7xy8/sequence/7xy8_raw.pdb
sabdab_dataset/7xy8/sequence/7xy8_H_VH.fa
sabdab_dataset/7xy8/sequence/7xy8_L_VL.fa
sabdab_dataset/7xy8/structure/7xy8.pdb
sabdab_dataset/7xy8/structure/chothia/7xy8.pdb
true
false
train
7xy8
I
M
0
B
protein
null
isoform 2 of basigin
PROTEIN BINDING
11/23/22
Crystal structure of antibody Fab fragment in complex with CD147(EMMPIRIN)
Homo sapiens; synthetic construct
synthetic construct
synthetic construct
homo sapiens
Nakamura, K., Amano, M., Yoneda, K., Suzuki, M., Fukuchi, K.
2.3
X-RAY DIFFRACTION
0.281
0.236
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7xy8/abangle/7xy8.abangle
sabdab_dataset/7xy8/annotation/7xy8_I_VH.ann
sabdab_dataset/7xy8/annotation/7xy8_M_VL.ann
sabdab_dataset/7xy8/imgt/7xy8_I_H.ann
sabdab_dataset/7xy8/imgt/7xy8_M_L.ann
sabdab_dataset/7xy8/sequence/7xy8_raw.pdb
sabdab_dataset/7xy8/sequence/7xy8_I_VH.fa
sabdab_dataset/7xy8/sequence/7xy8_M_VL.fa
sabdab_dataset/7xy8/structure/7xy8.pdb
sabdab_dataset/7xy8/structure/chothia/7xy8.pdb
true
false
train
7xz5
N
null
0
A | B | G
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2
MEMBRANE PROTEIN
08/24/22
GPR119-Gs-LPC complex
Escherichia coli; Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens | homo sapiens
Xu, P., Huang, S., Jiang, Y., Xu, H.E.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7xz5/annotation/7xz5_N_VH.ann
null
sabdab_dataset/7xz5/imgt/7xz5_N_H.ann
null
sabdab_dataset/7xz5/sequence/7xz5_raw.pdb
sabdab_dataset/7xz5/sequence/7xz5_N_VH.fa
null
sabdab_dataset/7xz5/structure/7xz5.pdb
sabdab_dataset/7xz5/structure/chothia/7xz5.pdb
false
false
train
7xz6
N
null
0
A | G | B
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
08/24/22
GPR119-Gs-APD668 complex
Escherichia coli; Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens | homo sapiens
Xu, P., Huang, S., Jiang, Y., Xu, H.E.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7xz6/annotation/7xz6_N_VH.ann
null
sabdab_dataset/7xz6/imgt/7xz6_N_H.ann
null
sabdab_dataset/7xz6/sequence/7xz6_raw.pdb
sabdab_dataset/7xz6/sequence/7xz6_N_VH.fa
null
sabdab_dataset/7xz6/structure/7xz6.pdb
sabdab_dataset/7xz6/structure/chothia/7xz6.pdb
false
false
train
7y0c
A
B
0
R
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
09/28/22
Crystal structure of BD55-1403 and SARS-CoV-2 Omicron RBD
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhang, Z., Xiao, J.
2.94
X-RAY DIFFRACTION
0.278
0.202
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7y0c/abangle/7y0c.abangle
sabdab_dataset/7y0c/annotation/7y0c_A_VH.ann
sabdab_dataset/7y0c/annotation/7y0c_B_VL.ann
sabdab_dataset/7y0c/imgt/7y0c_A_H.ann
sabdab_dataset/7y0c/imgt/7y0c_B_L.ann
sabdab_dataset/7y0c/sequence/7y0c_raw.pdb
sabdab_dataset/7y0c/sequence/7y0c_A_VH.fa
sabdab_dataset/7y0c/sequence/7y0c_B_VL.fa
sabdab_dataset/7y0c/structure/7y0c.pdb
sabdab_dataset/7y0c/structure/chothia/7y0c.pdb
false
false
train
7y0c
M
N
0
E
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
09/28/22
Crystal structure of BD55-1403 and SARS-CoV-2 Omicron RBD
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhang, Z., Xiao, J.
2.94
X-RAY DIFFRACTION
0.278
0.202
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7y0c/abangle/7y0c.abangle
sabdab_dataset/7y0c/annotation/7y0c_M_VH.ann
sabdab_dataset/7y0c/annotation/7y0c_N_VL.ann
sabdab_dataset/7y0c/imgt/7y0c_M_H.ann
sabdab_dataset/7y0c/imgt/7y0c_N_L.ann
sabdab_dataset/7y0c/sequence/7y0c_raw.pdb
sabdab_dataset/7y0c/sequence/7y0c_M_VH.fa
sabdab_dataset/7y0c/sequence/7y0c_N_VL.fa
sabdab_dataset/7y0c/structure/7y0c.pdb
sabdab_dataset/7y0c/structure/chothia/7y0c.pdb
false
false
train
7y0g
B
A
0
B
Hapten
P15
2,5,8,11,14,17-HEXAOXANONADECAN-19-OL
IMMUNE SYSTEM
08/10/22
Crystal structure of anti-mPEG h15-2b Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Chang, C.Y., Nguyen, T.M.T., Lin, E.C., Su, Y.C.
2.08
X-RAY DIFFRACTION
0.245
0.211
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y0g/abangle/7y0g.abangle
sabdab_dataset/7y0g/annotation/7y0g_B_VH.ann
sabdab_dataset/7y0g/annotation/7y0g_A_VL.ann
sabdab_dataset/7y0g/imgt/7y0g_B_H.ann
sabdab_dataset/7y0g/imgt/7y0g_A_L.ann
sabdab_dataset/7y0g/sequence/7y0g_raw.pdb
sabdab_dataset/7y0g/sequence/7y0g_B_VH.fa
sabdab_dataset/7y0g/sequence/7y0g_A_VL.fa
sabdab_dataset/7y0g/structure/7y0g.pdb
sabdab_dataset/7y0g/structure/chothia/7y0g.pdb
false
false
train
7y0g
E
D
0
E
Hapten
P15
2,5,8,11,14,17-HEXAOXANONADECAN-19-OL
IMMUNE SYSTEM
08/10/22
Crystal structure of anti-mPEG h15-2b Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Chang, C.Y., Nguyen, T.M.T., Lin, E.C., Su, Y.C.
2.08
X-RAY DIFFRACTION
0.245
0.211
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y0g/abangle/7y0g.abangle
sabdab_dataset/7y0g/annotation/7y0g_E_VH.ann
sabdab_dataset/7y0g/annotation/7y0g_D_VL.ann
sabdab_dataset/7y0g/imgt/7y0g_E_H.ann
sabdab_dataset/7y0g/imgt/7y0g_D_L.ann
sabdab_dataset/7y0g/sequence/7y0g_raw.pdb
sabdab_dataset/7y0g/sequence/7y0g_E_VH.fa
sabdab_dataset/7y0g/sequence/7y0g_D_VL.fa
sabdab_dataset/7y0g/structure/7y0g.pdb
sabdab_dataset/7y0g/structure/chothia/7y0g.pdb
false
false
train
7y0g
H
G
0
H
Hapten
P15
2,5,8,11,14,17-HEXAOXANONADECAN-19-OL
IMMUNE SYSTEM
08/10/22
Crystal structure of anti-mPEG h15-2b Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Chang, C.Y., Nguyen, T.M.T., Lin, E.C., Su, Y.C.
2.08
X-RAY DIFFRACTION
0.245
0.211
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y0g/abangle/7y0g.abangle
sabdab_dataset/7y0g/annotation/7y0g_H_VH.ann
sabdab_dataset/7y0g/annotation/7y0g_G_VL.ann
sabdab_dataset/7y0g/imgt/7y0g_H_H.ann
sabdab_dataset/7y0g/imgt/7y0g_G_L.ann
sabdab_dataset/7y0g/sequence/7y0g_raw.pdb
sabdab_dataset/7y0g/sequence/7y0g_H_VH.fa
sabdab_dataset/7y0g/sequence/7y0g_G_VL.fa
sabdab_dataset/7y0g/structure/7y0g.pdb
sabdab_dataset/7y0g/structure/chothia/7y0g.pdb
false
false
test
7y0g
K
J
0
K
Hapten
P15
2,5,8,11,14,17-HEXAOXANONADECAN-19-OL
IMMUNE SYSTEM
08/10/22
Crystal structure of anti-mPEG h15-2b Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Chang, C.Y., Nguyen, T.M.T., Lin, E.C., Su, Y.C.
2.08
X-RAY DIFFRACTION
0.245
0.211
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y0g/abangle/7y0g.abangle
sabdab_dataset/7y0g/annotation/7y0g_K_VH.ann
sabdab_dataset/7y0g/annotation/7y0g_J_VL.ann
sabdab_dataset/7y0g/imgt/7y0g_K_H.ann
sabdab_dataset/7y0g/imgt/7y0g_J_L.ann
sabdab_dataset/7y0g/sequence/7y0g_raw.pdb
sabdab_dataset/7y0g/sequence/7y0g_K_VH.fa
sabdab_dataset/7y0g/sequence/7y0g_J_VL.fa
sabdab_dataset/7y0g/structure/7y0g.pdb
sabdab_dataset/7y0g/structure/chothia/7y0g.pdb
false
false
test
7y0n
C
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
09/13/23
SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, L.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y0n/abangle/7y0n.abangle
sabdab_dataset/7y0n/annotation/7y0n_C_VH.ann
sabdab_dataset/7y0n/annotation/7y0n_L_VL.ann
sabdab_dataset/7y0n/imgt/7y0n_C_H.ann
sabdab_dataset/7y0n/imgt/7y0n_L_L.ann
sabdab_dataset/7y0n/sequence/7y0n_raw.pdb
sabdab_dataset/7y0n/sequence/7y0n_C_VH.fa
sabdab_dataset/7y0n/sequence/7y0n_L_VL.fa
sabdab_dataset/7y0n/structure/7y0n.pdb
sabdab_dataset/7y0n/structure/chothia/7y0n.pdb
false
false
train
7y0n
E
J
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
09/13/23
SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, L.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y0n/abangle/7y0n.abangle
sabdab_dataset/7y0n/annotation/7y0n_E_VH.ann
sabdab_dataset/7y0n/annotation/7y0n_J_VL.ann
sabdab_dataset/7y0n/imgt/7y0n_E_H.ann
sabdab_dataset/7y0n/imgt/7y0n_J_L.ann
sabdab_dataset/7y0n/sequence/7y0n_raw.pdb
sabdab_dataset/7y0n/sequence/7y0n_E_VH.fa
sabdab_dataset/7y0n/sequence/7y0n_J_VL.fa
sabdab_dataset/7y0n/structure/7y0n.pdb
sabdab_dataset/7y0n/structure/chothia/7y0n.pdb
false
false
train
7y0n
F
K
0
D
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
09/13/23
SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, L.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y0n/abangle/7y0n.abangle
sabdab_dataset/7y0n/annotation/7y0n_F_VH.ann
sabdab_dataset/7y0n/annotation/7y0n_K_VL.ann
sabdab_dataset/7y0n/imgt/7y0n_F_H.ann
sabdab_dataset/7y0n/imgt/7y0n_K_L.ann
sabdab_dataset/7y0n/sequence/7y0n_raw.pdb
sabdab_dataset/7y0n/sequence/7y0n_F_VH.fa
sabdab_dataset/7y0n/sequence/7y0n_K_VL.fa
sabdab_dataset/7y0n/structure/7y0n.pdb
sabdab_dataset/7y0n/structure/chothia/7y0n.pdb
false
false
train
7y0n
G
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
09/13/23
SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Wang, L.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
sabdab_dataset/7y0n/abangle/7y0n.abangle
sabdab_dataset/7y0n/annotation/7y0n_G_VH.ann
null
sabdab_dataset/7y0n/imgt/7y0n_G_H.ann
null
sabdab_dataset/7y0n/sequence/7y0n_raw.pdb
sabdab_dataset/7y0n/sequence/7y0n_G_VH.fa
null
sabdab_dataset/7y0n/structure/7y0n.pdb
sabdab_dataset/7y0n/structure/chothia/7y0n.pdb
false
false
train
7y0n
H
null
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
09/13/23
SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Wang, L.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
sabdab_dataset/7y0n/abangle/7y0n.abangle
sabdab_dataset/7y0n/annotation/7y0n_H_VH.ann
null
sabdab_dataset/7y0n/imgt/7y0n_H_H.ann
null
sabdab_dataset/7y0n/sequence/7y0n_raw.pdb
sabdab_dataset/7y0n/sequence/7y0n_H_VH.fa
null
sabdab_dataset/7y0n/structure/7y0n.pdb
sabdab_dataset/7y0n/structure/chothia/7y0n.pdb
false
false
train
7y0n
I
null
0
D
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
09/13/23
SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Wang, L.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
sabdab_dataset/7y0n/abangle/7y0n.abangle
sabdab_dataset/7y0n/annotation/7y0n_I_VH.ann
null
sabdab_dataset/7y0n/imgt/7y0n_I_H.ann
null
sabdab_dataset/7y0n/sequence/7y0n_raw.pdb
sabdab_dataset/7y0n/sequence/7y0n_I_VH.fa
null
sabdab_dataset/7y0n/structure/7y0n.pdb
sabdab_dataset/7y0n/structure/chothia/7y0n.pdb
false
false
train
7y0o
B
null
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
09/06/23
Interface of SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Wang, L.
4.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
sabdab_dataset/7y0o/abangle/7y0o.abangle
sabdab_dataset/7y0o/annotation/7y0o_B_VH.ann
null
sabdab_dataset/7y0o/imgt/7y0o_B_H.ann
null
sabdab_dataset/7y0o/sequence/7y0o_raw.pdb
sabdab_dataset/7y0o/sequence/7y0o_B_VH.fa
null
sabdab_dataset/7y0o/structure/7y0o.pdb
sabdab_dataset/7y0o/structure/chothia/7y0o.pdb
false
false
train
7y0o
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
09/06/23
Interface of SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, L.
4.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y0o/abangle/7y0o.abangle
sabdab_dataset/7y0o/annotation/7y0o_H_VH.ann
sabdab_dataset/7y0o/annotation/7y0o_L_VL.ann
sabdab_dataset/7y0o/imgt/7y0o_H_H.ann
sabdab_dataset/7y0o/imgt/7y0o_L_L.ann
sabdab_dataset/7y0o/sequence/7y0o_raw.pdb
sabdab_dataset/7y0o/sequence/7y0o_H_VH.fa
sabdab_dataset/7y0o/sequence/7y0o_L_VL.fa
sabdab_dataset/7y0o/structure/7y0o.pdb
sabdab_dataset/7y0o/structure/chothia/7y0o.pdb
false
false
train
7y0v
H
L
0
R
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
09/28/22
The co-crystal structure of BA.1-RBD with Fab-5549
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Xiao, J.Y., Zhang, Y.
2.48
X-RAY DIFFRACTION
0.268
0.211
false
true
IGHV4
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/7y0v/abangle/7y0v.abangle
sabdab_dataset/7y0v/annotation/7y0v_H_VH.ann
sabdab_dataset/7y0v/annotation/7y0v_L_VL.ann
sabdab_dataset/7y0v/imgt/7y0v_H_H.ann
sabdab_dataset/7y0v/imgt/7y0v_L_L.ann
sabdab_dataset/7y0v/sequence/7y0v_raw.pdb
sabdab_dataset/7y0v/sequence/7y0v_H_VH.fa
sabdab_dataset/7y0v/sequence/7y0v_L_VL.fa
sabdab_dataset/7y0v/structure/7y0v.pdb
sabdab_dataset/7y0v/structure/chothia/7y0v.pdb
true
false
train
7y0w
A
B
0
R
protein
null
spike protein s1
VIRAL PROTEIN
09/28/22
Local structure of BD55-5514 and BD55-5840 Fab and Omicron BA.1 RBD complex
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Zhang, Z., Xiao, J.
3.42
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y0w/abangle/7y0w.abangle
sabdab_dataset/7y0w/annotation/7y0w_A_VH.ann
sabdab_dataset/7y0w/annotation/7y0w_B_VL.ann
sabdab_dataset/7y0w/imgt/7y0w_A_H.ann
sabdab_dataset/7y0w/imgt/7y0w_B_L.ann
sabdab_dataset/7y0w/sequence/7y0w_raw.pdb
sabdab_dataset/7y0w/sequence/7y0w_A_VH.fa
sabdab_dataset/7y0w/sequence/7y0w_B_VL.fa
sabdab_dataset/7y0w/structure/7y0w.pdb
sabdab_dataset/7y0w/structure/chothia/7y0w.pdb
false
false
validation
7y0w
H
L
0
R
protein
null
spike protein s1
VIRAL PROTEIN
09/28/22
Local structure of BD55-5514 and BD55-5840 Fab and Omicron BA.1 RBD complex
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Zhang, Z., Xiao, J.
3.42
ELECTRON MICROSCOPY
null
null
false
true
IGHV7
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7y0w/abangle/7y0w.abangle
sabdab_dataset/7y0w/annotation/7y0w_H_VH.ann
sabdab_dataset/7y0w/annotation/7y0w_L_VL.ann
sabdab_dataset/7y0w/imgt/7y0w_H_H.ann
sabdab_dataset/7y0w/imgt/7y0w_L_L.ann
sabdab_dataset/7y0w/sequence/7y0w_raw.pdb
sabdab_dataset/7y0w/sequence/7y0w_H_VH.fa
sabdab_dataset/7y0w/sequence/7y0w_L_VL.fa
sabdab_dataset/7y0w/structure/7y0w.pdb
sabdab_dataset/7y0w/structure/chothia/7y0w.pdb
false
false
train
7y12
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
07/20/22
Cryo-EM structure of MrgD-Gi complex with beta-alanine
Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
synthetic construct
null
homo sapiens | mus musculus
Suzuki, S., Iida, M., Kawamoto, A., Oshima, A.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y12/abangle/7y12.abangle
sabdab_dataset/7y12/annotation/7y12_S_VH.ann
sabdab_dataset/7y12/annotation/7y12_S_VL.ann
sabdab_dataset/7y12/imgt/7y12_S_H.ann
sabdab_dataset/7y12/imgt/7y12_S_L.ann
sabdab_dataset/7y12/sequence/7y12_raw.pdb
sabdab_dataset/7y12/sequence/7y12_S_VH.fa
sabdab_dataset/7y12/sequence/7y12_S_VL.fa
sabdab_dataset/7y12/structure/7y12.pdb
sabdab_dataset/7y12/structure/chothia/7y12.pdb
false
false
test
7y15
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
07/20/22
Cryo-EM structure of apo-state MrgD-Gi complex
Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
synthetic construct
null
homo sapiens | mus musculus
Suzuki, S., Iida, M., Kawamoto, A., Oshima, A.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y15/abangle/7y15.abangle
sabdab_dataset/7y15/annotation/7y15_S_VH.ann
sabdab_dataset/7y15/annotation/7y15_S_VL.ann
sabdab_dataset/7y15/imgt/7y15_S_H.ann
sabdab_dataset/7y15/imgt/7y15_S_L.ann
sabdab_dataset/7y15/sequence/7y15_raw.pdb
sabdab_dataset/7y15/sequence/7y15_S_VH.fa
sabdab_dataset/7y15/sequence/7y15_S_VL.fa
sabdab_dataset/7y15/structure/7y15.pdb
sabdab_dataset/7y15/structure/chothia/7y15.pdb
false
false
train
7y1b
H
L
0
A
protein
null
isoform 2 of basigin
TRANSPORT PROTEIN
06/14/23
3.2 angstrom cryo-EM structure of extracellular region of mouse Basigin-2 in complex with the Fab fragment of antibody 6E7F1
Mus musculus
mus musculus
mus musculus
mus musculus
Zhang, H., Yang, X., Xue, Y., Huang, Y., Mo, X., Zhang, H., Li, N., Gao, N., Li, X., Wang, S., Gao, Y., Liao, J.
3.23
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/7y1b/abangle/7y1b.abangle
sabdab_dataset/7y1b/annotation/7y1b_H_VH.ann
sabdab_dataset/7y1b/annotation/7y1b_L_VL.ann
sabdab_dataset/7y1b/imgt/7y1b_H_H.ann
sabdab_dataset/7y1b/imgt/7y1b_L_L.ann
sabdab_dataset/7y1b/sequence/7y1b_raw.pdb
sabdab_dataset/7y1b/sequence/7y1b_H_VH.fa
sabdab_dataset/7y1b/sequence/7y1b_L_VL.fa
sabdab_dataset/7y1b/structure/7y1b.pdb
sabdab_dataset/7y1b/structure/chothia/7y1b.pdb
false
false
train
7y1f
E
e
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
STRUCTURAL PROTEIN
05/24/23
Cryo-EM structure of human k-opioid receptor-Gi complex
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
null
homo sapiens | homo sapiens
Chen, B.O., Xu, F.E.
3.3
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y1f/abangle/7y1f.abangle
sabdab_dataset/7y1f/annotation/7y1f_E_VH.ann
sabdab_dataset/7y1f/annotation/7y1f_E_VL.ann
sabdab_dataset/7y1f/imgt/7y1f_E_H.ann
sabdab_dataset/7y1f/imgt/7y1f_E_L.ann
sabdab_dataset/7y1f/sequence/7y1f_raw.pdb
sabdab_dataset/7y1f/sequence/7y1f_E_VH.fa
sabdab_dataset/7y1f/sequence/7y1f_E_VL.fa
sabdab_dataset/7y1f/structure/7y1f.pdb
sabdab_dataset/7y1f/structure/chothia/7y1f.pdb
false
false
train
7y24
S
s
0
A | G | B
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(o) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
STRUCTURAL PROTEIN
10/19/22
Cryo-EM structure of the octreotide-bound SSTR2-miniGo-scFv16 complex
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
null
homo sapiens | homo sapiens | homo sapiens
Chen, S., Zheng, S.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y24/abangle/7y24.abangle
sabdab_dataset/7y24/annotation/7y24_S_VH.ann
sabdab_dataset/7y24/annotation/7y24_S_VL.ann
sabdab_dataset/7y24/imgt/7y24_S_H.ann
sabdab_dataset/7y24/imgt/7y24_S_L.ann
sabdab_dataset/7y24/sequence/7y24_raw.pdb
sabdab_dataset/7y24/sequence/7y24_S_VH.fa
sabdab_dataset/7y24/sequence/7y24_S_VL.fa
sabdab_dataset/7y24/structure/7y24.pdb
sabdab_dataset/7y24/structure/chothia/7y24.pdb
false
false
train
7y26
D
d
0
B | A
protein | protein
NA | NA
engineered guanine nucleotide-binding protein g(q) subunitalpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
STRUCTURAL PROTEIN
10/19/22
Cryo-EM structure of the octreotide-bound SSTR2-miniGq-scFv16 complex
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
null
homo sapiens | homo sapiens
Chen, S., Zheng, S.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y26/abangle/7y26.abangle
sabdab_dataset/7y26/annotation/7y26_D_VH.ann
sabdab_dataset/7y26/annotation/7y26_D_VL.ann
sabdab_dataset/7y26/imgt/7y26_D_H.ann
sabdab_dataset/7y26/imgt/7y26_D_L.ann
sabdab_dataset/7y26/sequence/7y26_raw.pdb
sabdab_dataset/7y26/sequence/7y26_D_VH.fa
sabdab_dataset/7y26/sequence/7y26_D_VL.fa
sabdab_dataset/7y26/structure/7y26.pdb
sabdab_dataset/7y26/structure/chothia/7y26.pdb
false
false
train
7y27
D
d
0
B | A
protein | protein
NA | NA
engineered guanine nucleotide-binding protein g(q) subunitalpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
STRUCTURAL PROTEIN
10/19/22
Cryo-EM structure of the SST-14-bound SSTR2-miniGq-scFv16 complex
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
null
homo sapiens | homo sapiens
Chen, S., Zheng, S.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y27/abangle/7y27.abangle
sabdab_dataset/7y27/annotation/7y27_D_VH.ann
sabdab_dataset/7y27/annotation/7y27_D_VL.ann
sabdab_dataset/7y27/imgt/7y27_D_H.ann
sabdab_dataset/7y27/imgt/7y27_D_L.ann
sabdab_dataset/7y27/sequence/7y27_raw.pdb
sabdab_dataset/7y27/sequence/7y27_D_VH.fa
sabdab_dataset/7y27/sequence/7y27_D_VL.fa
sabdab_dataset/7y27/structure/7y27.pdb
sabdab_dataset/7y27/structure/chothia/7y27.pdb
false
false
train
7y35
N
null
0
A | B
protein | protein
NA | NA
isoform gnas-2 of guanine nucleotide-binding protein g(s)subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/05/23
Cryo-EM structure of the Abaloparatide-bound human PTH1R-Gs complex
Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct; SYNTHETIC CONSTRUCT
synthetic construct
null
homo sapiens | rattus norvegicus
Zhai, X., Mao, C., Shen, Q., Zang, S., Shen, D., Zhang, H., Chen, Z., Wang, G., Zhang, C., Zhang, Y., Liu, Z.
2.9
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7y35/annotation/7y35_N_VH.ann
null
sabdab_dataset/7y35/imgt/7y35_N_H.ann
null
sabdab_dataset/7y35/sequence/7y35_raw.pdb
sabdab_dataset/7y35/sequence/7y35_N_VH.fa
null
sabdab_dataset/7y35/structure/7y35.pdb
sabdab_dataset/7y35/structure/chothia/7y35.pdb
false
false
train
7y36
N
null
0
A | B
protein | protein
NA | NA
isoform gnas-2 of guanine nucleotide-binding protein g(s)subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/05/23
Cryo-EM structure of the Teriparatide-bound human PTH1R-Gs complex
Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct; SYNTHETIC CONSTRUCT
synthetic construct
null
homo sapiens | rattus norvegicus
Zhai, X., Mao, C., Shen, Q., Zang, S., Shen, D., Zhang, H., Chen, Z., Wang, G., Zhang, C., Zhang, Y., Liu, Z.
2.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7y36/annotation/7y36_N_VH.ann
null
sabdab_dataset/7y36/imgt/7y36_N_H.ann
null
sabdab_dataset/7y36/sequence/7y36_raw.pdb
sabdab_dataset/7y36/sequence/7y36_N_VH.fa
null
sabdab_dataset/7y36/structure/7y36.pdb
sabdab_dataset/7y36/structure/chothia/7y36.pdb
false
false
train
7y3g
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
06/07/23
Cryo-EM structure of a class A orphan GPCR
Homo sapiens; Lama glama
lama glama
null
homo sapiens | homo sapiens
Liu, Z.J., Hua, T., Li, H., Zhang, J.Y., Luo, F.
2.77
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7y3g/annotation/7y3g_N_VH.ann
null
sabdab_dataset/7y3g/imgt/7y3g_N_H.ann
null
sabdab_dataset/7y3g/sequence/7y3g_raw.pdb
sabdab_dataset/7y3g/sequence/7y3g_N_VH.fa
null
sabdab_dataset/7y3g/structure/7y3g.pdb
sabdab_dataset/7y3g/structure/chothia/7y3g.pdb
false
false
validation
7y3j
H
L
0
A
peptide
null
ala-leu-val-phe-phe-ala-pro-ala-val-gly-ser
IMMUNE SYSTEM
08/17/22
24B3 antibody-peptide complex
Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Irie, K., Irie, Y., Kita, A., Miki, K.
2.6
X-RAY DIFFRACTION
0.261
0.222
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y3j/abangle/7y3j.abangle
sabdab_dataset/7y3j/annotation/7y3j_H_VH.ann
sabdab_dataset/7y3j/annotation/7y3j_L_VL.ann
sabdab_dataset/7y3j/imgt/7y3j_H_H.ann
sabdab_dataset/7y3j/imgt/7y3j_L_L.ann
sabdab_dataset/7y3j/sequence/7y3j_raw.pdb
sabdab_dataset/7y3j/sequence/7y3j_H_VH.fa
sabdab_dataset/7y3j/sequence/7y3j_L_VL.fa
sabdab_dataset/7y3j/structure/7y3j.pdb
sabdab_dataset/7y3j/structure/chothia/7y3j.pdb
true
false
train
7y3n
C
D
0
B
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
12/27/23
Crystal structure of SARS-CoV receptor binding domain in complex with human antibody BIOLS56
Homo sapiens; Severe acute respiratory syndrome coronavirus
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus
Rao, X., Chai, Y., Wu, Y., Gao, F.
2.97
X-RAY DIFFRACTION
0.263
0.22
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y3n/abangle/7y3n.abangle
sabdab_dataset/7y3n/annotation/7y3n_C_VH.ann
sabdab_dataset/7y3n/annotation/7y3n_D_VL.ann
sabdab_dataset/7y3n/imgt/7y3n_C_H.ann
sabdab_dataset/7y3n/imgt/7y3n_D_L.ann
sabdab_dataset/7y3n/sequence/7y3n_raw.pdb
sabdab_dataset/7y3n/sequence/7y3n_C_VH.fa
sabdab_dataset/7y3n/sequence/7y3n_D_VL.fa
sabdab_dataset/7y3n/structure/7y3n.pdb
sabdab_dataset/7y3n/structure/chothia/7y3n.pdb
true
false
train
7y3n
F
G
0
E
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
12/27/23
Crystal structure of SARS-CoV receptor binding domain in complex with human antibody BIOLS56
Homo sapiens; Severe acute respiratory syndrome coronavirus
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus
Rao, X., Chai, Y., Wu, Y., Gao, F.
2.97
X-RAY DIFFRACTION
0.263
0.22
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y3n/abangle/7y3n.abangle
sabdab_dataset/7y3n/annotation/7y3n_F_VH.ann
sabdab_dataset/7y3n/annotation/7y3n_G_VL.ann
sabdab_dataset/7y3n/imgt/7y3n_F_H.ann
sabdab_dataset/7y3n/imgt/7y3n_G_L.ann
sabdab_dataset/7y3n/sequence/7y3n_raw.pdb
sabdab_dataset/7y3n/sequence/7y3n_F_VH.fa
sabdab_dataset/7y3n/sequence/7y3n_G_VL.fa
sabdab_dataset/7y3n/structure/7y3n.pdb
sabdab_dataset/7y3n/structure/chothia/7y3n.pdb
true
false
test
7y3n
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
12/27/23
Crystal structure of SARS-CoV receptor binding domain in complex with human antibody BIOLS56
Homo sapiens; Severe acute respiratory syndrome coronavirus
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus
Rao, X., Chai, Y., Wu, Y., Gao, F.
2.97
X-RAY DIFFRACTION
0.263
0.22
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y3n/abangle/7y3n.abangle
sabdab_dataset/7y3n/annotation/7y3n_H_VH.ann
sabdab_dataset/7y3n/annotation/7y3n_L_VL.ann
sabdab_dataset/7y3n/imgt/7y3n_H_H.ann
sabdab_dataset/7y3n/imgt/7y3n_L_L.ann
sabdab_dataset/7y3n/sequence/7y3n_raw.pdb
sabdab_dataset/7y3n/sequence/7y3n_H_VH.fa
sabdab_dataset/7y3n/sequence/7y3n_L_VL.fa
sabdab_dataset/7y3n/structure/7y3n.pdb
sabdab_dataset/7y3n/structure/chothia/7y3n.pdb
true
false
train
7y3o
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
12/27/23
Crystal structure of SARS-CoV-2 receptor binding domain in complex with human antibody BIOLS56
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Rao, X., Gao, F., Wu, Y., Gao, F.
2.1
X-RAY DIFFRACTION
0.229
0.183
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y3o/abangle/7y3o.abangle
sabdab_dataset/7y3o/annotation/7y3o_H_VH.ann
sabdab_dataset/7y3o/annotation/7y3o_L_VL.ann
sabdab_dataset/7y3o/imgt/7y3o_H_H.ann
sabdab_dataset/7y3o/imgt/7y3o_L_L.ann
sabdab_dataset/7y3o/sequence/7y3o_raw.pdb
sabdab_dataset/7y3o/sequence/7y3o_H_VH.fa
sabdab_dataset/7y3o/sequence/7y3o_L_VL.fa
sabdab_dataset/7y3o/structure/7y3o.pdb
sabdab_dataset/7y3o/structure/chothia/7y3o.pdb
false
false
test
7y58
B
null
0
A
protein
null
antiseptic resistance protein
MEMBRANE PROTEIN/IMMUNE SYSTEM
07/12/23
CryoEM structure of QacA (D411N), an antibacterial efflux transporter from Staphylococcus aureus
Camelus dromedarius; Staphylococcus aureus
camelus dromedarius
null
staphylococcus aureus
Penmatsa, A., Majumder, P.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7y58/annotation/7y58_B_VH.ann
null
sabdab_dataset/7y58/imgt/7y58_B_H.ann
null
sabdab_dataset/7y58/sequence/7y58_raw.pdb
sabdab_dataset/7y58/sequence/7y58_B_VH.fa
null
sabdab_dataset/7y58/structure/7y58.pdb
sabdab_dataset/7y58/structure/chothia/7y58.pdb
false
false
train
7y58
C
null
0
A
protein
null
antiseptic resistance protein
MEMBRANE PROTEIN/IMMUNE SYSTEM
07/12/23
CryoEM structure of QacA (D411N), an antibacterial efflux transporter from Staphylococcus aureus
Camelus dromedarius; Staphylococcus aureus
camelus dromedarius
null
staphylococcus aureus
Penmatsa, A., Majumder, P.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7y58/annotation/7y58_C_VH.ann
null
sabdab_dataset/7y58/imgt/7y58_C_H.ann
null
sabdab_dataset/7y58/sequence/7y58_raw.pdb
sabdab_dataset/7y58/sequence/7y58_C_VH.fa
null
sabdab_dataset/7y58/structure/7y58.pdb
sabdab_dataset/7y58/structure/chothia/7y58.pdb
false
false
train
7y64
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
03/01/23
Cryo-EM structure of C5a-bound C5aR1 in complex with Gi protein
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens
Feng, Y.Y., Zhao, C., Yan, W., Shao, Z.H.
2.9
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y64/abangle/7y64.abangle
sabdab_dataset/7y64/annotation/7y64_S_VH.ann
sabdab_dataset/7y64/annotation/7y64_S_VL.ann
sabdab_dataset/7y64/imgt/7y64_S_H.ann
sabdab_dataset/7y64/imgt/7y64_S_L.ann
sabdab_dataset/7y64/sequence/7y64_raw.pdb
sabdab_dataset/7y64/sequence/7y64_S_VH.fa
sabdab_dataset/7y64/sequence/7y64_S_VL.fa
sabdab_dataset/7y64/structure/7y64.pdb
sabdab_dataset/7y64/structure/chothia/7y64.pdb
false
false
train
7y65
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
03/01/23
Cryo-EM structure of C5a peptide-bound C5aR1 in complex with Gi protein
Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens
Feng, Y.Y., Zhao, C., Yan, W., Shao, Z.H.
3.2
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y65/abangle/7y65.abangle
sabdab_dataset/7y65/annotation/7y65_S_VH.ann
sabdab_dataset/7y65/annotation/7y65_S_VL.ann
sabdab_dataset/7y65/imgt/7y65_S_H.ann
sabdab_dataset/7y65/imgt/7y65_S_L.ann
sabdab_dataset/7y65/sequence/7y65_raw.pdb
sabdab_dataset/7y65/sequence/7y65_S_VH.fa
sabdab_dataset/7y65/sequence/7y65_S_VL.fa
sabdab_dataset/7y65/structure/7y65.pdb
sabdab_dataset/7y65/structure/chothia/7y65.pdb
false
false
train
7y66
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
03/01/23
Cryo-EM structure of BM213-bound C5aR1 in complex with Gi protein
Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens
Feng, Y.Y., Zhao, C., Yan, W., Shao, Z.H.
2.9
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y66/abangle/7y66.abangle
sabdab_dataset/7y66/annotation/7y66_S_VH.ann
sabdab_dataset/7y66/annotation/7y66_S_VL.ann
sabdab_dataset/7y66/imgt/7y66_S_H.ann
sabdab_dataset/7y66/imgt/7y66_S_L.ann
sabdab_dataset/7y66/sequence/7y66_raw.pdb
sabdab_dataset/7y66/sequence/7y66_S_VH.fa
sabdab_dataset/7y66/sequence/7y66_S_VL.fa
sabdab_dataset/7y66/structure/7y66.pdb
sabdab_dataset/7y66/structure/chothia/7y66.pdb
false
false
train
7y67
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
03/01/23
Cryo-EM structure of C089-bound C5aR1(I116A) mutant in complex with Gi protein
Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens
Feng, Y.Y., Zhao, C., Yan, W., Shao, Z.H.
2.8
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y67/abangle/7y67.abangle
sabdab_dataset/7y67/annotation/7y67_S_VH.ann
sabdab_dataset/7y67/annotation/7y67_S_VL.ann
sabdab_dataset/7y67/imgt/7y67_S_H.ann
sabdab_dataset/7y67/imgt/7y67_S_L.ann
sabdab_dataset/7y67/sequence/7y67_raw.pdb
sabdab_dataset/7y67/sequence/7y67_S_VH.fa
sabdab_dataset/7y67/sequence/7y67_S_VL.fa
sabdab_dataset/7y67/structure/7y67.pdb
sabdab_dataset/7y67/structure/chothia/7y67.pdb
false
false
train
7y6k
E
e
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/19/23
Cryo-EM structure of SARS-CoV-2 receptor binding domain in complex with K202.B bispecific antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Yoo, Y., Cho, H.S.
3.34
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y6k/abangle/7y6k.abangle
sabdab_dataset/7y6k/annotation/7y6k_E_VH.ann
sabdab_dataset/7y6k/annotation/7y6k_E_VL.ann
sabdab_dataset/7y6k/imgt/7y6k_E_H.ann
sabdab_dataset/7y6k/imgt/7y6k_E_L.ann
sabdab_dataset/7y6k/sequence/7y6k_raw.pdb
sabdab_dataset/7y6k/sequence/7y6k_E_VH.fa
sabdab_dataset/7y6k/sequence/7y6k_E_VL.fa
sabdab_dataset/7y6k/structure/7y6k.pdb
sabdab_dataset/7y6k/structure/chothia/7y6k.pdb
false
false
train
7y6k
J
I
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/19/23
Cryo-EM structure of SARS-CoV-2 receptor binding domain in complex with K202.B bispecific antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Yoo, Y., Cho, H.S.
3.34
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7y6k/abangle/7y6k.abangle
sabdab_dataset/7y6k/annotation/7y6k_J_VH.ann
sabdab_dataset/7y6k/annotation/7y6k_I_VL.ann
sabdab_dataset/7y6k/imgt/7y6k_J_H.ann
sabdab_dataset/7y6k/imgt/7y6k_I_L.ann
sabdab_dataset/7y6k/sequence/7y6k_raw.pdb
sabdab_dataset/7y6k/sequence/7y6k_J_VH.fa
sabdab_dataset/7y6k/sequence/7y6k_I_VL.fa
sabdab_dataset/7y6k/structure/7y6k.pdb
sabdab_dataset/7y6k/structure/chothia/7y6k.pdb
false
false
train
7y6l
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
06/21/23
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab816
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Uchikubo, T., Shirouzu, M.
3.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y6l/abangle/7y6l.abangle
sabdab_dataset/7y6l/annotation/7y6l_H_VH.ann
sabdab_dataset/7y6l/annotation/7y6l_L_VL.ann
sabdab_dataset/7y6l/imgt/7y6l_H_H.ann
sabdab_dataset/7y6l/imgt/7y6l_L_L.ann
sabdab_dataset/7y6l/sequence/7y6l_raw.pdb
sabdab_dataset/7y6l/sequence/7y6l_H_VH.fa
sabdab_dataset/7y6l/sequence/7y6l_L_VL.fa
sabdab_dataset/7y6l/structure/7y6l.pdb
sabdab_dataset/7y6l/structure/chothia/7y6l.pdb
false
false
train
7y6n
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
06/21/23
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab803
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Uchikubo, T., Shirouzu, M.
4.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/7y6n/abangle/7y6n.abangle
sabdab_dataset/7y6n/annotation/7y6n_H_VH.ann
sabdab_dataset/7y6n/annotation/7y6n_L_VL.ann
sabdab_dataset/7y6n/imgt/7y6n_H_H.ann
sabdab_dataset/7y6n/imgt/7y6n_L_L.ann
sabdab_dataset/7y6n/sequence/7y6n_raw.pdb
sabdab_dataset/7y6n/sequence/7y6n_H_VH.fa
sabdab_dataset/7y6n/sequence/7y6n_L_VL.fa
sabdab_dataset/7y6n/structure/7y6n.pdb
sabdab_dataset/7y6n/structure/chothia/7y6n.pdb
false
false
validation
7y71
O
P
0
A | C
protein | protein
NA | NA
spike glycoprotein | spike glycoprotein
VIRAL PROTEIN
08/02/23
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7
Homo sapiens
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Chia, W.N., Tan, C.W., Tan, A.W.K., Young, B., Starr, T.N., Lopez, E., Fibriansah, G., Barr, J., Cheng, S., Yeoh, A.Y.Y., Yap, W.C., Lim, B.L., Ng, T.S., Sia, W.R., Zhu, F., Chen, S., Zhang, J., Greaney, A.J., Chen, M., Au, G.G., Paradkar, P., Peiris, M., Chung, A.W., Bloom, J.D., Lye, D., Lok, S.M., Wang, L.F.
3.12
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/7y71/abangle/7y71.abangle
sabdab_dataset/7y71/annotation/7y71_O_VH.ann
sabdab_dataset/7y71/annotation/7y71_P_VL.ann
sabdab_dataset/7y71/imgt/7y71_O_H.ann
sabdab_dataset/7y71/imgt/7y71_P_L.ann
sabdab_dataset/7y71/sequence/7y71_raw.pdb
sabdab_dataset/7y71/sequence/7y71_O_VH.fa
sabdab_dataset/7y71/sequence/7y71_P_VL.fa
sabdab_dataset/7y71/structure/7y71.pdb
sabdab_dataset/7y71/structure/chothia/7y71.pdb
false
false
train
7y72
O
P
0
A | C
protein | protein
NA | NA
spike glycoprotein | spike glycoprotein
VIRAL PROTEIN
08/02/23
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7 (focused refinement on Fab-RBD interface)
Homo sapiens
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Chia, W.N., Tan, C.W., Tan, A.W.K., Young, B., Starr, T.N., Lopez, E., Fibriansah, G., Barr, J., Cheng, S., Yeoh, A.Y.Y., Yap, W.C., Lim, B.L., Ng, T.S., Sia, W.R., Zhu, F., Chen, S., Zhang, J., Greaney, A.J., Chen, M., Au, G.G., Paradkar, P., Peiris, M., Chung, A.W., Bloom, J.D., Lye, D., Lok, S.M., Wang, L.F.
4.03
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/7y72/abangle/7y72.abangle
sabdab_dataset/7y72/annotation/7y72_O_VH.ann
sabdab_dataset/7y72/annotation/7y72_P_VL.ann
sabdab_dataset/7y72/imgt/7y72_O_H.ann
sabdab_dataset/7y72/imgt/7y72_P_L.ann
sabdab_dataset/7y72/sequence/7y72_raw.pdb
sabdab_dataset/7y72/sequence/7y72_O_VH.fa
sabdab_dataset/7y72/sequence/7y72_P_VL.fa
sabdab_dataset/7y72/structure/7y72.pdb
sabdab_dataset/7y72/structure/chothia/7y72.pdb
false
false
train
7y7j
E
D
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
02/22/23
SARS-CoV-2 S trimer in complex with 1F Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhao, S., Liu, F., Yang, X., Zhong, G.
4.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7y7j/abangle/7y7j.abangle
sabdab_dataset/7y7j/annotation/7y7j_E_VH.ann
sabdab_dataset/7y7j/annotation/7y7j_D_VL.ann
sabdab_dataset/7y7j/imgt/7y7j_E_H.ann
sabdab_dataset/7y7j/imgt/7y7j_D_L.ann
sabdab_dataset/7y7j/sequence/7y7j_raw.pdb
sabdab_dataset/7y7j/sequence/7y7j_E_VH.fa
sabdab_dataset/7y7j/sequence/7y7j_D_VL.fa
sabdab_dataset/7y7j/structure/7y7j.pdb
sabdab_dataset/7y7j/structure/chothia/7y7j.pdb
false
false
train
7y7k
B
C
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
02/22/23
SARS-CoV-2 RBD in complex with 1F Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhao, S., Liu, F., Yang, X., Zhong, G.
4.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/7y7k/abangle/7y7k.abangle
sabdab_dataset/7y7k/annotation/7y7k_B_VH.ann
sabdab_dataset/7y7k/annotation/7y7k_C_VL.ann
sabdab_dataset/7y7k/imgt/7y7k_B_H.ann
sabdab_dataset/7y7k/imgt/7y7k_C_L.ann
sabdab_dataset/7y7k/sequence/7y7k_raw.pdb
sabdab_dataset/7y7k/sequence/7y7k_B_VH.fa
sabdab_dataset/7y7k/sequence/7y7k_C_VL.fa
sabdab_dataset/7y7k/structure/7y7k.pdb
sabdab_dataset/7y7k/structure/chothia/7y7k.pdb
false
false
test
7y7m
F
G
0
C | B
protein | protein
NA | NA
capsid protein vp3 | capsid protein vp2
VIRUS
08/24/22
The structure of coxsackievirus A16 mature virion in complex with Fab 8C4
Coxsackievirus A16
coxsackievirus a16
coxsackievirus a16
coxsackievirus a16 | coxsackievirus a16
Cong, Y., Liu, C.X.
3.05
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV13
Kappa
null
null
null
null
null
sabdab_dataset/7y7m/abangle/7y7m.abangle
sabdab_dataset/7y7m/annotation/7y7m_F_VH.ann
sabdab_dataset/7y7m/annotation/7y7m_G_VL.ann
sabdab_dataset/7y7m/imgt/7y7m_F_H.ann
sabdab_dataset/7y7m/imgt/7y7m_G_L.ann
sabdab_dataset/7y7m/sequence/7y7m_raw.pdb
sabdab_dataset/7y7m/sequence/7y7m_F_VH.fa
sabdab_dataset/7y7m/sequence/7y7m_G_VL.fa
sabdab_dataset/7y7m/structure/7y7m.pdb
sabdab_dataset/7y7m/structure/chothia/7y7m.pdb
false
false
validation
7y89
S
s
0
C | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
10/12/22
Structure of the GPR17-Gi complex
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens
Ye, F., Chen, G.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7y89/abangle/7y89.abangle
sabdab_dataset/7y89/annotation/7y89_S_VH.ann
sabdab_dataset/7y89/annotation/7y89_S_VL.ann
sabdab_dataset/7y89/imgt/7y89_S_H.ann
sabdab_dataset/7y89/imgt/7y89_S_L.ann
sabdab_dataset/7y89/sequence/7y89_raw.pdb
sabdab_dataset/7y89/sequence/7y89_S_VH.fa
sabdab_dataset/7y89/sequence/7y89_S_VL.fa
sabdab_dataset/7y89/structure/7y89.pdb
sabdab_dataset/7y89/structure/chothia/7y89.pdb
false
false
validation
7y8j
H
L
0
A
peptide
null
spike protein s2'
ANTIMICROBIAL PROTEIN/IMMUNE SYSTEM
07/12/23
3D1 in complex with 6-mer HR1 peptide from SARS-CoV-2
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Lei, Y.
1.03
X-RAY DIFFRACTION
0.145
0.134
false
true
IGHV7
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/7y8j/abangle/7y8j.abangle
sabdab_dataset/7y8j/annotation/7y8j_H_VH.ann
sabdab_dataset/7y8j/annotation/7y8j_L_VL.ann
sabdab_dataset/7y8j/imgt/7y8j_H_H.ann
sabdab_dataset/7y8j/imgt/7y8j_L_L.ann
sabdab_dataset/7y8j/sequence/7y8j_raw.pdb
sabdab_dataset/7y8j/sequence/7y8j_H_VH.fa
sabdab_dataset/7y8j/sequence/7y8j_L_VL.fa
sabdab_dataset/7y8j/structure/7y8j.pdb
sabdab_dataset/7y8j/structure/chothia/7y8j.pdb
true
true
test
7y9t
C
null
0
A
protein
null
auxin efflux carrier component 1
TRANSPORT PROTEIN
09/07/22
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the apo state
Arabidopsis thaliana; Escherichia coli
null
null
arabidopsis thaliana
Sun, L., Liu, X., Yang, Z., Xia, J.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7y9t/annotation/7y9t_C_VH.ann
null
sabdab_dataset/7y9t/imgt/7y9t_C_H.ann
null
sabdab_dataset/7y9t/sequence/7y9t_raw.pdb
sabdab_dataset/7y9t/sequence/7y9t_C_VH.fa
null
sabdab_dataset/7y9t/structure/7y9t.pdb
sabdab_dataset/7y9t/structure/chothia/7y9t.pdb
false
false
train
7y9t
D
null
0
B
protein
null
auxin efflux carrier component 1
TRANSPORT PROTEIN
09/07/22
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the apo state
Arabidopsis thaliana; Escherichia coli
null
null
arabidopsis thaliana
Sun, L., Liu, X., Yang, Z., Xia, J.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7y9t/annotation/7y9t_D_VH.ann
null
sabdab_dataset/7y9t/imgt/7y9t_D_H.ann
null
sabdab_dataset/7y9t/sequence/7y9t_raw.pdb
sabdab_dataset/7y9t/sequence/7y9t_D_VH.fa
null
sabdab_dataset/7y9t/structure/7y9t.pdb
sabdab_dataset/7y9t/structure/chothia/7y9t.pdb
false
false
train
7y9u
C
null
0
A
protein
null
auxin efflux carrier component 1
TRANSPORT PROTEIN
09/07/22
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the NPA-bound state
Arabidopsis thaliana; Escherichia coli
null
null
arabidopsis thaliana
Sun, L., Liu, X., Yang, Z., Xia, J.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7y9u/annotation/7y9u_C_VH.ann
null
sabdab_dataset/7y9u/imgt/7y9u_C_H.ann
null
sabdab_dataset/7y9u/sequence/7y9u_raw.pdb
sabdab_dataset/7y9u/sequence/7y9u_C_VH.fa
null
sabdab_dataset/7y9u/structure/7y9u.pdb
sabdab_dataset/7y9u/structure/chothia/7y9u.pdb
false
false
train
7y9u
D
null
0
B
protein
null
auxin efflux carrier component 1
TRANSPORT PROTEIN
09/07/22
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the NPA-bound state
Arabidopsis thaliana; Escherichia coli
null
null
arabidopsis thaliana
Sun, L., Liu, X., Yang, Z., Xia, J.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7y9u/annotation/7y9u_D_VH.ann
null
sabdab_dataset/7y9u/imgt/7y9u_D_H.ann
null
sabdab_dataset/7y9u/sequence/7y9u_raw.pdb
sabdab_dataset/7y9u/sequence/7y9u_D_VH.fa
null
sabdab_dataset/7y9u/structure/7y9u.pdb
sabdab_dataset/7y9u/structure/chothia/7y9u.pdb
false
false
validation
7y9v
C
null
0
A
protein
null
auxin efflux carrier component 1
TRANSPORT PROTEIN
09/07/22
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the IAA-bound state
Arabidopsis thaliana; Escherichia coli
null
null
arabidopsis thaliana
Sun, L., Liu, X., Yang, Z., Xia, J.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7y9v/annotation/7y9v_C_VH.ann
null
sabdab_dataset/7y9v/imgt/7y9v_C_H.ann
null
sabdab_dataset/7y9v/sequence/7y9v_raw.pdb
sabdab_dataset/7y9v/sequence/7y9v_C_VH.fa
null
sabdab_dataset/7y9v/structure/7y9v.pdb
sabdab_dataset/7y9v/structure/chothia/7y9v.pdb
false
false
train
7y9v
D
null
0
B
protein
null
auxin efflux carrier component 1
TRANSPORT PROTEIN
09/07/22
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the IAA-bound state
Arabidopsis thaliana; Escherichia coli
null
null
arabidopsis thaliana
Sun, L., Liu, X., Yang, Z., Xia, J.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7y9v/annotation/7y9v_D_VH.ann
null
sabdab_dataset/7y9v/imgt/7y9v_D_H.ann
null
sabdab_dataset/7y9v/sequence/7y9v_raw.pdb
sabdab_dataset/7y9v/sequence/7y9v_D_VH.fa
null
sabdab_dataset/7y9v/structure/7y9v.pdb
sabdab_dataset/7y9v/structure/chothia/7y9v.pdb
false
false
train
7yac
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
04/19/23
Paltusotine-bound SSTR2-Gi complex
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens
Zhao, J., Shao, Z.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7yac/abangle/7yac.abangle
sabdab_dataset/7yac/annotation/7yac_S_VH.ann
sabdab_dataset/7yac/annotation/7yac_S_VL.ann
sabdab_dataset/7yac/imgt/7yac_S_H.ann
sabdab_dataset/7yac/imgt/7yac_S_L.ann
sabdab_dataset/7yac/sequence/7yac_raw.pdb
sabdab_dataset/7yac/sequence/7yac_S_VH.fa
sabdab_dataset/7yac/sequence/7yac_S_VL.fa
sabdab_dataset/7yac/structure/7yac.pdb
sabdab_dataset/7yac/structure/chothia/7yac.pdb
false
false
train
7yad
A
B
0
M
protein
null
spike protein s1
IMMUNE SYSTEM/VIRAL PROTEIN
08/31/22
Cryo-EM structure of S309-RBD-RBD-S309 in the S309-bound Omicron spike protein (local refinement)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhao, Z.N., Xie, Y.F., Qi, J.X., Gao, F.
2.66
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7yad/abangle/7yad.abangle
sabdab_dataset/7yad/annotation/7yad_A_VH.ann
sabdab_dataset/7yad/annotation/7yad_B_VL.ann
sabdab_dataset/7yad/imgt/7yad_A_H.ann
sabdab_dataset/7yad/imgt/7yad_B_L.ann
sabdab_dataset/7yad/sequence/7yad_raw.pdb
sabdab_dataset/7yad/sequence/7yad_A_VH.fa
sabdab_dataset/7yad/sequence/7yad_B_VL.fa
sabdab_dataset/7yad/structure/7yad.pdb
sabdab_dataset/7yad/structure/chothia/7yad.pdb
false
false
test
7yad
C
D
0
E
protein
null
spike protein s1
IMMUNE SYSTEM/VIRAL PROTEIN
08/31/22
Cryo-EM structure of S309-RBD-RBD-S309 in the S309-bound Omicron spike protein (local refinement)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhao, Z.N., Xie, Y.F., Qi, J.X., Gao, F.
2.66
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/7yad/abangle/7yad.abangle
sabdab_dataset/7yad/annotation/7yad_C_VH.ann
sabdab_dataset/7yad/annotation/7yad_D_VL.ann
sabdab_dataset/7yad/imgt/7yad_C_H.ann
sabdab_dataset/7yad/imgt/7yad_D_L.ann
sabdab_dataset/7yad/sequence/7yad_raw.pdb
sabdab_dataset/7yad/sequence/7yad_C_VH.fa
sabdab_dataset/7yad/sequence/7yad_D_VL.fa
sabdab_dataset/7yad/structure/7yad.pdb
sabdab_dataset/7yad/structure/chothia/7yad.pdb
false
false
validation
7yae
S
s
0
A | C | B
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
04/19/23
Octreotide-bound SSTR2-Gi complex
Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens | homo sapiens
Zhao, J., Shao, Z.
0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/7yae/abangle/7yae.abangle
sabdab_dataset/7yae/annotation/7yae_S_VH.ann
sabdab_dataset/7yae/annotation/7yae_S_VL.ann
sabdab_dataset/7yae/imgt/7yae_S_H.ann
sabdab_dataset/7yae/imgt/7yae_S_L.ann
sabdab_dataset/7yae/sequence/7yae_raw.pdb
sabdab_dataset/7yae/sequence/7yae_S_VH.fa
sabdab_dataset/7yae/sequence/7yae_S_VL.fa
sabdab_dataset/7yae/structure/7yae.pdb
sabdab_dataset/7yae/structure/chothia/7yae.pdb
false
false
test
7yag
C
null
0
A
protein
null
calcium-transporting atpase type 2c member 1
TRANSPORT PROTEIN
03/22/23
CryoEM structure of SPCA1a in E1-Ca-AMPPCP state subclass 1
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Chen, Z., Watanabe, S., Inaba, K.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7yag/annotation/7yag_C_VH.ann
null
sabdab_dataset/7yag/imgt/7yag_C_H.ann
null
sabdab_dataset/7yag/sequence/7yag_raw.pdb
sabdab_dataset/7yag/sequence/7yag_C_VH.fa
null
sabdab_dataset/7yag/structure/7yag.pdb
sabdab_dataset/7yag/structure/chothia/7yag.pdb
false
false
train
7yah
C
null
0
A
protein
null
calcium-transporting atpase type 2c member 1
TRANSPORT PROTEIN
03/22/23
CryoEM structure of SPCA1a in E1-Ca-AMPPCP state subclass 2
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Chen, Z., Watanabe, S., Inaba, K.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7yah/annotation/7yah_C_VH.ann
null
sabdab_dataset/7yah/imgt/7yah_C_H.ann
null
sabdab_dataset/7yah/sequence/7yah_raw.pdb
sabdab_dataset/7yah/sequence/7yah_C_VH.fa
null
sabdab_dataset/7yah/structure/7yah.pdb
sabdab_dataset/7yah/structure/chothia/7yah.pdb
false
false
train
7yai
C
null
0
A
protein
null
calcium-transporting atpase type 2c member 1
TRANSPORT PROTEIN
03/22/23
CryoEM structure of SPCA1a in E1-Ca-AMPPCP state subclass 3
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Chen, Z., Watanabe, S., Inaba, K.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7yai/annotation/7yai_C_VH.ann
null
sabdab_dataset/7yai/imgt/7yai_C_H.ann
null
sabdab_dataset/7yai/sequence/7yai_raw.pdb
sabdab_dataset/7yai/sequence/7yai_C_VH.fa
null
sabdab_dataset/7yai/structure/7yai.pdb
sabdab_dataset/7yai/structure/chothia/7yai.pdb
false
false
train
7yaj
C
null
0
A
protein
null
calcium-transporting atpase type 2c member 1
TRANSPORT PROTEIN
03/22/23
CryoEM structure of SPCA1a in E1-Mn-AMPPCP state subclass 1
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Chen, Z., Watanabe, S., Inaba, K.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/7yaj/annotation/7yaj_C_VH.ann
null
sabdab_dataset/7yaj/imgt/7yaj_C_H.ann
null
sabdab_dataset/7yaj/sequence/7yaj_raw.pdb
sabdab_dataset/7yaj/sequence/7yaj_C_VH.fa
null
sabdab_dataset/7yaj/structure/7yaj.pdb
sabdab_dataset/7yaj/structure/chothia/7yaj.pdb
false
false
train
7yar
G
H
0
A
protein
null
e protein
VIRUS
01/04/23
ZIKV_Fab_G9E
Homo sapiens; Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013
homo sapiens
homo sapiens
zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013
Shu, B., Thiam-Seng, N., Lok, S.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/7yar/abangle/7yar.abangle
sabdab_dataset/7yar/annotation/7yar_G_VH.ann
sabdab_dataset/7yar/annotation/7yar_H_VL.ann
sabdab_dataset/7yar/imgt/7yar_G_H.ann
sabdab_dataset/7yar/imgt/7yar_H_L.ann
sabdab_dataset/7yar/sequence/7yar_raw.pdb
sabdab_dataset/7yar/sequence/7yar_G_VH.fa
sabdab_dataset/7yar/sequence/7yar_H_VL.fa
sabdab_dataset/7yar/structure/7yar.pdb
sabdab_dataset/7yar/structure/chothia/7yar.pdb
false
false
train
7yar
I
M
0
C
protein
null
e protein
VIRUS
01/04/23
ZIKV_Fab_G9E
Homo sapiens; Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013
homo sapiens
homo sapiens
zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013
Shu, B., Thiam-Seng, N., Lok, S.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/7yar/abangle/7yar.abangle
sabdab_dataset/7yar/annotation/7yar_I_VH.ann
sabdab_dataset/7yar/annotation/7yar_M_VL.ann
sabdab_dataset/7yar/imgt/7yar_I_H.ann
sabdab_dataset/7yar/imgt/7yar_M_L.ann
sabdab_dataset/7yar/sequence/7yar_raw.pdb
sabdab_dataset/7yar/sequence/7yar_I_VH.fa
sabdab_dataset/7yar/sequence/7yar_M_VL.fa
sabdab_dataset/7yar/structure/7yar.pdb
sabdab_dataset/7yar/structure/chothia/7yar.pdb
false
false
train
7yar
K
L
0
B
protein
null
e protein
VIRUS
01/04/23
ZIKV_Fab_G9E
Homo sapiens; Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013
homo sapiens
homo sapiens
zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013
Shu, B., Thiam-Seng, N., Lok, S.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/7yar/abangle/7yar.abangle
sabdab_dataset/7yar/annotation/7yar_K_VH.ann
sabdab_dataset/7yar/annotation/7yar_L_VL.ann
sabdab_dataset/7yar/imgt/7yar_K_H.ann
sabdab_dataset/7yar/imgt/7yar_L_L.ann
sabdab_dataset/7yar/sequence/7yar_raw.pdb
sabdab_dataset/7yar/sequence/7yar_K_VH.fa
sabdab_dataset/7yar/sequence/7yar_L_VL.fa
sabdab_dataset/7yar/structure/7yar.pdb
sabdab_dataset/7yar/structure/chothia/7yar.pdb
false
false
train
7yc5
D
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/05/23
Cryo-EM structure of SARS-CoV-2 spike in complex with K202.B bispecific antibody
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Yoo, Y., Cho, H.S.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/7yc5/annotation/7yc5_D_VH.ann
null
sabdab_dataset/7yc5/imgt/7yc5_D_H.ann
null
sabdab_dataset/7yc5/sequence/7yc5_raw.pdb
sabdab_dataset/7yc5/sequence/7yc5_D_VH.fa
null
sabdab_dataset/7yc5/structure/7yc5.pdb
sabdab_dataset/7yc5/structure/chothia/7yc5.pdb
false
false
train