pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
365 values
r_factor
stringclasses
358 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
abangle
stringlengths
40
40
annotation_H
stringlengths
44
44
annotation_L
stringlengths
44
44
imgt_H
stringlengths
37
37
imgt_L
stringlengths
37
37
sequence_raw
stringlengths
41
41
sequence_H
stringlengths
41
41
sequence_L
stringlengths
41
41
structure
stringlengths
38
38
structure_chothia
stringlengths
46
46
in_nr_set
bool
2 classes
curated_quality_dataset
bool
2 classes
split
stringclasses
3 values
8gkj
C
D
0
null
null
null
null
IMMUNE SYSTEM
03/20/24
Crystal Structure of the Murine MUC16 Specific Antibody AR9.6
Mus musculus
mus musculus
mus musculus
null
Brooks, C.L., Aguilar, E.N.
1.9
X-RAY DIFFRACTION
0.219
0.182
false
true
IGHV5
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8gkj/abangle/8gkj.abangle
sabdab_dataset/8gkj/annotation/8gkj_C_VH.ann
sabdab_dataset/8gkj/annotation/8gkj_D_VL.ann
sabdab_dataset/8gkj/imgt/8gkj_C_H.ann
sabdab_dataset/8gkj/imgt/8gkj_D_L.ann
sabdab_dataset/8gkj/sequence/8gkj_raw.pdb
sabdab_dataset/8gkj/sequence/8gkj_C_VH.fa
sabdab_dataset/8gkj/sequence/8gkj_D_VL.fa
sabdab_dataset/8gkj/structure/8gkj.pdb
sabdab_dataset/8gkj/structure/chothia/8gkj.pdb
true
false
train
8gkk
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/20/24
Crystal Structure of the Humanized MUC16 Specific Antibody huAR9.6
Homo sapiens
homo sapiens
homo sapiens
null
Brooks, C.L., Murray, B.
1.75
X-RAY DIFFRACTION
0.192
0.167
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8gkk/abangle/8gkk.abangle
sabdab_dataset/8gkk/annotation/8gkk_H_VH.ann
sabdab_dataset/8gkk/annotation/8gkk_L_VL.ann
sabdab_dataset/8gkk/imgt/8gkk_H_H.ann
sabdab_dataset/8gkk/imgt/8gkk_L_L.ann
sabdab_dataset/8gkk/sequence/8gkk_raw.pdb
sabdab_dataset/8gkk/sequence/8gkk_H_VH.fa
sabdab_dataset/8gkk/sequence/8gkk_L_VL.fa
sabdab_dataset/8gkk/structure/8gkk.pdb
sabdab_dataset/8gkk/structure/chothia/8gkk.pdb
true
false
train
8gkl
H
L
0
E
protein
null
mucin-16
IMMUNE SYSTEM
03/20/24
Crystal Structure of the Humanized MUC16 Specific Antibody huAR9.6
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens
Brooks, C.L., Aguilar, E.N.
2.6
X-RAY DIFFRACTION
0.269
0.215
false
true
IGHV5
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8gkl/abangle/8gkl.abangle
sabdab_dataset/8gkl/annotation/8gkl_H_VH.ann
sabdab_dataset/8gkl/annotation/8gkl_L_VL.ann
sabdab_dataset/8gkl/imgt/8gkl_H_H.ann
sabdab_dataset/8gkl/imgt/8gkl_L_L.ann
sabdab_dataset/8gkl/sequence/8gkl_raw.pdb
sabdab_dataset/8gkl/sequence/8gkl_H_VH.fa
sabdab_dataset/8gkl/sequence/8gkl_L_VL.fa
sabdab_dataset/8gkl/structure/8gkl.pdb
sabdab_dataset/8gkl/structure/chothia/8gkl.pdb
false
false
test
8gng
H
L
0
A
protein
null
adenosine receptor a2a
MEMBRANE PROTEIN/IMMUNE SYSTEM
03/22/23
Crystal structure of human adenosine A2A receptor in complex with istradefylline.
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens
Suzuki, M., Saito, J., Miyagi, H., Yasunaga, M.
3.2
X-RAY DIFFRACTION
0.277
0.218
false
false
IGHV1
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/8gng/abangle/8gng.abangle
sabdab_dataset/8gng/annotation/8gng_H_VH.ann
sabdab_dataset/8gng/annotation/8gng_L_VL.ann
sabdab_dataset/8gng/imgt/8gng_H_H.ann
sabdab_dataset/8gng/imgt/8gng_L_L.ann
sabdab_dataset/8gng/sequence/8gng_raw.pdb
sabdab_dataset/8gng/sequence/8gng_H_VH.fa
sabdab_dataset/8gng/sequence/8gng_L_VL.fa
sabdab_dataset/8gng/structure/8gng.pdb
sabdab_dataset/8gng/structure/chothia/8gng.pdb
true
false
validation
8gng
Z
Y
0
X
protein
null
adenosine receptor a2a
MEMBRANE PROTEIN/IMMUNE SYSTEM
03/22/23
Crystal structure of human adenosine A2A receptor in complex with istradefylline.
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens
Suzuki, M., Saito, J., Miyagi, H., Yasunaga, M.
3.2
X-RAY DIFFRACTION
0.277
0.218
false
false
IGHV1
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/8gng/abangle/8gng.abangle
sabdab_dataset/8gng/annotation/8gng_Z_VH.ann
sabdab_dataset/8gng/annotation/8gng_Y_VL.ann
sabdab_dataset/8gng/imgt/8gng_Z_H.ann
sabdab_dataset/8gng/imgt/8gng_Y_L.ann
sabdab_dataset/8gng/sequence/8gng_raw.pdb
sabdab_dataset/8gng/sequence/8gng_Z_VH.fa
sabdab_dataset/8gng/sequence/8gng_Y_VL.fa
sabdab_dataset/8gng/structure/8gng.pdb
sabdab_dataset/8gng/structure/chothia/8gng.pdb
true
false
train
8gnh
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
08/30/23
Complex structure of BD-218 and Spike protein
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, B., Xu, H., Su, X.D.
3.74
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8gnh/abangle/8gnh.abangle
sabdab_dataset/8gnh/annotation/8gnh_H_VH.ann
sabdab_dataset/8gnh/annotation/8gnh_L_VL.ann
sabdab_dataset/8gnh/imgt/8gnh_H_H.ann
sabdab_dataset/8gnh/imgt/8gnh_L_L.ann
sabdab_dataset/8gnh/sequence/8gnh_raw.pdb
sabdab_dataset/8gnh/sequence/8gnh_H_VH.fa
sabdab_dataset/8gnh/sequence/8gnh_L_VL.fa
sabdab_dataset/8gnh/structure/8gnh.pdb
sabdab_dataset/8gnh/structure/chothia/8gnh.pdb
false
false
train
8gni
C
null
0
A
protein
null
nad(+) hydrolase sarm1
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, Conformation 1
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gni/annotation/8gni_C_VH.ann
null
sabdab_dataset/8gni/imgt/8gni_C_H.ann
null
sabdab_dataset/8gni/sequence/8gni_raw.pdb
sabdab_dataset/8gni/sequence/8gni_C_VH.fa
null
sabdab_dataset/8gni/structure/8gni.pdb
sabdab_dataset/8gni/structure/chothia/8gni.pdb
false
false
validation
8gnj
C
null
0
A
protein
null
nad(+) hydrolase sarm1
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, Conformation 2
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gnj/annotation/8gnj_C_VH.ann
null
sabdab_dataset/8gnj/imgt/8gnj_C_H.ann
null
sabdab_dataset/8gnj/sequence/8gnj_raw.pdb
sabdab_dataset/8gnj/sequence/8gnj_C_VH.fa
null
sabdab_dataset/8gnj/structure/8gnj.pdb
sabdab_dataset/8gnj/structure/chothia/8gnj.pdb
false
false
train
8gnk
H
L
0
A
protein
null
sodium- and chloride-dependent gaba transporter 1
MEMBRANE PROTEIN
05/31/23
CryoEM structure of cytosol-facing, substrate-bound ratGAT1
Mus musculus; Rattus norvegicus
mus musculus
mus musculus
rattus norvegicus
Nayak, S.R., Joseph, D., Penmatsa, A.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/8gnk/abangle/8gnk.abangle
sabdab_dataset/8gnk/annotation/8gnk_H_VH.ann
sabdab_dataset/8gnk/annotation/8gnk_L_VL.ann
sabdab_dataset/8gnk/imgt/8gnk_H_H.ann
sabdab_dataset/8gnk/imgt/8gnk_L_L.ann
sabdab_dataset/8gnk/sequence/8gnk_raw.pdb
sabdab_dataset/8gnk/sequence/8gnk_H_VH.fa
sabdab_dataset/8gnk/sequence/8gnk_L_VL.fa
sabdab_dataset/8gnk/structure/8gnk.pdb
sabdab_dataset/8gnk/structure/chothia/8gnk.pdb
false
false
test
8go8
H
L
0
A | V
protein | peptide
NA | NA
beta-arrestin-1 | c5a anaphylatoxin chemotactic receptor 1
SIGNALING PROTEIN/IMMUNE SYSTEM
05/17/23
Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1
Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
rattus norvegicus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
3.41
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8go8/abangle/8go8.abangle
sabdab_dataset/8go8/annotation/8go8_H_VH.ann
sabdab_dataset/8go8/annotation/8go8_L_VL.ann
sabdab_dataset/8go8/imgt/8go8_H_H.ann
sabdab_dataset/8go8/imgt/8go8_L_L.ann
sabdab_dataset/8go8/sequence/8go8_raw.pdb
sabdab_dataset/8go8/sequence/8go8_H_VH.fa
sabdab_dataset/8go8/sequence/8go8_L_VL.fa
sabdab_dataset/8go8/structure/8go8.pdb
sabdab_dataset/8go8/structure/chothia/8go8.pdb
false
false
train
8go8
I
M
0
B | U
protein | peptide
NA | NA
beta-arrestin-1 | c5a anaphylatoxin chemotactic receptor 1
SIGNALING PROTEIN/IMMUNE SYSTEM
05/17/23
Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1
Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
rattus norvegicus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
3.41
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8go8/abangle/8go8.abangle
sabdab_dataset/8go8/annotation/8go8_I_VH.ann
sabdab_dataset/8go8/annotation/8go8_M_VL.ann
sabdab_dataset/8go8/imgt/8go8_I_H.ann
sabdab_dataset/8go8/imgt/8go8_M_L.ann
sabdab_dataset/8go8/sequence/8go8_raw.pdb
sabdab_dataset/8go8/sequence/8go8_I_VH.fa
sabdab_dataset/8go8/sequence/8go8_M_VL.fa
sabdab_dataset/8go8/structure/8go8.pdb
sabdab_dataset/8go8/structure/chothia/8go8.pdb
false
false
train
8go9
B
C
0
F | H
protein | peptide
NA | NA
beta-arrestin-2 | atypical chemokine receptor 2
SIGNALING PROTEIN/IMMUNE SYSTEM
12/27/23
Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Atypical chemokine receptor 2, ACKR2 (D6R)
Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
bos taurus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
3.35
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8go9/abangle/8go9.abangle
sabdab_dataset/8go9/annotation/8go9_B_VH.ann
sabdab_dataset/8go9/annotation/8go9_C_VL.ann
sabdab_dataset/8go9/imgt/8go9_B_H.ann
sabdab_dataset/8go9/imgt/8go9_C_L.ann
sabdab_dataset/8go9/sequence/8go9_raw.pdb
sabdab_dataset/8go9/sequence/8go9_B_VH.fa
sabdab_dataset/8go9/sequence/8go9_C_VL.fa
sabdab_dataset/8go9/structure/8go9.pdb
sabdab_dataset/8go9/structure/chothia/8go9.pdb
false
false
train
8go9
D
E
0
A | G
protein | peptide
NA | NA
beta-arrestin-2 | atypical chemokine receptor 2
SIGNALING PROTEIN/IMMUNE SYSTEM
12/27/23
Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Atypical chemokine receptor 2, ACKR2 (D6R)
Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
bos taurus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
3.35
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8go9/abangle/8go9.abangle
sabdab_dataset/8go9/annotation/8go9_D_VH.ann
sabdab_dataset/8go9/annotation/8go9_E_VL.ann
sabdab_dataset/8go9/imgt/8go9_D_H.ann
sabdab_dataset/8go9/imgt/8go9_E_L.ann
sabdab_dataset/8go9/sequence/8go9_raw.pdb
sabdab_dataset/8go9/sequence/8go9_D_VH.fa
sabdab_dataset/8go9/sequence/8go9_E_VL.fa
sabdab_dataset/8go9/structure/8go9.pdb
sabdab_dataset/8go9/structure/chothia/8go9.pdb
false
false
train
8goc
D
E
0
A | G
protein | peptide
NA | NA
beta-arrestin-2 | vasopressin v2 receptor
SIGNALING PROTEIN/IMMUNE SYSTEM
05/17/23
Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Vasopressin V2 receptor, V2R
Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
bos taurus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
4.18
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8goc/abangle/8goc.abangle
sabdab_dataset/8goc/annotation/8goc_D_VH.ann
sabdab_dataset/8goc/annotation/8goc_E_VL.ann
sabdab_dataset/8goc/imgt/8goc_D_H.ann
sabdab_dataset/8goc/imgt/8goc_E_L.ann
sabdab_dataset/8goc/sequence/8goc_raw.pdb
sabdab_dataset/8goc/sequence/8goc_D_VH.fa
sabdab_dataset/8goc/sequence/8goc_E_VL.fa
sabdab_dataset/8goc/structure/8goc.pdb
sabdab_dataset/8goc/structure/chothia/8goc.pdb
false
false
train
8goc
H
L
0
B | U
protein | peptide
NA | NA
beta-arrestin-2 | vasopressin v2 receptor
SIGNALING PROTEIN/IMMUNE SYSTEM
05/17/23
Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Vasopressin V2 receptor, V2R
Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
bos taurus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
4.18
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8goc/abangle/8goc.abangle
sabdab_dataset/8goc/annotation/8goc_H_VH.ann
sabdab_dataset/8goc/annotation/8goc_L_VL.ann
sabdab_dataset/8goc/imgt/8goc_H_H.ann
sabdab_dataset/8goc/imgt/8goc_L_L.ann
sabdab_dataset/8goc/sequence/8goc_raw.pdb
sabdab_dataset/8goc/sequence/8goc_H_VH.fa
sabdab_dataset/8goc/sequence/8goc_L_VL.fa
sabdab_dataset/8goc/structure/8goc.pdb
sabdab_dataset/8goc/structure/chothia/8goc.pdb
false
false
train
8goc
M
N
0
C | V
protein | peptide
NA | NA
beta-arrestin-2 | vasopressin v2 receptor
SIGNALING PROTEIN/IMMUNE SYSTEM
05/17/23
Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Vasopressin V2 receptor, V2R
Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
bos taurus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
4.18
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8goc/abangle/8goc.abangle
sabdab_dataset/8goc/annotation/8goc_M_VH.ann
sabdab_dataset/8goc/annotation/8goc_N_VL.ann
sabdab_dataset/8goc/imgt/8goc_M_H.ann
sabdab_dataset/8goc/imgt/8goc_N_L.ann
sabdab_dataset/8goc/sequence/8goc_raw.pdb
sabdab_dataset/8goc/sequence/8goc_M_VH.fa
sabdab_dataset/8goc/sequence/8goc_N_VL.fa
sabdab_dataset/8goc/structure/8goc.pdb
sabdab_dataset/8goc/structure/chothia/8goc.pdb
false
false
validation
8goo
D
E
0
A | G
protein | peptide
NA | NA
beta-arrestin-2 | c5a anaphylatoxin chemotactic receptor 1
SIGNALING PROTEIN
05/17/23
Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1
Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
bos taurus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
4.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8goo/abangle/8goo.abangle
sabdab_dataset/8goo/annotation/8goo_D_VH.ann
sabdab_dataset/8goo/annotation/8goo_E_VL.ann
sabdab_dataset/8goo/imgt/8goo_D_H.ann
sabdab_dataset/8goo/imgt/8goo_E_L.ann
sabdab_dataset/8goo/sequence/8goo_raw.pdb
sabdab_dataset/8goo/sequence/8goo_D_VH.fa
sabdab_dataset/8goo/sequence/8goo_E_VL.fa
sabdab_dataset/8goo/structure/8goo.pdb
sabdab_dataset/8goo/structure/chothia/8goo.pdb
false
false
train
8goo
H
L
0
B | U
protein | peptide
NA | NA
beta-arrestin-2 | c5a anaphylatoxin chemotactic receptor 1
SIGNALING PROTEIN
05/17/23
Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1
Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
bos taurus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
4.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8goo/abangle/8goo.abangle
sabdab_dataset/8goo/annotation/8goo_H_VH.ann
sabdab_dataset/8goo/annotation/8goo_L_VL.ann
sabdab_dataset/8goo/imgt/8goo_H_H.ann
sabdab_dataset/8goo/imgt/8goo_L_L.ann
sabdab_dataset/8goo/sequence/8goo_raw.pdb
sabdab_dataset/8goo/sequence/8goo_H_VH.fa
sabdab_dataset/8goo/sequence/8goo_L_VL.fa
sabdab_dataset/8goo/structure/8goo.pdb
sabdab_dataset/8goo/structure/chothia/8goo.pdb
false
false
train
8goo
M
N
0
C | V
protein | peptide
NA | NA
beta-arrestin-2 | c5a anaphylatoxin chemotactic receptor 1
SIGNALING PROTEIN
05/17/23
Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1
Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
bos taurus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
4.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8goo/abangle/8goo.abangle
sabdab_dataset/8goo/annotation/8goo_M_VH.ann
sabdab_dataset/8goo/annotation/8goo_N_VL.ann
sabdab_dataset/8goo/imgt/8goo_M_H.ann
sabdab_dataset/8goo/imgt/8goo_N_L.ann
sabdab_dataset/8goo/sequence/8goo_raw.pdb
sabdab_dataset/8goo/sequence/8goo_M_VH.fa
sabdab_dataset/8goo/sequence/8goo_N_VL.fa
sabdab_dataset/8goo/structure/8goo.pdb
sabdab_dataset/8goo/structure/chothia/8goo.pdb
false
false
train
8gou
H
K
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH003 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gou/abangle/8gou.abangle
sabdab_dataset/8gou/annotation/8gou_H_VH.ann
sabdab_dataset/8gou/annotation/8gou_K_VL.ann
sabdab_dataset/8gou/imgt/8gou_H_H.ann
sabdab_dataset/8gou/imgt/8gou_K_L.ann
sabdab_dataset/8gou/sequence/8gou_raw.pdb
sabdab_dataset/8gou/sequence/8gou_H_VH.fa
sabdab_dataset/8gou/sequence/8gou_K_VL.fa
sabdab_dataset/8gou/structure/8gou.pdb
sabdab_dataset/8gou/structure/chothia/8gou.pdb
false
false
train
8gou
I
J
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH003 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gou/abangle/8gou.abangle
sabdab_dataset/8gou/annotation/8gou_I_VH.ann
sabdab_dataset/8gou/annotation/8gou_J_VL.ann
sabdab_dataset/8gou/imgt/8gou_I_H.ann
sabdab_dataset/8gou/imgt/8gou_J_L.ann
sabdab_dataset/8gou/sequence/8gou_raw.pdb
sabdab_dataset/8gou/sequence/8gou_I_VH.fa
sabdab_dataset/8gou/sequence/8gou_J_VL.fa
sabdab_dataset/8gou/structure/8gou.pdb
sabdab_dataset/8gou/structure/chothia/8gou.pdb
false
false
train
8gp3
H
L
0
A | V
protein | peptide
NA | NA
beta-arrestin-1 | c-x-c chemokine receptor type 4
SIGNALING PROTEIN
05/17/23
Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C-X-C chemokine receptor type 4, CXCR4
Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
rattus norvegicus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
4.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gp3/abangle/8gp3.abangle
sabdab_dataset/8gp3/annotation/8gp3_H_VH.ann
sabdab_dataset/8gp3/annotation/8gp3_L_VL.ann
sabdab_dataset/8gp3/imgt/8gp3_H_H.ann
sabdab_dataset/8gp3/imgt/8gp3_L_L.ann
sabdab_dataset/8gp3/sequence/8gp3_raw.pdb
sabdab_dataset/8gp3/sequence/8gp3_H_VH.fa
sabdab_dataset/8gp3/sequence/8gp3_L_VL.fa
sabdab_dataset/8gp3/structure/8gp3.pdb
sabdab_dataset/8gp3/structure/chothia/8gp3.pdb
false
false
train
8gp3
I
M
0
B | U
protein | peptide
NA | NA
beta-arrestin-1 | c-x-c chemokine receptor type 4
SIGNALING PROTEIN
05/17/23
Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C-X-C chemokine receptor type 4, CXCR4
Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
rattus norvegicus | homo sapiens
Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
4.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gp3/abangle/8gp3.abangle
sabdab_dataset/8gp3/annotation/8gp3_I_VH.ann
sabdab_dataset/8gp3/annotation/8gp3_M_VL.ann
sabdab_dataset/8gp3/imgt/8gp3_I_H.ann
sabdab_dataset/8gp3/imgt/8gp3_M_L.ann
sabdab_dataset/8gp3/sequence/8gp3_raw.pdb
sabdab_dataset/8gp3/sequence/8gp3_I_VH.fa
sabdab_dataset/8gp3/sequence/8gp3_M_VL.fa
sabdab_dataset/8gp3/structure/8gp3.pdb
sabdab_dataset/8gp3/structure/chothia/8gp3.pdb
false
false
train
8gp5
E
F
0
X
protein
null
x18 ufo env protomer
VIRAL PROTEIN
08/09/23
Structure of X18 UFO protomer in complex with F6 Fab VHVL domain
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Niu, J., Xu, Y.W., Yang, B.
4.05
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/8gp5/abangle/8gp5.abangle
sabdab_dataset/8gp5/annotation/8gp5_E_VH.ann
sabdab_dataset/8gp5/annotation/8gp5_F_VL.ann
sabdab_dataset/8gp5/imgt/8gp5_E_H.ann
sabdab_dataset/8gp5/imgt/8gp5_F_L.ann
sabdab_dataset/8gp5/sequence/8gp5_raw.pdb
sabdab_dataset/8gp5/sequence/8gp5_E_VH.fa
sabdab_dataset/8gp5/sequence/8gp5_F_VL.fa
sabdab_dataset/8gp5/structure/8gp5.pdb
sabdab_dataset/8gp5/structure/chothia/8gp5.pdb
false
false
validation
8gpg
A
B
0
Z
protein
null
hiv-1 env x18 ufo
VIRAL PROTEIN
08/09/23
HIV-1 Env X18 UFO in complex with F6 Fab
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Niu, J., Xu, Y.W., Yang, B.
4.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/8gpg/abangle/8gpg.abangle
sabdab_dataset/8gpg/annotation/8gpg_A_VH.ann
sabdab_dataset/8gpg/annotation/8gpg_B_VL.ann
sabdab_dataset/8gpg/imgt/8gpg_A_H.ann
sabdab_dataset/8gpg/imgt/8gpg_B_L.ann
sabdab_dataset/8gpg/sequence/8gpg_raw.pdb
sabdab_dataset/8gpg/sequence/8gpg_A_VH.fa
sabdab_dataset/8gpg/sequence/8gpg_B_VL.fa
sabdab_dataset/8gpg/structure/8gpg.pdb
sabdab_dataset/8gpg/structure/chothia/8gpg.pdb
false
false
test
8gpg
C
D
0
Y
protein
null
hiv-1 env x18 ufo
VIRAL PROTEIN
08/09/23
HIV-1 Env X18 UFO in complex with F6 Fab
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Niu, J., Xu, Y.W., Yang, B.
4.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/8gpg/abangle/8gpg.abangle
sabdab_dataset/8gpg/annotation/8gpg_C_VH.ann
sabdab_dataset/8gpg/annotation/8gpg_D_VL.ann
sabdab_dataset/8gpg/imgt/8gpg_C_H.ann
sabdab_dataset/8gpg/imgt/8gpg_D_L.ann
sabdab_dataset/8gpg/sequence/8gpg_raw.pdb
sabdab_dataset/8gpg/sequence/8gpg_C_VH.fa
sabdab_dataset/8gpg/sequence/8gpg_D_VL.fa
sabdab_dataset/8gpg/structure/8gpg.pdb
sabdab_dataset/8gpg/structure/chothia/8gpg.pdb
false
false
train
8gpg
E
F
0
X
protein
null
hiv-1 env x18 ufo
VIRAL PROTEIN
08/09/23
HIV-1 Env X18 UFO in complex with F6 Fab
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Niu, J., Xu, Y.W., Yang, B.
4.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/8gpg/abangle/8gpg.abangle
sabdab_dataset/8gpg/annotation/8gpg_E_VH.ann
sabdab_dataset/8gpg/annotation/8gpg_F_VL.ann
sabdab_dataset/8gpg/imgt/8gpg_E_H.ann
sabdab_dataset/8gpg/imgt/8gpg_F_L.ann
sabdab_dataset/8gpg/sequence/8gpg_raw.pdb
sabdab_dataset/8gpg/sequence/8gpg_E_VH.fa
sabdab_dataset/8gpg/sequence/8gpg_F_VL.fa
sabdab_dataset/8gpg/structure/8gpg.pdb
sabdab_dataset/8gpg/structure/chothia/8gpg.pdb
false
false
validation
8gpi
A
C
0
Z | T
protein | protein
NA | NA
x18 ufo gp41 | x18 ufo gp41
VIRAL PROTEIN
01/08/09
HIV-1 Env X18 UFO in complex with 8ANC195 Fab
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1 | human immunodeficiency virus 1
Niu, J., Xu, Y.W., Yang, B.
3.0
ELECTRON MICROSCOPY
null
null
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gpi/abangle/8gpi.abangle
sabdab_dataset/8gpi/annotation/8gpi_A_VH.ann
sabdab_dataset/8gpi/annotation/8gpi_C_VL.ann
sabdab_dataset/8gpi/imgt/8gpi_A_H.ann
sabdab_dataset/8gpi/imgt/8gpi_C_L.ann
sabdab_dataset/8gpi/sequence/8gpi_raw.pdb
sabdab_dataset/8gpi/sequence/8gpi_A_VH.fa
sabdab_dataset/8gpi/sequence/8gpi_C_VL.fa
sabdab_dataset/8gpi/structure/8gpi.pdb
sabdab_dataset/8gpi/structure/chothia/8gpi.pdb
false
false
train
8gpi
D
E
0
X | R
protein | protein
NA | NA
x18 ufo gp41 | x18 ufo gp41
VIRAL PROTEIN
01/08/09
HIV-1 Env X18 UFO in complex with 8ANC195 Fab
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1 | human immunodeficiency virus 1
Niu, J., Xu, Y.W., Yang, B.
3.0
ELECTRON MICROSCOPY
null
null
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gpi/abangle/8gpi.abangle
sabdab_dataset/8gpi/annotation/8gpi_D_VH.ann
sabdab_dataset/8gpi/annotation/8gpi_E_VL.ann
sabdab_dataset/8gpi/imgt/8gpi_D_H.ann
sabdab_dataset/8gpi/imgt/8gpi_E_L.ann
sabdab_dataset/8gpi/sequence/8gpi_raw.pdb
sabdab_dataset/8gpi/sequence/8gpi_D_VH.fa
sabdab_dataset/8gpi/sequence/8gpi_E_VL.fa
sabdab_dataset/8gpi/structure/8gpi.pdb
sabdab_dataset/8gpi/structure/chothia/8gpi.pdb
false
false
train
8gpi
H
L
0
Y | S
protein | protein
NA | NA
x18 ufo gp41 | x18 ufo gp41
VIRAL PROTEIN
01/08/09
HIV-1 Env X18 UFO in complex with 8ANC195 Fab
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1 | human immunodeficiency virus 1
Niu, J., Xu, Y.W., Yang, B.
3.0
ELECTRON MICROSCOPY
null
null
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gpi/abangle/8gpi.abangle
sabdab_dataset/8gpi/annotation/8gpi_H_VH.ann
sabdab_dataset/8gpi/annotation/8gpi_L_VL.ann
sabdab_dataset/8gpi/imgt/8gpi_H_H.ann
sabdab_dataset/8gpi/imgt/8gpi_L_L.ann
sabdab_dataset/8gpi/sequence/8gpi_raw.pdb
sabdab_dataset/8gpi/sequence/8gpi_H_VH.fa
sabdab_dataset/8gpi/sequence/8gpi_L_VL.fa
sabdab_dataset/8gpi/structure/8gpi.pdb
sabdab_dataset/8gpi/structure/chothia/8gpi.pdb
false
false
test
8gpj
A
C
0
Z | W
protein | protein
NA | NA
x16 ufo gp41 | x16 ufo gp41
VIRAL PROTEIN
08/09/23
HIV-1 Env X16 UFO in complex with 8ANC195 Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Niu, J., Xu, Y.W., Yang, B.
3.5
ELECTRON MICROSCOPY
null
null
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gpj/abangle/8gpj.abangle
sabdab_dataset/8gpj/annotation/8gpj_A_VH.ann
sabdab_dataset/8gpj/annotation/8gpj_C_VL.ann
sabdab_dataset/8gpj/imgt/8gpj_A_H.ann
sabdab_dataset/8gpj/imgt/8gpj_C_L.ann
sabdab_dataset/8gpj/sequence/8gpj_raw.pdb
sabdab_dataset/8gpj/sequence/8gpj_A_VH.fa
sabdab_dataset/8gpj/sequence/8gpj_C_VL.fa
sabdab_dataset/8gpj/structure/8gpj.pdb
sabdab_dataset/8gpj/structure/chothia/8gpj.pdb
false
false
test
8gpj
D
E
0
X | V
protein | protein
NA | NA
x16 ufo gp41 | x16 ufo gp41
VIRAL PROTEIN
08/09/23
HIV-1 Env X16 UFO in complex with 8ANC195 Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Niu, J., Xu, Y.W., Yang, B.
3.5
ELECTRON MICROSCOPY
null
null
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gpj/abangle/8gpj.abangle
sabdab_dataset/8gpj/annotation/8gpj_D_VH.ann
sabdab_dataset/8gpj/annotation/8gpj_E_VL.ann
sabdab_dataset/8gpj/imgt/8gpj_D_H.ann
sabdab_dataset/8gpj/imgt/8gpj_E_L.ann
sabdab_dataset/8gpj/sequence/8gpj_raw.pdb
sabdab_dataset/8gpj/sequence/8gpj_D_VH.fa
sabdab_dataset/8gpj/sequence/8gpj_E_VL.fa
sabdab_dataset/8gpj/structure/8gpj.pdb
sabdab_dataset/8gpj/structure/chothia/8gpj.pdb
false
false
train
8gpj
H
L
0
Y | U
protein | protein
NA | NA
x16 ufo gp41 | x16 ufo gp41
VIRAL PROTEIN
08/09/23
HIV-1 Env X16 UFO in complex with 8ANC195 Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Niu, J., Xu, Y.W., Yang, B.
3.5
ELECTRON MICROSCOPY
null
null
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gpj/abangle/8gpj.abangle
sabdab_dataset/8gpj/annotation/8gpj_H_VH.ann
sabdab_dataset/8gpj/annotation/8gpj_L_VL.ann
sabdab_dataset/8gpj/imgt/8gpj_H_H.ann
sabdab_dataset/8gpj/imgt/8gpj_L_L.ann
sabdab_dataset/8gpj/sequence/8gpj_raw.pdb
sabdab_dataset/8gpj/sequence/8gpj_H_VH.fa
sabdab_dataset/8gpj/sequence/8gpj_L_VL.fa
sabdab_dataset/8gpj/structure/8gpj.pdb
sabdab_dataset/8gpj/structure/chothia/8gpj.pdb
false
false
train
8gpk
A
B
0
null
null
null
null
IMMUNE SYSTEM
01/08/09
Crystal structure of human anti-HIV-1 broadly neutralizing antibody F6 Fab
Homo sapiens
homo sapiens
homo sapiens
null
Niu, J., Yang, B.
3.34
X-RAY DIFFRACTION
0.281
0.242
false
true
IGHV4
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/8gpk/abangle/8gpk.abangle
sabdab_dataset/8gpk/annotation/8gpk_A_VH.ann
sabdab_dataset/8gpk/annotation/8gpk_B_VL.ann
sabdab_dataset/8gpk/imgt/8gpk_A_H.ann
sabdab_dataset/8gpk/imgt/8gpk_B_L.ann
sabdab_dataset/8gpk/sequence/8gpk_raw.pdb
sabdab_dataset/8gpk/sequence/8gpk_A_VH.fa
sabdab_dataset/8gpk/sequence/8gpk_B_VL.fa
sabdab_dataset/8gpk/structure/8gpk.pdb
sabdab_dataset/8gpk/structure/chothia/8gpk.pdb
true
false
validation
8gpk
C
D
0
null
null
null
null
IMMUNE SYSTEM
01/08/09
Crystal structure of human anti-HIV-1 broadly neutralizing antibody F6 Fab
Homo sapiens
homo sapiens
homo sapiens
null
Niu, J., Yang, B.
3.34
X-RAY DIFFRACTION
0.281
0.242
false
true
IGHV4
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/8gpk/abangle/8gpk.abangle
sabdab_dataset/8gpk/annotation/8gpk_C_VH.ann
sabdab_dataset/8gpk/annotation/8gpk_D_VL.ann
sabdab_dataset/8gpk/imgt/8gpk_C_H.ann
sabdab_dataset/8gpk/imgt/8gpk_D_L.ann
sabdab_dataset/8gpk/sequence/8gpk_raw.pdb
sabdab_dataset/8gpk/sequence/8gpk_C_VH.fa
sabdab_dataset/8gpk/sequence/8gpk_D_VL.fa
sabdab_dataset/8gpk/structure/8gpk.pdb
sabdab_dataset/8gpk/structure/chothia/8gpk.pdb
true
false
train
8gpt
D
E
0
A
protein
null
envelope protein
ANTIVIRAL PROTEIN
11/02/22
YFV_E_YD6scFv_postfusion
Homo sapiens; Yellow fever virus
homo sapiens
homo sapiens
yellow fever virus
Li, Y., Wu, L., Qi, J., Yan, J., Gao, G.F.
3.07
X-RAY DIFFRACTION
0.247
0.211
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gpt/abangle/8gpt.abangle
sabdab_dataset/8gpt/annotation/8gpt_D_VH.ann
sabdab_dataset/8gpt/annotation/8gpt_E_VL.ann
sabdab_dataset/8gpt/imgt/8gpt_D_H.ann
sabdab_dataset/8gpt/imgt/8gpt_E_L.ann
sabdab_dataset/8gpt/sequence/8gpt_raw.pdb
sabdab_dataset/8gpt/sequence/8gpt_D_VH.fa
sabdab_dataset/8gpt/sequence/8gpt_E_VL.fa
sabdab_dataset/8gpt/structure/8gpt.pdb
sabdab_dataset/8gpt/structure/chothia/8gpt.pdb
false
false
validation
8gpt
F
G
0
B
protein
null
envelope protein
ANTIVIRAL PROTEIN
11/02/22
YFV_E_YD6scFv_postfusion
Homo sapiens; Yellow fever virus
homo sapiens
homo sapiens
yellow fever virus
Li, Y., Wu, L., Qi, J., Yan, J., Gao, G.F.
3.07
X-RAY DIFFRACTION
0.247
0.211
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gpt/abangle/8gpt.abangle
sabdab_dataset/8gpt/annotation/8gpt_F_VH.ann
sabdab_dataset/8gpt/annotation/8gpt_G_VL.ann
sabdab_dataset/8gpt/imgt/8gpt_F_H.ann
sabdab_dataset/8gpt/imgt/8gpt_G_L.ann
sabdab_dataset/8gpt/sequence/8gpt_raw.pdb
sabdab_dataset/8gpt/sequence/8gpt_F_VH.fa
sabdab_dataset/8gpt/sequence/8gpt_G_VL.fa
sabdab_dataset/8gpt/structure/8gpt.pdb
sabdab_dataset/8gpt/structure/chothia/8gpt.pdb
false
false
train
8gpt
H
I
0
C
protein
null
envelope protein
ANTIVIRAL PROTEIN
11/02/22
YFV_E_YD6scFv_postfusion
Homo sapiens; Yellow fever virus
homo sapiens
homo sapiens
yellow fever virus
Li, Y., Wu, L., Qi, J., Yan, J., Gao, G.F.
3.07
X-RAY DIFFRACTION
0.247
0.211
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gpt/abangle/8gpt.abangle
sabdab_dataset/8gpt/annotation/8gpt_H_VH.ann
sabdab_dataset/8gpt/annotation/8gpt_I_VL.ann
sabdab_dataset/8gpt/imgt/8gpt_H_H.ann
sabdab_dataset/8gpt/imgt/8gpt_I_L.ann
sabdab_dataset/8gpt/sequence/8gpt_raw.pdb
sabdab_dataset/8gpt/sequence/8gpt_H_VH.fa
sabdab_dataset/8gpt/sequence/8gpt_I_VL.fa
sabdab_dataset/8gpt/structure/8gpt.pdb
sabdab_dataset/8gpt/structure/chothia/8gpt.pdb
false
false
train
8gpu
C
D
0
B
protein
null
envelope protein
ANTIVIRAL PROTEIN
01/08/09
YFV_E_YD6Fab_prefusion
Homo sapiens; Yellow fever virus
homo sapiens
homo sapiens
yellow fever virus
Li, Y., Wu, L., Qi, J., Yan, J., Gao, G.F.
2.79
X-RAY DIFFRACTION
0.279
0.244
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gpu/abangle/8gpu.abangle
sabdab_dataset/8gpu/annotation/8gpu_C_VH.ann
sabdab_dataset/8gpu/annotation/8gpu_D_VL.ann
sabdab_dataset/8gpu/imgt/8gpu_C_H.ann
sabdab_dataset/8gpu/imgt/8gpu_D_L.ann
sabdab_dataset/8gpu/sequence/8gpu_raw.pdb
sabdab_dataset/8gpu/sequence/8gpu_C_VH.fa
sabdab_dataset/8gpu/sequence/8gpu_D_VL.fa
sabdab_dataset/8gpu/structure/8gpu.pdb
sabdab_dataset/8gpu/structure/chothia/8gpu.pdb
true
false
train
8gpu
F
G
0
E
protein
null
envelope protein
ANTIVIRAL PROTEIN
01/08/09
YFV_E_YD6Fab_prefusion
Homo sapiens; Yellow fever virus
homo sapiens
homo sapiens
yellow fever virus
Li, Y., Wu, L., Qi, J., Yan, J., Gao, G.F.
2.79
X-RAY DIFFRACTION
0.279
0.244
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gpu/abangle/8gpu.abangle
sabdab_dataset/8gpu/annotation/8gpu_F_VH.ann
sabdab_dataset/8gpu/annotation/8gpu_G_VL.ann
sabdab_dataset/8gpu/imgt/8gpu_F_H.ann
sabdab_dataset/8gpu/imgt/8gpu_G_L.ann
sabdab_dataset/8gpu/sequence/8gpu_raw.pdb
sabdab_dataset/8gpu/sequence/8gpu_F_VH.fa
sabdab_dataset/8gpu/sequence/8gpu_G_VL.fa
sabdab_dataset/8gpu/structure/8gpu.pdb
sabdab_dataset/8gpu/structure/chothia/8gpu.pdb
true
false
train
8gpu
H
L
0
A
protein
null
envelope protein
ANTIVIRAL PROTEIN
01/08/09
YFV_E_YD6Fab_prefusion
Homo sapiens; Yellow fever virus
homo sapiens
homo sapiens
yellow fever virus
Li, Y., Wu, L., Qi, J., Yan, J., Gao, G.F.
2.79
X-RAY DIFFRACTION
0.279
0.244
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gpu/abangle/8gpu.abangle
sabdab_dataset/8gpu/annotation/8gpu_H_VH.ann
sabdab_dataset/8gpu/annotation/8gpu_L_VL.ann
sabdab_dataset/8gpu/imgt/8gpu_H_H.ann
sabdab_dataset/8gpu/imgt/8gpu_L_L.ann
sabdab_dataset/8gpu/sequence/8gpu_raw.pdb
sabdab_dataset/8gpu/sequence/8gpu_H_VH.fa
sabdab_dataset/8gpu/sequence/8gpu_L_VL.fa
sabdab_dataset/8gpu/structure/8gpu.pdb
sabdab_dataset/8gpu/structure/chothia/8gpu.pdb
true
false
test
8gpu
J
K
0
I
protein
null
envelope protein
ANTIVIRAL PROTEIN
01/08/09
YFV_E_YD6Fab_prefusion
Homo sapiens; Yellow fever virus
homo sapiens
homo sapiens
yellow fever virus
Li, Y., Wu, L., Qi, J., Yan, J., Gao, G.F.
2.79
X-RAY DIFFRACTION
0.279
0.244
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gpu/abangle/8gpu.abangle
sabdab_dataset/8gpu/annotation/8gpu_J_VH.ann
sabdab_dataset/8gpu/annotation/8gpu_K_VL.ann
sabdab_dataset/8gpu/imgt/8gpu_J_H.ann
sabdab_dataset/8gpu/imgt/8gpu_K_L.ann
sabdab_dataset/8gpu/sequence/8gpu_raw.pdb
sabdab_dataset/8gpu/sequence/8gpu_J_VH.fa
sabdab_dataset/8gpu/sequence/8gpu_K_VL.fa
sabdab_dataset/8gpu/structure/8gpu.pdb
sabdab_dataset/8gpu/structure/chothia/8gpu.pdb
true
false
test
8gpu
N
O
0
M
protein
null
envelope protein
ANTIVIRAL PROTEIN
01/08/09
YFV_E_YD6Fab_prefusion
Homo sapiens; Yellow fever virus
homo sapiens
homo sapiens
yellow fever virus
Li, Y., Wu, L., Qi, J., Yan, J., Gao, G.F.
2.79
X-RAY DIFFRACTION
0.279
0.244
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gpu/abangle/8gpu.abangle
sabdab_dataset/8gpu/annotation/8gpu_N_VH.ann
sabdab_dataset/8gpu/annotation/8gpu_O_VL.ann
sabdab_dataset/8gpu/imgt/8gpu_N_H.ann
sabdab_dataset/8gpu/imgt/8gpu_O_L.ann
sabdab_dataset/8gpu/sequence/8gpu_raw.pdb
sabdab_dataset/8gpu/sequence/8gpu_N_VH.fa
sabdab_dataset/8gpu/sequence/8gpu_O_VL.fa
sabdab_dataset/8gpu/structure/8gpu.pdb
sabdab_dataset/8gpu/structure/chothia/8gpu.pdb
true
false
train
8gpu
Q
R
0
P
protein
null
envelope protein
ANTIVIRAL PROTEIN
01/08/09
YFV_E_YD6Fab_prefusion
Homo sapiens; Yellow fever virus
homo sapiens
homo sapiens
yellow fever virus
Li, Y., Wu, L., Qi, J., Yan, J., Gao, G.F.
2.79
X-RAY DIFFRACTION
0.279
0.244
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gpu/abangle/8gpu.abangle
sabdab_dataset/8gpu/annotation/8gpu_Q_VH.ann
sabdab_dataset/8gpu/annotation/8gpu_R_VL.ann
sabdab_dataset/8gpu/imgt/8gpu_Q_H.ann
sabdab_dataset/8gpu/imgt/8gpu_R_L.ann
sabdab_dataset/8gpu/sequence/8gpu_raw.pdb
sabdab_dataset/8gpu/sequence/8gpu_Q_VH.fa
sabdab_dataset/8gpu/sequence/8gpu_R_VL.fa
sabdab_dataset/8gpu/structure/8gpu.pdb
sabdab_dataset/8gpu/structure/chothia/8gpu.pdb
true
false
train
8gpx
H
L
0
E
protein
null
envelope protein
ANTIVIRAL PROTEIN
11/02/22
YFV_E_YD73Fab_postfusion
Homo sapiens; Yellow fever virus
homo sapiens
homo sapiens
yellow fever virus
Li, Y., Wu, L., Chai, Y., Qi, J., Yan, J., Gao, G.F.
3.8
X-RAY DIFFRACTION
0.306
0.261
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8gpx/abangle/8gpx.abangle
sabdab_dataset/8gpx/annotation/8gpx_H_VH.ann
sabdab_dataset/8gpx/annotation/8gpx_L_VL.ann
sabdab_dataset/8gpx/imgt/8gpx_H_H.ann
sabdab_dataset/8gpx/imgt/8gpx_L_L.ann
sabdab_dataset/8gpx/sequence/8gpx_raw.pdb
sabdab_dataset/8gpx/sequence/8gpx_H_VH.fa
sabdab_dataset/8gpx/sequence/8gpx_L_VL.fa
sabdab_dataset/8gpx/structure/8gpx.pdb
sabdab_dataset/8gpx/structure/chothia/8gpx.pdb
true
false
train
8gpy
C
D
0
B
protein
null
spike protein s1
VIRAL PROTEIN
06/28/23
Crystal structure of Omicron BA.4/5 RBD in complex with a neutralizing antibody scFv
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Gao, Y.X., Song, Z.D., Wang, W.M., Guo, Y.
2.51
X-RAY DIFFRACTION
0.251
0.215
true
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gpy/abangle/8gpy.abangle
sabdab_dataset/8gpy/annotation/8gpy_C_VH.ann
sabdab_dataset/8gpy/annotation/8gpy_D_VL.ann
sabdab_dataset/8gpy/imgt/8gpy_C_H.ann
sabdab_dataset/8gpy/imgt/8gpy_D_L.ann
sabdab_dataset/8gpy/sequence/8gpy_raw.pdb
sabdab_dataset/8gpy/sequence/8gpy_C_VH.fa
sabdab_dataset/8gpy/sequence/8gpy_D_VL.fa
sabdab_dataset/8gpy/structure/8gpy.pdb
sabdab_dataset/8gpy/structure/chothia/8gpy.pdb
true
true
train
8gpy
E
F
0
A
protein
null
spike protein s1
VIRAL PROTEIN
06/28/23
Crystal structure of Omicron BA.4/5 RBD in complex with a neutralizing antibody scFv
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Gao, Y.X., Song, Z.D., Wang, W.M., Guo, Y.
2.51
X-RAY DIFFRACTION
0.251
0.215
true
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/8gpy/abangle/8gpy.abangle
sabdab_dataset/8gpy/annotation/8gpy_E_VH.ann
sabdab_dataset/8gpy/annotation/8gpy_F_VL.ann
sabdab_dataset/8gpy/imgt/8gpy_E_H.ann
sabdab_dataset/8gpy/imgt/8gpy_F_L.ann
sabdab_dataset/8gpy/sequence/8gpy_raw.pdb
sabdab_dataset/8gpy/sequence/8gpy_E_VH.fa
sabdab_dataset/8gpy/sequence/8gpy_F_VL.fa
sabdab_dataset/8gpy/structure/8gpy.pdb
sabdab_dataset/8gpy/structure/chothia/8gpy.pdb
true
false
test
8gq1
H
L
0
C
protein
null
lysozyme c
IMMUNE SYSTEM
08/30/23
HyHEL10 Fab complexed with hen egg lysozyme carrying arginine cluster in framework region of light chain.
Gallus gallus; Mus musculus
mus musculus
mus musculus
gallus gallus
Matsuura, H., Hirata, K., Sakai, N., Nakakido, M., Tsumoto, K.
3.13
X-RAY DIFFRACTION
0.267
0.23
false
true
IGHV3
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/8gq1/abangle/8gq1.abangle
sabdab_dataset/8gq1/annotation/8gq1_H_VH.ann
sabdab_dataset/8gq1/annotation/8gq1_L_VL.ann
sabdab_dataset/8gq1/imgt/8gq1_H_H.ann
sabdab_dataset/8gq1/imgt/8gq1_L_L.ann
sabdab_dataset/8gq1/sequence/8gq1_raw.pdb
sabdab_dataset/8gq1/sequence/8gq1_H_VH.fa
sabdab_dataset/8gq1/sequence/8gq1_L_VL.fa
sabdab_dataset/8gq1/structure/8gq1.pdb
sabdab_dataset/8gq1/structure/chothia/8gq1.pdb
true
false
train
8gq5
a
null
0
A
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_a_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_a_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_a_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
train
8gq5
b
null
0
B
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_b_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_b_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_b_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
validation
8gq5
c
null
0
C
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_c_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_c_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_c_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
train
8gq5
d
null
0
D
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_d_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_d_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_d_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
train
8gq5
e
null
0
E
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_e_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_e_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_e_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
train
8gq5
f
null
0
F
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_f_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_f_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_f_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
test
8gq5
g
null
0
G
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_g_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_g_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_g_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
train
8gq5
h
null
0
H
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_h_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_h_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_h_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
train
8gq5
i
null
0
I
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_i_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_i_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_i_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
train
8gq5
j
null
0
J
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_j_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_j_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_j_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
train
8gq5
k
null
0
K
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_k_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_k_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_k_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
validation
8gq5
l
null
0
L
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_l_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_l_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_l_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
train
8gq5
m
null
0
M
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_m_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_m_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_m_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
train
8gq5
n
null
0
N
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_n_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_n_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_n_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
train
8gq5
o
null
0
O
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_o_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_o_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_o_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
test
8gq5
p
null
0
P
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/8gq5/annotation/8gq5_p_VH.ann
null
sabdab_dataset/8gq5/imgt/8gq5_p_H.ann
null
sabdab_dataset/8gq5/sequence/8gq5_raw.pdb
sabdab_dataset/8gq5/sequence/8gq5_p_VH.fa
null
sabdab_dataset/8gq5/structure/8gq5.pdb
sabdab_dataset/8gq5/structure/chothia/8gq5.pdb
false
false
test
8grr
H
L
0
2
protein
null
a/wh/cha/09 vp2
VIRUS
10/11/23
Complex of FMDV A/WH/CHA/09 and bovine neutralizing scFv antibody W125
Bos taurus; Foot-and-mouth disease virus A
bos taurus
bos taurus
foot-and-mouth disease virus a
He, Y., Kun, L.
3.72
ELECTRON MICROSCOPY
null
null
true
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/8grr/abangle/8grr.abangle
sabdab_dataset/8grr/annotation/8grr_H_VH.ann
sabdab_dataset/8grr/annotation/8grr_L_VL.ann
sabdab_dataset/8grr/imgt/8grr_H_H.ann
sabdab_dataset/8grr/imgt/8grr_L_L.ann
sabdab_dataset/8grr/sequence/8grr_raw.pdb
sabdab_dataset/8grr/sequence/8grr_H_VH.fa
sabdab_dataset/8grr/sequence/8grr_L_VL.fa
sabdab_dataset/8grr/structure/8grr.pdb
sabdab_dataset/8grr/structure/chothia/8grr.pdb
false
false
validation
8gs9
H
K
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
05/03/23
SARS-CoV-2 BA.2 spike RBD in complex bound with VacBB-551
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, C.C., Ju, B., Shen, S.L., Zhang, Z.
2.66
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gs9/abangle/8gs9.abangle
sabdab_dataset/8gs9/annotation/8gs9_H_VH.ann
sabdab_dataset/8gs9/annotation/8gs9_K_VL.ann
sabdab_dataset/8gs9/imgt/8gs9_H_H.ann
sabdab_dataset/8gs9/imgt/8gs9_K_L.ann
sabdab_dataset/8gs9/sequence/8gs9_raw.pdb
sabdab_dataset/8gs9/sequence/8gs9_H_VH.fa
sabdab_dataset/8gs9/sequence/8gs9_K_VL.fa
sabdab_dataset/8gs9/structure/8gs9.pdb
sabdab_dataset/8gs9/structure/chothia/8gs9.pdb
false
false
train
8gsb
H
K
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
09/06/23
SARS-COV-2 BA.1 Spike incomplex with VacBB-665
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, C.C., Ju, B., Shen, S.L., Zhang, Z.
3.99
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8gsb/abangle/8gsb.abangle
sabdab_dataset/8gsb/annotation/8gsb_H_VH.ann
sabdab_dataset/8gsb/annotation/8gsb_K_VL.ann
sabdab_dataset/8gsb/imgt/8gsb_H_H.ann
sabdab_dataset/8gsb/imgt/8gsb_K_L.ann
sabdab_dataset/8gsb/sequence/8gsb_raw.pdb
sabdab_dataset/8gsb/sequence/8gsb_H_VH.fa
sabdab_dataset/8gsb/sequence/8gsb_K_VL.fa
sabdab_dataset/8gsb/structure/8gsb.pdb
sabdab_dataset/8gsb/structure/chothia/8gsb.pdb
false
false
train
8gsc
H
L
0
1 | 3
protein | protein
NA | NA
vp1 | vp3
VIRUS/IMMUNE SYSTEM
12/14/22
Echovirus3 A-particle in complex with 6D10 Fab
Echovirus E3; Mus musculus
mus musculus
mus musculus
echovirus e3 | echovirus e3
Wang, X., Fu, W.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/8gsc/abangle/8gsc.abangle
sabdab_dataset/8gsc/annotation/8gsc_H_VH.ann
sabdab_dataset/8gsc/annotation/8gsc_L_VL.ann
sabdab_dataset/8gsc/imgt/8gsc_H_H.ann
sabdab_dataset/8gsc/imgt/8gsc_L_L.ann
sabdab_dataset/8gsc/sequence/8gsc_raw.pdb
sabdab_dataset/8gsc/sequence/8gsc_H_VH.fa
sabdab_dataset/8gsc/sequence/8gsc_L_VL.fa
sabdab_dataset/8gsc/structure/8gsc.pdb
sabdab_dataset/8gsc/structure/chothia/8gsc.pdb
false
false
train
8gsd
H
L
0
1 | 3
protein | protein
NA | NA
genome polyprotein (fragment) | genome polyprotein
VIRUS/IMMUNE SYSTEM
12/14/22
Echovirus3 full particle in complex with 6D10 Fab
Echovirus E3; Mus musculus
mus musculus
mus musculus
echovirus e3 | echovirus e3
Wang, X., Fu, W.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/8gsd/abangle/8gsd.abangle
sabdab_dataset/8gsd/annotation/8gsd_H_VH.ann
sabdab_dataset/8gsd/annotation/8gsd_L_VL.ann
sabdab_dataset/8gsd/imgt/8gsd_H_H.ann
sabdab_dataset/8gsd/imgt/8gsd_L_L.ann
sabdab_dataset/8gsd/sequence/8gsd_raw.pdb
sabdab_dataset/8gsd/sequence/8gsd_H_VH.fa
sabdab_dataset/8gsd/sequence/8gsd_L_VL.fa
sabdab_dataset/8gsd/structure/8gsd.pdb
sabdab_dataset/8gsd/structure/chothia/8gsd.pdb
false
false
train
8gse
H
L
0
1 | 3
protein | protein
NA | NA
vp1 | vp3
VIRAL PROTEIN/IMMUNE SYSTEM
12/14/22
Echovirus3 capsid protein in complex with 6D10 Fab (upright)
Echovirus E3; Mus musculus
mus musculus
mus musculus
echovirus e3 | echovirus e3
Wang, X., Fu, W.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/8gse/abangle/8gse.abangle
sabdab_dataset/8gse/annotation/8gse_H_VH.ann
sabdab_dataset/8gse/annotation/8gse_L_VL.ann
sabdab_dataset/8gse/imgt/8gse_H_H.ann
sabdab_dataset/8gse/imgt/8gse_L_L.ann
sabdab_dataset/8gse/sequence/8gse_raw.pdb
sabdab_dataset/8gse/sequence/8gse_H_VH.fa
sabdab_dataset/8gse/sequence/8gse_L_VL.fa
sabdab_dataset/8gse/structure/8gse.pdb
sabdab_dataset/8gse/structure/chothia/8gse.pdb
false
false
train
8gsf
E
F
0
1 | 3
protein | protein
NA | NA
vp1 | vp3
VIRUS/IMMUNE SYSTEM
12/14/22
Echovirus3 empty particle in complex with 6D10 Fab (sideling)
Echovirus E3; Mus musculus
mus musculus
mus musculus
echovirus e3 | echovirus e3
Wang, X., Fu, W.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/8gsf/abangle/8gsf.abangle
sabdab_dataset/8gsf/annotation/8gsf_E_VH.ann
sabdab_dataset/8gsf/annotation/8gsf_F_VL.ann
sabdab_dataset/8gsf/imgt/8gsf_E_H.ann
sabdab_dataset/8gsf/imgt/8gsf_F_L.ann
sabdab_dataset/8gsf/sequence/8gsf_raw.pdb
sabdab_dataset/8gsf/sequence/8gsf_E_VH.fa
sabdab_dataset/8gsf/sequence/8gsf_F_VL.fa
sabdab_dataset/8gsf/structure/8gsf.pdb
sabdab_dataset/8gsf/structure/chothia/8gsf.pdb
false
false
train
8gsf
H
L
0
A | C
protein | protein
NA | NA
vp1 | vp3
VIRUS/IMMUNE SYSTEM
12/14/22
Echovirus3 empty particle in complex with 6D10 Fab (sideling)
Echovirus E3; Mus musculus
mus musculus
mus musculus
echovirus e3 | echovirus e3
Wang, X., Fu, W.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/8gsf/abangle/8gsf.abangle
sabdab_dataset/8gsf/annotation/8gsf_H_VH.ann
sabdab_dataset/8gsf/annotation/8gsf_L_VL.ann
sabdab_dataset/8gsf/imgt/8gsf_H_H.ann
sabdab_dataset/8gsf/imgt/8gsf_L_L.ann
sabdab_dataset/8gsf/sequence/8gsf_raw.pdb
sabdab_dataset/8gsf/sequence/8gsf_H_VH.fa
sabdab_dataset/8gsf/sequence/8gsf_L_VL.fa
sabdab_dataset/8gsf/structure/8gsf.pdb
sabdab_dataset/8gsf/structure/chothia/8gsf.pdb
false
false
train
8gsi
B
A
0
null
null
null
null
IMMUNE SYSTEM
09/06/23
Structure of the cobolimab Fab
Camelus bactrianus; Homo sapiens
homo sapiens
homo sapiens
null
Heo, Y.S., Choi, S.B.
2.02
X-RAY DIFFRACTION
0.233
0.197
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gsi/abangle/8gsi.abangle
sabdab_dataset/8gsi/annotation/8gsi_B_VH.ann
sabdab_dataset/8gsi/annotation/8gsi_A_VL.ann
sabdab_dataset/8gsi/imgt/8gsi_B_H.ann
sabdab_dataset/8gsi/imgt/8gsi_A_L.ann
sabdab_dataset/8gsi/sequence/8gsi_raw.pdb
sabdab_dataset/8gsi/sequence/8gsi_B_VH.fa
sabdab_dataset/8gsi/sequence/8gsi_A_VL.fa
sabdab_dataset/8gsi/structure/8gsi.pdb
sabdab_dataset/8gsi/structure/chothia/8gsi.pdb
true
false
test
8gsi
F
null
0
null
null
null
null
IMMUNE SYSTEM
09/06/23
Structure of the cobolimab Fab
Camelus bactrianus; Homo sapiens
camelus bactrianus
null
null
Heo, Y.S., Choi, S.B.
2.02
X-RAY DIFFRACTION
0.233
0.197
false
true
IGHV1
null
null
null
null
null
null
null
sabdab_dataset/8gsi/abangle/8gsi.abangle
sabdab_dataset/8gsi/annotation/8gsi_F_VH.ann
null
sabdab_dataset/8gsi/imgt/8gsi_F_H.ann
null
sabdab_dataset/8gsi/sequence/8gsi_raw.pdb
sabdab_dataset/8gsi/sequence/8gsi_F_VH.fa
null
sabdab_dataset/8gsi/structure/8gsi.pdb
sabdab_dataset/8gsi/structure/chothia/8gsi.pdb
true
false
validation
8gsp
H
L
0
3 | 2
protein | protein
NA | NA
a/wh/cha/09 vp3 | a/wh/cha/09 vp2
VIRUS
10/11/23
Complex of FMDV A/WH/CHA/09 and bovine neutralizing scFv antibody W2
Bos taurus; Foot-and-mouth disease virus A
bos taurus
bos taurus
foot-and-mouth disease virus a | foot-and-mouth disease virus a
He, Y., Li, K.
3.75
ELECTRON MICROSCOPY
null
null
true
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/8gsp/abangle/8gsp.abangle
sabdab_dataset/8gsp/annotation/8gsp_H_VH.ann
sabdab_dataset/8gsp/annotation/8gsp_L_VL.ann
sabdab_dataset/8gsp/imgt/8gsp_H_H.ann
sabdab_dataset/8gsp/imgt/8gsp_L_L.ann
sabdab_dataset/8gsp/sequence/8gsp_raw.pdb
sabdab_dataset/8gsp/sequence/8gsp_H_VH.fa
sabdab_dataset/8gsp/sequence/8gsp_L_VL.fa
sabdab_dataset/8gsp/structure/8gsp.pdb
sabdab_dataset/8gsp/structure/chothia/8gsp.pdb
false
false
validation
8gto
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/12/23
cryo-EM structure of Omicron BA.5 S protein in complex with XGv282
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Xia, X.Y., Zhang, Y.Y., Chi, X.M., Huang, B.D., Wu, L.S., Zhou, Q.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/8gto/abangle/8gto.abangle
sabdab_dataset/8gto/annotation/8gto_H_VH.ann
sabdab_dataset/8gto/annotation/8gto_L_VL.ann
sabdab_dataset/8gto/imgt/8gto_H_H.ann
sabdab_dataset/8gto/imgt/8gto_L_L.ann
sabdab_dataset/8gto/sequence/8gto_raw.pdb
sabdab_dataset/8gto/sequence/8gto_H_VH.fa
sabdab_dataset/8gto/sequence/8gto_L_VL.fa
sabdab_dataset/8gto/structure/8gto.pdb
sabdab_dataset/8gto/structure/chothia/8gto.pdb
false
false
train
8gto
I
M
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/12/23
cryo-EM structure of Omicron BA.5 S protein in complex with XGv282
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Xia, X.Y., Zhang, Y.Y., Chi, X.M., Huang, B.D., Wu, L.S., Zhou, Q.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/8gto/abangle/8gto.abangle
sabdab_dataset/8gto/annotation/8gto_I_VH.ann
sabdab_dataset/8gto/annotation/8gto_M_VL.ann
sabdab_dataset/8gto/imgt/8gto_I_H.ann
sabdab_dataset/8gto/imgt/8gto_M_L.ann
sabdab_dataset/8gto/sequence/8gto_raw.pdb
sabdab_dataset/8gto/sequence/8gto_I_VH.fa
sabdab_dataset/8gto/sequence/8gto_M_VL.fa
sabdab_dataset/8gto/structure/8gto.pdb
sabdab_dataset/8gto/structure/chothia/8gto.pdb
false
false
train
8gto
J
N
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/12/23
cryo-EM structure of Omicron BA.5 S protein in complex with XGv282
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Xia, X.Y., Zhang, Y.Y., Chi, X.M., Huang, B.D., Wu, L.S., Zhou, Q.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/8gto/abangle/8gto.abangle
sabdab_dataset/8gto/annotation/8gto_J_VH.ann
sabdab_dataset/8gto/annotation/8gto_N_VL.ann
sabdab_dataset/8gto/imgt/8gto_J_H.ann
sabdab_dataset/8gto/imgt/8gto_N_L.ann
sabdab_dataset/8gto/sequence/8gto_raw.pdb
sabdab_dataset/8gto/sequence/8gto_J_VH.fa
sabdab_dataset/8gto/sequence/8gto_N_VL.fa
sabdab_dataset/8gto/structure/8gto.pdb
sabdab_dataset/8gto/structure/chothia/8gto.pdb
false
false
train
8gtp
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/12/23
cryo-EM structure of Omicron BA.5 S protein in complex with XGv289
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Xia, X.Y., Zhang, Y.Y., Chi, X.M., Huang, B.D., Wu, L.S., Zhou, Q.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/8gtp/abangle/8gtp.abangle
sabdab_dataset/8gtp/annotation/8gtp_H_VH.ann
sabdab_dataset/8gtp/annotation/8gtp_L_VL.ann
sabdab_dataset/8gtp/imgt/8gtp_H_H.ann
sabdab_dataset/8gtp/imgt/8gtp_L_L.ann
sabdab_dataset/8gtp/sequence/8gtp_raw.pdb
sabdab_dataset/8gtp/sequence/8gtp_H_VH.fa
sabdab_dataset/8gtp/sequence/8gtp_L_VL.fa
sabdab_dataset/8gtp/structure/8gtp.pdb
sabdab_dataset/8gtp/structure/chothia/8gtp.pdb
false
false
test
8gtp
I
M
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/12/23
cryo-EM structure of Omicron BA.5 S protein in complex with XGv289
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Xia, X.Y., Zhang, Y.Y., Chi, X.M., Huang, B.D., Wu, L.S., Zhou, Q.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/8gtp/abangle/8gtp.abangle
sabdab_dataset/8gtp/annotation/8gtp_I_VH.ann
sabdab_dataset/8gtp/annotation/8gtp_M_VL.ann
sabdab_dataset/8gtp/imgt/8gtp_I_H.ann
sabdab_dataset/8gtp/imgt/8gtp_M_L.ann
sabdab_dataset/8gtp/sequence/8gtp_raw.pdb
sabdab_dataset/8gtp/sequence/8gtp_I_VH.fa
sabdab_dataset/8gtp/sequence/8gtp_M_VL.fa
sabdab_dataset/8gtp/structure/8gtp.pdb
sabdab_dataset/8gtp/structure/chothia/8gtp.pdb
false
false
train
8gtp
J
N
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/12/23
cryo-EM structure of Omicron BA.5 S protein in complex with XGv289
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Xia, X.Y., Zhang, Y.Y., Chi, X.M., Huang, B.D., Wu, L.S., Zhou, Q.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/8gtp/abangle/8gtp.abangle
sabdab_dataset/8gtp/annotation/8gtp_J_VH.ann
sabdab_dataset/8gtp/annotation/8gtp_N_VL.ann
sabdab_dataset/8gtp/imgt/8gtp_J_H.ann
sabdab_dataset/8gtp/imgt/8gtp_N_L.ann
sabdab_dataset/8gtp/sequence/8gtp_raw.pdb
sabdab_dataset/8gtp/sequence/8gtp_J_VH.fa
sabdab_dataset/8gtp/sequence/8gtp_N_VL.fa
sabdab_dataset/8gtp/structure/8gtp.pdb
sabdab_dataset/8gtp/structure/chothia/8gtp.pdb
false
false
train
8gtq
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/12/23
cryo-EM structure of Omicron BA.5 S protein in complex with S2L20
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Xia, X.Y., Zhang, Y.Y., Chi, X.M., Huang, B.D., Wu, L.S., Zhou, Q.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gtq/abangle/8gtq.abangle
sabdab_dataset/8gtq/annotation/8gtq_H_VH.ann
sabdab_dataset/8gtq/annotation/8gtq_L_VL.ann
sabdab_dataset/8gtq/imgt/8gtq_H_H.ann
sabdab_dataset/8gtq/imgt/8gtq_L_L.ann
sabdab_dataset/8gtq/sequence/8gtq_raw.pdb
sabdab_dataset/8gtq/sequence/8gtq_H_VH.fa
sabdab_dataset/8gtq/sequence/8gtq_L_VL.fa
sabdab_dataset/8gtq/structure/8gtq.pdb
sabdab_dataset/8gtq/structure/chothia/8gtq.pdb
false
false
train
8gtq
I
M
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/12/23
cryo-EM structure of Omicron BA.5 S protein in complex with S2L20
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Xia, X.Y., Zhang, Y.Y., Chi, X.M., Huang, B.D., Wu, L.S., Zhou, Q.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gtq/abangle/8gtq.abangle
sabdab_dataset/8gtq/annotation/8gtq_I_VH.ann
sabdab_dataset/8gtq/annotation/8gtq_M_VL.ann
sabdab_dataset/8gtq/imgt/8gtq_I_H.ann
sabdab_dataset/8gtq/imgt/8gtq_M_L.ann
sabdab_dataset/8gtq/sequence/8gtq_raw.pdb
sabdab_dataset/8gtq/sequence/8gtq_I_VH.fa
sabdab_dataset/8gtq/sequence/8gtq_M_VL.fa
sabdab_dataset/8gtq/structure/8gtq.pdb
sabdab_dataset/8gtq/structure/chothia/8gtq.pdb
false
false
train
8gtq
J
N
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
07/12/23
cryo-EM structure of Omicron BA.5 S protein in complex with S2L20
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Xia, X.Y., Zhang, Y.Y., Chi, X.M., Huang, B.D., Wu, L.S., Zhou, Q.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gtq/abangle/8gtq.abangle
sabdab_dataset/8gtq/annotation/8gtq_J_VH.ann
sabdab_dataset/8gtq/annotation/8gtq_N_VL.ann
sabdab_dataset/8gtq/imgt/8gtq_J_H.ann
sabdab_dataset/8gtq/imgt/8gtq_N_L.ann
sabdab_dataset/8gtq/sequence/8gtq_raw.pdb
sabdab_dataset/8gtq/sequence/8gtq_J_VH.fa
sabdab_dataset/8gtq/sequence/8gtq_N_VL.fa
sabdab_dataset/8gtq/structure/8gtq.pdb
sabdab_dataset/8gtq/structure/chothia/8gtq.pdb
false
false
train
8guq
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
STRUCTURAL PROTEIN
05/10/23
Cryo-EM structure of CB2-G protein complex
Homo sapiens
homo sapiens
null
homo sapiens | homo sapiens
Wu, L.J., Hua, T., Liu, Z.J., Li, X.T., Chang, H.
3.08
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/8guq/abangle/8guq.abangle
sabdab_dataset/8guq/annotation/8guq_S_VH.ann
sabdab_dataset/8guq/annotation/8guq_S_VL.ann
sabdab_dataset/8guq/imgt/8guq_S_H.ann
sabdab_dataset/8guq/imgt/8guq_S_L.ann
sabdab_dataset/8guq/sequence/8guq_raw.pdb
sabdab_dataset/8guq/sequence/8guq_S_VH.fa
sabdab_dataset/8guq/sequence/8guq_S_VL.fa
sabdab_dataset/8guq/structure/8guq.pdb
sabdab_dataset/8guq/structure/chothia/8guq.pdb
false
false
train
8gur
S
s
0
A | C | B
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
STRUCTURAL PROTEIN
05/10/23
Cryo-EM structure of CP-CB2-G protein complex
Homo sapiens
homo sapiens
null
homo sapiens | homo sapiens | homo sapiens
Wu, L.J., Hua, T., Liu, Z.J., Li, X.T., Chang, H.
2.84
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/8gur/abangle/8gur.abangle
sabdab_dataset/8gur/annotation/8gur_S_VH.ann
sabdab_dataset/8gur/annotation/8gur_S_VL.ann
sabdab_dataset/8gur/imgt/8gur_S_H.ann
sabdab_dataset/8gur/imgt/8gur_S_L.ann
sabdab_dataset/8gur/sequence/8gur_raw.pdb
sabdab_dataset/8gur/sequence/8gur_S_VH.fa
sabdab_dataset/8gur/sequence/8gur_S_VL.fa
sabdab_dataset/8gur/structure/8gur.pdb
sabdab_dataset/8gur/structure/chothia/8gur.pdb
false
false
train
8gus
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
STRUCTURAL PROTEIN
05/10/23
Cryo-EM structure of HU-CB2-G protein complex
Homo sapiens
homo sapiens
null
homo sapiens | homo sapiens
Wu, L.J., Hua, T., Liu, Z.J., Li, X.T., Chang, H.
2.97
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/8gus/abangle/8gus.abangle
sabdab_dataset/8gus/annotation/8gus_S_VH.ann
sabdab_dataset/8gus/annotation/8gus_S_VL.ann
sabdab_dataset/8gus/imgt/8gus_S_H.ann
sabdab_dataset/8gus/imgt/8gus_S_L.ann
sabdab_dataset/8gus/sequence/8gus_raw.pdb
sabdab_dataset/8gus/sequence/8gus_S_VH.fa
sabdab_dataset/8gus/sequence/8gus_S_VL.fa
sabdab_dataset/8gus/structure/8gus.pdb
sabdab_dataset/8gus/structure/chothia/8gus.pdb
false
false
train
8gut
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
STRUCTURAL PROTEIN
05/10/23
Cryo-EM structure of LEI-CB2-Gi complex
Homo sapiens; Homo sapiens neanderthalensis
homo sapiens
null
homo sapiens | homo sapiens
Liu, Z.J., Hua, T., Li, X.T., Chang, H., Wu, L.J.
2.98
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/8gut/abangle/8gut.abangle
sabdab_dataset/8gut/annotation/8gut_S_VH.ann
sabdab_dataset/8gut/annotation/8gut_S_VL.ann
sabdab_dataset/8gut/imgt/8gut_S_H.ann
sabdab_dataset/8gut/imgt/8gut_S_L.ann
sabdab_dataset/8gut/sequence/8gut_raw.pdb
sabdab_dataset/8gut/sequence/8gut_S_VH.fa
sabdab_dataset/8gut/sequence/8gut_S_VL.fa
sabdab_dataset/8gut/structure/8gut.pdb
sabdab_dataset/8gut/structure/chothia/8gut.pdb
false
false
train
8guz
A
B
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-FIXa IgG fab with FAST-Ig mutations
Homo sapiens
homo sapiens
homo sapiens
null
Koga, H., Yamano, T., Fukami, T.A., Sampei, Z., Shiraiwa, H., Torizawa, T.
1.79
X-RAY DIFFRACTION
0.273
0.201
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8guz/abangle/8guz.abangle
sabdab_dataset/8guz/annotation/8guz_A_VH.ann
sabdab_dataset/8guz/annotation/8guz_B_VL.ann
sabdab_dataset/8guz/imgt/8guz_A_H.ann
sabdab_dataset/8guz/imgt/8guz_B_L.ann
sabdab_dataset/8guz/sequence/8guz_raw.pdb
sabdab_dataset/8guz/sequence/8guz_A_VH.fa
sabdab_dataset/8guz/sequence/8guz_B_VL.fa
sabdab_dataset/8guz/structure/8guz.pdb
sabdab_dataset/8guz/structure/chothia/8guz.pdb
false
false
train
8guz
C
D
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-FIXa IgG fab with FAST-Ig mutations
Homo sapiens
homo sapiens
homo sapiens
null
Koga, H., Yamano, T., Fukami, T.A., Sampei, Z., Shiraiwa, H., Torizawa, T.
1.79
X-RAY DIFFRACTION
0.273
0.201
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8guz/abangle/8guz.abangle
sabdab_dataset/8guz/annotation/8guz_C_VH.ann
sabdab_dataset/8guz/annotation/8guz_D_VL.ann
sabdab_dataset/8guz/imgt/8guz_C_H.ann
sabdab_dataset/8guz/imgt/8guz_D_L.ann
sabdab_dataset/8guz/sequence/8guz_raw.pdb
sabdab_dataset/8guz/sequence/8guz_C_VH.fa
sabdab_dataset/8guz/sequence/8guz_D_VL.fa
sabdab_dataset/8guz/structure/8guz.pdb
sabdab_dataset/8guz/structure/chothia/8guz.pdb
false
false
validation
8gv0
A
B
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-FIXa IgG fab without FAST-Ig mutations
Homo sapiens
homo sapiens
homo sapiens
null
Koga, H., Yamano, T., Fukami, T.A., Sampei, Z., Shiraiwa, H., Torizawa, T.
3.192
X-RAY DIFFRACTION
0.310
0.196
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8gv0/abangle/8gv0.abangle
sabdab_dataset/8gv0/annotation/8gv0_A_VH.ann
sabdab_dataset/8gv0/annotation/8gv0_B_VL.ann
sabdab_dataset/8gv0/imgt/8gv0_A_H.ann
sabdab_dataset/8gv0/imgt/8gv0_B_L.ann
sabdab_dataset/8gv0/sequence/8gv0_raw.pdb
sabdab_dataset/8gv0/sequence/8gv0_A_VH.fa
sabdab_dataset/8gv0/sequence/8gv0_B_VL.fa
sabdab_dataset/8gv0/structure/8gv0.pdb
sabdab_dataset/8gv0/structure/chothia/8gv0.pdb
true
false
test
8gv0
C
D
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-FIXa IgG fab without FAST-Ig mutations
Homo sapiens
homo sapiens
homo sapiens
null
Koga, H., Yamano, T., Fukami, T.A., Sampei, Z., Shiraiwa, H., Torizawa, T.
3.192
X-RAY DIFFRACTION
0.310
0.196
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8gv0/abangle/8gv0.abangle
sabdab_dataset/8gv0/annotation/8gv0_C_VH.ann
sabdab_dataset/8gv0/annotation/8gv0_D_VL.ann
sabdab_dataset/8gv0/imgt/8gv0_C_H.ann
sabdab_dataset/8gv0/imgt/8gv0_D_L.ann
sabdab_dataset/8gv0/sequence/8gv0_raw.pdb
sabdab_dataset/8gv0/sequence/8gv0_C_VH.fa
sabdab_dataset/8gv0/sequence/8gv0_D_VL.fa
sabdab_dataset/8gv0/structure/8gv0.pdb
sabdab_dataset/8gv0/structure/chothia/8gv0.pdb
true
false
train
8gv0
E
F
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-FIXa IgG fab without FAST-Ig mutations
Homo sapiens
homo sapiens
homo sapiens
null
Koga, H., Yamano, T., Fukami, T.A., Sampei, Z., Shiraiwa, H., Torizawa, T.
3.192
X-RAY DIFFRACTION
0.310
0.196
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8gv0/abangle/8gv0.abangle
sabdab_dataset/8gv0/annotation/8gv0_E_VH.ann
sabdab_dataset/8gv0/annotation/8gv0_F_VL.ann
sabdab_dataset/8gv0/imgt/8gv0_E_H.ann
sabdab_dataset/8gv0/imgt/8gv0_F_L.ann
sabdab_dataset/8gv0/sequence/8gv0_raw.pdb
sabdab_dataset/8gv0/sequence/8gv0_E_VH.fa
sabdab_dataset/8gv0/sequence/8gv0_F_VL.fa
sabdab_dataset/8gv0/structure/8gv0.pdb
sabdab_dataset/8gv0/structure/chothia/8gv0.pdb
true
false
validation
8gv0
G
H
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-FIXa IgG fab without FAST-Ig mutations
Homo sapiens
homo sapiens
homo sapiens
null
Koga, H., Yamano, T., Fukami, T.A., Sampei, Z., Shiraiwa, H., Torizawa, T.
3.192
X-RAY DIFFRACTION
0.310
0.196
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/8gv0/abangle/8gv0.abangle
sabdab_dataset/8gv0/annotation/8gv0_G_VH.ann
sabdab_dataset/8gv0/annotation/8gv0_H_VL.ann
sabdab_dataset/8gv0/imgt/8gv0_G_H.ann
sabdab_dataset/8gv0/imgt/8gv0_H_L.ann
sabdab_dataset/8gv0/sequence/8gv0_raw.pdb
sabdab_dataset/8gv0/sequence/8gv0_G_VH.fa
sabdab_dataset/8gv0/sequence/8gv0_H_VL.fa
sabdab_dataset/8gv0/structure/8gv0.pdb
sabdab_dataset/8gv0/structure/chothia/8gv0.pdb
true
false
train
8gv1
A
B
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-FX IgG fab with FAST-Ig mutations
Homo sapiens
homo sapiens
homo sapiens
null
Koga, H., Yamano, T., Fukami, T.A., Sampei, Z., Shiraiwa, H., Torizawa, T.
1.186
X-RAY DIFFRACTION
0.227
0.206
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/8gv1/abangle/8gv1.abangle
sabdab_dataset/8gv1/annotation/8gv1_A_VH.ann
sabdab_dataset/8gv1/annotation/8gv1_B_VL.ann
sabdab_dataset/8gv1/imgt/8gv1_A_H.ann
sabdab_dataset/8gv1/imgt/8gv1_B_L.ann
sabdab_dataset/8gv1/sequence/8gv1_raw.pdb
sabdab_dataset/8gv1/sequence/8gv1_A_VH.fa
sabdab_dataset/8gv1/sequence/8gv1_B_VL.fa
sabdab_dataset/8gv1/structure/8gv1.pdb
sabdab_dataset/8gv1/structure/chothia/8gv1.pdb
false
false
train
8gv2
A
B
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-FX IgG fab without FAST-Ig mutations
Homo sapiens
homo sapiens
homo sapiens
null
Koga, H., Yamano, T., Fukami, T.A., Sampei, Z., Shiraiwa, H., Torizawa, T.
1.274
X-RAY DIFFRACTION
0.215
0.195
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/8gv2/abangle/8gv2.abangle
sabdab_dataset/8gv2/annotation/8gv2_A_VH.ann
sabdab_dataset/8gv2/annotation/8gv2_B_VL.ann
sabdab_dataset/8gv2/imgt/8gv2_A_H.ann
sabdab_dataset/8gv2/imgt/8gv2_B_L.ann
sabdab_dataset/8gv2/sequence/8gv2_raw.pdb
sabdab_dataset/8gv2/sequence/8gv2_A_VH.fa
sabdab_dataset/8gv2/sequence/8gv2_B_VL.fa
sabdab_dataset/8gv2/structure/8gv2.pdb
sabdab_dataset/8gv2/structure/chothia/8gv2.pdb
true
false
train
8gv4
A
B
0
null
null
null
null
IMMUNE SYSTEM
12/21/22
A human broadly neutralizing influenza A hemagglutinin stem-specific antibody PN-SIA28
Homo sapiens
homo sapiens
homo sapiens
null
Chen, Y., Song, H., Qi, J., Gao, G.F.
2.5
X-RAY DIFFRACTION
0.230
0.195
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gv4/abangle/8gv4.abangle
sabdab_dataset/8gv4/annotation/8gv4_A_VH.ann
sabdab_dataset/8gv4/annotation/8gv4_B_VL.ann
sabdab_dataset/8gv4/imgt/8gv4_A_H.ann
sabdab_dataset/8gv4/imgt/8gv4_B_L.ann
sabdab_dataset/8gv4/sequence/8gv4_raw.pdb
sabdab_dataset/8gv4/sequence/8gv4_A_VH.fa
sabdab_dataset/8gv4/sequence/8gv4_B_VL.fa
sabdab_dataset/8gv4/structure/8gv4.pdb
sabdab_dataset/8gv4/structure/chothia/8gv4.pdb
false
false
validation
8gv4
C
D
0
null
null
null
null
IMMUNE SYSTEM
12/21/22
A human broadly neutralizing influenza A hemagglutinin stem-specific antibody PN-SIA28
Homo sapiens
homo sapiens
homo sapiens
null
Chen, Y., Song, H., Qi, J., Gao, G.F.
2.5
X-RAY DIFFRACTION
0.230
0.195
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gv4/abangle/8gv4.abangle
sabdab_dataset/8gv4/annotation/8gv4_C_VH.ann
sabdab_dataset/8gv4/annotation/8gv4_D_VL.ann
sabdab_dataset/8gv4/imgt/8gv4_C_H.ann
sabdab_dataset/8gv4/imgt/8gv4_D_L.ann
sabdab_dataset/8gv4/sequence/8gv4_raw.pdb
sabdab_dataset/8gv4/sequence/8gv4_C_VH.fa
sabdab_dataset/8gv4/sequence/8gv4_D_VL.fa
sabdab_dataset/8gv4/structure/8gv4.pdb
sabdab_dataset/8gv4/structure/chothia/8gv4.pdb
false
false
train
8gv5
C
D
0
B | A
protein | protein
NA | NA
hemagglutinin ha2 chain | hemagglutinin ha1 chain
VIRAL PROTEIN/IMMUNE SYSTEM
12/21/22
Crystal structure of PN-SIA28 in complex with influenza hemagglutinin A/swine/Guangdong/104/2013 (H1N1)
Homo sapiens; Influenza A virus (A/swine/Guangdong/104/2013(H1N1))
homo sapiens
homo sapiens
influenza a virus(a/swine/guangdong/104/2013(h1n1)) | influenza a virus(a/swine/guangdong/104/2013(h1n1))
Chen, Y., Song, H., Qi, J., Gao, G.F.
3.2
X-RAY DIFFRACTION
0.308
0.267
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gv5/abangle/8gv5.abangle
sabdab_dataset/8gv5/annotation/8gv5_C_VH.ann
sabdab_dataset/8gv5/annotation/8gv5_D_VL.ann
sabdab_dataset/8gv5/imgt/8gv5_C_H.ann
sabdab_dataset/8gv5/imgt/8gv5_D_L.ann
sabdab_dataset/8gv5/sequence/8gv5_raw.pdb
sabdab_dataset/8gv5/sequence/8gv5_C_VH.fa
sabdab_dataset/8gv5/sequence/8gv5_D_VL.fa
sabdab_dataset/8gv5/structure/8gv5.pdb
sabdab_dataset/8gv5/structure/chothia/8gv5.pdb
false
false
train
8gv6
G
H
0
D | C
protein | protein
NA | NA
hemagglutinin h14-ha2 | hemagglutinin h14-ha1
VIRAL PROTEIN/IMMUNE SYSTEM
12/21/22
Crystal structure of PN-SIA28 in complex with influenza hemagglutinin H14 (A/long-tailed duck/Wisconsin/10OS3912/2010)
Homo sapiens; Influenza A virus (A/long-tailed duck/Wisconsin/10OS3912/2010(H14N6))
homo sapiens
homo sapiens
influenza a virus (a/long-tailedduck/wisconsin/10os3912/2010(h14n6)) | influenza a virus (a/long-tailedduck/wisconsin/10os3912/2010(h14n6))
Chen, Y., Song, H., Qi, J., Gao, G.F.
3.4
X-RAY DIFFRACTION
0.261
0.221
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/8gv6/abangle/8gv6.abangle
sabdab_dataset/8gv6/annotation/8gv6_G_VH.ann
sabdab_dataset/8gv6/annotation/8gv6_H_VL.ann
sabdab_dataset/8gv6/imgt/8gv6_G_H.ann
sabdab_dataset/8gv6/imgt/8gv6_H_L.ann
sabdab_dataset/8gv6/sequence/8gv6_raw.pdb
sabdab_dataset/8gv6/sequence/8gv6_G_VH.fa
sabdab_dataset/8gv6/sequence/8gv6_H_VL.fa
sabdab_dataset/8gv6/structure/8gv6.pdb
sabdab_dataset/8gv6/structure/chothia/8gv6.pdb
true
true
validation