pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 365
values | r_factor stringclasses 358
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values | abangle stringlengths 40 40 ⌀ | annotation_H stringlengths 44 44 ⌀ | annotation_L stringlengths 44 44 ⌀ | imgt_H stringlengths 37 37 ⌀ | imgt_L stringlengths 37 37 ⌀ | sequence_raw stringlengths 41 41 | sequence_H stringlengths 41 41 ⌀ | sequence_L stringlengths 41 41 ⌀ | structure stringlengths 38 38 | structure_chothia stringlengths 46 46 | in_nr_set bool 2
classes | curated_quality_dataset bool 2
classes | split stringclasses 3
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8sdf | H | L | 0 | Z | protein | null | spike protein s1 | IMMUNE SYSTEM | 03/13/24 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.4 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Wilson, I.A. | 1.79 | X-RAY DIFFRACTION | 0.218 | 0.186 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8sdf/abangle/8sdf.abangle | sabdab_dataset/8sdf/annotation/8sdf_H_VH.ann | sabdab_dataset/8sdf/annotation/8sdf_L_VL.ann | sabdab_dataset/8sdf/imgt/8sdf_H_H.ann | sabdab_dataset/8sdf/imgt/8sdf_L_L.ann | sabdab_dataset/8sdf/sequence/8sdf_raw.pdb | sabdab_dataset/8sdf/sequence/8sdf_H_VH.fa | sabdab_dataset/8sdf/sequence/8sdf_L_VL.fa | sabdab_dataset/8sdf/structure/8sdf.pdb | sabdab_dataset/8sdf/structure/chothia/8sdf.pdb | false | false | train |
8sdg | A | B | 0 | D | protein | null | spike protein s1 | IMMUNE SYSTEM | 03/13/24 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.43 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Wilson, I.A. | 2.71 | X-RAY DIFFRACTION | 0.308 | 0.255 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8sdg/abangle/8sdg.abangle | sabdab_dataset/8sdg/annotation/8sdg_A_VH.ann | sabdab_dataset/8sdg/annotation/8sdg_B_VL.ann | sabdab_dataset/8sdg/imgt/8sdg_A_H.ann | sabdab_dataset/8sdg/imgt/8sdg_B_L.ann | sabdab_dataset/8sdg/sequence/8sdg_raw.pdb | sabdab_dataset/8sdg/sequence/8sdg_A_VH.fa | sabdab_dataset/8sdg/sequence/8sdg_B_VL.fa | sabdab_dataset/8sdg/structure/8sdg.pdb | sabdab_dataset/8sdg/structure/chothia/8sdg.pdb | true | false | train |
8sdg | G | I | 0 | C | protein | null | spike protein s1 | IMMUNE SYSTEM | 03/13/24 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.43 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Wilson, I.A. | 2.71 | X-RAY DIFFRACTION | 0.308 | 0.255 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8sdg/abangle/8sdg.abangle | sabdab_dataset/8sdg/annotation/8sdg_G_VH.ann | sabdab_dataset/8sdg/annotation/8sdg_I_VL.ann | sabdab_dataset/8sdg/imgt/8sdg_G_H.ann | sabdab_dataset/8sdg/imgt/8sdg_I_L.ann | sabdab_dataset/8sdg/sequence/8sdg_raw.pdb | sabdab_dataset/8sdg/sequence/8sdg_G_VH.fa | sabdab_dataset/8sdg/sequence/8sdg_I_VL.fa | sabdab_dataset/8sdg/structure/8sdg.pdb | sabdab_dataset/8sdg/structure/chothia/8sdg.pdb | true | false | train |
8sdh | C | D | 0 | A | protein | null | spike protein s1 | IMMUNE SYSTEM | 08/07/24 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.56 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Wilson, I.A. | 2.84 | X-RAY DIFFRACTION | 0.283 | 0.246 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8sdh/abangle/8sdh.abangle | sabdab_dataset/8sdh/annotation/8sdh_C_VH.ann | sabdab_dataset/8sdh/annotation/8sdh_D_VL.ann | sabdab_dataset/8sdh/imgt/8sdh_C_H.ann | sabdab_dataset/8sdh/imgt/8sdh_D_L.ann | sabdab_dataset/8sdh/sequence/8sdh_raw.pdb | sabdab_dataset/8sdh/sequence/8sdh_C_VH.fa | sabdab_dataset/8sdh/sequence/8sdh_D_VL.fa | sabdab_dataset/8sdh/structure/8sdh.pdb | sabdab_dataset/8sdh/structure/chothia/8sdh.pdb | true | false | test |
8sdh | H | L | 0 | B | protein | null | spike protein s1 | IMMUNE SYSTEM | 08/07/24 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.56 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Wilson, I.A. | 2.84 | X-RAY DIFFRACTION | 0.283 | 0.246 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8sdh/abangle/8sdh.abangle | sabdab_dataset/8sdh/annotation/8sdh_H_VH.ann | sabdab_dataset/8sdh/annotation/8sdh_L_VL.ann | sabdab_dataset/8sdh/imgt/8sdh_H_H.ann | sabdab_dataset/8sdh/imgt/8sdh_L_L.ann | sabdab_dataset/8sdh/sequence/8sdh_raw.pdb | sabdab_dataset/8sdh/sequence/8sdh_H_VH.fa | sabdab_dataset/8sdh/sequence/8sdh_L_VL.fa | sabdab_dataset/8sdh/structure/8sdh.pdb | sabdab_dataset/8sdh/structure/chothia/8sdh.pdb | true | false | train |
8sef | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/17/24 | Crystal structure of Cy137C02, a monoclonal antibody isolated from macaques immunized with an Epstein-Barr virus glycoprotein 350 (gp350) nanoparticle vaccine | Macaca fascicularis | macaca fascicularis | macaca fascicularis | null | Joyce, M.G., Jensen, J.L., Chen, W.H., Kanekiyo, M. | 2.47 | X-RAY DIFFRACTION | 0.264 | 0.222 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8sef/abangle/8sef.abangle | sabdab_dataset/8sef/annotation/8sef_H_VH.ann | sabdab_dataset/8sef/annotation/8sef_L_VL.ann | sabdab_dataset/8sef/imgt/8sef_H_H.ann | sabdab_dataset/8sef/imgt/8sef_L_L.ann | sabdab_dataset/8sef/sequence/8sef_raw.pdb | sabdab_dataset/8sef/sequence/8sef_H_VH.fa | sabdab_dataset/8sef/sequence/8sef_L_VL.fa | sabdab_dataset/8sef/structure/8sef.pdb | sabdab_dataset/8sef/structure/chothia/8sef.pdb | true | false | train |
8sfs | C | null | 0 | B | protein | null | green fluorescent protein | IMMUNE SYSTEM | 05/22/24 | High Affinity nanobodies against GFP | Aequorea victoria; Lama glama | lama glama | null | aequorea victoria | Ketaren, N.E., Rout, M.P., Bonnano, J.B., Almo, S.C. | 2.37 | X-RAY DIFFRACTION | 0.218 | 0.19 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sfs/annotation/8sfs_C_VH.ann | null | sabdab_dataset/8sfs/imgt/8sfs_C_H.ann | null | sabdab_dataset/8sfs/sequence/8sfs_raw.pdb | sabdab_dataset/8sfs/sequence/8sfs_C_VH.fa | null | sabdab_dataset/8sfs/structure/8sfs.pdb | sabdab_dataset/8sfs/structure/chothia/8sfs.pdb | true | true | validation |
8sfs | D | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/22/24 | High Affinity nanobodies against GFP | Aequorea victoria; Lama glama | lama glama | null | null | Ketaren, N.E., Rout, M.P., Bonnano, J.B., Almo, S.C. | 2.37 | X-RAY DIFFRACTION | 0.218 | 0.19 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sfs/annotation/8sfs_D_VH.ann | null | sabdab_dataset/8sfs/imgt/8sfs_D_H.ann | null | sabdab_dataset/8sfs/sequence/8sfs_raw.pdb | sabdab_dataset/8sfs/sequence/8sfs_D_VH.fa | null | sabdab_dataset/8sfs/structure/8sfs.pdb | sabdab_dataset/8sfs/structure/chothia/8sfs.pdb | true | false | train |
8sfv | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/22/24 | High affinity nanobodies to GFP | Aequorea victoria; Lama glama | lama glama | null | null | Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C. | 1.83 | X-RAY DIFFRACTION | 0.206 | 0.183 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sfv/annotation/8sfv_B_VH.ann | null | sabdab_dataset/8sfv/imgt/8sfv_B_H.ann | null | sabdab_dataset/8sfv/sequence/8sfv_raw.pdb | sabdab_dataset/8sfv/sequence/8sfv_B_VH.fa | null | sabdab_dataset/8sfv/structure/8sfv.pdb | sabdab_dataset/8sfv/structure/chothia/8sfv.pdb | true | false | train |
8sfx | C | null | 0 | A | protein | null | green fluorescent protein | IMMUNE SYSTEM | 05/22/24 | High Affinity nanobodies against GFP | Aequorea victoria; Lama glama | lama glama | null | aequorea victoria | Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C. | 1.95 | X-RAY DIFFRACTION | 0.228 | 0.21 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sfx/annotation/8sfx_C_VH.ann | null | sabdab_dataset/8sfx/imgt/8sfx_C_H.ann | null | sabdab_dataset/8sfx/sequence/8sfx_raw.pdb | sabdab_dataset/8sfx/sequence/8sfx_C_VH.fa | null | sabdab_dataset/8sfx/structure/8sfx.pdb | sabdab_dataset/8sfx/structure/chothia/8sfx.pdb | true | true | train |
8sfx | D | null | 0 | B | protein | null | green fluorescent protein | IMMUNE SYSTEM | 05/22/24 | High Affinity nanobodies against GFP | Aequorea victoria; Lama glama | lama glama | null | aequorea victoria | Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C. | 1.95 | X-RAY DIFFRACTION | 0.228 | 0.21 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sfx/annotation/8sfx_D_VH.ann | null | sabdab_dataset/8sfx/imgt/8sfx_D_H.ann | null | sabdab_dataset/8sfx/sequence/8sfx_raw.pdb | sabdab_dataset/8sfx/sequence/8sfx_D_VH.fa | null | sabdab_dataset/8sfx/structure/8sfx.pdb | sabdab_dataset/8sfx/structure/chothia/8sfx.pdb | true | false | train |
8sfz | A | null | 0 | F | protein | null | green fluorescent protein | IMMUNE SYSTEM | 05/22/24 | High Affinity nanobodies against GFP | Aequorea victoria; Lama glama | lama glama | null | aequorea victoria | Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C. | 1.9 | X-RAY DIFFRACTION | 0.231 | 0.207 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sfz/annotation/8sfz_A_VH.ann | null | sabdab_dataset/8sfz/imgt/8sfz_A_H.ann | null | sabdab_dataset/8sfz/sequence/8sfz_raw.pdb | sabdab_dataset/8sfz/sequence/8sfz_A_VH.fa | null | sabdab_dataset/8sfz/structure/8sfz.pdb | sabdab_dataset/8sfz/structure/chothia/8sfz.pdb | true | true | test |
8sfz | B | null | 0 | F | protein | null | green fluorescent protein | IMMUNE SYSTEM | 05/22/24 | High Affinity nanobodies against GFP | Aequorea victoria; Lama glama | lama glama | null | aequorea victoria | Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C. | 1.9 | X-RAY DIFFRACTION | 0.231 | 0.207 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sfz/annotation/8sfz_B_VH.ann | null | sabdab_dataset/8sfz/imgt/8sfz_B_H.ann | null | sabdab_dataset/8sfz/sequence/8sfz_raw.pdb | sabdab_dataset/8sfz/sequence/8sfz_B_VH.fa | null | sabdab_dataset/8sfz/structure/8sfz.pdb | sabdab_dataset/8sfz/structure/chothia/8sfz.pdb | true | false | train |
8sfz | C | null | 0 | D | protein | null | green fluorescent protein | IMMUNE SYSTEM | 05/22/24 | High Affinity nanobodies against GFP | Aequorea victoria; Lama glama | lama glama | null | aequorea victoria | Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C. | 1.9 | X-RAY DIFFRACTION | 0.231 | 0.207 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sfz/annotation/8sfz_C_VH.ann | null | sabdab_dataset/8sfz/imgt/8sfz_C_H.ann | null | sabdab_dataset/8sfz/sequence/8sfz_raw.pdb | sabdab_dataset/8sfz/sequence/8sfz_C_VH.fa | null | sabdab_dataset/8sfz/structure/8sfz.pdb | sabdab_dataset/8sfz/structure/chothia/8sfz.pdb | true | false | train |
8sg1 | E | e | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN | 11/01/23 | Cryo-EM structure of CMKLR1 signaling complex | Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | homo sapiens | Zhang, X., Zhang, C. | 2.94 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8sg1/abangle/8sg1.abangle | sabdab_dataset/8sg1/annotation/8sg1_E_VH.ann | sabdab_dataset/8sg1/annotation/8sg1_E_VL.ann | sabdab_dataset/8sg1/imgt/8sg1_E_H.ann | sabdab_dataset/8sg1/imgt/8sg1_E_L.ann | sabdab_dataset/8sg1/sequence/8sg1_raw.pdb | sabdab_dataset/8sg1/sequence/8sg1_E_VH.fa | sabdab_dataset/8sg1/sequence/8sg1_E_VL.fa | sabdab_dataset/8sg1/structure/8sg1.pdb | sabdab_dataset/8sg1/structure/chothia/8sg1.pdb | false | false | train |
8sg3 | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/22/24 | High Affinity nanobodies against GFP | Aequorea victoria; Lama glama | lama glama | null | null | Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C. | 3.11 | X-RAY DIFFRACTION | 0.304 | 0.273 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sg3/annotation/8sg3_B_VH.ann | null | sabdab_dataset/8sg3/imgt/8sg3_B_H.ann | null | sabdab_dataset/8sg3/sequence/8sg3_raw.pdb | sabdab_dataset/8sg3/sequence/8sg3_B_VH.fa | null | sabdab_dataset/8sg3/structure/8sg3.pdb | sabdab_dataset/8sg3/structure/chothia/8sg3.pdb | false | false | train |
8sga | H | L | 0 | B | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | IMMUNE SYSTEM | 04/17/24 | Crystal structure of 770E11, a monoclonal antibody isolated from a human Epstein-Barr virus seropositive donor | Homo sapiens | homo sapiens | homo sapiens | null | Chen, W.H., Jensen, J.L., Joyce, M.G. | 1.9 | X-RAY DIFFRACTION | 0.242 | 0.206 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8sga/abangle/8sga.abangle | sabdab_dataset/8sga/annotation/8sga_H_VH.ann | sabdab_dataset/8sga/annotation/8sga_L_VL.ann | sabdab_dataset/8sga/imgt/8sga_H_H.ann | sabdab_dataset/8sga/imgt/8sga_L_L.ann | sabdab_dataset/8sga/sequence/8sga_raw.pdb | sabdab_dataset/8sga/sequence/8sga_H_VH.fa | sabdab_dataset/8sga/sequence/8sga_L_VL.fa | sabdab_dataset/8sga/structure/8sga.pdb | sabdab_dataset/8sga/structure/chothia/8sga.pdb | true | false | train |
8sgg | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 04/17/24 | Crystal structure of Cy137D09, a monoclonal antibody isolated from macaques immunized with an Epstein-Barr virus glycoprotein 350 (gp350) nanoparticle vaccine | Macaca fascicularis | macaca fascicularis | macaca fascicularis | null | Joyce, M.G., Jensen, J.L., Chen, W.H., Kanekiyo, M. | 2.03 | X-RAY DIFFRACTION | 0.247 | 0.191 | false | true | IGHV4 | IGLV5 | Lambda | null | null | null | null | null | sabdab_dataset/8sgg/abangle/8sgg.abangle | sabdab_dataset/8sgg/annotation/8sgg_A_VH.ann | sabdab_dataset/8sgg/annotation/8sgg_B_VL.ann | sabdab_dataset/8sgg/imgt/8sgg_A_H.ann | sabdab_dataset/8sgg/imgt/8sgg_B_L.ann | sabdab_dataset/8sgg/sequence/8sgg_raw.pdb | sabdab_dataset/8sgg/sequence/8sgg_A_VH.fa | sabdab_dataset/8sgg/sequence/8sgg_B_VL.fa | sabdab_dataset/8sgg/structure/8sgg.pdb | sabdab_dataset/8sgg/structure/chothia/8sgg.pdb | true | false | validation |
8sgg | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 04/17/24 | Crystal structure of Cy137D09, a monoclonal antibody isolated from macaques immunized with an Epstein-Barr virus glycoprotein 350 (gp350) nanoparticle vaccine | Macaca fascicularis | macaca fascicularis | macaca fascicularis | null | Joyce, M.G., Jensen, J.L., Chen, W.H., Kanekiyo, M. | 2.03 | X-RAY DIFFRACTION | 0.247 | 0.191 | false | true | IGHV4 | IGLV5 | Lambda | null | null | null | null | null | sabdab_dataset/8sgg/abangle/8sgg.abangle | sabdab_dataset/8sgg/annotation/8sgg_C_VH.ann | sabdab_dataset/8sgg/annotation/8sgg_D_VL.ann | sabdab_dataset/8sgg/imgt/8sgg_C_H.ann | sabdab_dataset/8sgg/imgt/8sgg_D_L.ann | sabdab_dataset/8sgg/sequence/8sgg_raw.pdb | sabdab_dataset/8sgg/sequence/8sgg_C_VH.fa | sabdab_dataset/8sgg/sequence/8sgg_D_VL.fa | sabdab_dataset/8sgg/structure/8sgg.pdb | sabdab_dataset/8sgg/structure/chothia/8sgg.pdb | true | false | test |
8sgi | H | L | 0 | A | protein | null | sodium/calcium exchanger 1 | TRANSPORT PROTEIN | 04/24/24 | Cryo-EM structure of human NCX1 in complex with SEA0400 | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Xue, J., Jiang, Y. | 2.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8sgi/abangle/8sgi.abangle | sabdab_dataset/8sgi/annotation/8sgi_H_VH.ann | sabdab_dataset/8sgi/annotation/8sgi_L_VL.ann | sabdab_dataset/8sgi/imgt/8sgi_H_H.ann | sabdab_dataset/8sgi/imgt/8sgi_L_L.ann | sabdab_dataset/8sgi/sequence/8sgi_raw.pdb | sabdab_dataset/8sgi/sequence/8sgi_H_VH.fa | sabdab_dataset/8sgi/sequence/8sgi_L_VL.fa | sabdab_dataset/8sgi/structure/8sgi.pdb | sabdab_dataset/8sgi/structure/chothia/8sgi.pdb | false | false | train |
8sgj | H | L | 0 | A | protein | null | sodium/calcium exchanger 1 | TRANSPORT PROTEIN | 10/11/23 | Cryo-EM structure of human NCX1 in apo inactivated state | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Xue, J., Jiang, Y. | 3.1 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8sgj/abangle/8sgj.abangle | sabdab_dataset/8sgj/annotation/8sgj_H_VH.ann | sabdab_dataset/8sgj/annotation/8sgj_L_VL.ann | sabdab_dataset/8sgj/imgt/8sgj_H_H.ann | sabdab_dataset/8sgj/imgt/8sgj_L_L.ann | sabdab_dataset/8sgj/sequence/8sgj_raw.pdb | sabdab_dataset/8sgj/sequence/8sgj_H_VH.fa | sabdab_dataset/8sgj/sequence/8sgj_L_VL.fa | sabdab_dataset/8sgj/structure/8sgj.pdb | sabdab_dataset/8sgj/structure/chothia/8sgj.pdb | false | false | train |
8sgn | H | L | 0 | G | protein | null | envelope glycoprotein gp350 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/17/24 | Crystal structure of Epstein-Barr virus glycoprotein 350 (gp350) in complex with Cy651H02, a monoclonal antibody isolated from macaques immunized with a gp350 nanoparticle vaccine | Human herpesvirus 4; Macaca fascicularis | macaca fascicularis | macaca fascicularis | human herpesvirus 4 | Joyce, M.G., Jensen, J.L., Chen, W.H., Kanekiyo, M. | 2.2 | X-RAY DIFFRACTION | 0.237 | 0.193 | false | true | IGHV4 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/8sgn/abangle/8sgn.abangle | sabdab_dataset/8sgn/annotation/8sgn_H_VH.ann | sabdab_dataset/8sgn/annotation/8sgn_L_VL.ann | sabdab_dataset/8sgn/imgt/8sgn_H_H.ann | sabdab_dataset/8sgn/imgt/8sgn_L_L.ann | sabdab_dataset/8sgn/sequence/8sgn_raw.pdb | sabdab_dataset/8sgn/sequence/8sgn_H_VH.fa | sabdab_dataset/8sgn/sequence/8sgn_L_VL.fa | sabdab_dataset/8sgn/structure/8sgn.pdb | sabdab_dataset/8sgn/structure/chothia/8sgn.pdb | true | false | validation |
8sgo | J | I | 0 | B | protein | null | gamma-aminobutyric acid receptor subunit alpha-1 | TRANSPORT PROTEIN/IMMUNE SYSTEM | 08/30/23 | Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus pregnenolone sulfate | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Legesse, D.H., Fan, C., Teng, J., Zhuang, Y., Howard, R.J., Noviello, C.M., Lindahl, E., Hibbs, R.E. | 2.65 | ELECTRON MICROSCOPY | null | null | false | true | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/8sgo/abangle/8sgo.abangle | sabdab_dataset/8sgo/annotation/8sgo_J_VH.ann | sabdab_dataset/8sgo/annotation/8sgo_I_VL.ann | sabdab_dataset/8sgo/imgt/8sgo_J_H.ann | sabdab_dataset/8sgo/imgt/8sgo_I_L.ann | sabdab_dataset/8sgo/sequence/8sgo_raw.pdb | sabdab_dataset/8sgo/sequence/8sgo_J_VH.fa | sabdab_dataset/8sgo/sequence/8sgo_I_VL.fa | sabdab_dataset/8sgo/structure/8sgo.pdb | sabdab_dataset/8sgo/structure/chothia/8sgo.pdb | false | false | train |
8sgo | K | L | 0 | D | protein | null | gamma-aminobutyric acid receptor subunit alpha-1 | TRANSPORT PROTEIN/IMMUNE SYSTEM | 08/30/23 | Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus pregnenolone sulfate | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Legesse, D.H., Fan, C., Teng, J., Zhuang, Y., Howard, R.J., Noviello, C.M., Lindahl, E., Hibbs, R.E. | 2.65 | ELECTRON MICROSCOPY | null | null | false | true | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/8sgo/abangle/8sgo.abangle | sabdab_dataset/8sgo/annotation/8sgo_K_VH.ann | sabdab_dataset/8sgo/annotation/8sgo_L_VL.ann | sabdab_dataset/8sgo/imgt/8sgo_K_H.ann | sabdab_dataset/8sgo/imgt/8sgo_L_L.ann | sabdab_dataset/8sgo/sequence/8sgo_raw.pdb | sabdab_dataset/8sgo/sequence/8sgo_K_VH.fa | sabdab_dataset/8sgo/sequence/8sgo_L_VL.fa | sabdab_dataset/8sgo/structure/8sgo.pdb | sabdab_dataset/8sgo/structure/chothia/8sgo.pdb | false | false | train |
8sgt | H | L | 0 | A | protein | null | sodium/calcium exchanger 1 | TRANSPORT PROTEIN | 10/11/23 | Cryo-EM structure of human NCX1 in Ca2+ bound, activated state (group II in the presence of 0.5 mM Ca2+) | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Xue, J., Jiang, Y. | 3.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8sgt/abangle/8sgt.abangle | sabdab_dataset/8sgt/annotation/8sgt_H_VH.ann | sabdab_dataset/8sgt/annotation/8sgt_L_VL.ann | sabdab_dataset/8sgt/imgt/8sgt_H_H.ann | sabdab_dataset/8sgt/imgt/8sgt_L_L.ann | sabdab_dataset/8sgt/sequence/8sgt_raw.pdb | sabdab_dataset/8sgt/sequence/8sgt_H_VH.fa | sabdab_dataset/8sgt/sequence/8sgt_L_VL.fa | sabdab_dataset/8sgt/structure/8sgt.pdb | sabdab_dataset/8sgt/structure/chothia/8sgt.pdb | false | false | train |
8sh5 | H | L | 0 | R | nucleic-acid | null | rna (88-mer) | RNA/IMMUNE SYSTEM | 08/16/23 | Crystal structure of 3'cap-independent translation enhancers (CITE) from Pea enation mosaic virus RNA 2 (PEMV2) with Fab BL3-6K170A | Mus musculus; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | pea enation mosaic virus 2 | Lewicka, A., Roman, C., Rice, P.A., Piccirilli, J.A. | 2.75 | X-RAY DIFFRACTION | 0.297 | 0.251 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8sh5/abangle/8sh5.abangle | sabdab_dataset/8sh5/annotation/8sh5_H_VH.ann | sabdab_dataset/8sh5/annotation/8sh5_L_VL.ann | sabdab_dataset/8sh5/imgt/8sh5_H_H.ann | sabdab_dataset/8sh5/imgt/8sh5_L_L.ann | sabdab_dataset/8sh5/sequence/8sh5_raw.pdb | sabdab_dataset/8sh5/sequence/8sh5_H_VH.fa | sabdab_dataset/8sh5/sequence/8sh5_L_VL.fa | sabdab_dataset/8sh5/structure/8sh5.pdb | sabdab_dataset/8sh5/structure/chothia/8sh5.pdb | false | false | train |
8shv | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/25/24 | 38B7 unliganded | Homo sapiens | homo sapiens | homo sapiens | null | Spiller, B.W., Shrem, R.A. | 1.58 | X-RAY DIFFRACTION | 0.178 | 0.164 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8shv/abangle/8shv.abangle | sabdab_dataset/8shv/annotation/8shv_H_VH.ann | sabdab_dataset/8shv/annotation/8shv_L_VL.ann | sabdab_dataset/8shv/imgt/8shv_H_H.ann | sabdab_dataset/8shv/imgt/8shv_L_L.ann | sabdab_dataset/8shv/sequence/8shv_raw.pdb | sabdab_dataset/8shv/sequence/8shv_H_VH.fa | sabdab_dataset/8shv/sequence/8shv_L_VL.fa | sabdab_dataset/8shv/structure/8shv.pdb | sabdab_dataset/8shv/structure/chothia/8shv.pdb | true | false | test |
8shw | C | A | 0 | B | peptide | null | conglutin-7 | IMMUNE SYSTEM | 12/25/24 | 38B7 with hydroxy-proline peptide | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 1.95 | X-RAY DIFFRACTION | 0.205 | 0.178 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8shw/abangle/8shw.abangle | sabdab_dataset/8shw/annotation/8shw_C_VH.ann | sabdab_dataset/8shw/annotation/8shw_A_VL.ann | sabdab_dataset/8shw/imgt/8shw_C_H.ann | sabdab_dataset/8shw/imgt/8shw_A_L.ann | sabdab_dataset/8shw/sequence/8shw_raw.pdb | sabdab_dataset/8shw/sequence/8shw_C_VH.fa | sabdab_dataset/8shw/sequence/8shw_A_VL.fa | sabdab_dataset/8shw/structure/8shw.pdb | sabdab_dataset/8shw/structure/chothia/8shw.pdb | true | false | train |
8shw | H | L | 0 | Q | peptide | null | conglutin-7 | IMMUNE SYSTEM | 12/25/24 | 38B7 with hydroxy-proline peptide | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 1.95 | X-RAY DIFFRACTION | 0.205 | 0.178 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8shw/abangle/8shw.abangle | sabdab_dataset/8shw/annotation/8shw_H_VH.ann | sabdab_dataset/8shw/annotation/8shw_L_VL.ann | sabdab_dataset/8shw/imgt/8shw_H_H.ann | sabdab_dataset/8shw/imgt/8shw_L_L.ann | sabdab_dataset/8shw/sequence/8shw_raw.pdb | sabdab_dataset/8shw/sequence/8shw_H_VH.fa | sabdab_dataset/8shw/sequence/8shw_L_VL.fa | sabdab_dataset/8shw/structure/8shw.pdb | sabdab_dataset/8shw/structure/chothia/8shw.pdb | true | false | train |
8si1 | B | A | 0 | F | protein | null | conglutin | IMMUNE SYSTEM | 12/25/24 | Ara h 6 16A8 complex | Arachis hypogaea; Homo sapiens | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 3.2 | X-RAY DIFFRACTION | 0.300 | 0.247 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8si1/abangle/8si1.abangle | sabdab_dataset/8si1/annotation/8si1_B_VH.ann | sabdab_dataset/8si1/annotation/8si1_A_VL.ann | sabdab_dataset/8si1/imgt/8si1_B_H.ann | sabdab_dataset/8si1/imgt/8si1_A_L.ann | sabdab_dataset/8si1/sequence/8si1_raw.pdb | sabdab_dataset/8si1/sequence/8si1_B_VH.fa | sabdab_dataset/8si1/sequence/8si1_A_VL.fa | sabdab_dataset/8si1/structure/8si1.pdb | sabdab_dataset/8si1/structure/chothia/8si1.pdb | true | false | train |
8si1 | D | C | 0 | G | protein | null | conglutin | IMMUNE SYSTEM | 12/25/24 | Ara h 6 16A8 complex | Arachis hypogaea; Homo sapiens | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 3.2 | X-RAY DIFFRACTION | 0.300 | 0.247 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8si1/abangle/8si1.abangle | sabdab_dataset/8si1/annotation/8si1_D_VH.ann | sabdab_dataset/8si1/annotation/8si1_C_VL.ann | sabdab_dataset/8si1/imgt/8si1_D_H.ann | sabdab_dataset/8si1/imgt/8si1_C_L.ann | sabdab_dataset/8si1/sequence/8si1_raw.pdb | sabdab_dataset/8si1/sequence/8si1_D_VH.fa | sabdab_dataset/8si1/sequence/8si1_C_VL.fa | sabdab_dataset/8si1/structure/8si1.pdb | sabdab_dataset/8si1/structure/chothia/8si1.pdb | true | false | train |
8si1 | H | L | 0 | E | protein | null | conglutin | IMMUNE SYSTEM | 12/25/24 | Ara h 6 16A8 complex | Arachis hypogaea; Homo sapiens | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 3.2 | X-RAY DIFFRACTION | 0.300 | 0.247 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8si1/abangle/8si1.abangle | sabdab_dataset/8si1/annotation/8si1_H_VH.ann | sabdab_dataset/8si1/annotation/8si1_L_VL.ann | sabdab_dataset/8si1/imgt/8si1_H_H.ann | sabdab_dataset/8si1/imgt/8si1_L_L.ann | sabdab_dataset/8si1/sequence/8si1_raw.pdb | sabdab_dataset/8si1/sequence/8si1_H_VH.fa | sabdab_dataset/8si1/sequence/8si1_L_VL.fa | sabdab_dataset/8si1/structure/8si1.pdb | sabdab_dataset/8si1/structure/chothia/8si1.pdb | true | false | train |
8si9 | J | I | 0 | B | protein | null | gamma-aminobutyric acid receptor subunit alpha-1 | TRANSPORT PROTEIN | 08/30/23 | Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus allopregnanolone | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Legesse, D.H., Hibbs, R.E. | 2.98 | ELECTRON MICROSCOPY | null | null | false | true | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/8si9/abangle/8si9.abangle | sabdab_dataset/8si9/annotation/8si9_J_VH.ann | sabdab_dataset/8si9/annotation/8si9_I_VL.ann | sabdab_dataset/8si9/imgt/8si9_J_H.ann | sabdab_dataset/8si9/imgt/8si9_I_L.ann | sabdab_dataset/8si9/sequence/8si9_raw.pdb | sabdab_dataset/8si9/sequence/8si9_J_VH.fa | sabdab_dataset/8si9/sequence/8si9_I_VL.fa | sabdab_dataset/8si9/structure/8si9.pdb | sabdab_dataset/8si9/structure/chothia/8si9.pdb | false | false | train |
8si9 | K | L | 0 | D | protein | null | gamma-aminobutyric acid receptor subunit alpha-1 | TRANSPORT PROTEIN | 08/30/23 | Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus allopregnanolone | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Legesse, D.H., Hibbs, R.E. | 2.98 | ELECTRON MICROSCOPY | null | null | false | true | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/8si9/abangle/8si9.abangle | sabdab_dataset/8si9/annotation/8si9_K_VH.ann | sabdab_dataset/8si9/annotation/8si9_L_VL.ann | sabdab_dataset/8si9/imgt/8si9_K_H.ann | sabdab_dataset/8si9/imgt/8si9_L_L.ann | sabdab_dataset/8si9/sequence/8si9_raw.pdb | sabdab_dataset/8si9/sequence/8si9_K_VH.fa | sabdab_dataset/8si9/sequence/8si9_L_VL.fa | sabdab_dataset/8si9/structure/8si9.pdb | sabdab_dataset/8si9/structure/chothia/8si9.pdb | false | false | validation |
8sic | A | B | 0 | E | protein | null | envelope glycoprotein gp350 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/17/24 | Crystal structure of Epstein-Barr virus glycoprotein 350 (gp350) in complex with Cy137C02, a monoclonal antibody isolated from macaques immunized with a gp350 nanoparticle vaccine | Human herpesvirus 4; Macaca fascicularis | macaca fascicularis | macaca fascicularis | human herpesvirus 4 | Joyce, M.G., Jensen, J.L., Chen, W.H., Kanekiyo, M. | 2.76 | X-RAY DIFFRACTION | 0.295 | 0.246 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8sic/abangle/8sic.abangle | sabdab_dataset/8sic/annotation/8sic_A_VH.ann | sabdab_dataset/8sic/annotation/8sic_B_VL.ann | sabdab_dataset/8sic/imgt/8sic_A_H.ann | sabdab_dataset/8sic/imgt/8sic_B_L.ann | sabdab_dataset/8sic/sequence/8sic_raw.pdb | sabdab_dataset/8sic/sequence/8sic_A_VH.fa | sabdab_dataset/8sic/sequence/8sic_B_VL.fa | sabdab_dataset/8sic/structure/8sic.pdb | sabdab_dataset/8sic/structure/chothia/8sic.pdb | true | false | train |
8sic | H | L | 0 | G | protein | null | envelope glycoprotein gp350 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/17/24 | Crystal structure of Epstein-Barr virus glycoprotein 350 (gp350) in complex with Cy137C02, a monoclonal antibody isolated from macaques immunized with a gp350 nanoparticle vaccine | Human herpesvirus 4; Macaca fascicularis | macaca fascicularis | macaca fascicularis | human herpesvirus 4 | Joyce, M.G., Jensen, J.L., Chen, W.H., Kanekiyo, M. | 2.76 | X-RAY DIFFRACTION | 0.295 | 0.246 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8sic/abangle/8sic.abangle | sabdab_dataset/8sic/annotation/8sic_H_VH.ann | sabdab_dataset/8sic/annotation/8sic_L_VL.ann | sabdab_dataset/8sic/imgt/8sic_H_H.ann | sabdab_dataset/8sic/imgt/8sic_L_L.ann | sabdab_dataset/8sic/sequence/8sic_raw.pdb | sabdab_dataset/8sic/sequence/8sic_H_VH.fa | sabdab_dataset/8sic/sequence/8sic_L_VL.fa | sabdab_dataset/8sic/structure/8sic.pdb | sabdab_dataset/8sic/structure/chothia/8sic.pdb | true | false | train |
8sid | J | I | 0 | B | protein | null | gamma-aminobutyric acid receptor subunit alpha-1 | TRANSPORT PROTEIN | 08/30/23 | Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus dehydroepiandrosterone sulfate | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Legesse, D.H., Hibbs, R.E. | 2.71 | ELECTRON MICROSCOPY | null | null | false | true | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/8sid/abangle/8sid.abangle | sabdab_dataset/8sid/annotation/8sid_J_VH.ann | sabdab_dataset/8sid/annotation/8sid_I_VL.ann | sabdab_dataset/8sid/imgt/8sid_J_H.ann | sabdab_dataset/8sid/imgt/8sid_I_L.ann | sabdab_dataset/8sid/sequence/8sid_raw.pdb | sabdab_dataset/8sid/sequence/8sid_J_VH.fa | sabdab_dataset/8sid/sequence/8sid_I_VL.fa | sabdab_dataset/8sid/structure/8sid.pdb | sabdab_dataset/8sid/structure/chothia/8sid.pdb | false | false | train |
8sid | K | L | 0 | D | protein | null | gamma-aminobutyric acid receptor subunit alpha-1 | TRANSPORT PROTEIN | 08/30/23 | Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus dehydroepiandrosterone sulfate | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Legesse, D.H., Hibbs, R.E. | 2.71 | ELECTRON MICROSCOPY | null | null | false | true | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/8sid/abangle/8sid.abangle | sabdab_dataset/8sid/annotation/8sid_K_VH.ann | sabdab_dataset/8sid/annotation/8sid_L_VL.ann | sabdab_dataset/8sid/imgt/8sid_K_H.ann | sabdab_dataset/8sid/imgt/8sid_L_L.ann | sabdab_dataset/8sid/sequence/8sid_raw.pdb | sabdab_dataset/8sid/sequence/8sid_K_VH.fa | sabdab_dataset/8sid/sequence/8sid_L_VL.fa | sabdab_dataset/8sid/structure/8sid.pdb | sabdab_dataset/8sid/structure/chothia/8sid.pdb | false | false | train |
8sip | H | L | 0 | H | Hapten | NOS | INOSINE | IMMUNE SYSTEM | 02/07/24 | Structure of a mouse IgG antibody fragment that binds Inosine, an RNA modification | Mus musculus | mus musculus | mus musculus | mus musculus | Aoki, S.T. | 1.94 | X-RAY DIFFRACTION | 0.245 | 0.204 | false | true | IGHV9 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/8sip/abangle/8sip.abangle | sabdab_dataset/8sip/annotation/8sip_H_VH.ann | sabdab_dataset/8sip/annotation/8sip_L_VL.ann | sabdab_dataset/8sip/imgt/8sip_H_H.ann | sabdab_dataset/8sip/imgt/8sip_L_L.ann | sabdab_dataset/8sip/sequence/8sip_raw.pdb | sabdab_dataset/8sip/sequence/8sip_H_VH.fa | sabdab_dataset/8sip/sequence/8sip_L_VL.fa | sabdab_dataset/8sip/structure/8sip.pdb | sabdab_dataset/8sip/structure/chothia/8sip.pdb | true | false | train |
8siq | H | L | 0 | A | protein | null | spike protein s1 | IMMUNE SYSTEM | 03/13/24 | Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibodies CC25.36 and CV38-142 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, H., Wilson, I.A. | 2.5 | X-RAY DIFFRACTION | 0.287 | 0.247 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8siq/abangle/8siq.abangle | sabdab_dataset/8siq/annotation/8siq_H_VH.ann | sabdab_dataset/8siq/annotation/8siq_L_VL.ann | sabdab_dataset/8siq/imgt/8siq_H_H.ann | sabdab_dataset/8siq/imgt/8siq_L_L.ann | sabdab_dataset/8siq/sequence/8siq_raw.pdb | sabdab_dataset/8siq/sequence/8siq_H_VH.fa | sabdab_dataset/8siq/sequence/8siq_L_VL.fa | sabdab_dataset/8siq/structure/8siq.pdb | sabdab_dataset/8siq/structure/chothia/8siq.pdb | true | false | train |
8siq | M | N | 0 | A | protein | null | spike protein s1 | IMMUNE SYSTEM | 03/13/24 | Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibodies CC25.36 and CV38-142 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, H., Wilson, I.A. | 2.5 | X-RAY DIFFRACTION | 0.287 | 0.247 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8siq/abangle/8siq.abangle | sabdab_dataset/8siq/annotation/8siq_M_VH.ann | sabdab_dataset/8siq/annotation/8siq_N_VL.ann | sabdab_dataset/8siq/imgt/8siq_M_H.ann | sabdab_dataset/8siq/imgt/8siq_N_L.ann | sabdab_dataset/8siq/sequence/8siq_raw.pdb | sabdab_dataset/8siq/sequence/8siq_M_VH.fa | sabdab_dataset/8siq/sequence/8siq_N_VL.fa | sabdab_dataset/8siq/structure/8siq.pdb | sabdab_dataset/8siq/structure/chothia/8siq.pdb | true | false | train |
8sir | H | L | 0 | A | protein | null | spike protein s1 | IMMUNE SYSTEM | 03/13/24 | Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibody CC25.54 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, H., Wilson, I.A. | 3.3 | X-RAY DIFFRACTION | 0.236 | 0.208 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8sir/abangle/8sir.abangle | sabdab_dataset/8sir/annotation/8sir_H_VH.ann | sabdab_dataset/8sir/annotation/8sir_L_VL.ann | sabdab_dataset/8sir/imgt/8sir_H_H.ann | sabdab_dataset/8sir/imgt/8sir_L_L.ann | sabdab_dataset/8sir/sequence/8sir_raw.pdb | sabdab_dataset/8sir/sequence/8sir_H_VH.fa | sabdab_dataset/8sir/sequence/8sir_L_VL.fa | sabdab_dataset/8sir/structure/8sir.pdb | sabdab_dataset/8sir/structure/chothia/8sir.pdb | true | false | test |
8sis | H | L | 0 | A | protein | null | spike protein s1 | IMMUNE SYSTEM | 03/13/24 | Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibody CC84.2 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, H., Wilson, I.A. | 3.08 | X-RAY DIFFRACTION | 0.303 | 0.256 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8sis/abangle/8sis.abangle | sabdab_dataset/8sis/annotation/8sis_H_VH.ann | sabdab_dataset/8sis/annotation/8sis_L_VL.ann | sabdab_dataset/8sis/imgt/8sis_H_H.ann | sabdab_dataset/8sis/imgt/8sis_L_L.ann | sabdab_dataset/8sis/sequence/8sis_raw.pdb | sabdab_dataset/8sis/sequence/8sis_H_VH.fa | sabdab_dataset/8sis/sequence/8sis_L_VL.fa | sabdab_dataset/8sis/structure/8sis.pdb | sabdab_dataset/8sis/structure/chothia/8sis.pdb | true | false | train |
8sit | H | L | 0 | A | protein | null | spike protein s1 | IMMUNE SYSTEM | 03/13/24 | Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibody CC84.24 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, H., Wilson, I.A. | 2.91 | X-RAY DIFFRACTION | 0.309 | 0.261 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8sit/abangle/8sit.abangle | sabdab_dataset/8sit/annotation/8sit_H_VH.ann | sabdab_dataset/8sit/annotation/8sit_L_VL.ann | sabdab_dataset/8sit/imgt/8sit_H_H.ann | sabdab_dataset/8sit/imgt/8sit_L_L.ann | sabdab_dataset/8sit/sequence/8sit_raw.pdb | sabdab_dataset/8sit/sequence/8sit_H_VH.fa | sabdab_dataset/8sit/sequence/8sit_L_VL.fa | sabdab_dataset/8sit/structure/8sit.pdb | sabdab_dataset/8sit/structure/chothia/8sit.pdb | true | false | train |
8sit | M | N | 0 | B | protein | null | spike protein s1 | IMMUNE SYSTEM | 03/13/24 | Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibody CC84.24 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, H., Wilson, I.A. | 2.91 | X-RAY DIFFRACTION | 0.309 | 0.261 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8sit/abangle/8sit.abangle | sabdab_dataset/8sit/annotation/8sit_M_VH.ann | sabdab_dataset/8sit/annotation/8sit_N_VL.ann | sabdab_dataset/8sit/imgt/8sit_M_H.ann | sabdab_dataset/8sit/imgt/8sit_N_L.ann | sabdab_dataset/8sit/sequence/8sit_raw.pdb | sabdab_dataset/8sit/sequence/8sit_M_VH.fa | sabdab_dataset/8sit/sequence/8sit_N_VL.fa | sabdab_dataset/8sit/structure/8sit.pdb | sabdab_dataset/8sit/structure/chothia/8sit.pdb | true | false | train |
8sit | O | P | 0 | C | protein | null | spike protein s1 | IMMUNE SYSTEM | 03/13/24 | Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibody CC84.24 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, H., Wilson, I.A. | 2.91 | X-RAY DIFFRACTION | 0.309 | 0.261 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8sit/abangle/8sit.abangle | sabdab_dataset/8sit/annotation/8sit_O_VH.ann | sabdab_dataset/8sit/annotation/8sit_P_VL.ann | sabdab_dataset/8sit/imgt/8sit_O_H.ann | sabdab_dataset/8sit/imgt/8sit_P_L.ann | sabdab_dataset/8sit/sequence/8sit_raw.pdb | sabdab_dataset/8sit/sequence/8sit_O_VH.fa | sabdab_dataset/8sit/sequence/8sit_P_VL.fa | sabdab_dataset/8sit/structure/8sit.pdb | sabdab_dataset/8sit/structure/chothia/8sit.pdb | true | false | train |
8sit | Q | S | 0 | D | protein | null | spike protein s1 | IMMUNE SYSTEM | 03/13/24 | Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibody CC84.24 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, H., Wilson, I.A. | 2.91 | X-RAY DIFFRACTION | 0.309 | 0.261 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8sit/abangle/8sit.abangle | sabdab_dataset/8sit/annotation/8sit_Q_VH.ann | sabdab_dataset/8sit/annotation/8sit_S_VL.ann | sabdab_dataset/8sit/imgt/8sit_Q_H.ann | sabdab_dataset/8sit/imgt/8sit_S_L.ann | sabdab_dataset/8sit/sequence/8sit_raw.pdb | sabdab_dataset/8sit/sequence/8sit_Q_VH.fa | sabdab_dataset/8sit/sequence/8sit_S_VL.fa | sabdab_dataset/8sit/structure/8sit.pdb | sabdab_dataset/8sit/structure/chothia/8sit.pdb | true | false | test |
8sj4 | F | D | 0 | A | protein | null | conglutin | IMMUNE SYSTEM | 12/25/24 | 8F3-1H9-Ara h 6 | Arachis hypogaea; Homo sapiens | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 2.67 | X-RAY DIFFRACTION | 0.232 | 0.19 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8sj4/abangle/8sj4.abangle | sabdab_dataset/8sj4/annotation/8sj4_F_VH.ann | sabdab_dataset/8sj4/annotation/8sj4_D_VL.ann | sabdab_dataset/8sj4/imgt/8sj4_F_H.ann | sabdab_dataset/8sj4/imgt/8sj4_D_L.ann | sabdab_dataset/8sj4/sequence/8sj4_raw.pdb | sabdab_dataset/8sj4/sequence/8sj4_F_VH.fa | sabdab_dataset/8sj4/sequence/8sj4_D_VL.fa | sabdab_dataset/8sj4/structure/8sj4.pdb | sabdab_dataset/8sj4/structure/chothia/8sj4.pdb | true | false | train |
8sj4 | H | L | 0 | A | protein | null | conglutin | IMMUNE SYSTEM | 12/25/24 | 8F3-1H9-Ara h 6 | Arachis hypogaea; Homo sapiens | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 2.67 | X-RAY DIFFRACTION | 0.232 | 0.19 | false | true | IGHV7 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8sj4/abangle/8sj4.abangle | sabdab_dataset/8sj4/annotation/8sj4_H_VH.ann | sabdab_dataset/8sj4/annotation/8sj4_L_VL.ann | sabdab_dataset/8sj4/imgt/8sj4_H_H.ann | sabdab_dataset/8sj4/imgt/8sj4_L_L.ann | sabdab_dataset/8sj4/sequence/8sj4_raw.pdb | sabdab_dataset/8sj4/sequence/8sj4_H_VH.fa | sabdab_dataset/8sj4/sequence/8sj4_L_VL.fa | sabdab_dataset/8sj4/structure/8sj4.pdb | sabdab_dataset/8sj4/structure/chothia/8sj4.pdb | true | false | train |
8sj6 | A | B | 0 | Q | protein | null | ara h 2 allergen | IMMUNE SYSTEM | 12/25/24 | Ara h 2.01 38B7 8F3 | Arachis hypogaea; Homo sapiens | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 3.97 | X-RAY DIFFRACTION | 0.302 | 0.252 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8sj6/abangle/8sj6.abangle | sabdab_dataset/8sj6/annotation/8sj6_A_VH.ann | sabdab_dataset/8sj6/annotation/8sj6_B_VL.ann | sabdab_dataset/8sj6/imgt/8sj6_A_H.ann | sabdab_dataset/8sj6/imgt/8sj6_B_L.ann | sabdab_dataset/8sj6/sequence/8sj6_raw.pdb | sabdab_dataset/8sj6/sequence/8sj6_A_VH.fa | sabdab_dataset/8sj6/sequence/8sj6_B_VL.fa | sabdab_dataset/8sj6/structure/8sj6.pdb | sabdab_dataset/8sj6/structure/chothia/8sj6.pdb | false | false | validation |
8sj6 | C | D | 0 | Q | protein | null | ara h 2 allergen | IMMUNE SYSTEM | 12/25/24 | Ara h 2.01 38B7 8F3 | Arachis hypogaea; Homo sapiens | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 3.97 | X-RAY DIFFRACTION | 0.302 | 0.252 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8sj6/abangle/8sj6.abangle | sabdab_dataset/8sj6/annotation/8sj6_C_VH.ann | sabdab_dataset/8sj6/annotation/8sj6_D_VL.ann | sabdab_dataset/8sj6/imgt/8sj6_C_H.ann | sabdab_dataset/8sj6/imgt/8sj6_D_L.ann | sabdab_dataset/8sj6/sequence/8sj6_raw.pdb | sabdab_dataset/8sj6/sequence/8sj6_C_VH.fa | sabdab_dataset/8sj6/sequence/8sj6_D_VL.fa | sabdab_dataset/8sj6/structure/8sj6.pdb | sabdab_dataset/8sj6/structure/chothia/8sj6.pdb | false | false | train |
8sja | B | A | 0 | I | protein | null | conglutin | IMMUNE SYSTEM | 12/25/24 | Ara H 6 13D9 16A8 | Arachis hypogaea; Homo sapiens | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 2.68 | X-RAY DIFFRACTION | 0.239 | 0.194 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8sja/abangle/8sja.abangle | sabdab_dataset/8sja/annotation/8sja_B_VH.ann | sabdab_dataset/8sja/annotation/8sja_A_VL.ann | sabdab_dataset/8sja/imgt/8sja_B_H.ann | sabdab_dataset/8sja/imgt/8sja_A_L.ann | sabdab_dataset/8sja/sequence/8sja_raw.pdb | sabdab_dataset/8sja/sequence/8sja_B_VH.fa | sabdab_dataset/8sja/sequence/8sja_A_VL.fa | sabdab_dataset/8sja/structure/8sja.pdb | sabdab_dataset/8sja/structure/chothia/8sja.pdb | true | false | validation |
8sja | D | C | 0 | G | protein | null | conglutin | IMMUNE SYSTEM | 12/25/24 | Ara H 6 13D9 16A8 | Arachis hypogaea; Homo sapiens | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 2.68 | X-RAY DIFFRACTION | 0.239 | 0.194 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8sja/abangle/8sja.abangle | sabdab_dataset/8sja/annotation/8sja_D_VH.ann | sabdab_dataset/8sja/annotation/8sja_C_VL.ann | sabdab_dataset/8sja/imgt/8sja_D_H.ann | sabdab_dataset/8sja/imgt/8sja_C_L.ann | sabdab_dataset/8sja/sequence/8sja_raw.pdb | sabdab_dataset/8sja/sequence/8sja_D_VH.fa | sabdab_dataset/8sja/sequence/8sja_C_VL.fa | sabdab_dataset/8sja/structure/8sja.pdb | sabdab_dataset/8sja/structure/chothia/8sja.pdb | true | false | train |
8sja | F | E | 0 | I | protein | null | conglutin | IMMUNE SYSTEM | 12/25/24 | Ara H 6 13D9 16A8 | Arachis hypogaea; Homo sapiens | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 2.68 | X-RAY DIFFRACTION | 0.239 | 0.194 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8sja/abangle/8sja.abangle | sabdab_dataset/8sja/annotation/8sja_F_VH.ann | sabdab_dataset/8sja/annotation/8sja_E_VL.ann | sabdab_dataset/8sja/imgt/8sja_F_H.ann | sabdab_dataset/8sja/imgt/8sja_E_L.ann | sabdab_dataset/8sja/sequence/8sja_raw.pdb | sabdab_dataset/8sja/sequence/8sja_F_VH.fa | sabdab_dataset/8sja/sequence/8sja_E_VL.fa | sabdab_dataset/8sja/structure/8sja.pdb | sabdab_dataset/8sja/structure/chothia/8sja.pdb | true | false | train |
8sja | H | L | 0 | G | protein | null | conglutin | IMMUNE SYSTEM | 12/25/24 | Ara H 6 13D9 16A8 | Arachis hypogaea; Homo sapiens | homo sapiens | homo sapiens | arachis hypogaea | Spiller, B.W., Shrem, R.A. | 2.68 | X-RAY DIFFRACTION | 0.239 | 0.194 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8sja/abangle/8sja.abangle | sabdab_dataset/8sja/annotation/8sja_H_VH.ann | sabdab_dataset/8sja/annotation/8sja_L_VL.ann | sabdab_dataset/8sja/imgt/8sja_H_H.ann | sabdab_dataset/8sja/imgt/8sja_L_L.ann | sabdab_dataset/8sja/sequence/8sja_raw.pdb | sabdab_dataset/8sja/sequence/8sja_H_VH.fa | sabdab_dataset/8sja/sequence/8sja_L_VL.fa | sabdab_dataset/8sja/structure/8sja.pdb | sabdab_dataset/8sja/structure/chothia/8sja.pdb | true | false | train |
8sjk | B | A | 0 | A | Hapten | CFF | CAFFEINE | IMMUNE SYSTEM | 04/24/24 | Pembrolizumab Caffeine crystal | Homo sapiens | homo sapiens | homo sapiens | homo sapiens | Larpent, P., Codan, L., Bothe, J.R., Stueber, D., Reichert, P., Fischmann, T., Su, Y., Pabit, S., Gupta, S., Iuzzolino, L., Cote, A. | 2.22 | X-RAY DIFFRACTION | 0.238 | 0.186 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8sjk/abangle/8sjk.abangle | sabdab_dataset/8sjk/annotation/8sjk_B_VH.ann | sabdab_dataset/8sjk/annotation/8sjk_A_VL.ann | sabdab_dataset/8sjk/imgt/8sjk_B_H.ann | sabdab_dataset/8sjk/imgt/8sjk_A_L.ann | sabdab_dataset/8sjk/sequence/8sjk_raw.pdb | sabdab_dataset/8sjk/sequence/8sjk_B_VH.fa | sabdab_dataset/8sjk/sequence/8sjk_A_VL.fa | sabdab_dataset/8sjk/structure/8sjk.pdb | sabdab_dataset/8sjk/structure/chothia/8sjk.pdb | true | false | train |
8sk5 | B | null | 0 | A | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 08/16/23 | Crystal structure of the SARS-CoV-2 neutralizing VHH 7A9 bound to the spike receptor binding domain | Lama glama; Severe acute respiratory syndrome coronavirus 2 | lama glama | null | severe acute respiratory syndrome coronavirus2 | Noland, C.L., Pande, K., Zhang, L., Zhou, H., Galli, J., Eddins, M., Gomez-Llorente, Y. | 2.011 | X-RAY DIFFRACTION | 0.211 | 0.183 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sk5/annotation/8sk5_B_VH.ann | null | sabdab_dataset/8sk5/imgt/8sk5_B_H.ann | null | sabdab_dataset/8sk5/sequence/8sk5_raw.pdb | sabdab_dataset/8sk5/sequence/8sk5_B_VH.fa | null | sabdab_dataset/8sk5/structure/8sk5.pdb | sabdab_dataset/8sk5/structure/chothia/8sk5.pdb | true | true | train |
8skj | A | null | 0 | E | peptide | null | v5 epitope tag peptide | BIOSYNTHETIC PROTEIN | 11/22/23 | Crystal structure of a Nanobody bound to the V5 peptide. | Camelidae; SYNTHETIC CONSTRUCT | camelidae | null | simian virus 12 | Zaghal, M., Matte, K., Venes, A., Patel, S., Laroche, G., Sarvan, S., Joshi, M., Couture, J.F., Giguere, P.M. | 2.01 | X-RAY DIFFRACTION | 0.236 | 0.189 | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8skj/annotation/8skj_A_VH.ann | null | sabdab_dataset/8skj/imgt/8skj_A_H.ann | null | sabdab_dataset/8skj/sequence/8skj_raw.pdb | sabdab_dataset/8skj/sequence/8skj_A_VH.fa | null | sabdab_dataset/8skj/structure/8skj.pdb | sabdab_dataset/8skj/structure/chothia/8skj.pdb | true | true | validation |
8skj | B | null | 0 | C | peptide | null | v5 epitope tag peptide | BIOSYNTHETIC PROTEIN | 11/22/23 | Crystal structure of a Nanobody bound to the V5 peptide. | Camelidae; SYNTHETIC CONSTRUCT | camelidae | null | simian virus 12 | Zaghal, M., Matte, K., Venes, A., Patel, S., Laroche, G., Sarvan, S., Joshi, M., Couture, J.F., Giguere, P.M. | 2.01 | X-RAY DIFFRACTION | 0.236 | 0.189 | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8skj/annotation/8skj_B_VH.ann | null | sabdab_dataset/8skj/imgt/8skj_B_H.ann | null | sabdab_dataset/8skj/sequence/8skj_raw.pdb | sabdab_dataset/8skj/sequence/8skj_B_VH.fa | null | sabdab_dataset/8skj/structure/8skj.pdb | sabdab_dataset/8skj/structure/chothia/8skj.pdb | true | false | train |
8skj | D | null | 0 | F | peptide | null | v5 epitope tag peptide | BIOSYNTHETIC PROTEIN | 11/22/23 | Crystal structure of a Nanobody bound to the V5 peptide. | Camelidae; SYNTHETIC CONSTRUCT | camelidae | null | simian virus 12 | Zaghal, M., Matte, K., Venes, A., Patel, S., Laroche, G., Sarvan, S., Joshi, M., Couture, J.F., Giguere, P.M. | 2.01 | X-RAY DIFFRACTION | 0.236 | 0.189 | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8skj/annotation/8skj_D_VH.ann | null | sabdab_dataset/8skj/imgt/8skj_D_H.ann | null | sabdab_dataset/8skj/sequence/8skj_raw.pdb | sabdab_dataset/8skj/sequence/8skj_D_VH.fa | null | sabdab_dataset/8skj/structure/8skj.pdb | sabdab_dataset/8skj/structure/chothia/8skj.pdb | true | false | test |
8skj | G | null | 0 | H | peptide | null | v5 epitope tag peptide | BIOSYNTHETIC PROTEIN | 11/22/23 | Crystal structure of a Nanobody bound to the V5 peptide. | Camelidae; SYNTHETIC CONSTRUCT | camelidae | null | simian virus 12 | Zaghal, M., Matte, K., Venes, A., Patel, S., Laroche, G., Sarvan, S., Joshi, M., Couture, J.F., Giguere, P.M. | 2.01 | X-RAY DIFFRACTION | 0.236 | 0.189 | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8skj/annotation/8skj_G_VH.ann | null | sabdab_dataset/8skj/imgt/8skj_G_H.ann | null | sabdab_dataset/8skj/sequence/8skj_raw.pdb | sabdab_dataset/8skj/sequence/8skj_G_VH.fa | null | sabdab_dataset/8skj/structure/8skj.pdb | sabdab_dataset/8skj/structure/chothia/8skj.pdb | true | false | validation |
8slb | H | L | 0 | A | protein | null | cobalt/magnesium transport protein cora | METAL TRANSPORT | 06/07/23 | X-ray structure of CorA N-terminal domain in complex with conformation-specific synthetic antibody C12 | Homo sapiens; Thermotoga maritima MSB8 | homo sapiens | homo sapiens | thermotoga maritima msb8 | Dominik, P.K., Erramilli, S.K., Reddy, B.G., Kossiakoff, A.A. | 2.04 | X-RAY DIFFRACTION | 0.218 | 0.166 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8slb/abangle/8slb.abangle | sabdab_dataset/8slb/annotation/8slb_H_VH.ann | sabdab_dataset/8slb/annotation/8slb_L_VL.ann | sabdab_dataset/8slb/imgt/8slb_H_H.ann | sabdab_dataset/8slb/imgt/8slb_L_L.ann | sabdab_dataset/8slb/sequence/8slb_raw.pdb | sabdab_dataset/8slb/sequence/8slb_H_VH.fa | sabdab_dataset/8slb/sequence/8slb_L_VL.fa | sabdab_dataset/8slb/structure/8slb.pdb | sabdab_dataset/8slb/structure/chothia/8slb.pdb | true | false | train |
8slc | C | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/22/24 | High Affinity nanobodies against GFP | Aequorea victoria; Lama glama | lama glama | null | null | Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C. | 2.97 | X-RAY DIFFRACTION | 0.241 | 0.22 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8slc/annotation/8slc_C_VH.ann | null | sabdab_dataset/8slc/imgt/8slc_C_H.ann | null | sabdab_dataset/8slc/sequence/8slc_raw.pdb | sabdab_dataset/8slc/sequence/8slc_C_VH.fa | null | sabdab_dataset/8slc/structure/8slc.pdb | sabdab_dataset/8slc/structure/chothia/8slc.pdb | true | false | train |
8slc | D | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/22/24 | High Affinity nanobodies against GFP | Aequorea victoria; Lama glama | lama glama | null | null | Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C. | 2.97 | X-RAY DIFFRACTION | 0.241 | 0.22 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8slc/annotation/8slc_D_VH.ann | null | sabdab_dataset/8slc/imgt/8slc_D_H.ann | null | sabdab_dataset/8slc/sequence/8slc_raw.pdb | sabdab_dataset/8slc/sequence/8slc_D_VH.fa | null | sabdab_dataset/8slc/structure/8slc.pdb | sabdab_dataset/8slc/structure/chothia/8slc.pdb | true | false | test |
8sm1 | H | L | 0 | G | protein | null | envelope glycoprotein gp350 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/01/24 | CRYSTAL STRUCTURE OF HUMAN ANTIBODY 769A9 IN COMPLEX WITH EPSTEIN-BARR VIRUS MAJOR GLYCOPROTEIN GP350 | Homo sapiens; Human herpesvirus 4 | homo sapiens | homo sapiens | human herpesvirus 4 | Chen, W.-H., Bu, W., Cohen, J.I., Kanekiyo, M., Joyce, M.G. | 3.29 | X-RAY DIFFRACTION | 0.298 | 0.258 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8sm1/abangle/8sm1.abangle | sabdab_dataset/8sm1/annotation/8sm1_H_VH.ann | sabdab_dataset/8sm1/annotation/8sm1_L_VL.ann | sabdab_dataset/8sm1/imgt/8sm1_H_H.ann | sabdab_dataset/8sm1/imgt/8sm1_L_L.ann | sabdab_dataset/8sm1/sequence/8sm1_raw.pdb | sabdab_dataset/8sm1/sequence/8sm1_H_VH.fa | sabdab_dataset/8sm1/sequence/8sm1_L_VL.fa | sabdab_dataset/8sm1/structure/8sm1.pdb | sabdab_dataset/8sm1/structure/chothia/8sm1.pdb | true | false | validation |
8smi | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/13/23 | Crystal structure of antibody WRAIR-2123 in complex with SARS-CoV-2 receptor binding domain | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sankhala, R.S., Jensen, J.L., Joyce, M.G. | 3.5 | X-RAY DIFFRACTION | 0.295 | 0.242 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8smi/abangle/8smi.abangle | sabdab_dataset/8smi/annotation/8smi_H_VH.ann | sabdab_dataset/8smi/annotation/8smi_L_VL.ann | sabdab_dataset/8smi/imgt/8smi_H_H.ann | sabdab_dataset/8smi/imgt/8smi_L_L.ann | sabdab_dataset/8smi/sequence/8smi_raw.pdb | sabdab_dataset/8smi/sequence/8smi_H_VH.fa | sabdab_dataset/8smi/sequence/8smi_L_VL.fa | sabdab_dataset/8smi/structure/8smi.pdb | sabdab_dataset/8smi/structure/chothia/8smi.pdb | false | false | train |
8smk | B | C | 0 | A | protein | null | protein-arginine deiminase type-4 | IMMUNE SYSTEM | 03/06/24 | hPAD4 bound to Activating Fab hA362 | Homo sapiens | homo sapiens | homo sapiens | homo sapiens | Maker, A., Verba, K.A. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8smk/abangle/8smk.abangle | sabdab_dataset/8smk/annotation/8smk_B_VH.ann | sabdab_dataset/8smk/annotation/8smk_C_VL.ann | sabdab_dataset/8smk/imgt/8smk_B_H.ann | sabdab_dataset/8smk/imgt/8smk_C_L.ann | sabdab_dataset/8smk/sequence/8smk_raw.pdb | sabdab_dataset/8smk/sequence/8smk_B_VH.fa | sabdab_dataset/8smk/sequence/8smk_C_VL.fa | sabdab_dataset/8smk/structure/8smk.pdb | sabdab_dataset/8smk/structure/chothia/8smk.pdb | false | false | validation |
8smk | E | F | 0 | D | protein | null | protein-arginine deiminase type-4 | IMMUNE SYSTEM | 03/06/24 | hPAD4 bound to Activating Fab hA362 | Homo sapiens | homo sapiens | homo sapiens | homo sapiens | Maker, A., Verba, K.A. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8smk/abangle/8smk.abangle | sabdab_dataset/8smk/annotation/8smk_E_VH.ann | sabdab_dataset/8smk/annotation/8smk_F_VL.ann | sabdab_dataset/8smk/imgt/8smk_E_H.ann | sabdab_dataset/8smk/imgt/8smk_F_L.ann | sabdab_dataset/8smk/sequence/8smk_raw.pdb | sabdab_dataset/8smk/sequence/8smk_E_VH.fa | sabdab_dataset/8smk/sequence/8smk_F_VL.fa | sabdab_dataset/8smk/structure/8smk.pdb | sabdab_dataset/8smk/structure/chothia/8smk.pdb | false | false | train |
8sml | C | B | 0 | A | protein | null | protein-arginine deiminase type-4 | HYDROLASE/IMMUNE SYSTEM | 03/06/24 | hPAD4 bound to inhibitory Fab hI365 | Homo sapiens | homo sapiens | homo sapiens | homo sapiens | Maker, A., Verba, K.A. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8sml/abangle/8sml.abangle | sabdab_dataset/8sml/annotation/8sml_C_VH.ann | sabdab_dataset/8sml/annotation/8sml_B_VL.ann | sabdab_dataset/8sml/imgt/8sml_C_H.ann | sabdab_dataset/8sml/imgt/8sml_B_L.ann | sabdab_dataset/8sml/sequence/8sml_raw.pdb | sabdab_dataset/8sml/sequence/8sml_C_VH.fa | sabdab_dataset/8sml/sequence/8sml_B_VL.fa | sabdab_dataset/8sml/structure/8sml.pdb | sabdab_dataset/8sml/structure/chothia/8sml.pdb | false | false | train |
8sml | F | E | 0 | D | protein | null | protein-arginine deiminase type-4 | HYDROLASE/IMMUNE SYSTEM | 03/06/24 | hPAD4 bound to inhibitory Fab hI365 | Homo sapiens | homo sapiens | homo sapiens | homo sapiens | Maker, A., Verba, K.A. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8sml/abangle/8sml.abangle | sabdab_dataset/8sml/annotation/8sml_F_VH.ann | sabdab_dataset/8sml/annotation/8sml_E_VL.ann | sabdab_dataset/8sml/imgt/8sml_F_H.ann | sabdab_dataset/8sml/imgt/8sml_E_L.ann | sabdab_dataset/8sml/sequence/8sml_raw.pdb | sabdab_dataset/8sml/sequence/8sml_F_VH.fa | sabdab_dataset/8sml/sequence/8sml_E_VL.fa | sabdab_dataset/8sml/structure/8sml.pdb | sabdab_dataset/8sml/structure/chothia/8sml.pdb | false | false | train |
8smm | H | L | 0 | A | protein | null | hyaluronan synthase 1 | Transferase/Immune System | 05/01/24 | Xenopus laevis hyaluronan synthase 1 | Homo sapiens; Xenopus laevis | homo sapiens | homo sapiens | xenopus laevis | Gorniak, I., Zimmer, J. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8smm/abangle/8smm.abangle | sabdab_dataset/8smm/annotation/8smm_H_VH.ann | sabdab_dataset/8smm/annotation/8smm_L_VL.ann | sabdab_dataset/8smm/imgt/8smm_H_H.ann | sabdab_dataset/8smm/imgt/8smm_L_L.ann | sabdab_dataset/8smm/sequence/8smm_raw.pdb | sabdab_dataset/8smm/sequence/8smm_H_VH.fa | sabdab_dataset/8smm/sequence/8smm_L_VL.fa | sabdab_dataset/8smm/structure/8smm.pdb | sabdab_dataset/8smm/structure/chothia/8smm.pdb | false | false | train |
8smn | H | L | 0 | A | protein | null | hyaluronan synthase 1 | Transferase/Immune System | 05/01/24 | Xenopus laevis hyaluronan synthase 1, nascent HA polymer bound state | Homo sapiens; Xenopus laevis | homo sapiens | homo sapiens | xenopus laevis | Gorniak, I., Zimmer, J. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8smn/abangle/8smn.abangle | sabdab_dataset/8smn/annotation/8smn_H_VH.ann | sabdab_dataset/8smn/annotation/8smn_L_VL.ann | sabdab_dataset/8smn/imgt/8smn_H_H.ann | sabdab_dataset/8smn/imgt/8smn_L_L.ann | sabdab_dataset/8smn/sequence/8smn_raw.pdb | sabdab_dataset/8smn/sequence/8smn_H_VH.fa | sabdab_dataset/8smn/sequence/8smn_L_VL.fa | sabdab_dataset/8smn/structure/8smn.pdb | sabdab_dataset/8smn/structure/chothia/8smn.pdb | false | false | validation |
8smp | H | L | 0 | A | protein | null | hyaluronan synthase 1 | Transferase/Immune System | 05/01/24 | Xenopus laevis hyaluronan synthase 1, UDP-bound, gating loop inserted state | Homo sapiens; Xenopus laevis | homo sapiens | homo sapiens | xenopus laevis | Gorniak, I., Zimmer, J. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8smp/abangle/8smp.abangle | sabdab_dataset/8smp/annotation/8smp_H_VH.ann | sabdab_dataset/8smp/annotation/8smp_L_VL.ann | sabdab_dataset/8smp/imgt/8smp_H_H.ann | sabdab_dataset/8smp/imgt/8smp_L_L.ann | sabdab_dataset/8smp/sequence/8smp_raw.pdb | sabdab_dataset/8smp/sequence/8smp_H_VH.fa | sabdab_dataset/8smp/sequence/8smp_L_VL.fa | sabdab_dataset/8smp/structure/8smp.pdb | sabdab_dataset/8smp/structure/chothia/8smp.pdb | false | false | train |
8smt | A | B | 0 | C | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/28/23 | Crystal structure of antibody WRAIR-2134 in complex with SARS-CoV-2 receptor binding domain | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sankhala, R.S., Jensen, J.L., Joyce, M.G. | 3.16 | X-RAY DIFFRACTION | 0.249 | 0.214 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8smt/abangle/8smt.abangle | sabdab_dataset/8smt/annotation/8smt_A_VH.ann | sabdab_dataset/8smt/annotation/8smt_B_VL.ann | sabdab_dataset/8smt/imgt/8smt_A_H.ann | sabdab_dataset/8smt/imgt/8smt_B_L.ann | sabdab_dataset/8smt/sequence/8smt_raw.pdb | sabdab_dataset/8smt/sequence/8smt_A_VH.fa | sabdab_dataset/8smt/sequence/8smt_B_VL.fa | sabdab_dataset/8smt/structure/8smt.pdb | sabdab_dataset/8smt/structure/chothia/8smt.pdb | false | false | train |
8smt | D | F | 0 | G | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/28/23 | Crystal structure of antibody WRAIR-2134 in complex with SARS-CoV-2 receptor binding domain | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sankhala, R.S., Jensen, J.L., Joyce, M.G. | 3.16 | X-RAY DIFFRACTION | 0.249 | 0.214 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8smt/abangle/8smt.abangle | sabdab_dataset/8smt/annotation/8smt_D_VH.ann | sabdab_dataset/8smt/annotation/8smt_F_VL.ann | sabdab_dataset/8smt/imgt/8smt_D_H.ann | sabdab_dataset/8smt/imgt/8smt_F_L.ann | sabdab_dataset/8smt/sequence/8smt_raw.pdb | sabdab_dataset/8smt/sequence/8smt_D_VH.fa | sabdab_dataset/8smt/sequence/8smt_F_VL.fa | sabdab_dataset/8smt/structure/8smt.pdb | sabdab_dataset/8smt/structure/chothia/8smt.pdb | false | false | train |
8smt | H | L | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/28/23 | Crystal structure of antibody WRAIR-2134 in complex with SARS-CoV-2 receptor binding domain | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sankhala, R.S., Jensen, J.L., Joyce, M.G. | 3.16 | X-RAY DIFFRACTION | 0.249 | 0.214 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8smt/abangle/8smt.abangle | sabdab_dataset/8smt/annotation/8smt_H_VH.ann | sabdab_dataset/8smt/annotation/8smt_L_VL.ann | sabdab_dataset/8smt/imgt/8smt_H_H.ann | sabdab_dataset/8smt/imgt/8smt_L_L.ann | sabdab_dataset/8smt/sequence/8smt_raw.pdb | sabdab_dataset/8smt/sequence/8smt_H_VH.fa | sabdab_dataset/8smt/sequence/8smt_L_VL.fa | sabdab_dataset/8smt/structure/8smt.pdb | sabdab_dataset/8smt/structure/chothia/8smt.pdb | false | false | validation |
8smt | I | J | 0 | K | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/28/23 | Crystal structure of antibody WRAIR-2134 in complex with SARS-CoV-2 receptor binding domain | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sankhala, R.S., Jensen, J.L., Joyce, M.G. | 3.16 | X-RAY DIFFRACTION | 0.249 | 0.214 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8smt/abangle/8smt.abangle | sabdab_dataset/8smt/annotation/8smt_I_VH.ann | sabdab_dataset/8smt/annotation/8smt_J_VL.ann | sabdab_dataset/8smt/imgt/8smt_I_H.ann | sabdab_dataset/8smt/imgt/8smt_J_L.ann | sabdab_dataset/8smt/sequence/8smt_raw.pdb | sabdab_dataset/8smt/sequence/8smt_I_VH.fa | sabdab_dataset/8smt/sequence/8smt_J_VL.fa | sabdab_dataset/8smt/structure/8smt.pdb | sabdab_dataset/8smt/structure/chothia/8smt.pdb | false | false | train |
8smv | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 02/21/24 | GPR161 Gs heterotrimer | Homo sapiens; Lama glama | lama glama | null | homo sapiens | homo sapiens | Hoppe, N., Manglik, A., Harrison, S. | 2.74 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8smv/annotation/8smv_N_VH.ann | null | sabdab_dataset/8smv/imgt/8smv_N_H.ann | null | sabdab_dataset/8smv/sequence/8smv_raw.pdb | sabdab_dataset/8smv/sequence/8smv_N_VH.fa | null | sabdab_dataset/8smv/structure/8smv.pdb | sabdab_dataset/8smv/structure/chothia/8smv.pdb | false | false | train |
8snc | B | null | 0 | A | protein | null | hyaluronan synthase | TRANSFERASE | 05/01/24 | Chlorella virus Hyaluronan Synthase bound to GlcA extended GlcNAc primer | Lama glama; Paramecium bursaria Chlorella virus CZ-2 | lama glama | null | paramecium bursaria chlorella virus cz-2 | Stephens, Z., Zimmer, J. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8snc/annotation/8snc_B_VH.ann | null | sabdab_dataset/8snc/imgt/8snc_B_H.ann | null | sabdab_dataset/8snc/sequence/8snc_raw.pdb | sabdab_dataset/8snc/sequence/8snc_B_VH.fa | null | sabdab_dataset/8snc/structure/8snc.pdb | sabdab_dataset/8snc/structure/chothia/8snc.pdb | false | false | train |
8snc | C | null | 0 | A | protein | null | hyaluronan synthase | TRANSFERASE | 05/01/24 | Chlorella virus Hyaluronan Synthase bound to GlcA extended GlcNAc primer | Lama glama; Paramecium bursaria Chlorella virus CZ-2 | lama glama | null | paramecium bursaria chlorella virus cz-2 | Stephens, Z., Zimmer, J. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8snc/annotation/8snc_C_VH.ann | null | sabdab_dataset/8snc/imgt/8snc_C_H.ann | null | sabdab_dataset/8snc/sequence/8snc_raw.pdb | sabdab_dataset/8snc/sequence/8snc_C_VH.fa | null | sabdab_dataset/8snc/structure/8snc.pdb | sabdab_dataset/8snc/structure/chothia/8snc.pdb | false | false | train |
8snd | B | null | 0 | A | protein | null | hyaluronan synthase | TRANSFERASE | 05/01/24 | Chlorella virus Hyaluronan Synthase bound to GlcNAc primer and UDP-GlcA | Lama glama; Paramecium bursaria Chlorella virus CZ-2 | lama glama | null | paramecium bursaria chlorella virus cz-2 | Stephens, Z., Zimmer, J. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8snd/annotation/8snd_B_VH.ann | null | sabdab_dataset/8snd/imgt/8snd_B_H.ann | null | sabdab_dataset/8snd/sequence/8snd_raw.pdb | sabdab_dataset/8snd/sequence/8snd_B_VH.fa | null | sabdab_dataset/8snd/structure/8snd.pdb | sabdab_dataset/8snd/structure/chothia/8snd.pdb | false | false | train |
8snd | C | null | 0 | A | protein | null | hyaluronan synthase | TRANSFERASE | 05/01/24 | Chlorella virus Hyaluronan Synthase bound to GlcNAc primer and UDP-GlcA | Lama glama; Paramecium bursaria Chlorella virus CZ-2 | lama glama | null | paramecium bursaria chlorella virus cz-2 | Stephens, Z., Zimmer, J. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8snd/annotation/8snd_C_VH.ann | null | sabdab_dataset/8snd/imgt/8snd_C_H.ann | null | sabdab_dataset/8snd/sequence/8snd_raw.pdb | sabdab_dataset/8snd/sequence/8snd_C_VH.fa | null | sabdab_dataset/8snd/structure/8snd.pdb | sabdab_dataset/8snd/structure/chothia/8snd.pdb | false | false | train |
8sne | B | null | 0 | A | protein | null | hyaluronan synthase | TRANSFERASE | 05/01/24 | Chlorella virus Hyaluronan Synthase bound to GlcA extended GlcNAc primer and UDP | Lama glama; Paramecium bursaria Chlorella virus CZ-2 | lama glama | null | paramecium bursaria chlorella virus cz-2 | Stephens, Z., Zimmer, J. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sne/annotation/8sne_B_VH.ann | null | sabdab_dataset/8sne/imgt/8sne_B_H.ann | null | sabdab_dataset/8sne/sequence/8sne_raw.pdb | sabdab_dataset/8sne/sequence/8sne_B_VH.fa | null | sabdab_dataset/8sne/structure/8sne.pdb | sabdab_dataset/8sne/structure/chothia/8sne.pdb | false | false | train |
8sne | C | null | 0 | A | protein | null | hyaluronan synthase | TRANSFERASE | 05/01/24 | Chlorella virus Hyaluronan Synthase bound to GlcA extended GlcNAc primer and UDP | Lama glama; Paramecium bursaria Chlorella virus CZ-2 | lama glama | null | paramecium bursaria chlorella virus cz-2 | Stephens, Z., Zimmer, J. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sne/annotation/8sne_C_VH.ann | null | sabdab_dataset/8sne/imgt/8sne_C_H.ann | null | sabdab_dataset/8sne/sequence/8sne_raw.pdb | sabdab_dataset/8sne/sequence/8sne_C_VH.fa | null | sabdab_dataset/8sne/structure/8sne.pdb | sabdab_dataset/8sne/structure/chothia/8sne.pdb | false | false | validation |
8so3 | H | L | 0 | D | protein | null | lymphocyte activation gene 3 protein | IMMUNOSUPPRESSANT | 09/06/23 | CryoEM structure of a therapeutic antibody (favezelimab) bound to human LAG3 | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Mishra, A.K., Shahid, S., Karade, S.S., Mariuzza, R.A. | 3.61 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8so3/abangle/8so3.abangle | sabdab_dataset/8so3/annotation/8so3_H_VH.ann | sabdab_dataset/8so3/annotation/8so3_L_VL.ann | sabdab_dataset/8so3/imgt/8so3_H_H.ann | sabdab_dataset/8so3/imgt/8so3_L_L.ann | sabdab_dataset/8so3/sequence/8so3_raw.pdb | sabdab_dataset/8so3/sequence/8so3_H_VH.fa | sabdab_dataset/8so3/sequence/8so3_L_VL.fa | sabdab_dataset/8so3/structure/8so3.pdb | sabdab_dataset/8so3/structure/chothia/8so3.pdb | false | false | train |
8so3 | Y | Z | 0 | X | protein | null | lymphocyte activation gene 3 protein | IMMUNOSUPPRESSANT | 09/06/23 | CryoEM structure of a therapeutic antibody (favezelimab) bound to human LAG3 | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Mishra, A.K., Shahid, S., Karade, S.S., Mariuzza, R.A. | 3.61 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8so3/abangle/8so3.abangle | sabdab_dataset/8so3/annotation/8so3_Y_VH.ann | sabdab_dataset/8so3/annotation/8so3_Z_VL.ann | sabdab_dataset/8so3/imgt/8so3_Y_H.ann | sabdab_dataset/8so3/imgt/8so3_Z_L.ann | sabdab_dataset/8so3/sequence/8so3_raw.pdb | sabdab_dataset/8so3/sequence/8so3_Y_VH.fa | sabdab_dataset/8so3/sequence/8so3_Z_VL.fa | sabdab_dataset/8so3/structure/8so3.pdb | sabdab_dataset/8so3/structure/chothia/8so3.pdb | false | false | train |
8sos | D | null | 0 | A | protein | null | antigen-presenting glycoprotein cd1d | IMMUNE SYSTEM | 12/13/23 | Human CD1d presenting sphingomyelin C24:1 in complex with VHH nanobody 1D17 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Shahine, A., Rossjohn, J. | 2.33 | X-RAY DIFFRACTION | 0.230 | 0.209 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sos/annotation/8sos_D_VH.ann | null | sabdab_dataset/8sos/imgt/8sos_D_H.ann | null | sabdab_dataset/8sos/sequence/8sos_raw.pdb | sabdab_dataset/8sos/sequence/8sos_D_VH.fa | null | sabdab_dataset/8sos/structure/8sos.pdb | sabdab_dataset/8sos/structure/chothia/8sos.pdb | true | true | train |
8sos | G | null | 0 | E | protein | null | antigen-presenting glycoprotein cd1d | IMMUNE SYSTEM | 12/13/23 | Human CD1d presenting sphingomyelin C24:1 in complex with VHH nanobody 1D17 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Shahine, A., Rossjohn, J. | 2.33 | X-RAY DIFFRACTION | 0.230 | 0.209 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8sos/annotation/8sos_G_VH.ann | null | sabdab_dataset/8sos/imgt/8sos_G_H.ann | null | sabdab_dataset/8sos/sequence/8sos_raw.pdb | sabdab_dataset/8sos/sequence/8sos_G_VH.fa | null | sabdab_dataset/8sos/structure/8sos.pdb | sabdab_dataset/8sos/structure/chothia/8sos.pdb | true | false | train |
8sow | C | c | 0 | A | protein | null | interleukin-2 | CYTOKINE | 09/04/24 | Structure of the complex formed by human interleukin-2 and scFv F10 | Homo sapiens | homo sapiens | null | homo sapiens | Gould, J.R., Leonard, E.K., Cao, S.D., Spangler, J.B. | 1.71 | X-RAY DIFFRACTION | 0.235 | 0.216 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8sow/abangle/8sow.abangle | sabdab_dataset/8sow/annotation/8sow_C_VH.ann | sabdab_dataset/8sow/annotation/8sow_C_VL.ann | sabdab_dataset/8sow/imgt/8sow_C_H.ann | sabdab_dataset/8sow/imgt/8sow_C_L.ann | sabdab_dataset/8sow/sequence/8sow_raw.pdb | sabdab_dataset/8sow/sequence/8sow_C_VH.fa | sabdab_dataset/8sow/sequence/8sow_C_VL.fa | sabdab_dataset/8sow/structure/8sow.pdb | sabdab_dataset/8sow/structure/chothia/8sow.pdb | true | true | validation |
8soz | C | c | 0 | A | protein | null | interleukin-2 | CYTOKINE | 09/04/24 | Structure of the complex formed by human interleukin-2 and scFv 602 | Homo sapiens | homo sapiens | null | homo sapiens | Gould, J.R., Leonard, E.K., Cao, S.D., Spangler, J.B. | 1.64 | X-RAY DIFFRACTION | 0.250 | 0.219 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8soz/abangle/8soz.abangle | sabdab_dataset/8soz/annotation/8soz_C_VH.ann | sabdab_dataset/8soz/annotation/8soz_C_VL.ann | sabdab_dataset/8soz/imgt/8soz_C_H.ann | sabdab_dataset/8soz/imgt/8soz_C_L.ann | sabdab_dataset/8soz/sequence/8soz_raw.pdb | sabdab_dataset/8soz/sequence/8soz_C_VH.fa | sabdab_dataset/8soz/sequence/8soz_C_VL.fa | sabdab_dataset/8soz/structure/8soz.pdb | sabdab_dataset/8soz/structure/chothia/8soz.pdb | false | false | train |
8sps | K | k | 0 | G | E | L | H | F | protein | protein | protein | protein | protein | NA | NA | NA | NA | NA | histone h2a type 2-c | histone h3.1 | maltodextrin-binding protein,pou domain, class 5,transcription factor 1 | histone h2b type 2-e | histone h4 | TRANSCRIPTION/DNA | 06/28/23 | High resolution structure of ESRRB nucleosome bound OCT4 at site a and site b | Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT | null | null | homo sapiens | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Lian, T., Guan, R., Bai, Y. | 3.0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8sps/abangle/8sps.abangle | sabdab_dataset/8sps/annotation/8sps_K_VH.ann | sabdab_dataset/8sps/annotation/8sps_K_VL.ann | sabdab_dataset/8sps/imgt/8sps_K_H.ann | sabdab_dataset/8sps/imgt/8sps_K_L.ann | sabdab_dataset/8sps/sequence/8sps_raw.pdb | sabdab_dataset/8sps/sequence/8sps_K_VH.fa | sabdab_dataset/8sps/sequence/8sps_K_VL.fa | sabdab_dataset/8sps/structure/8sps.pdb | sabdab_dataset/8sps/structure/chothia/8sps.pdb | false | false | validation |
8sps | N | n | 0 | C | B | D | protein | protein | protein | NA | NA | NA | histone h2a type 2-c | histone h4 | histone h2b type 2-e | TRANSCRIPTION/DNA | 06/28/23 | High resolution structure of ESRRB nucleosome bound OCT4 at site a and site b | Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT | null | null | homo sapiens | homo sapiens | homo sapiens | Lian, T., Guan, R., Bai, Y. | 3.0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8sps/abangle/8sps.abangle | sabdab_dataset/8sps/annotation/8sps_N_VH.ann | sabdab_dataset/8sps/annotation/8sps_N_VL.ann | sabdab_dataset/8sps/imgt/8sps_N_H.ann | sabdab_dataset/8sps/imgt/8sps_N_L.ann | sabdab_dataset/8sps/sequence/8sps_raw.pdb | sabdab_dataset/8sps/sequence/8sps_N_VH.fa | sabdab_dataset/8sps/sequence/8sps_N_VL.fa | sabdab_dataset/8sps/structure/8sps.pdb | sabdab_dataset/8sps/structure/chothia/8sps.pdb | false | false | test |
8spu | K | k | 0 | G | H | F | protein | protein | protein | NA | NA | NA | histone h2a type 2-c | histone h2b type 2-e | histone h4 | TRANSCRIPTION/DNA | 06/28/23 | Structure of ESRRB nucleosome bound OCT4 at site c | Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT | null | null | homo sapiens | homo sapiens | homo sapiens | Lian, T., Guan, R., Bai, Y. | 2.8 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8spu/abangle/8spu.abangle | sabdab_dataset/8spu/annotation/8spu_K_VH.ann | sabdab_dataset/8spu/annotation/8spu_K_VL.ann | sabdab_dataset/8spu/imgt/8spu_K_H.ann | sabdab_dataset/8spu/imgt/8spu_K_L.ann | sabdab_dataset/8spu/sequence/8spu_raw.pdb | sabdab_dataset/8spu/sequence/8spu_K_VH.fa | sabdab_dataset/8spu/sequence/8spu_K_VL.fa | sabdab_dataset/8spu/structure/8spu.pdb | sabdab_dataset/8spu/structure/chothia/8spu.pdb | false | false | validation |
8spu | N | n | 0 | C | B | D | A | protein | protein | protein | protein | NA | NA | NA | NA | histone h2a type 2-c | histone h4 | histone h2b type 2-e | histone h3.1 | TRANSCRIPTION/DNA | 06/28/23 | Structure of ESRRB nucleosome bound OCT4 at site c | Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT | null | null | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Lian, T., Guan, R., Bai, Y. | 2.8 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8spu/abangle/8spu.abangle | sabdab_dataset/8spu/annotation/8spu_N_VH.ann | sabdab_dataset/8spu/annotation/8spu_N_VL.ann | sabdab_dataset/8spu/imgt/8spu_N_H.ann | sabdab_dataset/8spu/imgt/8spu_N_L.ann | sabdab_dataset/8spu/sequence/8spu_raw.pdb | sabdab_dataset/8spu/sequence/8spu_N_VH.fa | sabdab_dataset/8spu/sequence/8spu_N_VL.fa | sabdab_dataset/8spu/structure/8spu.pdb | sabdab_dataset/8spu/structure/chothia/8spu.pdb | false | false | validation |
8sr0 | H | L | 0 | D | protein | null | lymphocyte activation gene 3 protein | IMMUNOSUPPRESSANT | 09/06/23 | CryoEM structure of a therapeutic antibody (favezelimab) bound to human LAG3 local refined | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Mishra, A.K., Shahid, S., Karade, S.S., Mariuzza, R.A. | 3.53 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8sr0/abangle/8sr0.abangle | sabdab_dataset/8sr0/annotation/8sr0_H_VH.ann | sabdab_dataset/8sr0/annotation/8sr0_L_VL.ann | sabdab_dataset/8sr0/imgt/8sr0_H_H.ann | sabdab_dataset/8sr0/imgt/8sr0_L_L.ann | sabdab_dataset/8sr0/sequence/8sr0_raw.pdb | sabdab_dataset/8sr0/sequence/8sr0_H_VH.fa | sabdab_dataset/8sr0/sequence/8sr0_L_VL.fa | sabdab_dataset/8sr0/structure/8sr0.pdb | sabdab_dataset/8sr0/structure/chothia/8sr0.pdb | false | false | train |
8sr0 | Y | Z | 0 | X | protein | null | lymphocyte activation gene 3 protein | IMMUNOSUPPRESSANT | 09/06/23 | CryoEM structure of a therapeutic antibody (favezelimab) bound to human LAG3 local refined | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Mishra, A.K., Shahid, S., Karade, S.S., Mariuzza, R.A. | 3.53 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8sr0/abangle/8sr0.abangle | sabdab_dataset/8sr0/annotation/8sr0_Y_VH.ann | sabdab_dataset/8sr0/annotation/8sr0_Z_VL.ann | sabdab_dataset/8sr0/imgt/8sr0_Y_H.ann | sabdab_dataset/8sr0/imgt/8sr0_Z_L.ann | sabdab_dataset/8sr0/sequence/8sr0_raw.pdb | sabdab_dataset/8sr0/sequence/8sr0_Y_VH.fa | sabdab_dataset/8sr0/sequence/8sr0_Z_VL.fa | sabdab_dataset/8sr0/structure/8sr0.pdb | sabdab_dataset/8sr0/structure/chothia/8sr0.pdb | false | false | train |
8ssz | G | F | 0 | C | protein | null | neuronal acetylcholine receptor subunit beta-2 | TRANSPORT PROTEIN | 02/07/24 | The 2alpha3beta stoichiometry of full-length human alpha4beta2 nicotinic acetylcholine receptor in complex with acetylcholine and calcium | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Kang, G., Hibbs, R.E. | 2.64 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8ssz/abangle/8ssz.abangle | sabdab_dataset/8ssz/annotation/8ssz_G_VH.ann | sabdab_dataset/8ssz/annotation/8ssz_F_VL.ann | sabdab_dataset/8ssz/imgt/8ssz_G_H.ann | sabdab_dataset/8ssz/imgt/8ssz_F_L.ann | sabdab_dataset/8ssz/sequence/8ssz_raw.pdb | sabdab_dataset/8ssz/sequence/8ssz_G_VH.fa | sabdab_dataset/8ssz/sequence/8ssz_F_VL.fa | sabdab_dataset/8ssz/structure/8ssz.pdb | sabdab_dataset/8ssz/structure/chothia/8ssz.pdb | false | false | train |
8ssz | I | H | 0 | B | A | protein | protein | NA | NA | neuronal acetylcholine receptor subunit beta-2 | neuronal acetylcholine receptor subunit alpha-4 | TRANSPORT PROTEIN | 02/07/24 | The 2alpha3beta stoichiometry of full-length human alpha4beta2 nicotinic acetylcholine receptor in complex with acetylcholine and calcium | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | homo sapiens | Kang, G., Hibbs, R.E. | 2.64 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8ssz/abangle/8ssz.abangle | sabdab_dataset/8ssz/annotation/8ssz_I_VH.ann | sabdab_dataset/8ssz/annotation/8ssz_H_VL.ann | sabdab_dataset/8ssz/imgt/8ssz_I_H.ann | sabdab_dataset/8ssz/imgt/8ssz_H_L.ann | sabdab_dataset/8ssz/sequence/8ssz_raw.pdb | sabdab_dataset/8ssz/sequence/8ssz_I_VH.fa | sabdab_dataset/8ssz/sequence/8ssz_H_VL.fa | sabdab_dataset/8ssz/structure/8ssz.pdb | sabdab_dataset/8ssz/structure/chothia/8ssz.pdb | false | false | train |
8ssz | K | J | 0 | E | D | protein | protein | NA | NA | neuronal acetylcholine receptor subunit beta-2 | neuronal acetylcholine receptor subunit alpha-4 | TRANSPORT PROTEIN | 02/07/24 | The 2alpha3beta stoichiometry of full-length human alpha4beta2 nicotinic acetylcholine receptor in complex with acetylcholine and calcium | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | homo sapiens | Kang, G., Hibbs, R.E. | 2.64 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8ssz/abangle/8ssz.abangle | sabdab_dataset/8ssz/annotation/8ssz_K_VH.ann | sabdab_dataset/8ssz/annotation/8ssz_J_VL.ann | sabdab_dataset/8ssz/imgt/8ssz_K_H.ann | sabdab_dataset/8ssz/imgt/8ssz_J_L.ann | sabdab_dataset/8ssz/sequence/8ssz_raw.pdb | sabdab_dataset/8ssz/sequence/8ssz_K_VH.fa | sabdab_dataset/8ssz/sequence/8ssz_J_VL.fa | sabdab_dataset/8ssz/structure/8ssz.pdb | sabdab_dataset/8ssz/structure/chothia/8ssz.pdb | false | false | train |
8st0 | G | F | 0 | C | protein | null | neuronal acetylcholine receptor subunit beta-2 | TRANSPORT PROTEIN | 02/07/24 | The 2alpha3beta stoichiometry of full-length human alpha4beta2 nicotinic acetylcholine receptor in complex with acetylcholine | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Kang, G., Hibbs, R.E. | 2.4 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8st0/abangle/8st0.abangle | sabdab_dataset/8st0/annotation/8st0_G_VH.ann | sabdab_dataset/8st0/annotation/8st0_F_VL.ann | sabdab_dataset/8st0/imgt/8st0_G_H.ann | sabdab_dataset/8st0/imgt/8st0_F_L.ann | sabdab_dataset/8st0/sequence/8st0_raw.pdb | sabdab_dataset/8st0/sequence/8st0_G_VH.fa | sabdab_dataset/8st0/sequence/8st0_F_VL.fa | sabdab_dataset/8st0/structure/8st0.pdb | sabdab_dataset/8st0/structure/chothia/8st0.pdb | false | false | train |
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