pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 365
values | r_factor stringclasses 358
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values | abangle stringlengths 40 40 ⌀ | annotation_H stringlengths 44 44 ⌀ | annotation_L stringlengths 44 44 ⌀ | imgt_H stringlengths 37 37 ⌀ | imgt_L stringlengths 37 37 ⌀ | sequence_raw stringlengths 41 41 | sequence_H stringlengths 41 41 ⌀ | sequence_L stringlengths 41 41 ⌀ | structure stringlengths 38 38 | structure_chothia stringlengths 46 46 | in_nr_set bool 2
classes | curated_quality_dataset bool 2
classes | split stringclasses 3
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8tjo | E | F | 0 | B | protein | null | eryai,6-deoxyerythronolide-b synthase erya3, modules 5 and6 | BIOSYNTHETIC PROTEIN/IMMUNE SYSTEM | 07/24/24 | Crosslinked 6-deoxyerythronolide B synthase (DEBS) Module 1 in complex with antibody fragment 1B2: Crosslinked Intra-State 1 | Homo sapiens; Saccharopolyspora erythraea | homo sapiens | homo sapiens | saccharopolyspora erythraea | Cogan, D.P., Soohoo, A.M., Chen, M., Brodsky, K.L., Liu, Y., Khosla, C. | 3.61 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8tjo/abangle/8tjo.abangle | sabdab_dataset/8tjo/annotation/8tjo_E_VH.ann | sabdab_dataset/8tjo/annotation/8tjo_F_VL.ann | sabdab_dataset/8tjo/imgt/8tjo_E_H.ann | sabdab_dataset/8tjo/imgt/8tjo_F_L.ann | sabdab_dataset/8tjo/sequence/8tjo_raw.pdb | sabdab_dataset/8tjo/sequence/8tjo_E_VH.fa | sabdab_dataset/8tjo/sequence/8tjo_F_VL.fa | sabdab_dataset/8tjo/structure/8tjo.pdb | sabdab_dataset/8tjo/structure/chothia/8tjo.pdb | false | false | test |
8tjr | H | L | 0 | E | B | protein | protein | NA | NA | envelope glycoprotein gp41 | envelope glycoprotein gp160 | Viral Protein/Immune System | 07/31/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-a.01 FAB | Human immunodeficiency virus 1; Macaca | macaca | macaca | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Morano, N.C., Hoyt, F., Hansen, B., Fischer, E., Shapiro, L. | 3.29 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8tjr/abangle/8tjr.abangle | sabdab_dataset/8tjr/annotation/8tjr_H_VH.ann | sabdab_dataset/8tjr/annotation/8tjr_L_VL.ann | sabdab_dataset/8tjr/imgt/8tjr_H_H.ann | sabdab_dataset/8tjr/imgt/8tjr_L_L.ann | sabdab_dataset/8tjr/sequence/8tjr_raw.pdb | sabdab_dataset/8tjr/sequence/8tjr_H_VH.fa | sabdab_dataset/8tjr/sequence/8tjr_L_VL.fa | sabdab_dataset/8tjr/structure/8tjr.pdb | sabdab_dataset/8tjr/structure/chothia/8tjr.pdb | false | false | train |
8tjr | J | K | 0 | F | C | D | protein | protein | protein | NA | NA | NA | envelope glycoprotein gp41 | envelope glycoprotein gp160 | envelope glycoprotein gp41 | Viral Protein/Immune System | 07/31/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-a.01 FAB | Human immunodeficiency virus 1; Macaca | macaca | macaca | human immunodeficiency virus 1 | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Morano, N.C., Hoyt, F., Hansen, B., Fischer, E., Shapiro, L. | 3.29 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8tjr/abangle/8tjr.abangle | sabdab_dataset/8tjr/annotation/8tjr_J_VH.ann | sabdab_dataset/8tjr/annotation/8tjr_K_VL.ann | sabdab_dataset/8tjr/imgt/8tjr_J_H.ann | sabdab_dataset/8tjr/imgt/8tjr_K_L.ann | sabdab_dataset/8tjr/sequence/8tjr_raw.pdb | sabdab_dataset/8tjr/sequence/8tjr_J_VH.fa | sabdab_dataset/8tjr/sequence/8tjr_K_VL.fa | sabdab_dataset/8tjr/structure/8tjr.pdb | sabdab_dataset/8tjr/structure/chothia/8tjr.pdb | false | false | validation |
8tjs | P | S | 0 | B | protein | null | envelope glycoprotein gp41 | Viral PROTEIN/iMMUNE SYSTEM | 07/31/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB | Human immunodeficiency virus 1; Macaca | macaca | macaca | human immunodeficiency virus 1 | Morano, N.C., Becker, J.E., Shapiro, L. | 3.31 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8tjs/abangle/8tjs.abangle | sabdab_dataset/8tjs/annotation/8tjs_P_VH.ann | sabdab_dataset/8tjs/annotation/8tjs_S_VL.ann | null | null | sabdab_dataset/8tjs/sequence/8tjs_raw.pdb | sabdab_dataset/8tjs/sequence/8tjs_P_VH.fa | sabdab_dataset/8tjs/sequence/8tjs_S_VL.fa | sabdab_dataset/8tjs/structure/8tjs.pdb | sabdab_dataset/8tjs/structure/chothia/8tjs.pdb | false | false | validation |
8tjs | Q | T | 0 | I | O | protein | protein | NA | NA | envelope glycoprotein gp41 | envelope glycoprotein gp160 | Viral PROTEIN/iMMUNE SYSTEM | 07/31/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB | Human immunodeficiency virus 1; Macaca | macaca | macaca | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Morano, N.C., Becker, J.E., Shapiro, L. | 3.31 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8tjs/abangle/8tjs.abangle | sabdab_dataset/8tjs/annotation/8tjs_Q_VH.ann | sabdab_dataset/8tjs/annotation/8tjs_T_VL.ann | null | null | sabdab_dataset/8tjs/sequence/8tjs_raw.pdb | sabdab_dataset/8tjs/sequence/8tjs_Q_VH.fa | sabdab_dataset/8tjs/sequence/8tjs_T_VL.fa | sabdab_dataset/8tjs/structure/8tjs.pdb | sabdab_dataset/8tjs/structure/chothia/8tjs.pdb | false | false | test |
8tjs | R | U | 0 | H | N | protein | protein | NA | NA | envelope glycoprotein gp41 | envelope glycoprotein gp160 | Viral PROTEIN/iMMUNE SYSTEM | 07/31/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB | Human immunodeficiency virus 1; Macaca | macaca | macaca | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Morano, N.C., Becker, J.E., Shapiro, L. | 3.31 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8tjs/abangle/8tjs.abangle | sabdab_dataset/8tjs/annotation/8tjs_R_VH.ann | sabdab_dataset/8tjs/annotation/8tjs_U_VL.ann | null | null | sabdab_dataset/8tjs/sequence/8tjs_raw.pdb | sabdab_dataset/8tjs/sequence/8tjs_R_VH.fa | sabdab_dataset/8tjs/sequence/8tjs_U_VL.fa | sabdab_dataset/8tjs/structure/8tjs.pdb | sabdab_dataset/8tjs/structure/chothia/8tjs.pdb | false | false | validation |
8tjt | D | A | 0 | null | null | null | null | IMMUNE SYSTEM | 02/14/24 | The Fab fragment of an anti-glucagon receptor (GCGR) antibody | Homo sapiens | homo sapiens | homo sapiens | null | Dai, J., Carter, P.J., Sudhamsu, J., Kung, J. | 2.7 | X-RAY DIFFRACTION | 0.252 | 0.204 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tjt/abangle/8tjt.abangle | sabdab_dataset/8tjt/annotation/8tjt_D_VH.ann | sabdab_dataset/8tjt/annotation/8tjt_A_VL.ann | sabdab_dataset/8tjt/imgt/8tjt_D_H.ann | sabdab_dataset/8tjt/imgt/8tjt_A_L.ann | sabdab_dataset/8tjt/sequence/8tjt_raw.pdb | sabdab_dataset/8tjt/sequence/8tjt_D_VH.fa | sabdab_dataset/8tjt/sequence/8tjt_A_VL.fa | sabdab_dataset/8tjt/structure/8tjt.pdb | sabdab_dataset/8tjt/structure/chothia/8tjt.pdb | false | false | train |
8tjt | E | B | 0 | null | null | null | null | IMMUNE SYSTEM | 02/14/24 | The Fab fragment of an anti-glucagon receptor (GCGR) antibody | Homo sapiens | homo sapiens | homo sapiens | null | Dai, J., Carter, P.J., Sudhamsu, J., Kung, J. | 2.7 | X-RAY DIFFRACTION | 0.252 | 0.204 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tjt/abangle/8tjt.abangle | sabdab_dataset/8tjt/annotation/8tjt_E_VH.ann | sabdab_dataset/8tjt/annotation/8tjt_B_VL.ann | sabdab_dataset/8tjt/imgt/8tjt_E_H.ann | sabdab_dataset/8tjt/imgt/8tjt_B_L.ann | sabdab_dataset/8tjt/sequence/8tjt_raw.pdb | sabdab_dataset/8tjt/sequence/8tjt_E_VH.fa | sabdab_dataset/8tjt/sequence/8tjt_B_VL.fa | sabdab_dataset/8tjt/structure/8tjt.pdb | sabdab_dataset/8tjt/structure/chothia/8tjt.pdb | false | false | train |
8tjt | F | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/14/24 | The Fab fragment of an anti-glucagon receptor (GCGR) antibody | Homo sapiens | homo sapiens | homo sapiens | null | Dai, J., Carter, P.J., Sudhamsu, J., Kung, J. | 2.7 | X-RAY DIFFRACTION | 0.252 | 0.204 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tjt/abangle/8tjt.abangle | sabdab_dataset/8tjt/annotation/8tjt_F_VH.ann | sabdab_dataset/8tjt/annotation/8tjt_C_VL.ann | sabdab_dataset/8tjt/imgt/8tjt_F_H.ann | sabdab_dataset/8tjt/imgt/8tjt_C_L.ann | sabdab_dataset/8tjt/sequence/8tjt_raw.pdb | sabdab_dataset/8tjt/sequence/8tjt_F_VH.fa | sabdab_dataset/8tjt/sequence/8tjt_C_VL.fa | sabdab_dataset/8tjt/structure/8tjt.pdb | sabdab_dataset/8tjt/structure/chothia/8tjt.pdb | false | false | train |
8tjt | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/14/24 | The Fab fragment of an anti-glucagon receptor (GCGR) antibody | Homo sapiens | homo sapiens | homo sapiens | null | Dai, J., Carter, P.J., Sudhamsu, J., Kung, J. | 2.7 | X-RAY DIFFRACTION | 0.252 | 0.204 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tjt/abangle/8tjt.abangle | sabdab_dataset/8tjt/annotation/8tjt_H_VH.ann | sabdab_dataset/8tjt/annotation/8tjt_L_VL.ann | sabdab_dataset/8tjt/imgt/8tjt_H_H.ann | sabdab_dataset/8tjt/imgt/8tjt_L_L.ann | sabdab_dataset/8tjt/sequence/8tjt_raw.pdb | sabdab_dataset/8tjt/sequence/8tjt_H_VH.fa | sabdab_dataset/8tjt/sequence/8tjt_L_VL.fa | sabdab_dataset/8tjt/structure/8tjt.pdb | sabdab_dataset/8tjt/structure/chothia/8tjt.pdb | false | false | validation |
8tkc | G | H | 0 | B | A | protein | protein | NA | NA | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tkc/abangle/8tkc.abangle | sabdab_dataset/8tkc/annotation/8tkc_G_VH.ann | sabdab_dataset/8tkc/annotation/8tkc_H_VL.ann | sabdab_dataset/8tkc/imgt/8tkc_G_H.ann | sabdab_dataset/8tkc/imgt/8tkc_H_L.ann | sabdab_dataset/8tkc/sequence/8tkc_raw.pdb | sabdab_dataset/8tkc/sequence/8tkc_G_VH.fa | sabdab_dataset/8tkc/sequence/8tkc_H_VL.fa | sabdab_dataset/8tkc/structure/8tkc.pdb | sabdab_dataset/8tkc/structure/chothia/8tkc.pdb | false | false | train |
8tkc | I | J | 0 | D | C | protein | protein | NA | NA | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tkc/abangle/8tkc.abangle | sabdab_dataset/8tkc/annotation/8tkc_I_VH.ann | sabdab_dataset/8tkc/annotation/8tkc_J_VL.ann | sabdab_dataset/8tkc/imgt/8tkc_I_H.ann | sabdab_dataset/8tkc/imgt/8tkc_J_L.ann | sabdab_dataset/8tkc/sequence/8tkc_raw.pdb | sabdab_dataset/8tkc/sequence/8tkc_I_VH.fa | sabdab_dataset/8tkc/sequence/8tkc_J_VL.fa | sabdab_dataset/8tkc/structure/8tkc.pdb | sabdab_dataset/8tkc/structure/chothia/8tkc.pdb | false | false | train |
8tkc | K | L | 0 | F | E | protein | protein | NA | NA | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tkc/abangle/8tkc.abangle | sabdab_dataset/8tkc/annotation/8tkc_K_VH.ann | sabdab_dataset/8tkc/annotation/8tkc_L_VL.ann | sabdab_dataset/8tkc/imgt/8tkc_K_H.ann | sabdab_dataset/8tkc/imgt/8tkc_L_L.ann | sabdab_dataset/8tkc/sequence/8tkc_raw.pdb | sabdab_dataset/8tkc/sequence/8tkc_K_VH.fa | sabdab_dataset/8tkc/sequence/8tkc_L_VL.fa | sabdab_dataset/8tkc/structure/8tkc.pdb | sabdab_dataset/8tkc/structure/chothia/8tkc.pdb | false | false | train |
8tl2 | G | H | 0 | B | A | protein | protein | NA | NA | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tl2/abangle/8tl2.abangle | sabdab_dataset/8tl2/annotation/8tl2_G_VH.ann | sabdab_dataset/8tl2/annotation/8tl2_H_VL.ann | sabdab_dataset/8tl2/imgt/8tl2_G_H.ann | sabdab_dataset/8tl2/imgt/8tl2_H_L.ann | sabdab_dataset/8tl2/sequence/8tl2_raw.pdb | sabdab_dataset/8tl2/sequence/8tl2_G_VH.fa | sabdab_dataset/8tl2/sequence/8tl2_H_VL.fa | sabdab_dataset/8tl2/structure/8tl2.pdb | sabdab_dataset/8tl2/structure/chothia/8tl2.pdb | false | false | validation |
8tl2 | K | L | 0 | F | D | E | protein | protein | protein | NA | NA | NA | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tl2/abangle/8tl2.abangle | sabdab_dataset/8tl2/annotation/8tl2_K_VH.ann | sabdab_dataset/8tl2/annotation/8tl2_L_VL.ann | sabdab_dataset/8tl2/imgt/8tl2_K_H.ann | sabdab_dataset/8tl2/imgt/8tl2_L_L.ann | sabdab_dataset/8tl2/sequence/8tl2_raw.pdb | sabdab_dataset/8tl2/sequence/8tl2_K_VH.fa | sabdab_dataset/8tl2/sequence/8tl2_L_VL.fa | sabdab_dataset/8tl2/structure/8tl2.pdb | sabdab_dataset/8tl2/structure/chothia/8tl2.pdb | false | false | validation |
8tl3 | G | H | 0 | B | A | protein | protein | NA | NA | bg505 ds-sosip glycoprotein gp41 | bg505 ds-sosip glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-d.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tl3/abangle/8tl3.abangle | sabdab_dataset/8tl3/annotation/8tl3_G_VH.ann | sabdab_dataset/8tl3/annotation/8tl3_H_VL.ann | sabdab_dataset/8tl3/imgt/8tl3_G_H.ann | sabdab_dataset/8tl3/imgt/8tl3_H_L.ann | sabdab_dataset/8tl3/sequence/8tl3_raw.pdb | sabdab_dataset/8tl3/sequence/8tl3_G_VH.fa | sabdab_dataset/8tl3/sequence/8tl3_H_VL.fa | sabdab_dataset/8tl3/structure/8tl3.pdb | sabdab_dataset/8tl3/structure/chothia/8tl3.pdb | false | false | train |
8tl3 | I | J | 0 | D | C | protein | protein | NA | NA | bg505 ds-sosip glycoprotein gp41 | bg505 ds-sosip glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-d.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tl3/abangle/8tl3.abangle | sabdab_dataset/8tl3/annotation/8tl3_I_VH.ann | sabdab_dataset/8tl3/annotation/8tl3_J_VL.ann | sabdab_dataset/8tl3/imgt/8tl3_I_H.ann | sabdab_dataset/8tl3/imgt/8tl3_J_L.ann | sabdab_dataset/8tl3/sequence/8tl3_raw.pdb | sabdab_dataset/8tl3/sequence/8tl3_I_VH.fa | sabdab_dataset/8tl3/sequence/8tl3_J_VL.fa | sabdab_dataset/8tl3/structure/8tl3.pdb | sabdab_dataset/8tl3/structure/chothia/8tl3.pdb | false | false | test |
8tl3 | K | L | 0 | F | E | protein | protein | NA | NA | bg505 ds-sosip glycoprotein gp41 | bg505 ds-sosip glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-d.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tl3/abangle/8tl3.abangle | sabdab_dataset/8tl3/annotation/8tl3_K_VH.ann | sabdab_dataset/8tl3/annotation/8tl3_L_VL.ann | sabdab_dataset/8tl3/imgt/8tl3_K_H.ann | sabdab_dataset/8tl3/imgt/8tl3_L_L.ann | sabdab_dataset/8tl3/sequence/8tl3_raw.pdb | sabdab_dataset/8tl3/sequence/8tl3_K_VH.fa | sabdab_dataset/8tl3/sequence/8tl3_L_VL.fa | sabdab_dataset/8tl3/structure/8tl3.pdb | sabdab_dataset/8tl3/structure/chothia/8tl3.pdb | false | false | test |
8tl4 | G | H | 0 | B | A | protein | protein | NA | NA | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-e.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tl4/abangle/8tl4.abangle | sabdab_dataset/8tl4/annotation/8tl4_G_VH.ann | sabdab_dataset/8tl4/annotation/8tl4_H_VL.ann | sabdab_dataset/8tl4/imgt/8tl4_G_H.ann | sabdab_dataset/8tl4/imgt/8tl4_H_L.ann | sabdab_dataset/8tl4/sequence/8tl4_raw.pdb | sabdab_dataset/8tl4/sequence/8tl4_G_VH.fa | sabdab_dataset/8tl4/sequence/8tl4_H_VL.fa | sabdab_dataset/8tl4/structure/8tl4.pdb | sabdab_dataset/8tl4/structure/chothia/8tl4.pdb | false | false | train |
8tl4 | I | J | 0 | D | C | protein | protein | NA | NA | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-e.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tl4/abangle/8tl4.abangle | sabdab_dataset/8tl4/annotation/8tl4_I_VH.ann | sabdab_dataset/8tl4/annotation/8tl4_J_VL.ann | sabdab_dataset/8tl4/imgt/8tl4_I_H.ann | sabdab_dataset/8tl4/imgt/8tl4_J_L.ann | sabdab_dataset/8tl4/sequence/8tl4_raw.pdb | sabdab_dataset/8tl4/sequence/8tl4_I_VH.fa | sabdab_dataset/8tl4/sequence/8tl4_J_VL.fa | sabdab_dataset/8tl4/structure/8tl4.pdb | sabdab_dataset/8tl4/structure/chothia/8tl4.pdb | false | false | train |
8tl4 | K | L | 0 | F | E | protein | protein | NA | NA | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-e.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tl4/abangle/8tl4.abangle | sabdab_dataset/8tl4/annotation/8tl4_K_VH.ann | sabdab_dataset/8tl4/annotation/8tl4_L_VL.ann | sabdab_dataset/8tl4/imgt/8tl4_K_H.ann | sabdab_dataset/8tl4/imgt/8tl4_L_L.ann | sabdab_dataset/8tl4/sequence/8tl4_raw.pdb | sabdab_dataset/8tl4/sequence/8tl4_K_VH.fa | sabdab_dataset/8tl4/sequence/8tl4_L_VL.fa | sabdab_dataset/8tl4/structure/8tl4.pdb | sabdab_dataset/8tl4/structure/chothia/8tl4.pdb | false | false | train |
8tl5 | G | H | 0 | B | A | protein | protein | NA | NA | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tl5/abangle/8tl5.abangle | sabdab_dataset/8tl5/annotation/8tl5_G_VH.ann | sabdab_dataset/8tl5/annotation/8tl5_H_VL.ann | sabdab_dataset/8tl5/imgt/8tl5_G_H.ann | sabdab_dataset/8tl5/imgt/8tl5_H_L.ann | sabdab_dataset/8tl5/sequence/8tl5_raw.pdb | sabdab_dataset/8tl5/sequence/8tl5_G_VH.fa | sabdab_dataset/8tl5/sequence/8tl5_H_VL.fa | sabdab_dataset/8tl5/structure/8tl5.pdb | sabdab_dataset/8tl5/structure/chothia/8tl5.pdb | false | false | train |
8tl5 | I | J | 0 | D | C | protein | protein | NA | NA | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tl5/abangle/8tl5.abangle | sabdab_dataset/8tl5/annotation/8tl5_I_VH.ann | sabdab_dataset/8tl5/annotation/8tl5_J_VL.ann | sabdab_dataset/8tl5/imgt/8tl5_I_H.ann | sabdab_dataset/8tl5/imgt/8tl5_J_L.ann | sabdab_dataset/8tl5/sequence/8tl5_raw.pdb | sabdab_dataset/8tl5/sequence/8tl5_I_VH.fa | sabdab_dataset/8tl5/sequence/8tl5_J_VL.fa | sabdab_dataset/8tl5/structure/8tl5.pdb | sabdab_dataset/8tl5/structure/chothia/8tl5.pdb | false | false | train |
8tl5 | K | L | 0 | F | E | protein | protein | NA | NA | bg505 ds-sosip transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/28/24 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pletnev, S., Hoyt, F., Fischer, E., Kwong, P. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tl5/abangle/8tl5.abangle | sabdab_dataset/8tl5/annotation/8tl5_K_VH.ann | sabdab_dataset/8tl5/annotation/8tl5_L_VL.ann | sabdab_dataset/8tl5/imgt/8tl5_K_H.ann | sabdab_dataset/8tl5/imgt/8tl5_L_L.ann | sabdab_dataset/8tl5/sequence/8tl5_raw.pdb | sabdab_dataset/8tl5/sequence/8tl5_K_VH.fa | sabdab_dataset/8tl5/sequence/8tl5_L_VL.fa | sabdab_dataset/8tl5/structure/8tl5.pdb | sabdab_dataset/8tl5/structure/chothia/8tl5.pdb | false | false | train |
8tlm | A | B | 0 | C | protein | null | c-c chemokine receptor type 8, green fluorescent proteinfusion | STRUCTURAL PROTEIN | 12/20/23 | Structure of a class A GPCR/Fab complex | Aequorea victoria; Homo sapiens; Oryctolagus cuniculus | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens, aequorea victoria | Sun, D., Johnson, M., Masureel, M. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tlm/abangle/8tlm.abangle | sabdab_dataset/8tlm/annotation/8tlm_A_VH.ann | sabdab_dataset/8tlm/annotation/8tlm_B_VL.ann | sabdab_dataset/8tlm/imgt/8tlm_A_H.ann | sabdab_dataset/8tlm/imgt/8tlm_B_L.ann | sabdab_dataset/8tlm/sequence/8tlm_raw.pdb | sabdab_dataset/8tlm/sequence/8tlm_A_VH.fa | sabdab_dataset/8tlm/sequence/8tlm_B_VL.fa | sabdab_dataset/8tlm/structure/8tlm.pdb | sabdab_dataset/8tlm/structure/chothia/8tlm.pdb | false | false | train |
8tm1 | H | L | 0 | A | B | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/17/24 | Antibody N3-1 bound to RBDs in the up and down conformations | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Hsieh, C.-L., McLellan, J.S. | 2.79 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tm1/abangle/8tm1.abangle | sabdab_dataset/8tm1/annotation/8tm1_H_VH.ann | sabdab_dataset/8tm1/annotation/8tm1_L_VL.ann | sabdab_dataset/8tm1/imgt/8tm1_H_H.ann | sabdab_dataset/8tm1/imgt/8tm1_L_L.ann | sabdab_dataset/8tm1/sequence/8tm1_raw.pdb | sabdab_dataset/8tm1/sequence/8tm1_H_VH.fa | sabdab_dataset/8tm1/sequence/8tm1_L_VL.fa | sabdab_dataset/8tm1/structure/8tm1.pdb | sabdab_dataset/8tm1/structure/chothia/8tm1.pdb | false | false | train |
8tma | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/17/24 | Antibody N3-1 bound to RBD in the up conformation | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Hsieh, C.-L., McLellan, J.S. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tma/abangle/8tma.abangle | sabdab_dataset/8tma/annotation/8tma_H_VH.ann | sabdab_dataset/8tma/annotation/8tma_L_VL.ann | sabdab_dataset/8tma/imgt/8tma_H_H.ann | sabdab_dataset/8tma/imgt/8tma_L_L.ann | sabdab_dataset/8tma/sequence/8tma_raw.pdb | sabdab_dataset/8tma/sequence/8tma_H_VH.fa | sabdab_dataset/8tma/sequence/8tma_L_VL.fa | sabdab_dataset/8tma/structure/8tma.pdb | sabdab_dataset/8tma/structure/chothia/8tma.pdb | false | false | train |
8tmb | H | L | 0 | A | E | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C12 and 20 mM MgCl2, State MG20-1 | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmb/abangle/8tmb.abangle | sabdab_dataset/8tmb/annotation/8tmb_H_VH.ann | sabdab_dataset/8tmb/annotation/8tmb_L_VL.ann | sabdab_dataset/8tmb/imgt/8tmb_H_H.ann | sabdab_dataset/8tmb/imgt/8tmb_L_L.ann | sabdab_dataset/8tmb/sequence/8tmb_raw.pdb | sabdab_dataset/8tmb/sequence/8tmb_H_VH.fa | sabdab_dataset/8tmb/sequence/8tmb_L_VL.fa | sabdab_dataset/8tmb/structure/8tmb.pdb | sabdab_dataset/8tmb/structure/chothia/8tmb.pdb | false | false | test |
8tmc | F | G | 0 | C | B | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C12 and 20 mM MgCl2, State MG20-2 | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmc/abangle/8tmc.abangle | sabdab_dataset/8tmc/annotation/8tmc_F_VH.ann | sabdab_dataset/8tmc/annotation/8tmc_G_VL.ann | sabdab_dataset/8tmc/imgt/8tmc_F_H.ann | sabdab_dataset/8tmc/imgt/8tmc_G_L.ann | sabdab_dataset/8tmc/sequence/8tmc_raw.pdb | sabdab_dataset/8tmc/sequence/8tmc_F_VH.fa | sabdab_dataset/8tmc/sequence/8tmc_G_VL.fa | sabdab_dataset/8tmc/structure/8tmc.pdb | sabdab_dataset/8tmc/structure/chothia/8tmc.pdb | false | false | train |
8tmc | H | L | 0 | A | E | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C12 and 20 mM MgCl2, State MG20-2 | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmc/abangle/8tmc.abangle | sabdab_dataset/8tmc/annotation/8tmc_H_VH.ann | sabdab_dataset/8tmc/annotation/8tmc_L_VL.ann | sabdab_dataset/8tmc/imgt/8tmc_H_H.ann | sabdab_dataset/8tmc/imgt/8tmc_L_L.ann | sabdab_dataset/8tmc/sequence/8tmc_raw.pdb | sabdab_dataset/8tmc/sequence/8tmc_H_VH.fa | sabdab_dataset/8tmc/sequence/8tmc_L_VL.fa | sabdab_dataset/8tmc/structure/8tmc.pdb | sabdab_dataset/8tmc/structure/chothia/8tmc.pdb | false | false | validation |
8tmd | H | L | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C18 and 100 uM MgCl2, State MG0.1-1A | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmd/abangle/8tmd.abangle | sabdab_dataset/8tmd/annotation/8tmd_H_VH.ann | sabdab_dataset/8tmd/annotation/8tmd_L_VL.ann | sabdab_dataset/8tmd/imgt/8tmd_H_H.ann | sabdab_dataset/8tmd/imgt/8tmd_L_L.ann | sabdab_dataset/8tmd/sequence/8tmd_raw.pdb | sabdab_dataset/8tmd/sequence/8tmd_H_VH.fa | sabdab_dataset/8tmd/sequence/8tmd_L_VL.fa | sabdab_dataset/8tmd/structure/8tmd.pdb | sabdab_dataset/8tmd/structure/chothia/8tmd.pdb | false | false | train |
8tme | H | L | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C18 and 100 uM MgCl2, State MG0.1-1B | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tme/abangle/8tme.abangle | sabdab_dataset/8tme/annotation/8tme_H_VH.ann | sabdab_dataset/8tme/annotation/8tme_L_VL.ann | sabdab_dataset/8tme/imgt/8tme_H_H.ann | sabdab_dataset/8tme/imgt/8tme_L_L.ann | sabdab_dataset/8tme/sequence/8tme_raw.pdb | sabdab_dataset/8tme/sequence/8tme_H_VH.fa | sabdab_dataset/8tme/sequence/8tme_L_VL.fa | sabdab_dataset/8tme/structure/8tme.pdb | sabdab_dataset/8tme/structure/chothia/8tme.pdb | false | false | train |
8tmf | H | L | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C18 and 100 uM MgCl2, State MG0.1-1C | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmf/abangle/8tmf.abangle | sabdab_dataset/8tmf/annotation/8tmf_H_VH.ann | sabdab_dataset/8tmf/annotation/8tmf_L_VL.ann | sabdab_dataset/8tmf/imgt/8tmf_H_H.ann | sabdab_dataset/8tmf/imgt/8tmf_L_L.ann | sabdab_dataset/8tmf/sequence/8tmf_raw.pdb | sabdab_dataset/8tmf/sequence/8tmf_H_VH.fa | sabdab_dataset/8tmf/sequence/8tmf_L_VL.fa | sabdab_dataset/8tmf/structure/8tmf.pdb | sabdab_dataset/8tmf/structure/chothia/8tmf.pdb | false | false | train |
8tmg | F | G | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C18 and 100 uM MgCl2, State MG0.1-2A | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmg/abangle/8tmg.abangle | sabdab_dataset/8tmg/annotation/8tmg_F_VH.ann | sabdab_dataset/8tmg/annotation/8tmg_G_VL.ann | sabdab_dataset/8tmg/imgt/8tmg_F_H.ann | sabdab_dataset/8tmg/imgt/8tmg_G_L.ann | sabdab_dataset/8tmg/sequence/8tmg_raw.pdb | sabdab_dataset/8tmg/sequence/8tmg_F_VH.fa | sabdab_dataset/8tmg/sequence/8tmg_G_VL.fa | sabdab_dataset/8tmg/structure/8tmg.pdb | sabdab_dataset/8tmg/structure/chothia/8tmg.pdb | false | false | test |
8tmg | H | L | 0 | D | C | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C18 and 100 uM MgCl2, State MG0.1-2A | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmg/abangle/8tmg.abangle | sabdab_dataset/8tmg/annotation/8tmg_H_VH.ann | sabdab_dataset/8tmg/annotation/8tmg_L_VL.ann | sabdab_dataset/8tmg/imgt/8tmg_H_H.ann | sabdab_dataset/8tmg/imgt/8tmg_L_L.ann | sabdab_dataset/8tmg/sequence/8tmg_raw.pdb | sabdab_dataset/8tmg/sequence/8tmg_H_VH.fa | sabdab_dataset/8tmg/sequence/8tmg_L_VL.fa | sabdab_dataset/8tmg/structure/8tmg.pdb | sabdab_dataset/8tmg/structure/chothia/8tmg.pdb | false | false | train |
8tmh | F | G | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C18 and 100 uM MgCl2, State MG0.1-2B | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmh/abangle/8tmh.abangle | sabdab_dataset/8tmh/annotation/8tmh_F_VH.ann | sabdab_dataset/8tmh/annotation/8tmh_G_VL.ann | sabdab_dataset/8tmh/imgt/8tmh_F_H.ann | sabdab_dataset/8tmh/imgt/8tmh_G_L.ann | sabdab_dataset/8tmh/sequence/8tmh_raw.pdb | sabdab_dataset/8tmh/sequence/8tmh_F_VH.fa | sabdab_dataset/8tmh/sequence/8tmh_G_VL.fa | sabdab_dataset/8tmh/structure/8tmh.pdb | sabdab_dataset/8tmh/structure/chothia/8tmh.pdb | false | false | train |
8tmh | H | L | 0 | D | C | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C18 and 100 uM MgCl2, State MG0.1-2B | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmh/abangle/8tmh.abangle | sabdab_dataset/8tmh/annotation/8tmh_H_VH.ann | sabdab_dataset/8tmh/annotation/8tmh_L_VL.ann | sabdab_dataset/8tmh/imgt/8tmh_H_H.ann | sabdab_dataset/8tmh/imgt/8tmh_L_L.ann | sabdab_dataset/8tmh/sequence/8tmh_raw.pdb | sabdab_dataset/8tmh/sequence/8tmh_H_VH.fa | sabdab_dataset/8tmh/sequence/8tmh_L_VL.fa | sabdab_dataset/8tmh/structure/8tmh.pdb | sabdab_dataset/8tmh/structure/chothia/8tmh.pdb | false | false | validation |
8tmi | F | G | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C18 and 100 uM MgCl2, State MG0.1-2C | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmi/abangle/8tmi.abangle | sabdab_dataset/8tmi/annotation/8tmi_F_VH.ann | sabdab_dataset/8tmi/annotation/8tmi_G_VL.ann | sabdab_dataset/8tmi/imgt/8tmi_F_H.ann | sabdab_dataset/8tmi/imgt/8tmi_G_L.ann | sabdab_dataset/8tmi/sequence/8tmi_raw.pdb | sabdab_dataset/8tmi/sequence/8tmi_F_VH.fa | sabdab_dataset/8tmi/sequence/8tmi_G_VL.fa | sabdab_dataset/8tmi/structure/8tmi.pdb | sabdab_dataset/8tmi/structure/chothia/8tmi.pdb | false | false | test |
8tmi | H | L | 0 | D | C | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C18 and 100 uM MgCl2, State MG0.1-2C | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmi/abangle/8tmi.abangle | sabdab_dataset/8tmi/annotation/8tmi_H_VH.ann | sabdab_dataset/8tmi/annotation/8tmi_L_VL.ann | sabdab_dataset/8tmi/imgt/8tmi_H_H.ann | sabdab_dataset/8tmi/imgt/8tmi_L_L.ann | sabdab_dataset/8tmi/sequence/8tmi_raw.pdb | sabdab_dataset/8tmi/sequence/8tmi_H_VH.fa | sabdab_dataset/8tmi/sequence/8tmi_L_VL.fa | sabdab_dataset/8tmi/structure/8tmi.pdb | sabdab_dataset/8tmi/structure/chothia/8tmi.pdb | false | false | train |
8tmj | F | G | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C18 and 100 uM MgCl2, State MG0.1-2D | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmj/abangle/8tmj.abangle | sabdab_dataset/8tmj/annotation/8tmj_F_VH.ann | sabdab_dataset/8tmj/annotation/8tmj_G_VL.ann | sabdab_dataset/8tmj/imgt/8tmj_F_H.ann | sabdab_dataset/8tmj/imgt/8tmj_G_L.ann | sabdab_dataset/8tmj/sequence/8tmj_raw.pdb | sabdab_dataset/8tmj/sequence/8tmj_F_VH.fa | sabdab_dataset/8tmj/sequence/8tmj_G_VL.fa | sabdab_dataset/8tmj/structure/8tmj.pdb | sabdab_dataset/8tmj/structure/chothia/8tmj.pdb | false | false | train |
8tmj | H | L | 0 | D | C | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of CorA in complex with conformation-specific synthetic antibody C18 and 100 uM MgCl2, State MG0.1-2D | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmj/abangle/8tmj.abangle | sabdab_dataset/8tmj/annotation/8tmj_H_VH.ann | sabdab_dataset/8tmj/annotation/8tmj_L_VL.ann | sabdab_dataset/8tmj/imgt/8tmj_H_H.ann | sabdab_dataset/8tmj/imgt/8tmj_L_L.ann | sabdab_dataset/8tmj/sequence/8tmj_raw.pdb | sabdab_dataset/8tmj/sequence/8tmj_H_VH.fa | sabdab_dataset/8tmj/sequence/8tmj_L_VL.fa | sabdab_dataset/8tmj/structure/8tmj.pdb | sabdab_dataset/8tmj/structure/chothia/8tmj.pdb | false | false | train |
8tmk | F | G | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of magnesium depleted CorA in complex with conformation-specific synthetic antibody C18, State MGD-2C | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmk/abangle/8tmk.abangle | sabdab_dataset/8tmk/annotation/8tmk_F_VH.ann | sabdab_dataset/8tmk/annotation/8tmk_G_VL.ann | sabdab_dataset/8tmk/imgt/8tmk_F_H.ann | sabdab_dataset/8tmk/imgt/8tmk_G_L.ann | sabdab_dataset/8tmk/sequence/8tmk_raw.pdb | sabdab_dataset/8tmk/sequence/8tmk_F_VH.fa | sabdab_dataset/8tmk/sequence/8tmk_G_VL.fa | sabdab_dataset/8tmk/structure/8tmk.pdb | sabdab_dataset/8tmk/structure/chothia/8tmk.pdb | false | false | train |
8tmk | H | L | 0 | D | C | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of magnesium depleted CorA in complex with conformation-specific synthetic antibody C18, State MGD-2C | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmk/abangle/8tmk.abangle | sabdab_dataset/8tmk/annotation/8tmk_H_VH.ann | sabdab_dataset/8tmk/annotation/8tmk_L_VL.ann | sabdab_dataset/8tmk/imgt/8tmk_H_H.ann | sabdab_dataset/8tmk/imgt/8tmk_L_L.ann | sabdab_dataset/8tmk/sequence/8tmk_raw.pdb | sabdab_dataset/8tmk/sequence/8tmk_H_VH.fa | sabdab_dataset/8tmk/sequence/8tmk_L_VL.fa | sabdab_dataset/8tmk/structure/8tmk.pdb | sabdab_dataset/8tmk/structure/chothia/8tmk.pdb | false | false | train |
8tml | F | G | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of magnesium depleted CorA in complex with conformation-specific synthetic antibody C18, State MGD-2B | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tml/abangle/8tml.abangle | sabdab_dataset/8tml/annotation/8tml_F_VH.ann | sabdab_dataset/8tml/annotation/8tml_G_VL.ann | sabdab_dataset/8tml/imgt/8tml_F_H.ann | sabdab_dataset/8tml/imgt/8tml_G_L.ann | sabdab_dataset/8tml/sequence/8tml_raw.pdb | sabdab_dataset/8tml/sequence/8tml_F_VH.fa | sabdab_dataset/8tml/sequence/8tml_G_VL.fa | sabdab_dataset/8tml/structure/8tml.pdb | sabdab_dataset/8tml/structure/chothia/8tml.pdb | false | false | train |
8tml | H | L | 0 | D | C | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of magnesium depleted CorA in complex with conformation-specific synthetic antibody C18, State MGD-2B | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tml/abangle/8tml.abangle | sabdab_dataset/8tml/annotation/8tml_H_VH.ann | sabdab_dataset/8tml/annotation/8tml_L_VL.ann | sabdab_dataset/8tml/imgt/8tml_H_H.ann | sabdab_dataset/8tml/imgt/8tml_L_L.ann | sabdab_dataset/8tml/sequence/8tml_raw.pdb | sabdab_dataset/8tml/sequence/8tml_H_VH.fa | sabdab_dataset/8tml/sequence/8tml_L_VL.fa | sabdab_dataset/8tml/structure/8tml.pdb | sabdab_dataset/8tml/structure/chothia/8tml.pdb | false | false | validation |
8tmm | F | G | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of magnesium depleted CorA in complex with conformation-specific synthetic antibody C18, State MGD-2A | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmm/abangle/8tmm.abangle | sabdab_dataset/8tmm/annotation/8tmm_F_VH.ann | sabdab_dataset/8tmm/annotation/8tmm_G_VL.ann | sabdab_dataset/8tmm/imgt/8tmm_F_H.ann | sabdab_dataset/8tmm/imgt/8tmm_G_L.ann | sabdab_dataset/8tmm/sequence/8tmm_raw.pdb | sabdab_dataset/8tmm/sequence/8tmm_F_VH.fa | sabdab_dataset/8tmm/sequence/8tmm_G_VL.fa | sabdab_dataset/8tmm/structure/8tmm.pdb | sabdab_dataset/8tmm/structure/chothia/8tmm.pdb | false | false | train |
8tmm | H | L | 0 | D | C | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of magnesium depleted CorA in complex with conformation-specific synthetic antibody C18, State MGD-2A | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmm/abangle/8tmm.abangle | sabdab_dataset/8tmm/annotation/8tmm_H_VH.ann | sabdab_dataset/8tmm/annotation/8tmm_L_VL.ann | sabdab_dataset/8tmm/imgt/8tmm_H_H.ann | sabdab_dataset/8tmm/imgt/8tmm_L_L.ann | sabdab_dataset/8tmm/sequence/8tmm_raw.pdb | sabdab_dataset/8tmm/sequence/8tmm_H_VH.fa | sabdab_dataset/8tmm/sequence/8tmm_L_VL.fa | sabdab_dataset/8tmm/structure/8tmm.pdb | sabdab_dataset/8tmm/structure/chothia/8tmm.pdb | false | false | train |
8tmn | H | L | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of magnesium depleted CorA in complex with conformation-specific synthetic antibody C18, State MGD-1D | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmn/abangle/8tmn.abangle | sabdab_dataset/8tmn/annotation/8tmn_H_VH.ann | sabdab_dataset/8tmn/annotation/8tmn_L_VL.ann | sabdab_dataset/8tmn/imgt/8tmn_H_H.ann | sabdab_dataset/8tmn/imgt/8tmn_L_L.ann | sabdab_dataset/8tmn/sequence/8tmn_raw.pdb | sabdab_dataset/8tmn/sequence/8tmn_H_VH.fa | sabdab_dataset/8tmn/sequence/8tmn_L_VL.fa | sabdab_dataset/8tmn/structure/8tmn.pdb | sabdab_dataset/8tmn/structure/chothia/8tmn.pdb | false | false | train |
8tmo | H | L | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of magnesium depleted CorA in complex with conformation-specific synthetic antibody C18, State MGD-1C | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmo/abangle/8tmo.abangle | sabdab_dataset/8tmo/annotation/8tmo_H_VH.ann | sabdab_dataset/8tmo/annotation/8tmo_L_VL.ann | sabdab_dataset/8tmo/imgt/8tmo_H_H.ann | sabdab_dataset/8tmo/imgt/8tmo_L_L.ann | sabdab_dataset/8tmo/sequence/8tmo_raw.pdb | sabdab_dataset/8tmo/sequence/8tmo_H_VH.fa | sabdab_dataset/8tmo/sequence/8tmo_L_VL.fa | sabdab_dataset/8tmo/structure/8tmo.pdb | sabdab_dataset/8tmo/structure/chothia/8tmo.pdb | false | false | train |
8tmp | H | L | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of magnesium depleted CorA in complex with conformation-specific synthetic antibody C18, State MGD-1B | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmp/abangle/8tmp.abangle | sabdab_dataset/8tmp/annotation/8tmp_H_VH.ann | sabdab_dataset/8tmp/annotation/8tmp_L_VL.ann | sabdab_dataset/8tmp/imgt/8tmp_H_H.ann | sabdab_dataset/8tmp/imgt/8tmp_L_L.ann | sabdab_dataset/8tmp/sequence/8tmp_raw.pdb | sabdab_dataset/8tmp/sequence/8tmp_H_VH.fa | sabdab_dataset/8tmp/sequence/8tmp_L_VL.fa | sabdab_dataset/8tmp/structure/8tmp.pdb | sabdab_dataset/8tmp/structure/chothia/8tmp.pdb | false | false | train |
8tmq | H | L | 0 | B | A | protein | protein | NA | NA | cobalt/magnesium transport protein cora | cobalt/magnesium transport protein cora | MEMBRANE PROTEIN | 02/12/25 | Cryo-EM structure of magnesium depleted CorA in complex with conformation-specific synthetic antibody C18, State MGD-1A | Homo sapiens; Thermotoga maritima | homo sapiens | homo sapiens | thermotoga maritima | thermotoga maritima | Erramilli, S.K., Perozo, E., Kossiakoff, A.A. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmq/abangle/8tmq.abangle | sabdab_dataset/8tmq/annotation/8tmq_H_VH.ann | sabdab_dataset/8tmq/annotation/8tmq_L_VL.ann | sabdab_dataset/8tmq/imgt/8tmq_H_H.ann | sabdab_dataset/8tmq/imgt/8tmq_L_L.ann | sabdab_dataset/8tmq/sequence/8tmq_raw.pdb | sabdab_dataset/8tmq/sequence/8tmq_H_VH.fa | sabdab_dataset/8tmq/sequence/8tmq_L_VL.fa | sabdab_dataset/8tmq/structure/8tmq.pdb | sabdab_dataset/8tmq/structure/chothia/8tmq.pdb | false | false | train |
8tmy | A | B | 0 | M | peptide | null | stem helix peptide of spike protein s2' | VIRAL PROTEIN/IMMUNE SYSTEM | 07/31/24 | Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody CHM-16 | Macaca mulatta; SYNTHETIC CONSTRUCT | macaca mulatta | macaca mulatta | severe acute respiratory syndrome coronavirus2 | Feng, Z., Wilson, I.A. | 3.07 | X-RAY DIFFRACTION | 0.286 | 0.243 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmy/abangle/8tmy.abangle | sabdab_dataset/8tmy/annotation/8tmy_A_VH.ann | sabdab_dataset/8tmy/annotation/8tmy_B_VL.ann | sabdab_dataset/8tmy/imgt/8tmy_A_H.ann | sabdab_dataset/8tmy/imgt/8tmy_B_L.ann | sabdab_dataset/8tmy/sequence/8tmy_raw.pdb | sabdab_dataset/8tmy/sequence/8tmy_A_VH.fa | sabdab_dataset/8tmy/sequence/8tmy_B_VL.fa | sabdab_dataset/8tmy/structure/8tmy.pdb | sabdab_dataset/8tmy/structure/chothia/8tmy.pdb | true | false | validation |
8tmy | C | D | 0 | N | peptide | null | stem helix peptide of spike protein s2' | VIRAL PROTEIN/IMMUNE SYSTEM | 07/31/24 | Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody CHM-16 | Macaca mulatta; SYNTHETIC CONSTRUCT | macaca mulatta | macaca mulatta | severe acute respiratory syndrome coronavirus2 | Feng, Z., Wilson, I.A. | 3.07 | X-RAY DIFFRACTION | 0.286 | 0.243 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmy/abangle/8tmy.abangle | sabdab_dataset/8tmy/annotation/8tmy_C_VH.ann | sabdab_dataset/8tmy/annotation/8tmy_D_VL.ann | sabdab_dataset/8tmy/imgt/8tmy_C_H.ann | sabdab_dataset/8tmy/imgt/8tmy_D_L.ann | sabdab_dataset/8tmy/sequence/8tmy_raw.pdb | sabdab_dataset/8tmy/sequence/8tmy_C_VH.fa | sabdab_dataset/8tmy/sequence/8tmy_D_VL.fa | sabdab_dataset/8tmy/structure/8tmy.pdb | sabdab_dataset/8tmy/structure/chothia/8tmy.pdb | true | false | train |
8tmy | H | L | 0 | S | peptide | null | stem helix peptide of spike protein s2' | VIRAL PROTEIN/IMMUNE SYSTEM | 07/31/24 | Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody CHM-16 | Macaca mulatta; SYNTHETIC CONSTRUCT | macaca mulatta | macaca mulatta | severe acute respiratory syndrome coronavirus2 | Feng, Z., Wilson, I.A. | 3.07 | X-RAY DIFFRACTION | 0.286 | 0.243 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tmy/abangle/8tmy.abangle | sabdab_dataset/8tmy/annotation/8tmy_H_VH.ann | sabdab_dataset/8tmy/annotation/8tmy_L_VL.ann | sabdab_dataset/8tmy/imgt/8tmy_H_H.ann | sabdab_dataset/8tmy/imgt/8tmy_L_L.ann | sabdab_dataset/8tmy/sequence/8tmy_raw.pdb | sabdab_dataset/8tmy/sequence/8tmy_H_VH.fa | sabdab_dataset/8tmy/sequence/8tmy_L_VL.fa | sabdab_dataset/8tmy/structure/8tmy.pdb | sabdab_dataset/8tmy/structure/chothia/8tmy.pdb | true | false | train |
8tmz | H | L | 0 | A | peptide | null | stem helix peptide of spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 07/31/24 | Crystal structure of MERS-CoV spike stem helix peptide in complex with neutralizing antibody CHM-27 | Macaca mulatta; SYNTHETIC CONSTRUCT | macaca mulatta | macaca mulatta | middle east respiratory syndrome-relatedcoronavirus | Yuan, M., Wilson, I.A. | 1.8 | X-RAY DIFFRACTION | 0.294 | 0.245 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8tmz/abangle/8tmz.abangle | sabdab_dataset/8tmz/annotation/8tmz_H_VH.ann | sabdab_dataset/8tmz/annotation/8tmz_L_VL.ann | sabdab_dataset/8tmz/imgt/8tmz_H_H.ann | sabdab_dataset/8tmz/imgt/8tmz_L_L.ann | sabdab_dataset/8tmz/sequence/8tmz_raw.pdb | sabdab_dataset/8tmz/sequence/8tmz_H_VH.fa | sabdab_dataset/8tmz/sequence/8tmz_L_VL.fa | sabdab_dataset/8tmz/structure/8tmz.pdb | sabdab_dataset/8tmz/structure/chothia/8tmz.pdb | true | false | validation |
8tn4 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/04/24 | The Crystal Structure of a human monoclonal antibody (aAb), termed TG10, used to study poly-N-acetyl-glucosamine broadly expressed in biofilm-forming pathogenclonal antibody | Homo sapiens | homo sapiens | homo sapiens | null | Li, M., Wlodawer, A., Temme, S., Gildersleeve, J. | 1.4 | X-RAY DIFFRACTION | 0.170 | 0.135 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8tn4/abangle/8tn4.abangle | sabdab_dataset/8tn4/annotation/8tn4_H_VH.ann | sabdab_dataset/8tn4/annotation/8tn4_L_VL.ann | sabdab_dataset/8tn4/imgt/8tn4_H_H.ann | sabdab_dataset/8tn4/imgt/8tn4_L_L.ann | sabdab_dataset/8tn4/sequence/8tn4_raw.pdb | sabdab_dataset/8tn4/sequence/8tn4_H_VH.fa | sabdab_dataset/8tn4/sequence/8tn4_L_VL.fa | sabdab_dataset/8tn4/structure/8tn4.pdb | sabdab_dataset/8tn4/structure/chothia/8tn4.pdb | true | false | validation |
8tn5 | H | L | 0 | L | carbohydrate | GCS | D-GLUCOSAMINE | IMMUNE SYSTEM | 12/04/24 | The Crystal Structure of a human monoclonal antibody (aAb), termed TG10, complexed with a GlcNH2 | Homo sapiens | homo sapiens | homo sapiens | homo sapiens | Li, M., Wlodawer, A., Temme, S., Gildersleeve, J. | 1.76 | X-RAY DIFFRACTION | 0.206 | 0.164 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8tn5/abangle/8tn5.abangle | sabdab_dataset/8tn5/annotation/8tn5_H_VH.ann | sabdab_dataset/8tn5/annotation/8tn5_L_VL.ann | sabdab_dataset/8tn5/imgt/8tn5_H_H.ann | sabdab_dataset/8tn5/imgt/8tn5_L_L.ann | sabdab_dataset/8tn5/sequence/8tn5_raw.pdb | sabdab_dataset/8tn5/sequence/8tn5_H_VH.fa | sabdab_dataset/8tn5/sequence/8tn5_L_VL.fa | sabdab_dataset/8tn5/structure/8tn5.pdb | sabdab_dataset/8tn5/structure/chothia/8tn5.pdb | true | false | test |
8tn7 | H | L | 0 | A | carbohydrate | GCS | D-GLUCOSAMINE | IMMUNE SYSTEM | 12/04/24 | The Crystal Structure of a human monoclonal antibody (aAb), termed TG10, complexed with a disaccharide | Homo sapiens | homo sapiens | homo sapiens | null | Li, M., Wlodawer, A., Temme, S., Gildersleeve, J. | 1.56 | X-RAY DIFFRACTION | 0.199 | 0.17 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8tn7/abangle/8tn7.abangle | sabdab_dataset/8tn7/annotation/8tn7_H_VH.ann | sabdab_dataset/8tn7/annotation/8tn7_L_VL.ann | sabdab_dataset/8tn7/imgt/8tn7_H_H.ann | sabdab_dataset/8tn7/imgt/8tn7_L_L.ann | sabdab_dataset/8tn7/sequence/8tn7_raw.pdb | sabdab_dataset/8tn7/sequence/8tn7_H_VH.fa | sabdab_dataset/8tn7/sequence/8tn7_L_VL.fa | sabdab_dataset/8tn7/structure/8tn7.pdb | sabdab_dataset/8tn7/structure/chothia/8tn7.pdb | false | false | train |
8tng | H | null | 0 | E | protein | null | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/08/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody R27 targeting the CD4-binding site | Human immunodeficiency virus 1; Lama glama | lama glama | null | human immunodeficiency virus 1 | Zhou, T., Kwong, P.D., Xu, J. | 3.58 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8tng/annotation/8tng_H_VH.ann | null | sabdab_dataset/8tng/imgt/8tng_H_H.ann | null | sabdab_dataset/8tng/sequence/8tng_raw.pdb | sabdab_dataset/8tng/sequence/8tng_H_VH.fa | null | sabdab_dataset/8tng/structure/8tng.pdb | sabdab_dataset/8tng/structure/chothia/8tng.pdb | false | false | test |
8tng | I | null | 0 | C | protein | null | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/08/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody R27 targeting the CD4-binding site | Human immunodeficiency virus 1; Lama glama | lama glama | null | human immunodeficiency virus 1 | Zhou, T., Kwong, P.D., Xu, J. | 3.58 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8tng/annotation/8tng_I_VH.ann | null | sabdab_dataset/8tng/imgt/8tng_I_H.ann | null | sabdab_dataset/8tng/sequence/8tng_raw.pdb | sabdab_dataset/8tng/sequence/8tng_I_VH.fa | null | sabdab_dataset/8tng/structure/8tng.pdb | sabdab_dataset/8tng/structure/chothia/8tng.pdb | false | false | train |
8tng | J | null | 0 | A | protein | null | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/08/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody R27 targeting the CD4-binding site | Human immunodeficiency virus 1; Lama glama | lama glama | null | human immunodeficiency virus 1 | Zhou, T., Kwong, P.D., Xu, J. | 3.58 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8tng/annotation/8tng_J_VH.ann | null | sabdab_dataset/8tng/imgt/8tng_J_H.ann | null | sabdab_dataset/8tng/sequence/8tng_raw.pdb | sabdab_dataset/8tng/sequence/8tng_J_VH.fa | null | sabdab_dataset/8tng/structure/8tng.pdb | sabdab_dataset/8tng/structure/chothia/8tng.pdb | false | false | validation |
8tnh | H | null | 0 | C | protein | null | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/08/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody G36 targeting the CD4-binding site | Human immunodeficiency virus 1; Lama glama | lama glama | null | human immunodeficiency virus 1 | Zhou, T., Kwong, P.D., Xu, J. | 3.32 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8tnh/annotation/8tnh_H_VH.ann | null | sabdab_dataset/8tnh/imgt/8tnh_H_H.ann | null | sabdab_dataset/8tnh/sequence/8tnh_raw.pdb | sabdab_dataset/8tnh/sequence/8tnh_H_VH.fa | null | sabdab_dataset/8tnh/structure/8tnh.pdb | sabdab_dataset/8tnh/structure/chothia/8tnh.pdb | false | false | train |
8tnh | I | null | 0 | E | protein | null | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/08/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody G36 targeting the CD4-binding site | Human immunodeficiency virus 1; Lama glama | lama glama | null | human immunodeficiency virus 1 | Zhou, T., Kwong, P.D., Xu, J. | 3.32 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8tnh/annotation/8tnh_I_VH.ann | null | sabdab_dataset/8tnh/imgt/8tnh_I_H.ann | null | sabdab_dataset/8tnh/sequence/8tnh_raw.pdb | sabdab_dataset/8tnh/sequence/8tnh_I_VH.fa | null | sabdab_dataset/8tnh/structure/8tnh.pdb | sabdab_dataset/8tnh/structure/chothia/8tnh.pdb | false | false | train |
8tnh | J | null | 0 | A | protein | null | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/08/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody G36 targeting the CD4-binding site | Human immunodeficiency virus 1; Lama glama | lama glama | null | human immunodeficiency virus 1 | Zhou, T., Kwong, P.D., Xu, J. | 3.32 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8tnh/annotation/8tnh_J_VH.ann | null | sabdab_dataset/8tnh/imgt/8tnh_J_H.ann | null | sabdab_dataset/8tnh/sequence/8tnh_raw.pdb | sabdab_dataset/8tnh/sequence/8tnh_J_VH.fa | null | sabdab_dataset/8tnh/structure/8tnh.pdb | sabdab_dataset/8tnh/structure/chothia/8tnh.pdb | false | false | train |
8tnj | D | C | 0 | A | protein | null | 9mer peptide,beta-2-microglobulin,mhc class i antigenchimera | IMMUNE SYSTEM | 08/14/24 | Cryo-EM structure of HLA-B*73:01 bound to a 9mer peptide and two Fabs | Homo sapiens | homo sapiens | homo sapiens | homo sapiens | Ross, P., Adams, E.J., Lodwick, J., Zhao, M., Slezak, T., Kossiakoff, A. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tnj/abangle/8tnj.abangle | sabdab_dataset/8tnj/annotation/8tnj_D_VH.ann | sabdab_dataset/8tnj/annotation/8tnj_C_VL.ann | sabdab_dataset/8tnj/imgt/8tnj_D_H.ann | sabdab_dataset/8tnj/imgt/8tnj_C_L.ann | sabdab_dataset/8tnj/sequence/8tnj_raw.pdb | sabdab_dataset/8tnj/sequence/8tnj_D_VH.fa | sabdab_dataset/8tnj/sequence/8tnj_C_VL.fa | sabdab_dataset/8tnj/structure/8tnj.pdb | sabdab_dataset/8tnj/structure/chothia/8tnj.pdb | false | false | validation |
8tnj | E | F | 0 | A | protein | null | 9mer peptide,beta-2-microglobulin,mhc class i antigenchimera | IMMUNE SYSTEM | 08/14/24 | Cryo-EM structure of HLA-B*73:01 bound to a 9mer peptide and two Fabs | Homo sapiens | homo sapiens | homo sapiens | homo sapiens | Ross, P., Adams, E.J., Lodwick, J., Zhao, M., Slezak, T., Kossiakoff, A. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tnj/abangle/8tnj.abangle | sabdab_dataset/8tnj/annotation/8tnj_E_VH.ann | sabdab_dataset/8tnj/annotation/8tnj_F_VL.ann | sabdab_dataset/8tnj/imgt/8tnj_E_H.ann | sabdab_dataset/8tnj/imgt/8tnj_F_L.ann | sabdab_dataset/8tnj/sequence/8tnj_raw.pdb | sabdab_dataset/8tnj/sequence/8tnj_E_VH.fa | sabdab_dataset/8tnj/sequence/8tnj_F_VL.fa | sabdab_dataset/8tnj/structure/8tnj.pdb | sabdab_dataset/8tnj/structure/chothia/8tnj.pdb | false | false | validation |
8tnl | A | B | 0 | C | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 05/15/24 | CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK1 | Homo sapiens; Influenza A virus (A/Shanghai/02/2013(H7N9)) | homo sapiens | homo sapiens | influenza a virus (a/shanghai/02/2013(h7n9)) | Morano, N.C., Wu, X., Shapiro, L. | 3.62 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8tnl/abangle/8tnl.abangle | sabdab_dataset/8tnl/annotation/8tnl_A_VH.ann | sabdab_dataset/8tnl/annotation/8tnl_B_VL.ann | sabdab_dataset/8tnl/imgt/8tnl_A_H.ann | sabdab_dataset/8tnl/imgt/8tnl_B_L.ann | sabdab_dataset/8tnl/sequence/8tnl_raw.pdb | sabdab_dataset/8tnl/sequence/8tnl_A_VH.fa | sabdab_dataset/8tnl/sequence/8tnl_B_VL.fa | sabdab_dataset/8tnl/structure/8tnl.pdb | sabdab_dataset/8tnl/structure/chothia/8tnl.pdb | false | false | train |
8tnl | D | E | 0 | K | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 05/15/24 | CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK1 | Homo sapiens; Influenza A virus (A/Shanghai/02/2013(H7N9)) | homo sapiens | homo sapiens | influenza a virus (a/shanghai/02/2013(h7n9)) | Morano, N.C., Wu, X., Shapiro, L. | 3.62 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8tnl/abangle/8tnl.abangle | sabdab_dataset/8tnl/annotation/8tnl_D_VH.ann | sabdab_dataset/8tnl/annotation/8tnl_E_VL.ann | sabdab_dataset/8tnl/imgt/8tnl_D_H.ann | sabdab_dataset/8tnl/imgt/8tnl_E_L.ann | sabdab_dataset/8tnl/sequence/8tnl_raw.pdb | sabdab_dataset/8tnl/sequence/8tnl_D_VH.fa | sabdab_dataset/8tnl/sequence/8tnl_E_VL.fa | sabdab_dataset/8tnl/structure/8tnl.pdb | sabdab_dataset/8tnl/structure/chothia/8tnl.pdb | false | false | train |
8tnl | H | L | 0 | I | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 05/15/24 | CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK1 | Homo sapiens; Influenza A virus (A/Shanghai/02/2013(H7N9)) | homo sapiens | homo sapiens | influenza a virus (a/shanghai/02/2013(h7n9)) | Morano, N.C., Wu, X., Shapiro, L. | 3.62 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8tnl/abangle/8tnl.abangle | sabdab_dataset/8tnl/annotation/8tnl_H_VH.ann | sabdab_dataset/8tnl/annotation/8tnl_L_VL.ann | sabdab_dataset/8tnl/imgt/8tnl_H_H.ann | sabdab_dataset/8tnl/imgt/8tnl_L_L.ann | sabdab_dataset/8tnl/sequence/8tnl_raw.pdb | sabdab_dataset/8tnl/sequence/8tnl_H_VH.fa | sabdab_dataset/8tnl/sequence/8tnl_L_VL.fa | sabdab_dataset/8tnl/structure/8tnl.pdb | sabdab_dataset/8tnl/structure/chothia/8tnl.pdb | false | false | train |
8tnn | H | G | 0 | C | protein | null | glycoprotein 42 | IMMUNE SYSTEM | 03/27/24 | Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with gp42 antibody A10 | Human gammaherpesvirus 4; Macaca fascicularis | macaca fascicularis | macaca fascicularis | human gammaherpesvirus 4 | Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I. | 3.36 | X-RAY DIFFRACTION | 0.281 | 0.234 | false | true | IGHV6 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8tnn/abangle/8tnn.abangle | sabdab_dataset/8tnn/annotation/8tnn_H_VH.ann | sabdab_dataset/8tnn/annotation/8tnn_G_VL.ann | sabdab_dataset/8tnn/imgt/8tnn_H_H.ann | sabdab_dataset/8tnn/imgt/8tnn_G_L.ann | sabdab_dataset/8tnn/sequence/8tnn_raw.pdb | sabdab_dataset/8tnn/sequence/8tnn_H_VH.fa | sabdab_dataset/8tnn/sequence/8tnn_G_VL.fa | sabdab_dataset/8tnn/structure/8tnn.pdb | sabdab_dataset/8tnn/structure/chothia/8tnn.pdb | true | false | train |
8tnn | J | I | 0 | F | protein | null | glycoprotein 42 | IMMUNE SYSTEM | 03/27/24 | Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with gp42 antibody A10 | Human gammaherpesvirus 4; Macaca fascicularis | macaca fascicularis | macaca fascicularis | human gammaherpesvirus 4 | Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I. | 3.36 | X-RAY DIFFRACTION | 0.281 | 0.234 | false | true | IGHV6 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8tnn/abangle/8tnn.abangle | sabdab_dataset/8tnn/annotation/8tnn_J_VH.ann | sabdab_dataset/8tnn/annotation/8tnn_I_VL.ann | sabdab_dataset/8tnn/imgt/8tnn_J_H.ann | sabdab_dataset/8tnn/imgt/8tnn_I_L.ann | sabdab_dataset/8tnn/sequence/8tnn_raw.pdb | sabdab_dataset/8tnn/sequence/8tnn_J_VH.fa | sabdab_dataset/8tnn/sequence/8tnn_I_VL.fa | sabdab_dataset/8tnn/structure/8tnn.pdb | sabdab_dataset/8tnn/structure/chothia/8tnn.pdb | true | false | test |
8tnt | E | D | 0 | A | B | protein | protein | NA | NA | envelope glycoprotein h | envelope glycoprotein l | IMMUNE SYSTEM | 03/27/24 | Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with antibodies F-2-1 and 769C2 | Epstein-Barr virus; Homo sapiens; Mus musculus | homo sapiens | homo sapiens | epstein-barr virus | epstein-barr virus | Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I. | 3.15 | X-RAY DIFFRACTION | 0.287 | 0.255 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/8tnt/abangle/8tnt.abangle | sabdab_dataset/8tnt/annotation/8tnt_E_VH.ann | sabdab_dataset/8tnt/annotation/8tnt_D_VL.ann | sabdab_dataset/8tnt/imgt/8tnt_E_H.ann | sabdab_dataset/8tnt/imgt/8tnt_D_L.ann | sabdab_dataset/8tnt/sequence/8tnt_raw.pdb | sabdab_dataset/8tnt/sequence/8tnt_E_VH.fa | sabdab_dataset/8tnt/sequence/8tnt_D_VL.fa | sabdab_dataset/8tnt/structure/8tnt.pdb | sabdab_dataset/8tnt/structure/chothia/8tnt.pdb | true | false | train |
8tnt | G | F | 0 | C | protein | null | glycoprotein 42 | IMMUNE SYSTEM | 03/27/24 | Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with antibodies F-2-1 and 769C2 | Epstein-Barr virus; Homo sapiens; Mus musculus | mus musculus | mus musculus | epstein-barr virus | Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I. | 3.15 | X-RAY DIFFRACTION | 0.287 | 0.255 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8tnt/abangle/8tnt.abangle | sabdab_dataset/8tnt/annotation/8tnt_G_VH.ann | sabdab_dataset/8tnt/annotation/8tnt_F_VL.ann | sabdab_dataset/8tnt/imgt/8tnt_G_H.ann | sabdab_dataset/8tnt/imgt/8tnt_F_L.ann | sabdab_dataset/8tnt/sequence/8tnt_raw.pdb | sabdab_dataset/8tnt/sequence/8tnt_G_VH.fa | sabdab_dataset/8tnt/sequence/8tnt_F_VL.fa | sabdab_dataset/8tnt/structure/8tnt.pdb | sabdab_dataset/8tnt/structure/chothia/8tnt.pdb | true | false | train |
8tnu | B | C | 0 | Z | G | protein | protein | NA | NA | transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of TRNM-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Roark, R.S., Morano, N.C., Shapiro, L.S., Kwong, P.D. | 3.36 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tnu/abangle/8tnu.abangle | sabdab_dataset/8tnu/annotation/8tnu_B_VH.ann | sabdab_dataset/8tnu/annotation/8tnu_C_VL.ann | sabdab_dataset/8tnu/imgt/8tnu_B_H.ann | sabdab_dataset/8tnu/imgt/8tnu_C_L.ann | sabdab_dataset/8tnu/sequence/8tnu_raw.pdb | sabdab_dataset/8tnu/sequence/8tnu_B_VH.fa | sabdab_dataset/8tnu/sequence/8tnu_C_VL.fa | sabdab_dataset/8tnu/structure/8tnu.pdb | sabdab_dataset/8tnu/structure/chothia/8tnu.pdb | false | false | train |
8tnu | H | L | 0 | Y | E | protein | protein | NA | NA | transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of TRNM-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Roark, R.S., Morano, N.C., Shapiro, L.S., Kwong, P.D. | 3.36 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tnu/abangle/8tnu.abangle | sabdab_dataset/8tnu/annotation/8tnu_H_VH.ann | sabdab_dataset/8tnu/annotation/8tnu_L_VL.ann | sabdab_dataset/8tnu/imgt/8tnu_H_H.ann | sabdab_dataset/8tnu/imgt/8tnu_L_L.ann | sabdab_dataset/8tnu/sequence/8tnu_raw.pdb | sabdab_dataset/8tnu/sequence/8tnu_H_VH.fa | sabdab_dataset/8tnu/sequence/8tnu_L_VL.fa | sabdab_dataset/8tnu/structure/8tnu.pdb | sabdab_dataset/8tnu/structure/chothia/8tnu.pdb | false | false | train |
8tnu | J | K | 0 | X | F | protein | protein | NA | NA | transmembrane protein gp41 | bg505 ds-sosip surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of TRNM-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Roark, R.S., Morano, N.C., Shapiro, L.S., Kwong, P.D. | 3.36 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8tnu/abangle/8tnu.abangle | sabdab_dataset/8tnu/annotation/8tnu_J_VH.ann | sabdab_dataset/8tnu/annotation/8tnu_K_VL.ann | sabdab_dataset/8tnu/imgt/8tnu_J_H.ann | sabdab_dataset/8tnu/imgt/8tnu_K_L.ann | sabdab_dataset/8tnu/sequence/8tnu_raw.pdb | sabdab_dataset/8tnu/sequence/8tnu_J_VH.fa | sabdab_dataset/8tnu/sequence/8tnu_K_VL.fa | sabdab_dataset/8tnu/structure/8tnu.pdb | sabdab_dataset/8tnu/structure/chothia/8tnu.pdb | false | false | train |
8to7 | G | J | 0 | A | D | protein | protein | NA | NA | transmembrane protein gp41 | surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Roark, R.S., Hoyt, F., Hansen, B., Fischer, E., Shapiro, L.S., Kwong, P.D. | 3.39 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8to7/abangle/8to7.abangle | sabdab_dataset/8to7/annotation/8to7_G_VH.ann | sabdab_dataset/8to7/annotation/8to7_J_VL.ann | sabdab_dataset/8to7/imgt/8to7_G_H.ann | sabdab_dataset/8to7/imgt/8to7_J_L.ann | sabdab_dataset/8to7/sequence/8to7_raw.pdb | sabdab_dataset/8to7/sequence/8to7_G_VH.fa | sabdab_dataset/8to7/sequence/8to7_J_VL.fa | sabdab_dataset/8to7/structure/8to7.pdb | sabdab_dataset/8to7/structure/chothia/8to7.pdb | false | false | train |
8to7 | H | L | 0 | B | E | protein | protein | NA | NA | transmembrane protein gp41 | surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Roark, R.S., Hoyt, F., Hansen, B., Fischer, E., Shapiro, L.S., Kwong, P.D. | 3.39 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8to7/abangle/8to7.abangle | sabdab_dataset/8to7/annotation/8to7_H_VH.ann | sabdab_dataset/8to7/annotation/8to7_L_VL.ann | sabdab_dataset/8to7/imgt/8to7_H_H.ann | sabdab_dataset/8to7/imgt/8to7_L_L.ann | sabdab_dataset/8to7/sequence/8to7_raw.pdb | sabdab_dataset/8to7/sequence/8to7_H_VH.fa | sabdab_dataset/8to7/sequence/8to7_L_VL.fa | sabdab_dataset/8to7/structure/8to7.pdb | sabdab_dataset/8to7/structure/chothia/8to7.pdb | false | false | train |
8to7 | I | K | 0 | C | F | protein | protein | NA | NA | transmembrane protein gp41 | surface protein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Roark, R.S., Hoyt, F., Hansen, B., Fischer, E., Shapiro, L.S., Kwong, P.D. | 3.39 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8to7/abangle/8to7.abangle | sabdab_dataset/8to7/annotation/8to7_I_VH.ann | sabdab_dataset/8to7/annotation/8to7_K_VL.ann | sabdab_dataset/8to7/imgt/8to7_I_H.ann | sabdab_dataset/8to7/imgt/8to7_K_L.ann | sabdab_dataset/8to7/sequence/8to7_raw.pdb | sabdab_dataset/8to7/sequence/8to7_I_VH.fa | sabdab_dataset/8to7/sequence/8to7_K_VL.fa | sabdab_dataset/8to7/structure/8to7.pdb | sabdab_dataset/8to7/structure/chothia/8to7.pdb | false | false | train |
8to9 | D | F | 0 | A | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of TRNM-f*01 Fab in complex with HIV-1 Env trimer ConC SOSIP | Homo sapiens; Macaca mulatta | macaca mulatta | macaca mulatta | homo sapiens | Roark, R.S., Morano, N.C., Shapiro, L.S., Kwong, P.D. | 4.03 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8to9/abangle/8to9.abangle | sabdab_dataset/8to9/annotation/8to9_D_VH.ann | sabdab_dataset/8to9/annotation/8to9_F_VL.ann | sabdab_dataset/8to9/imgt/8to9_D_H.ann | sabdab_dataset/8to9/imgt/8to9_F_L.ann | sabdab_dataset/8to9/sequence/8to9_raw.pdb | sabdab_dataset/8to9/sequence/8to9_D_VH.fa | sabdab_dataset/8to9/sequence/8to9_F_VL.fa | sabdab_dataset/8to9/structure/8to9.pdb | sabdab_dataset/8to9/structure/chothia/8to9.pdb | false | false | train |
8to9 | E | G | 0 | B | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of TRNM-f*01 Fab in complex with HIV-1 Env trimer ConC SOSIP | Homo sapiens; Macaca mulatta | macaca mulatta | macaca mulatta | homo sapiens | Roark, R.S., Morano, N.C., Shapiro, L.S., Kwong, P.D. | 4.03 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8to9/abangle/8to9.abangle | sabdab_dataset/8to9/annotation/8to9_E_VH.ann | sabdab_dataset/8to9/annotation/8to9_G_VL.ann | sabdab_dataset/8to9/imgt/8to9_E_H.ann | sabdab_dataset/8to9/imgt/8to9_G_L.ann | sabdab_dataset/8to9/sequence/8to9_raw.pdb | sabdab_dataset/8to9/sequence/8to9_E_VH.fa | sabdab_dataset/8to9/sequence/8to9_G_VL.fa | sabdab_dataset/8to9/structure/8to9.pdb | sabdab_dataset/8to9/structure/chothia/8to9.pdb | false | false | test |
8to9 | H | L | 0 | C | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of TRNM-f*01 Fab in complex with HIV-1 Env trimer ConC SOSIP | Homo sapiens; Macaca mulatta | macaca mulatta | macaca mulatta | homo sapiens | Roark, R.S., Morano, N.C., Shapiro, L.S., Kwong, P.D. | 4.03 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8to9/abangle/8to9.abangle | sabdab_dataset/8to9/annotation/8to9_H_VH.ann | sabdab_dataset/8to9/annotation/8to9_L_VL.ann | sabdab_dataset/8to9/imgt/8to9_H_H.ann | sabdab_dataset/8to9/imgt/8to9_L_L.ann | sabdab_dataset/8to9/sequence/8to9_raw.pdb | sabdab_dataset/8to9/sequence/8to9_H_VH.fa | sabdab_dataset/8to9/sequence/8to9_L_VL.fa | sabdab_dataset/8to9/structure/8to9.pdb | sabdab_dataset/8to9/structure/chothia/8to9.pdb | false | false | train |
8toa | A | B | 0 | I | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 05/15/24 | CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK2 | Homo sapiens; Influenza A virus (A/Shanghai/02/2013(H7N9)) | homo sapiens | homo sapiens | influenza a virus (a/shanghai/02/2013(h7n9)) | Morano, N.C., Becker, J.E., Wu, X., Shapiro, L. | 3.69 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8toa/abangle/8toa.abangle | sabdab_dataset/8toa/annotation/8toa_A_VH.ann | sabdab_dataset/8toa/annotation/8toa_B_VL.ann | sabdab_dataset/8toa/imgt/8toa_A_H.ann | sabdab_dataset/8toa/imgt/8toa_B_L.ann | sabdab_dataset/8toa/sequence/8toa_raw.pdb | sabdab_dataset/8toa/sequence/8toa_A_VH.fa | sabdab_dataset/8toa/sequence/8toa_B_VL.fa | sabdab_dataset/8toa/structure/8toa.pdb | sabdab_dataset/8toa/structure/chothia/8toa.pdb | false | false | train |
8toa | D | E | 0 | K | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 05/15/24 | CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK2 | Homo sapiens; Influenza A virus (A/Shanghai/02/2013(H7N9)) | homo sapiens | homo sapiens | influenza a virus (a/shanghai/02/2013(h7n9)) | Morano, N.C., Becker, J.E., Wu, X., Shapiro, L. | 3.69 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8toa/abangle/8toa.abangle | sabdab_dataset/8toa/annotation/8toa_D_VH.ann | sabdab_dataset/8toa/annotation/8toa_E_VL.ann | sabdab_dataset/8toa/imgt/8toa_D_H.ann | sabdab_dataset/8toa/imgt/8toa_E_L.ann | sabdab_dataset/8toa/sequence/8toa_raw.pdb | sabdab_dataset/8toa/sequence/8toa_D_VH.fa | sabdab_dataset/8toa/sequence/8toa_E_VL.fa | sabdab_dataset/8toa/structure/8toa.pdb | sabdab_dataset/8toa/structure/chothia/8toa.pdb | false | false | train |
8toa | H | L | 0 | C | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 05/15/24 | CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK2 | Homo sapiens; Influenza A virus (A/Shanghai/02/2013(H7N9)) | homo sapiens | homo sapiens | influenza a virus (a/shanghai/02/2013(h7n9)) | Morano, N.C., Becker, J.E., Wu, X., Shapiro, L. | 3.69 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8toa/abangle/8toa.abangle | sabdab_dataset/8toa/annotation/8toa_H_VH.ann | sabdab_dataset/8toa/annotation/8toa_L_VL.ann | sabdab_dataset/8toa/imgt/8toa_H_H.ann | sabdab_dataset/8toa/imgt/8toa_L_L.ann | sabdab_dataset/8toa/sequence/8toa_raw.pdb | sabdab_dataset/8toa/sequence/8toa_H_VH.fa | sabdab_dataset/8toa/sequence/8toa_L_VL.fa | sabdab_dataset/8toa/structure/8toa.pdb | sabdab_dataset/8toa/structure/chothia/8toa.pdb | false | false | train |
8too | B | A | 0 | I | protein | null | glycoprotein 42 | IMMUNE SYSTEM | 03/27/24 | Crystal structure of Epstein-Barr virus gp42 in complex with antibody 4C12 | Epstein-Barr virus; Mus musculus | mus musculus | mus musculus | epstein-barr virus | Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I. | 2.6 | X-RAY DIFFRACTION | 0.275 | 0.226 | false | true | IGHV1 | IGKV10 | Kappa | null | null | null | null | null | sabdab_dataset/8too/abangle/8too.abangle | sabdab_dataset/8too/annotation/8too_B_VH.ann | sabdab_dataset/8too/annotation/8too_A_VL.ann | sabdab_dataset/8too/imgt/8too_B_H.ann | sabdab_dataset/8too/imgt/8too_A_L.ann | sabdab_dataset/8too/sequence/8too_raw.pdb | sabdab_dataset/8too/sequence/8too_B_VH.fa | sabdab_dataset/8too/sequence/8too_A_VL.fa | sabdab_dataset/8too/structure/8too.pdb | sabdab_dataset/8too/structure/chothia/8too.pdb | true | false | train |
8too | D | C | 0 | J | protein | null | glycoprotein 42 | IMMUNE SYSTEM | 03/27/24 | Crystal structure of Epstein-Barr virus gp42 in complex with antibody 4C12 | Epstein-Barr virus; Mus musculus | mus musculus | mus musculus | epstein-barr virus | Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I. | 2.6 | X-RAY DIFFRACTION | 0.275 | 0.226 | false | true | IGHV1 | IGKV10 | Kappa | null | null | null | null | null | sabdab_dataset/8too/abangle/8too.abangle | sabdab_dataset/8too/annotation/8too_D_VH.ann | sabdab_dataset/8too/annotation/8too_C_VL.ann | sabdab_dataset/8too/imgt/8too_D_H.ann | sabdab_dataset/8too/imgt/8too_C_L.ann | sabdab_dataset/8too/sequence/8too_raw.pdb | sabdab_dataset/8too/sequence/8too_D_VH.fa | sabdab_dataset/8too/sequence/8too_C_VL.fa | sabdab_dataset/8too/structure/8too.pdb | sabdab_dataset/8too/structure/chothia/8too.pdb | true | false | train |
8too | G | F | 0 | K | protein | null | glycoprotein 42 | IMMUNE SYSTEM | 03/27/24 | Crystal structure of Epstein-Barr virus gp42 in complex with antibody 4C12 | Epstein-Barr virus; Mus musculus | mus musculus | mus musculus | epstein-barr virus | Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I. | 2.6 | X-RAY DIFFRACTION | 0.275 | 0.226 | false | true | IGHV1 | IGKV10 | Kappa | null | null | null | null | null | sabdab_dataset/8too/abangle/8too.abangle | sabdab_dataset/8too/annotation/8too_G_VH.ann | sabdab_dataset/8too/annotation/8too_F_VL.ann | sabdab_dataset/8too/imgt/8too_G_H.ann | sabdab_dataset/8too/imgt/8too_F_L.ann | sabdab_dataset/8too/sequence/8too_raw.pdb | sabdab_dataset/8too/sequence/8too_G_VH.fa | sabdab_dataset/8too/sequence/8too_F_VL.fa | sabdab_dataset/8too/structure/8too.pdb | sabdab_dataset/8too/structure/chothia/8too.pdb | true | false | train |
8too | H | E | 0 | L | protein | null | glycoprotein 42 | IMMUNE SYSTEM | 03/27/24 | Crystal structure of Epstein-Barr virus gp42 in complex with antibody 4C12 | Epstein-Barr virus; Mus musculus | mus musculus | mus musculus | epstein-barr virus | Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I. | 2.6 | X-RAY DIFFRACTION | 0.275 | 0.226 | false | true | IGHV1 | IGKV10 | Kappa | null | null | null | null | null | sabdab_dataset/8too/abangle/8too.abangle | sabdab_dataset/8too/annotation/8too_H_VH.ann | sabdab_dataset/8too/annotation/8too_E_VL.ann | sabdab_dataset/8too/imgt/8too_H_H.ann | sabdab_dataset/8too/imgt/8too_E_L.ann | sabdab_dataset/8too/sequence/8too_raw.pdb | sabdab_dataset/8too/sequence/8too_H_VH.fa | sabdab_dataset/8too/sequence/8too_E_VL.fa | sabdab_dataset/8too/structure/8too.pdb | sabdab_dataset/8too/structure/chothia/8too.pdb | true | false | train |
8top | H | L | 0 | B | A | protein | protein | NA | NA | hiv-1 bg505 ds-sosip glycoprotein gp41 | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Zhou, T., Morano, N.C., Roark, R.S., Kwong, P.D. | 3.52 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8top/abangle/8top.abangle | sabdab_dataset/8top/annotation/8top_H_VH.ann | sabdab_dataset/8top/annotation/8top_L_VL.ann | sabdab_dataset/8top/imgt/8top_H_H.ann | sabdab_dataset/8top/imgt/8top_L_L.ann | sabdab_dataset/8top/sequence/8top_raw.pdb | sabdab_dataset/8top/sequence/8top_H_VH.fa | sabdab_dataset/8top/sequence/8top_L_VL.fa | sabdab_dataset/8top/structure/8top.pdb | sabdab_dataset/8top/structure/chothia/8top.pdb | false | false | validation |
8top | J | K | 0 | D | C | protein | protein | NA | NA | hiv-1 bg505 ds-sosip glycoprotein gp41 | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Zhou, T., Morano, N.C., Roark, R.S., Kwong, P.D. | 3.52 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8top/abangle/8top.abangle | sabdab_dataset/8top/annotation/8top_J_VH.ann | sabdab_dataset/8top/annotation/8top_K_VL.ann | sabdab_dataset/8top/imgt/8top_J_H.ann | sabdab_dataset/8top/imgt/8top_K_L.ann | sabdab_dataset/8top/sequence/8top_raw.pdb | sabdab_dataset/8top/sequence/8top_J_VH.fa | sabdab_dataset/8top/sequence/8top_K_VL.fa | sabdab_dataset/8top/structure/8top.pdb | sabdab_dataset/8top/structure/chothia/8top.pdb | false | false | validation |
8top | M | N | 0 | F | E | protein | protein | NA | NA | hiv-1 bg505 ds-sosip glycoprotein gp41 | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Zhou, T., Morano, N.C., Roark, R.S., Kwong, P.D. | 3.52 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8top/abangle/8top.abangle | sabdab_dataset/8top/annotation/8top_M_VH.ann | sabdab_dataset/8top/annotation/8top_N_VL.ann | sabdab_dataset/8top/imgt/8top_M_H.ann | sabdab_dataset/8top/imgt/8top_N_L.ann | sabdab_dataset/8top/sequence/8top_raw.pdb | sabdab_dataset/8top/sequence/8top_M_VH.fa | sabdab_dataset/8top/sequence/8top_N_VL.fa | sabdab_dataset/8top/structure/8top.pdb | sabdab_dataset/8top/structure/chothia/8top.pdb | false | false | train |
8top | U | V | 0 | P | O | protein | protein | NA | NA | hiv-1 bg505 ds-sosip glycoprotein gp41 | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Zhou, T., Morano, N.C., Roark, R.S., Kwong, P.D. | 3.52 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8top/abangle/8top.abangle | sabdab_dataset/8top/annotation/8top_U_VH.ann | sabdab_dataset/8top/annotation/8top_V_VL.ann | sabdab_dataset/8top/imgt/8top_U_H.ann | sabdab_dataset/8top/imgt/8top_V_L.ann | sabdab_dataset/8top/sequence/8top_raw.pdb | sabdab_dataset/8top/sequence/8top_U_VH.fa | sabdab_dataset/8top/sequence/8top_V_VL.fa | sabdab_dataset/8top/structure/8top.pdb | sabdab_dataset/8top/structure/chothia/8top.pdb | false | false | train |
8top | W | X | 0 | R | Q | protein | protein | NA | NA | hiv-1 bg505 ds-sosip glycoprotein gp41 | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Zhou, T., Morano, N.C., Roark, R.S., Kwong, P.D. | 3.52 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8top/abangle/8top.abangle | sabdab_dataset/8top/annotation/8top_W_VH.ann | sabdab_dataset/8top/annotation/8top_X_VL.ann | sabdab_dataset/8top/imgt/8top_W_H.ann | sabdab_dataset/8top/imgt/8top_X_L.ann | sabdab_dataset/8top/sequence/8top_raw.pdb | sabdab_dataset/8top/sequence/8top_W_VH.fa | sabdab_dataset/8top/sequence/8top_X_VL.fa | sabdab_dataset/8top/structure/8top.pdb | sabdab_dataset/8top/structure/chothia/8top.pdb | false | false | train |
8top | Y | Z | 0 | T | S | protein | protein | NA | NA | hiv-1 bg505 ds-sosip glycoprotein gp41 | hiv-1 bg505 ds-sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/07/24 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Zhou, T., Morano, N.C., Roark, R.S., Kwong, P.D. | 3.52 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8top/abangle/8top.abangle | sabdab_dataset/8top/annotation/8top_Y_VH.ann | sabdab_dataset/8top/annotation/8top_Z_VL.ann | sabdab_dataset/8top/imgt/8top_Y_H.ann | sabdab_dataset/8top/imgt/8top_Z_L.ann | sabdab_dataset/8top/sequence/8top_raw.pdb | sabdab_dataset/8top/sequence/8top_Y_VH.fa | sabdab_dataset/8top/sequence/8top_Z_VL.fa | sabdab_dataset/8top/structure/8top.pdb | sabdab_dataset/8top/structure/chothia/8top.pdb | false | false | train |
8tp2 | H | L | 0 | C | protein | null | hemagglutinin | VIRAL PROTEIN/Immune System | 10/11/23 | H2 hemagglutinin (A/Singapore/1/1957) in complex with RBS-targeting 1-1-1F05 | Homo sapiens | homo sapiens | homo sapiens | homo sapiens | Yang, Y.R., Han, J., Perrett, H.R., Ward, A.B. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8tp2/abangle/8tp2.abangle | sabdab_dataset/8tp2/annotation/8tp2_H_VH.ann | sabdab_dataset/8tp2/annotation/8tp2_L_VL.ann | sabdab_dataset/8tp2/imgt/8tp2_H_H.ann | sabdab_dataset/8tp2/imgt/8tp2_L_L.ann | sabdab_dataset/8tp2/sequence/8tp2_raw.pdb | sabdab_dataset/8tp2/sequence/8tp2_H_VH.fa | sabdab_dataset/8tp2/sequence/8tp2_L_VL.fa | sabdab_dataset/8tp2/structure/8tp2.pdb | sabdab_dataset/8tp2/structure/chothia/8tp2.pdb | false | false | train |
8tp3 | H | L | 0 | C | protein | null | hemagglutinin ha1 chain | VIRAL PROTEIN/Immune System | 10/11/23 | H1 hemagglutinin (NC99) in complex with RBS-targeting Fab 1-1-1F05 | Homo sapiens; Influenza A virus (A/New Caledonia/20/1999(H1N1)) | homo sapiens | homo sapiens | influenza a virus (a/newcaledonia/20/1999(h1n1)) | Yang, Y.R., Han, J., Perrett, H.R., Ward, A.B. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8tp3/abangle/8tp3.abangle | sabdab_dataset/8tp3/annotation/8tp3_H_VH.ann | sabdab_dataset/8tp3/annotation/8tp3_L_VL.ann | sabdab_dataset/8tp3/imgt/8tp3_H_H.ann | sabdab_dataset/8tp3/imgt/8tp3_L_L.ann | sabdab_dataset/8tp3/sequence/8tp3_raw.pdb | sabdab_dataset/8tp3/sequence/8tp3_H_VH.fa | sabdab_dataset/8tp3/sequence/8tp3_L_VL.fa | sabdab_dataset/8tp3/structure/8tp3.pdb | sabdab_dataset/8tp3/structure/chothia/8tp3.pdb | false | false | train |
8tp4 | H | L | 0 | C | protein | null | hemagglutinin | VIRAL PROTEIN/Immune System | 10/11/23 | H2 hemagglutinin (A/Singapore/1/1957) in complex with RBS-targeting Fab 1-1-1E04 | Homo sapiens; Influenza A virus (A/Singapore/1/1957(H2N2)) | homo sapiens | homo sapiens | influenza a virus (a/singapore/1/1957(h2n2)) | Yang, Y.R., Han, J., Perrett, H.R., Ward, A.B. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8tp4/abangle/8tp4.abangle | sabdab_dataset/8tp4/annotation/8tp4_H_VH.ann | sabdab_dataset/8tp4/annotation/8tp4_L_VL.ann | sabdab_dataset/8tp4/imgt/8tp4_H_H.ann | sabdab_dataset/8tp4/imgt/8tp4_L_L.ann | sabdab_dataset/8tp4/sequence/8tp4_raw.pdb | sabdab_dataset/8tp4/sequence/8tp4_H_VH.fa | sabdab_dataset/8tp4/sequence/8tp4_L_VL.fa | sabdab_dataset/8tp4/structure/8tp4.pdb | sabdab_dataset/8tp4/structure/chothia/8tp4.pdb | false | false | train |
8tp5 | E | F | 0 | C | protein | null | hemagglutinin ha1 chain | VIRAL PROTEIN/Immune System | 10/11/23 | H1 hemagglutinin (NC99) in complex with RBS-targeting Fab 1-1-1E04 | Homo sapiens; Influenza A virus (A/New Caledonia/20/1999(H1N1)) | homo sapiens | homo sapiens | influenza a virus (a/newcaledonia/20/1999(h1n1)) | Yang, Y.R., Han, J., Perrett, H.R., Ward, A.B. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8tp5/abangle/8tp5.abangle | sabdab_dataset/8tp5/annotation/8tp5_E_VH.ann | sabdab_dataset/8tp5/annotation/8tp5_F_VL.ann | sabdab_dataset/8tp5/imgt/8tp5_E_H.ann | sabdab_dataset/8tp5/imgt/8tp5_F_L.ann | sabdab_dataset/8tp5/sequence/8tp5_raw.pdb | sabdab_dataset/8tp5/sequence/8tp5_E_VH.fa | sabdab_dataset/8tp5/sequence/8tp5_F_VL.fa | sabdab_dataset/8tp5/structure/8tp5.pdb | sabdab_dataset/8tp5/structure/chothia/8tp5.pdb | false | false | train |
8tp5 | H | L | 0 | A | protein | null | hemagglutinin ha1 chain | VIRAL PROTEIN/Immune System | 10/11/23 | H1 hemagglutinin (NC99) in complex with RBS-targeting Fab 1-1-1E04 | Homo sapiens; Influenza A virus (A/New Caledonia/20/1999(H1N1)) | homo sapiens | homo sapiens | influenza a virus (a/newcaledonia/20/1999(h1n1)) | Yang, Y.R., Han, J., Perrett, H.R., Ward, A.B. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8tp5/abangle/8tp5.abangle | sabdab_dataset/8tp5/annotation/8tp5_H_VH.ann | sabdab_dataset/8tp5/annotation/8tp5_L_VL.ann | sabdab_dataset/8tp5/imgt/8tp5_H_H.ann | sabdab_dataset/8tp5/imgt/8tp5_L_L.ann | sabdab_dataset/8tp5/sequence/8tp5_raw.pdb | sabdab_dataset/8tp5/sequence/8tp5_H_VH.fa | sabdab_dataset/8tp5/sequence/8tp5_L_VL.fa | sabdab_dataset/8tp5/structure/8tp5.pdb | sabdab_dataset/8tp5/structure/chothia/8tp5.pdb | false | false | test |
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