pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
365 values
r_factor
stringclasses
358 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
abangle
stringlengths
40
40
annotation_H
stringlengths
44
44
annotation_L
stringlengths
44
44
imgt_H
stringlengths
37
37
imgt_L
stringlengths
37
37
sequence_raw
stringlengths
41
41
sequence_H
stringlengths
41
41
sequence_L
stringlengths
41
41
structure
stringlengths
38
38
structure_chothia
stringlengths
46
46
in_nr_set
bool
2 classes
curated_quality_dataset
bool
2 classes
split
stringclasses
3 values
9c0u
H
L
0
B | A
protein | protein
NA | NA
hemagglutinin | hemagglutinin
VIRAL PROTEIN/IMMUNE SYSTEM
05/07/25
Crystal structure of chimeric hemagglutinin cH5/1 in complex with broad protective antibody 31.b.09
Homo sapiens; Influenza A virus
homo sapiens
homo sapiens
influenza a virus | influenza a virus
Nguyen, T.K.Y., Zhu, X., Wilson, I.A.
3.59
X-RAY DIFFRACTION
0.344
0.294
false
true
IGHV1
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/9c0u/abangle/9c0u.abangle
sabdab_dataset/9c0u/annotation/9c0u_H_VH.ann
sabdab_dataset/9c0u/annotation/9c0u_L_VL.ann
sabdab_dataset/9c0u/imgt/9c0u_H_H.ann
sabdab_dataset/9c0u/imgt/9c0u_L_L.ann
sabdab_dataset/9c0u/sequence/9c0u_raw.pdb
sabdab_dataset/9c0u/sequence/9c0u_H_VH.fa
sabdab_dataset/9c0u/sequence/9c0u_L_VL.fa
sabdab_dataset/9c0u/structure/9c0u.pdb
sabdab_dataset/9c0u/structure/chothia/9c0u.pdb
true
false
train
9c0v
H
L
0
B | A
protein | protein
NA | NA
hemagglutinin | hemagglutinin
VIRAL PROTEIN/IMMUNE SYSTEM
01/29/25
Crystal structure of chimeric hemagglutinin cH5/1 in complex with broad protective antibody 3E1
Homo sapiens; Influenza A virus
homo sapiens
homo sapiens
influenza a virus | influenza a virus
Nguyen, T.K.Y., Wilson, I.A.
3.5
X-RAY DIFFRACTION
0.321
0.292
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c0v/abangle/9c0v.abangle
sabdab_dataset/9c0v/annotation/9c0v_H_VH.ann
sabdab_dataset/9c0v/annotation/9c0v_L_VL.ann
sabdab_dataset/9c0v/imgt/9c0v_H_H.ann
sabdab_dataset/9c0v/imgt/9c0v_L_L.ann
sabdab_dataset/9c0v/sequence/9c0v_raw.pdb
sabdab_dataset/9c0v/sequence/9c0v_H_VH.fa
sabdab_dataset/9c0v/sequence/9c0v_L_VL.fa
sabdab_dataset/9c0v/structure/9c0v.pdb
sabdab_dataset/9c0v/structure/chothia/9c0v.pdb
true
false
train
9c0x
H
L
0
B | A
protein | protein
NA | NA
hemagglutinin ha2 subunit | hemagglutinin ha1 subunit
VIRAL PROTEIN/IMMUNE SYSTEM
05/07/25
Crystal structure of chimeric hemagglutinin cH11/1 in complex with broad protective antibody 31.b.09
Homo sapiens; Influenza A virus
homo sapiens
homo sapiens
influenza a virus | influenza a virus
Nguyen, T.K.Y., Zhu, X., Wilson, I.A.
4.35
X-RAY DIFFRACTION
0.382
0.335
false
true
IGHV1
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/9c0x/abangle/9c0x.abangle
sabdab_dataset/9c0x/annotation/9c0x_H_VH.ann
sabdab_dataset/9c0x/annotation/9c0x_L_VL.ann
sabdab_dataset/9c0x/imgt/9c0x_H_H.ann
sabdab_dataset/9c0x/imgt/9c0x_L_L.ann
sabdab_dataset/9c0x/sequence/9c0x_raw.pdb
sabdab_dataset/9c0x/sequence/9c0x_H_VH.fa
sabdab_dataset/9c0x/sequence/9c0x_L_VL.fa
sabdab_dataset/9c0x/structure/9c0x.pdb
sabdab_dataset/9c0x/structure/chothia/9c0x.pdb
false
false
test
9c1s
A
B
0
C
protein
null
outer surface protein c
IMMUNE SYSTEM/ANTIGEN
08/27/25
Fab F946 in complex with OspC type A
Borreliella burgdorferi; Homo sapiens
homo sapiens
homo sapiens
borreliella burgdorferi
Rudolph, M.J., Mantis, N.
2.6
X-RAY DIFFRACTION
0.251
0.196
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c1s/abangle/9c1s.abangle
sabdab_dataset/9c1s/annotation/9c1s_A_VH.ann
sabdab_dataset/9c1s/annotation/9c1s_B_VL.ann
sabdab_dataset/9c1s/imgt/9c1s_A_H.ann
sabdab_dataset/9c1s/imgt/9c1s_B_L.ann
sabdab_dataset/9c1s/sequence/9c1s_raw.pdb
sabdab_dataset/9c1s/sequence/9c1s_A_VH.fa
sabdab_dataset/9c1s/sequence/9c1s_B_VL.fa
sabdab_dataset/9c1s/structure/9c1s.pdb
sabdab_dataset/9c1s/structure/chothia/9c1s.pdb
true
false
train
9c1s
H
L
0
D
protein
null
outer surface protein c
IMMUNE SYSTEM/ANTIGEN
08/27/25
Fab F946 in complex with OspC type A
Borreliella burgdorferi; Homo sapiens
homo sapiens
homo sapiens
borreliella burgdorferi
Rudolph, M.J., Mantis, N.
2.6
X-RAY DIFFRACTION
0.251
0.196
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c1s/abangle/9c1s.abangle
sabdab_dataset/9c1s/annotation/9c1s_H_VH.ann
sabdab_dataset/9c1s/annotation/9c1s_L_VL.ann
sabdab_dataset/9c1s/imgt/9c1s_H_H.ann
sabdab_dataset/9c1s/imgt/9c1s_L_L.ann
sabdab_dataset/9c1s/sequence/9c1s_raw.pdb
sabdab_dataset/9c1s/sequence/9c1s_H_VH.fa
sabdab_dataset/9c1s/sequence/9c1s_L_VL.fa
sabdab_dataset/9c1s/structure/9c1s.pdb
sabdab_dataset/9c1s/structure/chothia/9c1s.pdb
true
false
train
9c24
A
B
0
C
protein
null
outer surface protein c
IMMUNE SYSTEM
08/27/25
Fab F946 in complex with OspCB
Borreliella burgdorferi; Homo sapiens
homo sapiens
homo sapiens
borreliella burgdorferi
Rudolph, M.J., Mantis, N.
2.8
X-RAY DIFFRACTION
0.288
0.234
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c24/abangle/9c24.abangle
sabdab_dataset/9c24/annotation/9c24_A_VH.ann
sabdab_dataset/9c24/annotation/9c24_B_VL.ann
sabdab_dataset/9c24/imgt/9c24_A_H.ann
sabdab_dataset/9c24/imgt/9c24_B_L.ann
sabdab_dataset/9c24/sequence/9c24_raw.pdb
sabdab_dataset/9c24/sequence/9c24_A_VH.fa
sabdab_dataset/9c24/sequence/9c24_B_VL.fa
sabdab_dataset/9c24/structure/9c24.pdb
sabdab_dataset/9c24/structure/chothia/9c24.pdb
false
false
train
9c24
H
L
0
D
protein
null
outer surface protein c
IMMUNE SYSTEM
08/27/25
Fab F946 in complex with OspCB
Borreliella burgdorferi; Homo sapiens
homo sapiens
homo sapiens
borreliella burgdorferi
Rudolph, M.J., Mantis, N.
2.8
X-RAY DIFFRACTION
0.288
0.234
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c24/abangle/9c24.abangle
sabdab_dataset/9c24/annotation/9c24_H_VH.ann
sabdab_dataset/9c24/annotation/9c24_L_VL.ann
sabdab_dataset/9c24/imgt/9c24_H_H.ann
sabdab_dataset/9c24/imgt/9c24_L_L.ann
sabdab_dataset/9c24/sequence/9c24_raw.pdb
sabdab_dataset/9c24/sequence/9c24_H_VH.fa
sabdab_dataset/9c24/sequence/9c24_L_VL.fa
sabdab_dataset/9c24/structure/9c24.pdb
sabdab_dataset/9c24/structure/chothia/9c24.pdb
false
false
validation
9c2h
B
C
0
D
protein
null
nucleoprotein
VIRAL PROTEIN
05/14/25
SARS-CoV-2 Nucleocapsid Dimerization Domain bound to Fab-NP1E9 and Fab-NP3B4
Mus sp.; Severe acute respiratory syndrome coronavirus 2
mus sp.
mus sp.
severe acute respiratory syndrome coronavirus2
Landeras-Bueno, S., Hariharan, C., Diaz Avalos, R., Ollmann Saphire, E.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV6
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/9c2h/abangle/9c2h.abangle
sabdab_dataset/9c2h/annotation/9c2h_B_VH.ann
sabdab_dataset/9c2h/annotation/9c2h_C_VL.ann
sabdab_dataset/9c2h/imgt/9c2h_B_H.ann
sabdab_dataset/9c2h/imgt/9c2h_C_L.ann
sabdab_dataset/9c2h/sequence/9c2h_raw.pdb
sabdab_dataset/9c2h/sequence/9c2h_B_VH.fa
sabdab_dataset/9c2h/sequence/9c2h_C_VL.fa
sabdab_dataset/9c2h/structure/9c2h.pdb
sabdab_dataset/9c2h/structure/chothia/9c2h.pdb
false
false
train
9c2h
E
F
0
A
protein
null
nucleoprotein
VIRAL PROTEIN
05/14/25
SARS-CoV-2 Nucleocapsid Dimerization Domain bound to Fab-NP1E9 and Fab-NP3B4
Mus sp.; Severe acute respiratory syndrome coronavirus 2
mus sp.
mus sp.
severe acute respiratory syndrome coronavirus2
Landeras-Bueno, S., Hariharan, C., Diaz Avalos, R., Ollmann Saphire, E.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/9c2h/abangle/9c2h.abangle
sabdab_dataset/9c2h/annotation/9c2h_E_VH.ann
sabdab_dataset/9c2h/annotation/9c2h_F_VL.ann
sabdab_dataset/9c2h/imgt/9c2h_E_H.ann
sabdab_dataset/9c2h/imgt/9c2h_F_L.ann
sabdab_dataset/9c2h/sequence/9c2h_raw.pdb
sabdab_dataset/9c2h/sequence/9c2h_E_VH.fa
sabdab_dataset/9c2h/sequence/9c2h_F_VL.fa
sabdab_dataset/9c2h/structure/9c2h.pdb
sabdab_dataset/9c2h/structure/chothia/9c2h.pdb
false
false
test
9c2h
G
H
0
A
protein
null
nucleoprotein
VIRAL PROTEIN
05/14/25
SARS-CoV-2 Nucleocapsid Dimerization Domain bound to Fab-NP1E9 and Fab-NP3B4
Mus sp.; Severe acute respiratory syndrome coronavirus 2
mus sp.
mus sp.
severe acute respiratory syndrome coronavirus2
Landeras-Bueno, S., Hariharan, C., Diaz Avalos, R., Ollmann Saphire, E.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV6
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/9c2h/abangle/9c2h.abangle
sabdab_dataset/9c2h/annotation/9c2h_G_VH.ann
sabdab_dataset/9c2h/annotation/9c2h_H_VL.ann
sabdab_dataset/9c2h/imgt/9c2h_G_H.ann
sabdab_dataset/9c2h/imgt/9c2h_H_L.ann
sabdab_dataset/9c2h/sequence/9c2h_raw.pdb
sabdab_dataset/9c2h/sequence/9c2h_G_VH.fa
sabdab_dataset/9c2h/sequence/9c2h_H_VL.fa
sabdab_dataset/9c2h/structure/9c2h.pdb
sabdab_dataset/9c2h/structure/chothia/9c2h.pdb
false
false
train
9c2h
I
J
0
D
protein
null
nucleoprotein
VIRAL PROTEIN
05/14/25
SARS-CoV-2 Nucleocapsid Dimerization Domain bound to Fab-NP1E9 and Fab-NP3B4
Mus sp.; Severe acute respiratory syndrome coronavirus 2
mus sp.
mus sp.
severe acute respiratory syndrome coronavirus2
Landeras-Bueno, S., Hariharan, C., Diaz Avalos, R., Ollmann Saphire, E.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/9c2h/abangle/9c2h.abangle
sabdab_dataset/9c2h/annotation/9c2h_I_VH.ann
sabdab_dataset/9c2h/annotation/9c2h_J_VL.ann
sabdab_dataset/9c2h/imgt/9c2h_I_H.ann
sabdab_dataset/9c2h/imgt/9c2h_J_L.ann
sabdab_dataset/9c2h/sequence/9c2h_raw.pdb
sabdab_dataset/9c2h/sequence/9c2h_I_VH.fa
sabdab_dataset/9c2h/sequence/9c2h_J_VL.fa
sabdab_dataset/9c2h/structure/9c2h.pdb
sabdab_dataset/9c2h/structure/chothia/9c2h.pdb
false
false
train
9c2k
A
B
0
C
nucleic-acid
null
rev response element
RNA
05/28/25
The crystal structure of HIV-1 Rev Response Element Stem-Loop II in complex with a Fab
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Ojha, M., Koirala, D.
2.42
X-RAY DIFFRACTION
0.265
0.206
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c2k/abangle/9c2k.abangle
sabdab_dataset/9c2k/annotation/9c2k_A_VH.ann
sabdab_dataset/9c2k/annotation/9c2k_B_VL.ann
sabdab_dataset/9c2k/imgt/9c2k_A_H.ann
sabdab_dataset/9c2k/imgt/9c2k_B_L.ann
sabdab_dataset/9c2k/sequence/9c2k_raw.pdb
sabdab_dataset/9c2k/sequence/9c2k_A_VH.fa
sabdab_dataset/9c2k/sequence/9c2k_B_VL.fa
sabdab_dataset/9c2k/structure/9c2k.pdb
sabdab_dataset/9c2k/structure/chothia/9c2k.pdb
false
false
train
9c2k
H
L
0
R
nucleic-acid
null
rev response element
RNA
05/28/25
The crystal structure of HIV-1 Rev Response Element Stem-Loop II in complex with a Fab
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Ojha, M., Koirala, D.
2.42
X-RAY DIFFRACTION
0.265
0.206
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c2k/abangle/9c2k.abangle
sabdab_dataset/9c2k/annotation/9c2k_H_VH.ann
sabdab_dataset/9c2k/annotation/9c2k_L_VL.ann
sabdab_dataset/9c2k/imgt/9c2k_H_H.ann
sabdab_dataset/9c2k/imgt/9c2k_L_L.ann
sabdab_dataset/9c2k/sequence/9c2k_raw.pdb
sabdab_dataset/9c2k/sequence/9c2k_H_VH.fa
sabdab_dataset/9c2k/sequence/9c2k_L_VL.fa
sabdab_dataset/9c2k/structure/9c2k.pdb
sabdab_dataset/9c2k/structure/chothia/9c2k.pdb
false
false
test
9c44
E
D
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
11/20/24
SARS-CoV-2 S + S2L20
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c44/abangle/9c44.abangle
sabdab_dataset/9c44/annotation/9c44_E_VH.ann
sabdab_dataset/9c44/annotation/9c44_D_VL.ann
sabdab_dataset/9c44/imgt/9c44_E_H.ann
sabdab_dataset/9c44/imgt/9c44_D_L.ann
sabdab_dataset/9c44/sequence/9c44_raw.pdb
sabdab_dataset/9c44/sequence/9c44_E_VH.fa
sabdab_dataset/9c44/sequence/9c44_D_VL.fa
sabdab_dataset/9c44/structure/9c44.pdb
sabdab_dataset/9c44/structure/chothia/9c44.pdb
false
false
test
9c44
F
G
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
11/20/24
SARS-CoV-2 S + S2L20
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c44/abangle/9c44.abangle
sabdab_dataset/9c44/annotation/9c44_F_VH.ann
sabdab_dataset/9c44/annotation/9c44_G_VL.ann
sabdab_dataset/9c44/imgt/9c44_F_H.ann
sabdab_dataset/9c44/imgt/9c44_G_L.ann
sabdab_dataset/9c44/sequence/9c44_raw.pdb
sabdab_dataset/9c44/sequence/9c44_F_VH.fa
sabdab_dataset/9c44/sequence/9c44_G_VL.fa
sabdab_dataset/9c44/structure/9c44.pdb
sabdab_dataset/9c44/structure/chothia/9c44.pdb
false
false
test
9c44
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
11/20/24
SARS-CoV-2 S + S2L20
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
2.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c44/abangle/9c44.abangle
sabdab_dataset/9c44/annotation/9c44_H_VH.ann
sabdab_dataset/9c44/annotation/9c44_L_VL.ann
sabdab_dataset/9c44/imgt/9c44_H_H.ann
sabdab_dataset/9c44/imgt/9c44_L_L.ann
sabdab_dataset/9c44/sequence/9c44_raw.pdb
sabdab_dataset/9c44/sequence/9c44_H_VH.fa
sabdab_dataset/9c44/sequence/9c44_L_VL.fa
sabdab_dataset/9c44/structure/9c44.pdb
sabdab_dataset/9c44/structure/chothia/9c44.pdb
false
false
train
9c45
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
11/20/24
SARS-CoV-2 S + S2L20 (local refinement of NTD and S2L20 Fab variable region)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c45/abangle/9c45.abangle
sabdab_dataset/9c45/annotation/9c45_H_VH.ann
sabdab_dataset/9c45/annotation/9c45_L_VL.ann
sabdab_dataset/9c45/imgt/9c45_H_H.ann
sabdab_dataset/9c45/imgt/9c45_L_L.ann
sabdab_dataset/9c45/sequence/9c45_raw.pdb
sabdab_dataset/9c45/sequence/9c45_H_VH.fa
sabdab_dataset/9c45/sequence/9c45_L_VL.fa
sabdab_dataset/9c45/structure/9c45.pdb
sabdab_dataset/9c45/structure/chothia/9c45.pdb
false
false
validation
9c6y
A
B
0
E
protein
null
spike protein s2'
VIRAL PROTEIN/IMMUNE SYSTEM
10/08/25
Crystal structure of SARS-CoV-2 XBB.1.5 RBD bound to COV2-3906 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus
Buchman, C.D., Crowe, J.E.
2.68
X-RAY DIFFRACTION
0.242
0.207
false
true
IGHV4
IGLV6
Lambda
null
null
null
null
null
sabdab_dataset/9c6y/abangle/9c6y.abangle
sabdab_dataset/9c6y/annotation/9c6y_A_VH.ann
sabdab_dataset/9c6y/annotation/9c6y_B_VL.ann
sabdab_dataset/9c6y/imgt/9c6y_A_H.ann
sabdab_dataset/9c6y/imgt/9c6y_B_L.ann
sabdab_dataset/9c6y/sequence/9c6y_raw.pdb
sabdab_dataset/9c6y/sequence/9c6y_A_VH.fa
sabdab_dataset/9c6y/sequence/9c6y_B_VL.fa
sabdab_dataset/9c6y/structure/9c6y.pdb
sabdab_dataset/9c6y/structure/chothia/9c6y.pdb
true
false
train
9c6y
C
D
0
F
protein
null
spike protein s2'
VIRAL PROTEIN/IMMUNE SYSTEM
10/08/25
Crystal structure of SARS-CoV-2 XBB.1.5 RBD bound to COV2-3906 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus
Buchman, C.D., Crowe, J.E.
2.68
X-RAY DIFFRACTION
0.242
0.207
false
true
IGHV4
IGLV6
Lambda
null
null
null
null
null
sabdab_dataset/9c6y/abangle/9c6y.abangle
sabdab_dataset/9c6y/annotation/9c6y_C_VH.ann
sabdab_dataset/9c6y/annotation/9c6y_D_VL.ann
sabdab_dataset/9c6y/imgt/9c6y_C_H.ann
sabdab_dataset/9c6y/imgt/9c6y_D_L.ann
sabdab_dataset/9c6y/sequence/9c6y_raw.pdb
sabdab_dataset/9c6y/sequence/9c6y_C_VH.fa
sabdab_dataset/9c6y/sequence/9c6y_D_VL.fa
sabdab_dataset/9c6y/structure/9c6y.pdb
sabdab_dataset/9c6y/structure/chothia/9c6y.pdb
true
false
test
9c75
H
L
0
R
nucleic-acid
null
rev response element
RNA/IMMUNE SYSTEM
05/28/25
The crystal structure of HIV-1 Rev Response Element Stem-Loop II G34U mutant in complex with a Fab
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Ojha, M., Koirala, D.
3.04
X-RAY DIFFRACTION
0.252
0.206
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c75/abangle/9c75.abangle
sabdab_dataset/9c75/annotation/9c75_H_VH.ann
sabdab_dataset/9c75/annotation/9c75_L_VL.ann
sabdab_dataset/9c75/imgt/9c75_H_H.ann
sabdab_dataset/9c75/imgt/9c75_L_L.ann
sabdab_dataset/9c75/sequence/9c75_raw.pdb
sabdab_dataset/9c75/sequence/9c75_H_VH.fa
sabdab_dataset/9c75/sequence/9c75_L_VL.fa
sabdab_dataset/9c75/structure/9c75.pdb
sabdab_dataset/9c75/structure/chothia/9c75.pdb
false
false
train
9c7d
H
L
0
B
peptide
null
circumsporozoite protein
IMMUNE SYSTEM
12/25/24
Human monoclonal antibody MAD22-38 bound to the N-terminus of cleaved circumsporozoite protein
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
plasmodium falciparum 3d7
Moskovitz, R., Wilson, I.A.
1.99
X-RAY DIFFRACTION
0.232
0.184
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c7d/abangle/9c7d.abangle
sabdab_dataset/9c7d/annotation/9c7d_H_VH.ann
sabdab_dataset/9c7d/annotation/9c7d_L_VL.ann
sabdab_dataset/9c7d/imgt/9c7d_H_H.ann
sabdab_dataset/9c7d/imgt/9c7d_L_L.ann
sabdab_dataset/9c7d/sequence/9c7d_raw.pdb
sabdab_dataset/9c7d/sequence/9c7d_H_VH.fa
sabdab_dataset/9c7d/sequence/9c7d_L_VL.fa
sabdab_dataset/9c7d/structure/9c7d.pdb
sabdab_dataset/9c7d/structure/chothia/9c7d.pdb
true
false
train
9c7f
A
B
0
G
peptide
null
circumsporozoite protein
IMMUNE SYSTEM
12/25/24
Human monoclonal antibody MAD24-01 bound to the N-terminus of cleaved circumsporozoite protein
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
plasmodium falciparum 3d7
Moskovitz, R., Wilson, I.A.
1.82
X-RAY DIFFRACTION
0.238
0.211
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9c7f/abangle/9c7f.abangle
sabdab_dataset/9c7f/annotation/9c7f_A_VH.ann
sabdab_dataset/9c7f/annotation/9c7f_B_VL.ann
sabdab_dataset/9c7f/imgt/9c7f_A_H.ann
sabdab_dataset/9c7f/imgt/9c7f_B_L.ann
sabdab_dataset/9c7f/sequence/9c7f_raw.pdb
sabdab_dataset/9c7f/sequence/9c7f_A_VH.fa
sabdab_dataset/9c7f/sequence/9c7f_B_VL.fa
sabdab_dataset/9c7f/structure/9c7f.pdb
sabdab_dataset/9c7f/structure/chothia/9c7f.pdb
true
false
train
9c7f
C
D
0
I
peptide
null
circumsporozoite protein
IMMUNE SYSTEM
12/25/24
Human monoclonal antibody MAD24-01 bound to the N-terminus of cleaved circumsporozoite protein
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
plasmodium falciparum 3d7
Moskovitz, R., Wilson, I.A.
1.82
X-RAY DIFFRACTION
0.238
0.211
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9c7f/abangle/9c7f.abangle
sabdab_dataset/9c7f/annotation/9c7f_C_VH.ann
sabdab_dataset/9c7f/annotation/9c7f_D_VL.ann
sabdab_dataset/9c7f/imgt/9c7f_C_H.ann
sabdab_dataset/9c7f/imgt/9c7f_D_L.ann
sabdab_dataset/9c7f/sequence/9c7f_raw.pdb
sabdab_dataset/9c7f/sequence/9c7f_C_VH.fa
sabdab_dataset/9c7f/sequence/9c7f_D_VL.fa
sabdab_dataset/9c7f/structure/9c7f.pdb
sabdab_dataset/9c7f/structure/chothia/9c7f.pdb
true
false
train
9c7f
E
F
0
Q
peptide
null
circumsporozoite protein
IMMUNE SYSTEM
12/25/24
Human monoclonal antibody MAD24-01 bound to the N-terminus of cleaved circumsporozoite protein
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
plasmodium falciparum 3d7
Moskovitz, R., Wilson, I.A.
1.82
X-RAY DIFFRACTION
0.238
0.211
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9c7f/abangle/9c7f.abangle
sabdab_dataset/9c7f/annotation/9c7f_E_VH.ann
sabdab_dataset/9c7f/annotation/9c7f_F_VL.ann
sabdab_dataset/9c7f/imgt/9c7f_E_H.ann
sabdab_dataset/9c7f/imgt/9c7f_F_L.ann
sabdab_dataset/9c7f/sequence/9c7f_raw.pdb
sabdab_dataset/9c7f/sequence/9c7f_E_VH.fa
sabdab_dataset/9c7f/sequence/9c7f_F_VL.fa
sabdab_dataset/9c7f/structure/9c7f.pdb
sabdab_dataset/9c7f/structure/chothia/9c7f.pdb
true
false
train
9c7f
H
L
0
J
peptide
null
circumsporozoite protein
IMMUNE SYSTEM
12/25/24
Human monoclonal antibody MAD24-01 bound to the N-terminus of cleaved circumsporozoite protein
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
plasmodium falciparum 3d7
Moskovitz, R., Wilson, I.A.
1.82
X-RAY DIFFRACTION
0.238
0.211
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9c7f/abangle/9c7f.abangle
sabdab_dataset/9c7f/annotation/9c7f_H_VH.ann
sabdab_dataset/9c7f/annotation/9c7f_L_VL.ann
sabdab_dataset/9c7f/imgt/9c7f_H_H.ann
sabdab_dataset/9c7f/imgt/9c7f_L_L.ann
sabdab_dataset/9c7f/sequence/9c7f_raw.pdb
sabdab_dataset/9c7f/sequence/9c7f_H_VH.fa
sabdab_dataset/9c7f/sequence/9c7f_L_VL.fa
sabdab_dataset/9c7f/structure/9c7f.pdb
sabdab_dataset/9c7f/structure/chothia/9c7f.pdb
true
false
train
9c7s
H
L
0
C
protein
null
spike protein s2'
VIRAL PROTEIN/IMMUNE SYSTEM
10/08/25
Cryo EM structure of SARS-COV-2 (BQ 1.1) RBD in complex with Fab COV2-3891 (local refine)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Binshtein, E., Crowe, J.E.
4.0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/9c7s/abangle/9c7s.abangle
sabdab_dataset/9c7s/annotation/9c7s_H_VH.ann
sabdab_dataset/9c7s/annotation/9c7s_L_VL.ann
sabdab_dataset/9c7s/imgt/9c7s_H_H.ann
sabdab_dataset/9c7s/imgt/9c7s_L_L.ann
sabdab_dataset/9c7s/sequence/9c7s_raw.pdb
sabdab_dataset/9c7s/sequence/9c7s_H_VH.fa
sabdab_dataset/9c7s/sequence/9c7s_L_VL.fa
sabdab_dataset/9c7s/structure/9c7s.pdb
sabdab_dataset/9c7s/structure/chothia/9c7s.pdb
false
false
train
9c7x
A
B
0
C
peptide
null
spike protein s2'
IMMUNE SYSTEM
06/18/25
Crystal structure of SARS-CoV-2 antibody 1H06 in complex with a HR2 peptide
Mus musculus; Severe acute respiratory syndrome coronavirus 2
mus musculus
mus musculus
severe acute respiratory syndrome coronavirus2
Van Wazer, D.J., Zhou, T., Kwong, P.D.
1.96
X-RAY DIFFRACTION
0.215
0.172
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9c7x/abangle/9c7x.abangle
sabdab_dataset/9c7x/annotation/9c7x_A_VH.ann
sabdab_dataset/9c7x/annotation/9c7x_B_VL.ann
sabdab_dataset/9c7x/imgt/9c7x_A_H.ann
sabdab_dataset/9c7x/imgt/9c7x_B_L.ann
sabdab_dataset/9c7x/sequence/9c7x_raw.pdb
sabdab_dataset/9c7x/sequence/9c7x_A_VH.fa
sabdab_dataset/9c7x/sequence/9c7x_B_VL.fa
sabdab_dataset/9c7x/structure/9c7x.pdb
sabdab_dataset/9c7x/structure/chothia/9c7x.pdb
false
false
train
9c9k
H
L
0
null
null
null
null
IMMUNE SYSTEM
08/27/25
Anti-OspA Fab 319-33
Homo sapiens
homo sapiens
homo sapiens
null
Rudolph, M.J., Mantis, N.
1.601
X-RAY DIFFRACTION
0.200
0.172
false
true
IGHV5
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9c9k/abangle/9c9k.abangle
sabdab_dataset/9c9k/annotation/9c9k_H_VH.ann
sabdab_dataset/9c9k/annotation/9c9k_L_VL.ann
sabdab_dataset/9c9k/imgt/9c9k_H_H.ann
sabdab_dataset/9c9k/imgt/9c9k_L_L.ann
sabdab_dataset/9c9k/sequence/9c9k_raw.pdb
sabdab_dataset/9c9k/sequence/9c9k_H_VH.fa
sabdab_dataset/9c9k/sequence/9c9k_L_VL.fa
sabdab_dataset/9c9k/structure/9c9k.pdb
sabdab_dataset/9c9k/structure/chothia/9c9k.pdb
false
false
train
9cb1
A
D
0
G
protein
null
fusion glycoprotein f0
VIRAL PROTEIN/IMMUNE SYSTEM
05/28/25
Cryo-EM Structure of the Human Neutralizing Antibody 5-1 in Complex with Prefusion Human Metapneumovirus F Glycoprotein
Homo sapiens; human metapneumovirus
homo sapiens
homo sapiens
human metapneumovirus
Guo, L.Q., McLellan, J.S.
4.24
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cb1/abangle/9cb1.abangle
sabdab_dataset/9cb1/annotation/9cb1_A_VH.ann
sabdab_dataset/9cb1/annotation/9cb1_D_VL.ann
sabdab_dataset/9cb1/imgt/9cb1_A_H.ann
sabdab_dataset/9cb1/imgt/9cb1_D_L.ann
sabdab_dataset/9cb1/sequence/9cb1_raw.pdb
sabdab_dataset/9cb1/sequence/9cb1_A_VH.fa
sabdab_dataset/9cb1/sequence/9cb1_D_VL.fa
sabdab_dataset/9cb1/structure/9cb1.pdb
sabdab_dataset/9cb1/structure/chothia/9cb1.pdb
false
false
train
9cb1
B
E
0
H
protein
null
fusion glycoprotein f0
VIRAL PROTEIN/IMMUNE SYSTEM
05/28/25
Cryo-EM Structure of the Human Neutralizing Antibody 5-1 in Complex with Prefusion Human Metapneumovirus F Glycoprotein
Homo sapiens; human metapneumovirus
homo sapiens
homo sapiens
human metapneumovirus
Guo, L.Q., McLellan, J.S.
4.24
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cb1/abangle/9cb1.abangle
sabdab_dataset/9cb1/annotation/9cb1_B_VH.ann
sabdab_dataset/9cb1/annotation/9cb1_E_VL.ann
sabdab_dataset/9cb1/imgt/9cb1_B_H.ann
sabdab_dataset/9cb1/imgt/9cb1_E_L.ann
sabdab_dataset/9cb1/sequence/9cb1_raw.pdb
sabdab_dataset/9cb1/sequence/9cb1_B_VH.fa
sabdab_dataset/9cb1/sequence/9cb1_E_VL.fa
sabdab_dataset/9cb1/structure/9cb1.pdb
sabdab_dataset/9cb1/structure/chothia/9cb1.pdb
false
false
validation
9cb1
C
F
0
I
protein
null
fusion glycoprotein f0
VIRAL PROTEIN/IMMUNE SYSTEM
05/28/25
Cryo-EM Structure of the Human Neutralizing Antibody 5-1 in Complex with Prefusion Human Metapneumovirus F Glycoprotein
Homo sapiens; human metapneumovirus
homo sapiens
homo sapiens
human metapneumovirus
Guo, L.Q., McLellan, J.S.
4.24
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cb1/abangle/9cb1.abangle
sabdab_dataset/9cb1/annotation/9cb1_C_VH.ann
sabdab_dataset/9cb1/annotation/9cb1_F_VL.ann
sabdab_dataset/9cb1/imgt/9cb1_C_H.ann
sabdab_dataset/9cb1/imgt/9cb1_F_L.ann
sabdab_dataset/9cb1/sequence/9cb1_raw.pdb
sabdab_dataset/9cb1/sequence/9cb1_C_VH.fa
sabdab_dataset/9cb1/sequence/9cb1_F_VL.fa
sabdab_dataset/9cb1/structure/9cb1.pdb
sabdab_dataset/9cb1/structure/chothia/9cb1.pdb
false
false
test
9cb5
D
H
0
B | C
protein | nucleic-acid
NA | NA
nucleolin | myc promoter g-quadruplex
TRANSCRIPTION/DNA
04/30/25
Crystal structure of nucleolin in complex with MYC promoter G-quadruplex
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Chen, L., Dickerhoff, J., Noinaj, N., Yang, D.
2.6
X-RAY DIFFRACTION
0.254
0.232
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cb5/abangle/9cb5.abangle
sabdab_dataset/9cb5/annotation/9cb5_D_VH.ann
sabdab_dataset/9cb5/annotation/9cb5_H_VL.ann
sabdab_dataset/9cb5/imgt/9cb5_D_H.ann
sabdab_dataset/9cb5/imgt/9cb5_H_L.ann
sabdab_dataset/9cb5/sequence/9cb5_raw.pdb
sabdab_dataset/9cb5/sequence/9cb5_D_VH.fa
sabdab_dataset/9cb5/sequence/9cb5_H_VL.fa
sabdab_dataset/9cb5/structure/9cb5.pdb
sabdab_dataset/9cb5/structure/chothia/9cb5.pdb
false
false
validation
9cb5
G
I
0
A | F
protein | nucleic-acid
NA | NA
nucleolin | myc promoter g-quadruplex
TRANSCRIPTION/DNA
04/30/25
Crystal structure of nucleolin in complex with MYC promoter G-quadruplex
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Chen, L., Dickerhoff, J., Noinaj, N., Yang, D.
2.6
X-RAY DIFFRACTION
0.254
0.232
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cb5/abangle/9cb5.abangle
sabdab_dataset/9cb5/annotation/9cb5_G_VH.ann
sabdab_dataset/9cb5/annotation/9cb5_I_VL.ann
sabdab_dataset/9cb5/imgt/9cb5_G_H.ann
sabdab_dataset/9cb5/imgt/9cb5_I_L.ann
sabdab_dataset/9cb5/sequence/9cb5_raw.pdb
sabdab_dataset/9cb5/sequence/9cb5_G_VH.fa
sabdab_dataset/9cb5/sequence/9cb5_I_VL.fa
sabdab_dataset/9cb5/structure/9cb5.pdb
sabdab_dataset/9cb5/structure/chothia/9cb5.pdb
false
false
test
9cbn
A
B
0
C
protein
null
structural protein
VIRAL PROTEIN/IMMUNE SYSTEM
12/25/24
HAstV1 spike in complex with neutralizing Fabs 3H4 and 3B4
Human astrovirus 1; Mus musculus
mus musculus
mus musculus
human astrovirus 1
Lanning, S., DuBois, R.M., Balasco Serrao, V.H.
3.33
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/9cbn/abangle/9cbn.abangle
sabdab_dataset/9cbn/annotation/9cbn_A_VH.ann
sabdab_dataset/9cbn/annotation/9cbn_B_VL.ann
sabdab_dataset/9cbn/imgt/9cbn_A_H.ann
sabdab_dataset/9cbn/imgt/9cbn_B_L.ann
sabdab_dataset/9cbn/sequence/9cbn_raw.pdb
sabdab_dataset/9cbn/sequence/9cbn_A_VH.fa
sabdab_dataset/9cbn/sequence/9cbn_B_VL.fa
sabdab_dataset/9cbn/structure/9cbn.pdb
sabdab_dataset/9cbn/structure/chothia/9cbn.pdb
false
false
validation
9cbn
E
F
0
D
protein
null
structural protein
VIRAL PROTEIN/IMMUNE SYSTEM
12/25/24
HAstV1 spike in complex with neutralizing Fabs 3H4 and 3B4
Human astrovirus 1; Mus musculus
mus musculus
mus musculus
human astrovirus 1
Lanning, S., DuBois, R.M., Balasco Serrao, V.H.
3.33
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/9cbn/abangle/9cbn.abangle
sabdab_dataset/9cbn/annotation/9cbn_E_VH.ann
sabdab_dataset/9cbn/annotation/9cbn_F_VL.ann
sabdab_dataset/9cbn/imgt/9cbn_E_H.ann
sabdab_dataset/9cbn/imgt/9cbn_F_L.ann
sabdab_dataset/9cbn/sequence/9cbn_raw.pdb
sabdab_dataset/9cbn/sequence/9cbn_E_VH.fa
sabdab_dataset/9cbn/sequence/9cbn_F_VL.fa
sabdab_dataset/9cbn/structure/9cbn.pdb
sabdab_dataset/9cbn/structure/chothia/9cbn.pdb
false
false
train
9cbn
G
H
0
C
protein
null
structural protein
VIRAL PROTEIN/IMMUNE SYSTEM
12/25/24
HAstV1 spike in complex with neutralizing Fabs 3H4 and 3B4
Human astrovirus 1; Mus musculus
mus musculus
mus musculus
human astrovirus 1
Lanning, S., DuBois, R.M., Balasco Serrao, V.H.
3.33
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/9cbn/abangle/9cbn.abangle
sabdab_dataset/9cbn/annotation/9cbn_G_VH.ann
sabdab_dataset/9cbn/annotation/9cbn_H_VL.ann
sabdab_dataset/9cbn/imgt/9cbn_G_H.ann
sabdab_dataset/9cbn/imgt/9cbn_H_L.ann
sabdab_dataset/9cbn/sequence/9cbn_raw.pdb
sabdab_dataset/9cbn/sequence/9cbn_G_VH.fa
sabdab_dataset/9cbn/sequence/9cbn_H_VL.fa
sabdab_dataset/9cbn/structure/9cbn.pdb
sabdab_dataset/9cbn/structure/chothia/9cbn.pdb
false
false
train
9ccg
B
C
0
A
protein
null
potra domain-containing protein
MEMBRANE PROTEIN
09/17/25
Fusobacterium nucleatum BamA-Fab 9 complex
Fusobacterium nucleatum; synthetic construct
synthetic construct
synthetic construct
fusobacterium nucleatum
Overly Cottom, C., Noinaj, N.
3.87
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9ccg/abangle/9ccg.abangle
sabdab_dataset/9ccg/annotation/9ccg_B_VH.ann
sabdab_dataset/9ccg/annotation/9ccg_C_VL.ann
sabdab_dataset/9ccg/imgt/9ccg_B_H.ann
sabdab_dataset/9ccg/imgt/9ccg_C_L.ann
sabdab_dataset/9ccg/sequence/9ccg_raw.pdb
sabdab_dataset/9ccg/sequence/9ccg_B_VH.fa
sabdab_dataset/9ccg/sequence/9ccg_C_VL.fa
sabdab_dataset/9ccg/structure/9ccg.pdb
sabdab_dataset/9ccg/structure/chothia/9ccg.pdb
false
false
train
9ccg
F
E
0
D
protein
null
potra domain-containing protein
MEMBRANE PROTEIN
09/17/25
Fusobacterium nucleatum BamA-Fab 9 complex
Fusobacterium nucleatum; synthetic construct
synthetic construct
synthetic construct
fusobacterium nucleatum
Overly Cottom, C., Noinaj, N.
3.87
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9ccg/abangle/9ccg.abangle
sabdab_dataset/9ccg/annotation/9ccg_F_VH.ann
sabdab_dataset/9ccg/annotation/9ccg_E_VL.ann
sabdab_dataset/9ccg/imgt/9ccg_F_H.ann
sabdab_dataset/9ccg/imgt/9ccg_E_L.ann
sabdab_dataset/9ccg/sequence/9ccg_raw.pdb
sabdab_dataset/9ccg/sequence/9ccg_F_VH.fa
sabdab_dataset/9ccg/sequence/9ccg_E_VL.fa
sabdab_dataset/9ccg/structure/9ccg.pdb
sabdab_dataset/9ccg/structure/chothia/9ccg.pdb
false
false
train
9cci
B
C
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
03/12/25
Dissecting human monoclonal antibody responses from mRNA and protein-based booster vaccinations against XBB1.5 SARS-CoV-2
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Bajic, G., Jaiswal, D.
2.65
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cci/abangle/9cci.abangle
sabdab_dataset/9cci/annotation/9cci_B_VH.ann
sabdab_dataset/9cci/annotation/9cci_C_VL.ann
sabdab_dataset/9cci/imgt/9cci_B_H.ann
sabdab_dataset/9cci/imgt/9cci_C_L.ann
sabdab_dataset/9cci/sequence/9cci_raw.pdb
sabdab_dataset/9cci/sequence/9cci_B_VH.fa
sabdab_dataset/9cci/sequence/9cci_C_VL.fa
sabdab_dataset/9cci/structure/9cci.pdb
sabdab_dataset/9cci/structure/chothia/9cci.pdb
false
false
train
9ccj
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
03/12/25
Dissecting human monoclonal antibody responses from mRNA and protein-based booster vaccinations against XBB1.5 SARS-CoV-2
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Bajic, G., Civljak, A.
2.37
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/9ccj/abangle/9ccj.abangle
sabdab_dataset/9ccj/annotation/9ccj_H_VH.ann
sabdab_dataset/9ccj/annotation/9ccj_L_VL.ann
sabdab_dataset/9ccj/imgt/9ccj_H_H.ann
sabdab_dataset/9ccj/imgt/9ccj_L_L.ann
sabdab_dataset/9ccj/sequence/9ccj_raw.pdb
sabdab_dataset/9ccj/sequence/9ccj_H_VH.fa
sabdab_dataset/9ccj/sequence/9ccj_L_VL.fa
sabdab_dataset/9ccj/structure/9ccj.pdb
sabdab_dataset/9ccj/structure/chothia/9ccj.pdb
false
false
train
9ccs
C
B
0
A
protein
null
type 1 fimbiral adhesin fimh
CELL ADHESION
07/02/25
CryoEM Structure of Escherichia coli FimCH in complex with 2H04 Fab
Escherichia coli UTI89; Mus musculus
mus musculus
mus musculus
escherichia coli uti89
Lopatto, E.D.B., Hultgren, S.J.
3.17
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/9ccs/abangle/9ccs.abangle
sabdab_dataset/9ccs/annotation/9ccs_C_VH.ann
sabdab_dataset/9ccs/annotation/9ccs_B_VL.ann
sabdab_dataset/9ccs/imgt/9ccs_C_H.ann
sabdab_dataset/9ccs/imgt/9ccs_B_L.ann
sabdab_dataset/9ccs/sequence/9ccs_raw.pdb
sabdab_dataset/9ccs/sequence/9ccs_C_VH.fa
sabdab_dataset/9ccs/sequence/9ccs_B_VL.fa
sabdab_dataset/9ccs/structure/9ccs.pdb
sabdab_dataset/9ccs/structure/chothia/9ccs.pdb
false
false
train
9cct
C
B
0
A
protein
null
type 1 fimbiral adhesin fimh
CELL ADHESION
07/02/25
CryoEM Structure of Escherichia coli FimCH in complex with B7 Fab
Escherichia coli UTI89; Mus musculus
mus musculus
mus musculus
escherichia coli uti89
Lopatto, E.D.B., Hultgren, S.J.
3.46
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/9cct/abangle/9cct.abangle
sabdab_dataset/9cct/annotation/9cct_C_VH.ann
sabdab_dataset/9cct/annotation/9cct_B_VL.ann
sabdab_dataset/9cct/imgt/9cct_C_H.ann
sabdab_dataset/9cct/imgt/9cct_B_L.ann
sabdab_dataset/9cct/sequence/9cct_raw.pdb
sabdab_dataset/9cct/sequence/9cct_C_VH.fa
sabdab_dataset/9cct/sequence/9cct_B_VL.fa
sabdab_dataset/9cct/structure/9cct.pdb
sabdab_dataset/9cct/structure/chothia/9cct.pdb
false
false
train
9ccu
C
B
0
A
protein
null
type 1 fimbiral adhesin fimh
CELL ADHESION
07/02/25
CryoEM Structure of Escherichia coli FimCH in complex with F7 Fab
Escherichia coli UTI89; Mus musculus
mus musculus
mus musculus
escherichia coli uti89
Lopatto, E.D.B., Hultgren, S.J.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/9ccu/abangle/9ccu.abangle
sabdab_dataset/9ccu/annotation/9ccu_C_VH.ann
sabdab_dataset/9ccu/annotation/9ccu_B_VL.ann
sabdab_dataset/9ccu/imgt/9ccu_C_H.ann
sabdab_dataset/9ccu/imgt/9ccu_B_L.ann
sabdab_dataset/9ccu/sequence/9ccu_raw.pdb
sabdab_dataset/9ccu/sequence/9ccu_C_VH.fa
sabdab_dataset/9ccu/sequence/9ccu_B_VL.fa
sabdab_dataset/9ccu/structure/9ccu.pdb
sabdab_dataset/9ccu/structure/chothia/9ccu.pdb
false
false
train
9ccw
C
B
0
A
protein
null
type 1 fimbiral adhesin fimh
CELL ADHESION
07/02/25
CryoEM Structure of Escherichia coli FimCH in complex with 2C07 Fab
Escherichia coli UTI89; Mus musculus
mus musculus
mus musculus
escherichia coli uti89
Lopatto, E.D.B., Hultgren, S.J.
3.69
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/9ccw/abangle/9ccw.abangle
sabdab_dataset/9ccw/annotation/9ccw_C_VH.ann
sabdab_dataset/9ccw/annotation/9ccw_B_VL.ann
sabdab_dataset/9ccw/imgt/9ccw_C_H.ann
sabdab_dataset/9ccw/imgt/9ccw_B_L.ann
sabdab_dataset/9ccw/sequence/9ccw_raw.pdb
sabdab_dataset/9ccw/sequence/9ccw_C_VH.fa
sabdab_dataset/9ccw/sequence/9ccw_B_VL.fa
sabdab_dataset/9ccw/structure/9ccw.pdb
sabdab_dataset/9ccw/structure/chothia/9ccw.pdb
false
false
train
9cds
B
A
0
C
protein
null
outer surface protein a
IMMUNE SYSTEM
09/24/25
Crystal structure of OspA ST1 from B. burgdorferi bound to monoclonal antibody LA-2
Borreliella burgdorferi B31; Mus musculus
mus musculus
mus musculus
borreliella burgdorferi b31
Laciak, A.R., Lai, Y.-T., Dhingra, Y.
1.85
X-RAY DIFFRACTION
0.233
0.202
false
true
IGHV9
IGKV19
Kappa
null
null
null
null
null
sabdab_dataset/9cds/abangle/9cds.abangle
sabdab_dataset/9cds/annotation/9cds_B_VH.ann
sabdab_dataset/9cds/annotation/9cds_A_VL.ann
sabdab_dataset/9cds/imgt/9cds_B_H.ann
sabdab_dataset/9cds/imgt/9cds_A_L.ann
sabdab_dataset/9cds/sequence/9cds_raw.pdb
sabdab_dataset/9cds/sequence/9cds_B_VH.fa
sabdab_dataset/9cds/sequence/9cds_A_VL.fa
sabdab_dataset/9cds/structure/9cds.pdb
sabdab_dataset/9cds/structure/chothia/9cds.pdb
true
false
train
9cds
E
D
0
F
protein
null
outer surface protein a
IMMUNE SYSTEM
09/24/25
Crystal structure of OspA ST1 from B. burgdorferi bound to monoclonal antibody LA-2
Borreliella burgdorferi B31; Mus musculus
mus musculus
mus musculus
borreliella burgdorferi b31
Laciak, A.R., Lai, Y.-T., Dhingra, Y.
1.85
X-RAY DIFFRACTION
0.233
0.202
false
true
IGHV9
IGKV19
Kappa
null
null
null
null
null
sabdab_dataset/9cds/abangle/9cds.abangle
sabdab_dataset/9cds/annotation/9cds_E_VH.ann
sabdab_dataset/9cds/annotation/9cds_D_VL.ann
sabdab_dataset/9cds/imgt/9cds_E_H.ann
sabdab_dataset/9cds/imgt/9cds_D_L.ann
sabdab_dataset/9cds/sequence/9cds_raw.pdb
sabdab_dataset/9cds/sequence/9cds_E_VH.fa
sabdab_dataset/9cds/sequence/9cds_D_VL.fa
sabdab_dataset/9cds/structure/9cds.pdb
sabdab_dataset/9cds/structure/chothia/9cds.pdb
true
false
train
9cf5
H
G
0
E
protein
null
envelope glycoprotein gp120
VIRAL PROTEIN/IMMUNE SYSTEM
11/19/25
STRUCTURE OF CD4 MIMETIC CJF-III-288 IN COMPLEX WITH BG505 SOSIP.664 HIV-1ENV TRIMER AND 17B FAB
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Niu, L., Tolbert, W.D., Pazgier, M.
3.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cf5/abangle/9cf5.abangle
sabdab_dataset/9cf5/annotation/9cf5_H_VH.ann
sabdab_dataset/9cf5/annotation/9cf5_G_VL.ann
sabdab_dataset/9cf5/imgt/9cf5_H_H.ann
sabdab_dataset/9cf5/imgt/9cf5_G_L.ann
sabdab_dataset/9cf5/sequence/9cf5_raw.pdb
sabdab_dataset/9cf5/sequence/9cf5_H_VH.fa
sabdab_dataset/9cf5/sequence/9cf5_G_VL.fa
sabdab_dataset/9cf5/structure/9cf5.pdb
sabdab_dataset/9cf5/structure/chothia/9cf5.pdb
false
false
train
9cf5
J
I
0
C
protein
null
envelope glycoprotein gp120
VIRAL PROTEIN/IMMUNE SYSTEM
11/19/25
STRUCTURE OF CD4 MIMETIC CJF-III-288 IN COMPLEX WITH BG505 SOSIP.664 HIV-1ENV TRIMER AND 17B FAB
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Niu, L., Tolbert, W.D., Pazgier, M.
3.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cf5/abangle/9cf5.abangle
sabdab_dataset/9cf5/annotation/9cf5_J_VH.ann
sabdab_dataset/9cf5/annotation/9cf5_I_VL.ann
sabdab_dataset/9cf5/imgt/9cf5_J_H.ann
sabdab_dataset/9cf5/imgt/9cf5_I_L.ann
sabdab_dataset/9cf5/sequence/9cf5_raw.pdb
sabdab_dataset/9cf5/sequence/9cf5_J_VH.fa
sabdab_dataset/9cf5/sequence/9cf5_I_VL.fa
sabdab_dataset/9cf5/structure/9cf5.pdb
sabdab_dataset/9cf5/structure/chothia/9cf5.pdb
false
false
train
9cf5
L
K
0
A
protein
null
envelope glycoprotein gp120
VIRAL PROTEIN/IMMUNE SYSTEM
11/19/25
STRUCTURE OF CD4 MIMETIC CJF-III-288 IN COMPLEX WITH BG505 SOSIP.664 HIV-1ENV TRIMER AND 17B FAB
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Niu, L., Tolbert, W.D., Pazgier, M.
3.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cf5/abangle/9cf5.abangle
sabdab_dataset/9cf5/annotation/9cf5_L_VH.ann
sabdab_dataset/9cf5/annotation/9cf5_K_VL.ann
sabdab_dataset/9cf5/imgt/9cf5_L_H.ann
sabdab_dataset/9cf5/imgt/9cf5_K_L.ann
sabdab_dataset/9cf5/sequence/9cf5_raw.pdb
sabdab_dataset/9cf5/sequence/9cf5_L_VH.fa
sabdab_dataset/9cf5/sequence/9cf5_K_VL.fa
sabdab_dataset/9cf5/structure/9cf5.pdb
sabdab_dataset/9cf5/structure/chothia/9cf5.pdb
false
false
train
9cf6
H
L
0
G
protein
null
germline-targeting hiv-1 gp120 engineered outer domaineodgt8
IMMUNE SYSTEM
06/25/25
Germline-targeting HIV-1 gp120 engineered outer domain eODgt8 in complex with Fab eOD-CL02.1
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Sarkar, A., Stanfield, R.L., Wilson, I.A.
2.7
X-RAY DIFFRACTION
0.306
0.276
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/9cf6/abangle/9cf6.abangle
sabdab_dataset/9cf6/annotation/9cf6_H_VH.ann
sabdab_dataset/9cf6/annotation/9cf6_L_VL.ann
sabdab_dataset/9cf6/imgt/9cf6_H_H.ann
sabdab_dataset/9cf6/imgt/9cf6_L_L.ann
sabdab_dataset/9cf6/sequence/9cf6_raw.pdb
sabdab_dataset/9cf6/sequence/9cf6_H_VH.fa
sabdab_dataset/9cf6/sequence/9cf6_L_VL.fa
sabdab_dataset/9cf6/structure/9cf6.pdb
sabdab_dataset/9cf6/structure/chothia/9cf6.pdb
true
false
train
9cf7
H
L
0
C
protein
null
germline-targeting hiv-1 gp120 engineered outer domaineodgt8
IMMUNE SYSTEM
06/25/25
Germline-targeting HIV-1 gp120 engineered outer domain eODgt8 in complex with Fab eOD-PL01.1
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Sarkar, A., Stanfield, R.L., Wilson, I.A.
3.55
X-RAY DIFFRACTION
0.299
0.265
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cf7/abangle/9cf7.abangle
sabdab_dataset/9cf7/annotation/9cf7_H_VH.ann
sabdab_dataset/9cf7/annotation/9cf7_L_VL.ann
sabdab_dataset/9cf7/imgt/9cf7_H_H.ann
sabdab_dataset/9cf7/imgt/9cf7_L_L.ann
sabdab_dataset/9cf7/sequence/9cf7_raw.pdb
sabdab_dataset/9cf7/sequence/9cf7_H_VH.fa
sabdab_dataset/9cf7/sequence/9cf7_L_VL.fa
sabdab_dataset/9cf7/structure/9cf7.pdb
sabdab_dataset/9cf7/structure/chothia/9cf7.pdb
true
false
train
9cfa
B
A
0
D
protein
null
germline-targeting hiv-1 gp120 engineered outer domaineodgt8
IMMUNE SYSTEM
06/25/25
Germline-targeting HIV-1 gp120 engineered outer domain eODgt8 in complex with Fab eOD-CL04.1
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Sarkar, A., Stanfield, R.L., Wilson, I.A.
3.06
X-RAY DIFFRACTION
0.259
0.224
false
true
IGHV3
IGLV7
Lambda
null
null
null
null
null
sabdab_dataset/9cfa/abangle/9cfa.abangle
sabdab_dataset/9cfa/annotation/9cfa_B_VH.ann
sabdab_dataset/9cfa/annotation/9cfa_A_VL.ann
sabdab_dataset/9cfa/imgt/9cfa_B_H.ann
sabdab_dataset/9cfa/imgt/9cfa_A_L.ann
sabdab_dataset/9cfa/sequence/9cfa_raw.pdb
sabdab_dataset/9cfa/sequence/9cfa_B_VH.fa
sabdab_dataset/9cfa/sequence/9cfa_A_VL.fa
sabdab_dataset/9cfa/structure/9cfa.pdb
sabdab_dataset/9cfa/structure/chothia/9cfa.pdb
true
false
train
9cfa
F
E
0
G
protein
null
germline-targeting hiv-1 gp120 engineered outer domaineodgt8
IMMUNE SYSTEM
06/25/25
Germline-targeting HIV-1 gp120 engineered outer domain eODgt8 in complex with Fab eOD-CL04.1
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Sarkar, A., Stanfield, R.L., Wilson, I.A.
3.06
X-RAY DIFFRACTION
0.259
0.224
false
true
IGHV3
IGLV7
Lambda
null
null
null
null
null
sabdab_dataset/9cfa/abangle/9cfa.abangle
sabdab_dataset/9cfa/annotation/9cfa_F_VH.ann
sabdab_dataset/9cfa/annotation/9cfa_E_VL.ann
sabdab_dataset/9cfa/imgt/9cfa_F_H.ann
sabdab_dataset/9cfa/imgt/9cfa_E_L.ann
sabdab_dataset/9cfa/sequence/9cfa_raw.pdb
sabdab_dataset/9cfa/sequence/9cfa_F_VH.fa
sabdab_dataset/9cfa/sequence/9cfa_E_VL.fa
sabdab_dataset/9cfa/structure/9cfa.pdb
sabdab_dataset/9cfa/structure/chothia/9cfa.pdb
true
false
test
9cfa
H
L
0
C
protein
null
germline-targeting hiv-1 gp120 engineered outer domaineodgt8
IMMUNE SYSTEM
06/25/25
Germline-targeting HIV-1 gp120 engineered outer domain eODgt8 in complex with Fab eOD-CL04.1
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Sarkar, A., Stanfield, R.L., Wilson, I.A.
3.06
X-RAY DIFFRACTION
0.259
0.224
false
true
IGHV3
IGLV7
Lambda
null
null
null
null
null
sabdab_dataset/9cfa/abangle/9cfa.abangle
sabdab_dataset/9cfa/annotation/9cfa_H_VH.ann
sabdab_dataset/9cfa/annotation/9cfa_L_VL.ann
sabdab_dataset/9cfa/imgt/9cfa_H_H.ann
sabdab_dataset/9cfa/imgt/9cfa_L_L.ann
sabdab_dataset/9cfa/sequence/9cfa_raw.pdb
sabdab_dataset/9cfa/sequence/9cfa_H_VH.fa
sabdab_dataset/9cfa/sequence/9cfa_L_VL.fa
sabdab_dataset/9cfa/structure/9cfa.pdb
sabdab_dataset/9cfa/structure/chothia/9cfa.pdb
true
false
train
9cfd
H
L
0
P
peptide
null
outer surface protein c
IMMUNE SYSTEM
08/27/25
Fab 8C1 in complex with OspCA peptide P15 (residues 132-146)
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
borreliella burgdorferi b31
Rudolph, M.J., Mantis, N.
1.64
X-RAY DIFFRACTION
0.189
0.161
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cfd/abangle/9cfd.abangle
sabdab_dataset/9cfd/annotation/9cfd_H_VH.ann
sabdab_dataset/9cfd/annotation/9cfd_L_VL.ann
sabdab_dataset/9cfd/imgt/9cfd_H_H.ann
sabdab_dataset/9cfd/imgt/9cfd_L_L.ann
sabdab_dataset/9cfd/sequence/9cfd_raw.pdb
sabdab_dataset/9cfd/sequence/9cfd_H_VH.fa
sabdab_dataset/9cfd/sequence/9cfd_L_VL.fa
sabdab_dataset/9cfd/structure/9cfd.pdb
sabdab_dataset/9cfd/structure/chothia/9cfd.pdb
false
false
train
9cfe
A
B
0
C
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/02/25
Cryo-EM Local Refinement of Antibody 19-77 in complex with prefusion SARS-CoV-2 Spike glycoprotein RBD
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Casner, R.G., Shapiro, L.
3.03
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cfe/abangle/9cfe.abangle
sabdab_dataset/9cfe/annotation/9cfe_A_VH.ann
sabdab_dataset/9cfe/annotation/9cfe_B_VL.ann
sabdab_dataset/9cfe/imgt/9cfe_A_H.ann
sabdab_dataset/9cfe/imgt/9cfe_B_L.ann
sabdab_dataset/9cfe/sequence/9cfe_raw.pdb
sabdab_dataset/9cfe/sequence/9cfe_A_VH.fa
sabdab_dataset/9cfe/sequence/9cfe_B_VL.fa
sabdab_dataset/9cfe/structure/9cfe.pdb
sabdab_dataset/9cfe/structure/chothia/9cfe.pdb
false
false
train
9cff
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/02/25
Cryo-EM Refinement of Antibody 19-77 in complex with SARS-CoV-2 HK.3 RBD
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Casner, R.G., Shapiro, L.
3.0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cff/abangle/9cff.abangle
sabdab_dataset/9cff/annotation/9cff_H_VH.ann
sabdab_dataset/9cff/annotation/9cff_L_VL.ann
sabdab_dataset/9cff/imgt/9cff_H_H.ann
sabdab_dataset/9cff/imgt/9cff_L_L.ann
sabdab_dataset/9cff/sequence/9cff_raw.pdb
sabdab_dataset/9cff/sequence/9cff_H_VH.fa
sabdab_dataset/9cff/sequence/9cff_L_VL.fa
sabdab_dataset/9cff/structure/9cff.pdb
sabdab_dataset/9cff/structure/chothia/9cff.pdb
false
false
validation
9cfg
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/02/25
Cryo-EM Refinement of Antibody 19-77 R71V in complex with SARS-CoV-2 HK.3 RBD
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Casner, R.G., Shapiro, L.
2.9
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cfg/abangle/9cfg.abangle
sabdab_dataset/9cfg/annotation/9cfg_H_VH.ann
sabdab_dataset/9cfg/annotation/9cfg_L_VL.ann
sabdab_dataset/9cfg/imgt/9cfg_H_H.ann
sabdab_dataset/9cfg/imgt/9cfg_L_L.ann
sabdab_dataset/9cfg/sequence/9cfg_raw.pdb
sabdab_dataset/9cfg/sequence/9cfg_H_VH.fa
sabdab_dataset/9cfg/sequence/9cfg_L_VL.fa
sabdab_dataset/9cfg/structure/9cfg.pdb
sabdab_dataset/9cfg/structure/chothia/9cfg.pdb
false
false
test
9cfh
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/02/25
Cryo-EM Refinement of Antibody 19-77 R71V in complex with SARS-CoV-2 JD.1.1 RBD
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Casner, R.G., Shapiro, L.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cfh/abangle/9cfh.abangle
sabdab_dataset/9cfh/annotation/9cfh_H_VH.ann
sabdab_dataset/9cfh/annotation/9cfh_L_VL.ann
sabdab_dataset/9cfh/imgt/9cfh_H_H.ann
sabdab_dataset/9cfh/imgt/9cfh_L_L.ann
sabdab_dataset/9cfh/sequence/9cfh_raw.pdb
sabdab_dataset/9cfh/sequence/9cfh_H_VH.fa
sabdab_dataset/9cfh/sequence/9cfh_L_VL.fa
sabdab_dataset/9cfh/structure/9cfh.pdb
sabdab_dataset/9cfh/structure/chothia/9cfh.pdb
false
false
test
9cia
B
A
0
e
protein
null
unknown
IMMUNE SYSTEM
07/31/24
T cell receptor complex
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Gully, B.S., Rossjohn, J.
3.39
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV10
Kappa
null
null
null
null
null
sabdab_dataset/9cia/abangle/9cia.abangle
sabdab_dataset/9cia/annotation/9cia_B_VH.ann
sabdab_dataset/9cia/annotation/9cia_A_VL.ann
sabdab_dataset/9cia/imgt/9cia_B_H.ann
sabdab_dataset/9cia/imgt/9cia_A_L.ann
sabdab_dataset/9cia/sequence/9cia_raw.pdb
sabdab_dataset/9cia/sequence/9cia_B_VH.fa
sabdab_dataset/9cia/sequence/9cia_A_VL.fa
sabdab_dataset/9cia/structure/9cia.pdb
sabdab_dataset/9cia/structure/chothia/9cia.pdb
false
false
train
9cia
D
C
0
f
protein
null
unknown
IMMUNE SYSTEM
07/31/24
T cell receptor complex
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Gully, B.S., Rossjohn, J.
3.39
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV10
Kappa
null
null
null
null
null
sabdab_dataset/9cia/abangle/9cia.abangle
sabdab_dataset/9cia/annotation/9cia_D_VH.ann
sabdab_dataset/9cia/annotation/9cia_C_VL.ann
sabdab_dataset/9cia/imgt/9cia_D_H.ann
sabdab_dataset/9cia/imgt/9cia_C_L.ann
sabdab_dataset/9cia/sequence/9cia_raw.pdb
sabdab_dataset/9cia/sequence/9cia_D_VH.fa
sabdab_dataset/9cia/sequence/9cia_C_VL.fa
sabdab_dataset/9cia/structure/9cia.pdb
sabdab_dataset/9cia/structure/chothia/9cia.pdb
false
false
train
9cj7
H
L
0
C | B | A
protein | protein | protein
NA | NA | NA
glycoprotein g2 | glycoprotein g2 | glycoprotein g2
VIRAL PROTEIN/IMMUNE SYSTEM
09/25/24
Lineage IV Lassa virus glycoprotein (Josiah) in complex with monoclonal antibody 8.9F
Homo sapiens; Lassa virus Josiah
homo sapiens
homo sapiens
lassa virus josiah | lassa virus josiah | lassa virus josiah
Brouwer, P.J.M., Perrett, H.R., Ward, A.B.
3.0
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/9cj7/abangle/9cj7.abangle
sabdab_dataset/9cj7/annotation/9cj7_H_VH.ann
sabdab_dataset/9cj7/annotation/9cj7_L_VL.ann
sabdab_dataset/9cj7/imgt/9cj7_H_H.ann
sabdab_dataset/9cj7/imgt/9cj7_L_L.ann
sabdab_dataset/9cj7/sequence/9cj7_raw.pdb
sabdab_dataset/9cj7/sequence/9cj7_H_VH.fa
sabdab_dataset/9cj7/sequence/9cj7_L_VL.fa
sabdab_dataset/9cj7/structure/9cj7.pdb
sabdab_dataset/9cj7/structure/chothia/9cj7.pdb
false
false
train
9cjy
G
I
0
D | C
protein | protein
NA | NA
hemagglutinin ha2 chain | hemagglutinin ha1 chain
VIRAL PROTEIN
07/09/25
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Influenza A virus; Macaca fascicularis
macaca fascicularis
macaca fascicularis
influenza a virus | influenza a virus
Li, N., Tsybovsky, Y., Sangesland, M., Kanekiyo, M.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cjy/abangle/9cjy.abangle
sabdab_dataset/9cjy/annotation/9cjy_G_VH.ann
sabdab_dataset/9cjy/annotation/9cjy_I_VL.ann
sabdab_dataset/9cjy/imgt/9cjy_G_H.ann
sabdab_dataset/9cjy/imgt/9cjy_I_L.ann
sabdab_dataset/9cjy/sequence/9cjy_raw.pdb
sabdab_dataset/9cjy/sequence/9cjy_G_VH.fa
sabdab_dataset/9cjy/sequence/9cjy_I_VL.fa
sabdab_dataset/9cjy/structure/9cjy.pdb
sabdab_dataset/9cjy/structure/chothia/9cjy.pdb
false
false
train
9cjy
H
L
0
B | A
protein | protein
NA | NA
hemagglutinin ha2 chain | hemagglutinin ha1 chain
VIRAL PROTEIN
07/09/25
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Influenza A virus; Macaca fascicularis
macaca fascicularis
macaca fascicularis
influenza a virus | influenza a virus
Li, N., Tsybovsky, Y., Sangesland, M., Kanekiyo, M.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cjy/abangle/9cjy.abangle
sabdab_dataset/9cjy/annotation/9cjy_H_VH.ann
sabdab_dataset/9cjy/annotation/9cjy_L_VL.ann
sabdab_dataset/9cjy/imgt/9cjy_H_H.ann
sabdab_dataset/9cjy/imgt/9cjy_L_L.ann
sabdab_dataset/9cjy/sequence/9cjy_raw.pdb
sabdab_dataset/9cjy/sequence/9cjy_H_VH.fa
sabdab_dataset/9cjy/sequence/9cjy_L_VL.fa
sabdab_dataset/9cjy/structure/9cjy.pdb
sabdab_dataset/9cjy/structure/chothia/9cjy.pdb
false
false
validation
9cjy
J
K
0
F | E
protein | protein
NA | NA
hemagglutinin ha2 chain | hemagglutinin ha1 chain
VIRAL PROTEIN
07/09/25
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Influenza A virus; Macaca fascicularis
macaca fascicularis
macaca fascicularis
influenza a virus | influenza a virus
Li, N., Tsybovsky, Y., Sangesland, M., Kanekiyo, M.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cjy/abangle/9cjy.abangle
sabdab_dataset/9cjy/annotation/9cjy_J_VH.ann
sabdab_dataset/9cjy/annotation/9cjy_K_VL.ann
sabdab_dataset/9cjy/imgt/9cjy_J_H.ann
sabdab_dataset/9cjy/imgt/9cjy_K_L.ann
sabdab_dataset/9cjy/sequence/9cjy_raw.pdb
sabdab_dataset/9cjy/sequence/9cjy_J_VH.fa
sabdab_dataset/9cjy/sequence/9cjy_K_VL.fa
sabdab_dataset/9cjy/structure/9cjy.pdb
sabdab_dataset/9cjy/structure/chothia/9cjy.pdb
false
false
train
9cjz
H
L
0
B | A
protein | protein
NA | NA
hemagglutinin ha2 chain | hemagglutinin ha1 chain
VIRAL PROTEIN
07/09/25
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Influenza A virus; Macaca fascicularis
macaca fascicularis
macaca fascicularis
influenza a virus | influenza a virus
Li, N., Tsybovsky, Y., Sangesland, M., Kanekiyo, M.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cjz/abangle/9cjz.abangle
sabdab_dataset/9cjz/annotation/9cjz_H_VH.ann
sabdab_dataset/9cjz/annotation/9cjz_L_VL.ann
sabdab_dataset/9cjz/imgt/9cjz_H_H.ann
sabdab_dataset/9cjz/imgt/9cjz_L_L.ann
sabdab_dataset/9cjz/sequence/9cjz_raw.pdb
sabdab_dataset/9cjz/sequence/9cjz_H_VH.fa
sabdab_dataset/9cjz/sequence/9cjz_L_VL.fa
sabdab_dataset/9cjz/structure/9cjz.pdb
sabdab_dataset/9cjz/structure/chothia/9cjz.pdb
false
false
train
9cjz
J
K
0
D | C
protein | protein
NA | NA
hemagglutinin ha2 chain | hemagglutinin ha1 chain
VIRAL PROTEIN
07/09/25
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Influenza A virus; Macaca fascicularis
macaca fascicularis
macaca fascicularis
influenza a virus | influenza a virus
Li, N., Tsybovsky, Y., Sangesland, M., Kanekiyo, M.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cjz/abangle/9cjz.abangle
sabdab_dataset/9cjz/annotation/9cjz_J_VH.ann
sabdab_dataset/9cjz/annotation/9cjz_K_VL.ann
sabdab_dataset/9cjz/imgt/9cjz_J_H.ann
sabdab_dataset/9cjz/imgt/9cjz_K_L.ann
sabdab_dataset/9cjz/sequence/9cjz_raw.pdb
sabdab_dataset/9cjz/sequence/9cjz_J_VH.fa
sabdab_dataset/9cjz/sequence/9cjz_K_VL.fa
sabdab_dataset/9cjz/structure/9cjz.pdb
sabdab_dataset/9cjz/structure/chothia/9cjz.pdb
false
false
train
9cjz
M
N
0
F | E
protein | protein
NA | NA
hemagglutinin ha2 chain | hemagglutinin ha1 chain
VIRAL PROTEIN
07/09/25
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Influenza A virus; Macaca fascicularis
macaca fascicularis
macaca fascicularis
influenza a virus | influenza a virus
Li, N., Tsybovsky, Y., Sangesland, M., Kanekiyo, M.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/9cjz/abangle/9cjz.abangle
sabdab_dataset/9cjz/annotation/9cjz_M_VH.ann
sabdab_dataset/9cjz/annotation/9cjz_N_VL.ann
sabdab_dataset/9cjz/imgt/9cjz_M_H.ann
sabdab_dataset/9cjz/imgt/9cjz_N_L.ann
sabdab_dataset/9cjz/sequence/9cjz_raw.pdb
sabdab_dataset/9cjz/sequence/9cjz_M_VH.fa
sabdab_dataset/9cjz/sequence/9cjz_N_VL.fa
sabdab_dataset/9cjz/structure/9cjz.pdb
sabdab_dataset/9cjz/structure/chothia/9cjz.pdb
false
false
train
9ck4
A
B
0
W
protein
null
l9 epitope scaffold
IMMUNE SYSTEM
01/21/26
L9 epitope scaffold complexed with L9 Fabs
Homo sapiens; Plasmodium falciparum 3D7
homo sapiens
homo sapiens
plasmodium falciparum 3d7
Raghavan, S.S.R., Lee, W.H., Ward, A.B.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9ck4/abangle/9ck4.abangle
sabdab_dataset/9ck4/annotation/9ck4_A_VH.ann
sabdab_dataset/9ck4/annotation/9ck4_B_VL.ann
sabdab_dataset/9ck4/imgt/9ck4_A_H.ann
sabdab_dataset/9ck4/imgt/9ck4_B_L.ann
sabdab_dataset/9ck4/sequence/9ck4_raw.pdb
sabdab_dataset/9ck4/sequence/9ck4_A_VH.fa
sabdab_dataset/9ck4/sequence/9ck4_B_VL.fa
sabdab_dataset/9ck4/structure/9ck4.pdb
sabdab_dataset/9ck4/structure/chothia/9ck4.pdb
false
false
train
9ck4
C
D
0
W
protein
null
l9 epitope scaffold
IMMUNE SYSTEM
01/21/26
L9 epitope scaffold complexed with L9 Fabs
Homo sapiens; Plasmodium falciparum 3D7
homo sapiens
homo sapiens
plasmodium falciparum 3d7
Raghavan, S.S.R., Lee, W.H., Ward, A.B.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9ck4/abangle/9ck4.abangle
sabdab_dataset/9ck4/annotation/9ck4_C_VH.ann
sabdab_dataset/9ck4/annotation/9ck4_D_VL.ann
sabdab_dataset/9ck4/imgt/9ck4_C_H.ann
sabdab_dataset/9ck4/imgt/9ck4_D_L.ann
sabdab_dataset/9ck4/sequence/9ck4_raw.pdb
sabdab_dataset/9ck4/sequence/9ck4_C_VH.fa
sabdab_dataset/9ck4/sequence/9ck4_D_VL.fa
sabdab_dataset/9ck4/structure/9ck4.pdb
sabdab_dataset/9ck4/structure/chothia/9ck4.pdb
false
false
train
9ck4
E
F
0
W
protein
null
l9 epitope scaffold
IMMUNE SYSTEM
01/21/26
L9 epitope scaffold complexed with L9 Fabs
Homo sapiens; Plasmodium falciparum 3D7
homo sapiens
homo sapiens
plasmodium falciparum 3d7
Raghavan, S.S.R., Lee, W.H., Ward, A.B.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9ck4/abangle/9ck4.abangle
sabdab_dataset/9ck4/annotation/9ck4_E_VH.ann
sabdab_dataset/9ck4/annotation/9ck4_F_VL.ann
sabdab_dataset/9ck4/imgt/9ck4_E_H.ann
sabdab_dataset/9ck4/imgt/9ck4_F_L.ann
sabdab_dataset/9ck4/sequence/9ck4_raw.pdb
sabdab_dataset/9ck4/sequence/9ck4_E_VH.fa
sabdab_dataset/9ck4/sequence/9ck4_F_VL.fa
sabdab_dataset/9ck4/structure/9ck4.pdb
sabdab_dataset/9ck4/structure/chothia/9ck4.pdb
false
false
train
9clp
H
L
0
A
protein
null
zinc metalloproteinase-disintegrin-like ecarin
HYDROLASE
09/11/24
Structure of ecarin from the venom of Kenyan saw-scaled viper in complex with the Fab of neutralizing antibody H11
Echis carinatus; Homo sapiens
homo sapiens
homo sapiens
echis carinatus
Mindrebo, J.T., Lander, G.C.
3.43
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/9clp/abangle/9clp.abangle
sabdab_dataset/9clp/annotation/9clp_H_VH.ann
sabdab_dataset/9clp/annotation/9clp_L_VL.ann
sabdab_dataset/9clp/imgt/9clp_H_H.ann
sabdab_dataset/9clp/imgt/9clp_L_L.ann
sabdab_dataset/9clp/sequence/9clp_raw.pdb
sabdab_dataset/9clp/sequence/9clp_H_VH.fa
sabdab_dataset/9clp/sequence/9clp_L_VL.fa
sabdab_dataset/9clp/structure/9clp.pdb
sabdab_dataset/9clp/structure/chothia/9clp.pdb
false
false
train
9cm4
A
B
0
G
nucleic-acid
null
hcv2 rna loop
RNA binding protein/RNA
01/14/26
HCV2 Fab bound to selected RNA loop
Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
synthetic construct
Disare, M.T., Lewicka, A., Piccirilli, J.A.
1.82
X-RAY DIFFRACTION
0.198
0.16
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cm4/abangle/9cm4.abangle
sabdab_dataset/9cm4/annotation/9cm4_A_VH.ann
sabdab_dataset/9cm4/annotation/9cm4_B_VL.ann
sabdab_dataset/9cm4/imgt/9cm4_A_H.ann
sabdab_dataset/9cm4/imgt/9cm4_B_L.ann
sabdab_dataset/9cm4/sequence/9cm4_raw.pdb
sabdab_dataset/9cm4/sequence/9cm4_A_VH.fa
sabdab_dataset/9cm4/sequence/9cm4_B_VL.fa
sabdab_dataset/9cm4/structure/9cm4.pdb
sabdab_dataset/9cm4/structure/chothia/9cm4.pdb
false
false
validation
9cm4
H
L
0
J
nucleic-acid
null
hcv2 rna loop
RNA binding protein/RNA
01/14/26
HCV2 Fab bound to selected RNA loop
Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
synthetic construct
Disare, M.T., Lewicka, A., Piccirilli, J.A.
1.82
X-RAY DIFFRACTION
0.198
0.16
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cm4/abangle/9cm4.abangle
sabdab_dataset/9cm4/annotation/9cm4_H_VH.ann
sabdab_dataset/9cm4/annotation/9cm4_L_VL.ann
sabdab_dataset/9cm4/imgt/9cm4_H_H.ann
sabdab_dataset/9cm4/imgt/9cm4_L_L.ann
sabdab_dataset/9cm4/sequence/9cm4_raw.pdb
sabdab_dataset/9cm4/sequence/9cm4_H_VH.fa
sabdab_dataset/9cm4/sequence/9cm4_L_VL.fa
sabdab_dataset/9cm4/structure/9cm4.pdb
sabdab_dataset/9cm4/structure/chothia/9cm4.pdb
false
false
train
9cmc
A
B
0
E
protein
null
ara h 2 allergen
ALLERGEN
06/11/25
Crystal structure of the peanut allergen Ara h 2 with two human derived Fab antibodies 22S1 and 23P34
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Pedersen, L.C., Mueller, G.A., Min, J.
2.95
X-RAY DIFFRACTION
0.253
0.213
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/9cmc/abangle/9cmc.abangle
sabdab_dataset/9cmc/annotation/9cmc_A_VH.ann
sabdab_dataset/9cmc/annotation/9cmc_B_VL.ann
sabdab_dataset/9cmc/imgt/9cmc_A_H.ann
sabdab_dataset/9cmc/imgt/9cmc_B_L.ann
sabdab_dataset/9cmc/sequence/9cmc_raw.pdb
sabdab_dataset/9cmc/sequence/9cmc_A_VH.fa
sabdab_dataset/9cmc/sequence/9cmc_B_VL.fa
sabdab_dataset/9cmc/structure/9cmc.pdb
sabdab_dataset/9cmc/structure/chothia/9cmc.pdb
true
false
train
9cmc
C
D
0
E
protein
null
ara h 2 allergen
ALLERGEN
06/11/25
Crystal structure of the peanut allergen Ara h 2 with two human derived Fab antibodies 22S1 and 23P34
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Pedersen, L.C., Mueller, G.A., Min, J.
2.95
X-RAY DIFFRACTION
0.253
0.213
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cmc/abangle/9cmc.abangle
sabdab_dataset/9cmc/annotation/9cmc_C_VH.ann
sabdab_dataset/9cmc/annotation/9cmc_D_VL.ann
sabdab_dataset/9cmc/imgt/9cmc_C_H.ann
sabdab_dataset/9cmc/imgt/9cmc_D_L.ann
sabdab_dataset/9cmc/sequence/9cmc_raw.pdb
sabdab_dataset/9cmc/sequence/9cmc_C_VH.fa
sabdab_dataset/9cmc/sequence/9cmc_D_VL.fa
sabdab_dataset/9cmc/structure/9cmc.pdb
sabdab_dataset/9cmc/structure/chothia/9cmc.pdb
true
false
train
9cmc
F
G
0
J
protein
null
ara h 2 allergen
ALLERGEN
06/11/25
Crystal structure of the peanut allergen Ara h 2 with two human derived Fab antibodies 22S1 and 23P34
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Pedersen, L.C., Mueller, G.A., Min, J.
2.95
X-RAY DIFFRACTION
0.253
0.213
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/9cmc/abangle/9cmc.abangle
sabdab_dataset/9cmc/annotation/9cmc_F_VH.ann
sabdab_dataset/9cmc/annotation/9cmc_G_VL.ann
sabdab_dataset/9cmc/imgt/9cmc_F_H.ann
sabdab_dataset/9cmc/imgt/9cmc_G_L.ann
sabdab_dataset/9cmc/sequence/9cmc_raw.pdb
sabdab_dataset/9cmc/sequence/9cmc_F_VH.fa
sabdab_dataset/9cmc/sequence/9cmc_G_VL.fa
sabdab_dataset/9cmc/structure/9cmc.pdb
sabdab_dataset/9cmc/structure/chothia/9cmc.pdb
true
false
validation
9cmc
H
I
0
J
protein
null
ara h 2 allergen
ALLERGEN
06/11/25
Crystal structure of the peanut allergen Ara h 2 with two human derived Fab antibodies 22S1 and 23P34
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Pedersen, L.C., Mueller, G.A., Min, J.
2.95
X-RAY DIFFRACTION
0.253
0.213
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cmc/abangle/9cmc.abangle
sabdab_dataset/9cmc/annotation/9cmc_H_VH.ann
sabdab_dataset/9cmc/annotation/9cmc_I_VL.ann
sabdab_dataset/9cmc/imgt/9cmc_H_H.ann
sabdab_dataset/9cmc/imgt/9cmc_I_L.ann
sabdab_dataset/9cmc/sequence/9cmc_raw.pdb
sabdab_dataset/9cmc/sequence/9cmc_H_VH.fa
sabdab_dataset/9cmc/sequence/9cmc_I_VL.fa
sabdab_dataset/9cmc/structure/9cmc.pdb
sabdab_dataset/9cmc/structure/chothia/9cmc.pdb
true
false
train
9cmc
K
L
0
O
protein
null
ara h 2 allergen
ALLERGEN
06/11/25
Crystal structure of the peanut allergen Ara h 2 with two human derived Fab antibodies 22S1 and 23P34
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Pedersen, L.C., Mueller, G.A., Min, J.
2.95
X-RAY DIFFRACTION
0.253
0.213
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/9cmc/abangle/9cmc.abangle
sabdab_dataset/9cmc/annotation/9cmc_K_VH.ann
sabdab_dataset/9cmc/annotation/9cmc_L_VL.ann
sabdab_dataset/9cmc/imgt/9cmc_K_H.ann
sabdab_dataset/9cmc/imgt/9cmc_L_L.ann
sabdab_dataset/9cmc/sequence/9cmc_raw.pdb
sabdab_dataset/9cmc/sequence/9cmc_K_VH.fa
sabdab_dataset/9cmc/sequence/9cmc_L_VL.fa
sabdab_dataset/9cmc/structure/9cmc.pdb
sabdab_dataset/9cmc/structure/chothia/9cmc.pdb
true
false
train
9cmc
M
N
0
O
protein
null
ara h 2 allergen
ALLERGEN
06/11/25
Crystal structure of the peanut allergen Ara h 2 with two human derived Fab antibodies 22S1 and 23P34
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Pedersen, L.C., Mueller, G.A., Min, J.
2.95
X-RAY DIFFRACTION
0.253
0.213
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cmc/abangle/9cmc.abangle
sabdab_dataset/9cmc/annotation/9cmc_M_VH.ann
sabdab_dataset/9cmc/annotation/9cmc_N_VL.ann
sabdab_dataset/9cmc/imgt/9cmc_M_H.ann
sabdab_dataset/9cmc/imgt/9cmc_N_L.ann
sabdab_dataset/9cmc/sequence/9cmc_raw.pdb
sabdab_dataset/9cmc/sequence/9cmc_M_VH.fa
sabdab_dataset/9cmc/sequence/9cmc_N_VL.fa
sabdab_dataset/9cmc/structure/9cmc.pdb
sabdab_dataset/9cmc/structure/chothia/9cmc.pdb
true
false
train
9cmc
P
Q
0
T
protein
null
ara h 2 allergen
ALLERGEN
06/11/25
Crystal structure of the peanut allergen Ara h 2 with two human derived Fab antibodies 22S1 and 23P34
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Pedersen, L.C., Mueller, G.A., Min, J.
2.95
X-RAY DIFFRACTION
0.253
0.213
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/9cmc/abangle/9cmc.abangle
sabdab_dataset/9cmc/annotation/9cmc_P_VH.ann
sabdab_dataset/9cmc/annotation/9cmc_Q_VL.ann
sabdab_dataset/9cmc/imgt/9cmc_P_H.ann
sabdab_dataset/9cmc/imgt/9cmc_Q_L.ann
sabdab_dataset/9cmc/sequence/9cmc_raw.pdb
sabdab_dataset/9cmc/sequence/9cmc_P_VH.fa
sabdab_dataset/9cmc/sequence/9cmc_Q_VL.fa
sabdab_dataset/9cmc/structure/9cmc.pdb
sabdab_dataset/9cmc/structure/chothia/9cmc.pdb
true
false
train
9cmc
R
V
0
T
protein
null
ara h 2 allergen
ALLERGEN
06/11/25
Crystal structure of the peanut allergen Ara h 2 with two human derived Fab antibodies 22S1 and 23P34
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Pedersen, L.C., Mueller, G.A., Min, J.
2.95
X-RAY DIFFRACTION
0.253
0.213
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cmc/abangle/9cmc.abangle
sabdab_dataset/9cmc/annotation/9cmc_R_VH.ann
sabdab_dataset/9cmc/annotation/9cmc_V_VL.ann
sabdab_dataset/9cmc/imgt/9cmc_R_H.ann
sabdab_dataset/9cmc/imgt/9cmc_V_L.ann
sabdab_dataset/9cmc/sequence/9cmc_raw.pdb
sabdab_dataset/9cmc/sequence/9cmc_R_VH.fa
sabdab_dataset/9cmc/sequence/9cmc_V_VL.fa
sabdab_dataset/9cmc/structure/9cmc.pdb
sabdab_dataset/9cmc/structure/chothia/9cmc.pdb
true
false
train
9cmi
H
L
0
A | B
protein | protein
NA | NA
claudin-4 | heat-labile enterotoxin b chain
MEMBRANE PROTEIN
08/07/24
Cryo-EM structure of human claudin-4 complex with Clostridium perfringens enterotoxin, sFab COP-1, and Nanobody
Clostridium perfringens; Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens | clostridium perfringens
Vecchio, A.J.
2.83
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/9cmi/abangle/9cmi.abangle
sabdab_dataset/9cmi/annotation/9cmi_H_VH.ann
sabdab_dataset/9cmi/annotation/9cmi_L_VL.ann
sabdab_dataset/9cmi/imgt/9cmi_H_H.ann
sabdab_dataset/9cmi/imgt/9cmi_L_L.ann
sabdab_dataset/9cmi/sequence/9cmi_raw.pdb
sabdab_dataset/9cmi/sequence/9cmi_H_VH.fa
sabdab_dataset/9cmi/sequence/9cmi_L_VL.fa
sabdab_dataset/9cmi/structure/9cmi.pdb
sabdab_dataset/9cmi/structure/chothia/9cmi.pdb
false
false
validation
9cmi
K
null
0
null
null
null
null
MEMBRANE PROTEIN
08/07/24
Cryo-EM structure of human claudin-4 complex with Clostridium perfringens enterotoxin, sFab COP-1, and Nanobody
Clostridium perfringens; Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
null
null
Vecchio, A.J.
2.83
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
sabdab_dataset/9cmi/abangle/9cmi.abangle
sabdab_dataset/9cmi/annotation/9cmi_K_VH.ann
null
sabdab_dataset/9cmi/imgt/9cmi_K_H.ann
null
sabdab_dataset/9cmi/sequence/9cmi_raw.pdb
sabdab_dataset/9cmi/sequence/9cmi_K_VH.fa
null
sabdab_dataset/9cmi/structure/9cmi.pdb
sabdab_dataset/9cmi/structure/chothia/9cmi.pdb
false
false
train
9cn2
B
b
0
A
protein
null
spike protein
VIRAL PROTEIN
12/25/24
Human astrovirus 2 spike bound to neutralizing scFv 4B6
Human astrovirus 2; Mus musculus
mus musculus
null
human astrovirus 2
Lanning, S., DuBois, R.M.
2.67
X-RAY DIFFRACTION
0.259
0.212
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/9cn2/abangle/9cn2.abangle
sabdab_dataset/9cn2/annotation/9cn2_B_VH.ann
sabdab_dataset/9cn2/annotation/9cn2_B_VL.ann
sabdab_dataset/9cn2/imgt/9cn2_B_H.ann
sabdab_dataset/9cn2/imgt/9cn2_B_L.ann
sabdab_dataset/9cn2/sequence/9cn2_raw.pdb
sabdab_dataset/9cn2/sequence/9cn2_B_VH.fa
sabdab_dataset/9cn2/sequence/9cn2_B_VL.fa
sabdab_dataset/9cn2/structure/9cn2.pdb
sabdab_dataset/9cn2/structure/chothia/9cn2.pdb
true
true
train
9co6
D
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
11/20/24
BA.5 spike/Nanosota-9 complex
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Ye, G., Bu, F., Liu, B., Li, F.
3.01
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9co6/annotation/9co6_D_VH.ann
null
sabdab_dataset/9co6/imgt/9co6_D_H.ann
null
sabdab_dataset/9co6/sequence/9co6_raw.pdb
sabdab_dataset/9co6/sequence/9co6_D_VH.fa
null
sabdab_dataset/9co6/structure/9co6.pdb
sabdab_dataset/9co6/structure/chothia/9co6.pdb
false
false
train
9co6
E
null
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
11/20/24
BA.5 spike/Nanosota-9 complex
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Ye, G., Bu, F., Liu, B., Li, F.
3.01
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9co6/annotation/9co6_E_VH.ann
null
sabdab_dataset/9co6/imgt/9co6_E_H.ann
null
sabdab_dataset/9co6/sequence/9co6_raw.pdb
sabdab_dataset/9co6/sequence/9co6_E_VH.fa
null
sabdab_dataset/9co6/structure/9co6.pdb
sabdab_dataset/9co6/structure/chothia/9co6.pdb
false
false
train
9co6
F
null
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
11/20/24
BA.5 spike/Nanosota-9 complex
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Ye, G., Bu, F., Liu, B., Li, F.
3.01
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9co6/annotation/9co6_F_VH.ann
null
sabdab_dataset/9co6/imgt/9co6_F_H.ann
null
sabdab_dataset/9co6/sequence/9co6_raw.pdb
sabdab_dataset/9co6/sequence/9co6_F_VH.fa
null
sabdab_dataset/9co6/structure/9co6.pdb
sabdab_dataset/9co6/structure/chothia/9co6.pdb
false
false
validation
9co7
D
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
11/20/24
Local refinement of BA.5 spike/Nanosota-9 complex
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Ye, G., Bu, F., Liu, B., Li, F.
3.32
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9co7/annotation/9co7_D_VH.ann
null
sabdab_dataset/9co7/imgt/9co7_D_H.ann
null
sabdab_dataset/9co7/sequence/9co7_raw.pdb
sabdab_dataset/9co7/sequence/9co7_D_VH.fa
null
sabdab_dataset/9co7/structure/9co7.pdb
sabdab_dataset/9co7/structure/chothia/9co7.pdb
false
false
train
9co7
E
null
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
11/20/24
Local refinement of BA.5 spike/Nanosota-9 complex
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Ye, G., Bu, F., Liu, B., Li, F.
3.32
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9co7/annotation/9co7_E_VH.ann
null
sabdab_dataset/9co7/imgt/9co7_E_H.ann
null
sabdab_dataset/9co7/sequence/9co7_raw.pdb
sabdab_dataset/9co7/sequence/9co7_E_VH.fa
null
sabdab_dataset/9co7/structure/9co7.pdb
sabdab_dataset/9co7/structure/chothia/9co7.pdb
false
false
train
9co8
D
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
11/20/24
JN.1 spike/Nanosota-9 complex
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Ye, G., Bu, F., Liu, B., Li, F.
2.99
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9co8/annotation/9co8_D_VH.ann
null
sabdab_dataset/9co8/imgt/9co8_D_H.ann
null
sabdab_dataset/9co8/sequence/9co8_raw.pdb
sabdab_dataset/9co8/sequence/9co8_D_VH.fa
null
sabdab_dataset/9co8/structure/9co8.pdb
sabdab_dataset/9co8/structure/chothia/9co8.pdb
false
false
train
9co8
E
null
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
11/20/24
JN.1 spike/Nanosota-9 complex
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Ye, G., Bu, F., Liu, B., Li, F.
2.99
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9co8/annotation/9co8_E_VH.ann
null
sabdab_dataset/9co8/imgt/9co8_E_H.ann
null
sabdab_dataset/9co8/sequence/9co8_raw.pdb
sabdab_dataset/9co8/sequence/9co8_E_VH.fa
null
sabdab_dataset/9co8/structure/9co8.pdb
sabdab_dataset/9co8/structure/chothia/9co8.pdb
false
false
train
9co8
F
null
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
11/20/24
JN.1 spike/Nanosota-9 complex
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Ye, G., Bu, F., Liu, B., Li, F.
2.99
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9co8/annotation/9co8_F_VH.ann
null
sabdab_dataset/9co8/imgt/9co8_F_H.ann
null
sabdab_dataset/9co8/sequence/9co8_raw.pdb
sabdab_dataset/9co8/sequence/9co8_F_VH.fa
null
sabdab_dataset/9co8/structure/9co8.pdb
sabdab_dataset/9co8/structure/chothia/9co8.pdb
false
false
train
9co9
D
null
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
11/20/24
Local refinement of JN.1 spike/Nanosota-9 complex
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Ye, G., Bu, F., Liu, B., Li, F.
3.44
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9co9/annotation/9co9_D_VH.ann
null
sabdab_dataset/9co9/imgt/9co9_D_H.ann
null
sabdab_dataset/9co9/sequence/9co9_raw.pdb
sabdab_dataset/9co9/sequence/9co9_D_VH.fa
null
sabdab_dataset/9co9/structure/9co9.pdb
sabdab_dataset/9co9/structure/chothia/9co9.pdb
false
false
validation
9co9
E
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
11/20/24
Local refinement of JN.1 spike/Nanosota-9 complex
Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Ye, G., Bu, F., Liu, B., Li, F.
3.44
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9co9/annotation/9co9_E_VH.ann
null
sabdab_dataset/9co9/imgt/9co9_E_H.ann
null
sabdab_dataset/9co9/sequence/9co9_raw.pdb
sabdab_dataset/9co9/sequence/9co9_E_VH.fa
null
sabdab_dataset/9co9/structure/9co9.pdb
sabdab_dataset/9co9/structure/chothia/9co9.pdb
false
false
train
9con
E
null
0
C
protein
null
potassium voltage-gated channel subfamily a member 3/mvenusfusion protein,green fluorescent protein
IMMUNE SYSTEM
01/28/26
Human Kv1.3-H451V with A0194009G09 nanobodies conformation 1
Aequorea victoria; Homo sapiens; Lama glama
lama glama
null
homo sapiens, aequorea victoria
Selvakumar, P., Swartz, K.J.
3.06
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9con/annotation/9con_E_VH.ann
null
sabdab_dataset/9con/imgt/9con_E_H.ann
null
sabdab_dataset/9con/sequence/9con_raw.pdb
sabdab_dataset/9con/sequence/9con_E_VH.fa
null
sabdab_dataset/9con/structure/9con.pdb
sabdab_dataset/9con/structure/chothia/9con.pdb
false
false
train
9con
F
null
0
B
protein
null
potassium voltage-gated channel subfamily a member 3/mvenusfusion protein,green fluorescent protein
IMMUNE SYSTEM
01/28/26
Human Kv1.3-H451V with A0194009G09 nanobodies conformation 1
Aequorea victoria; Homo sapiens; Lama glama
lama glama
null
homo sapiens, aequorea victoria
Selvakumar, P., Swartz, K.J.
3.06
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9con/annotation/9con_F_VH.ann
null
sabdab_dataset/9con/imgt/9con_F_H.ann
null
sabdab_dataset/9con/sequence/9con_raw.pdb
sabdab_dataset/9con/sequence/9con_F_VH.fa
null
sabdab_dataset/9con/structure/9con.pdb
sabdab_dataset/9con/structure/chothia/9con.pdb
false
false
train
9con
G
null
0
D
protein
null
potassium voltage-gated channel subfamily a member 3/mvenusfusion protein,green fluorescent protein
IMMUNE SYSTEM
01/28/26
Human Kv1.3-H451V with A0194009G09 nanobodies conformation 1
Aequorea victoria; Homo sapiens; Lama glama
lama glama
null
homo sapiens, aequorea victoria
Selvakumar, P., Swartz, K.J.
3.06
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9con/annotation/9con_G_VH.ann
null
sabdab_dataset/9con/imgt/9con_G_H.ann
null
sabdab_dataset/9con/sequence/9con_raw.pdb
sabdab_dataset/9con/sequence/9con_G_VH.fa
null
sabdab_dataset/9con/structure/9con.pdb
sabdab_dataset/9con/structure/chothia/9con.pdb
false
false
train
9con
H
null
0
A
protein
null
potassium voltage-gated channel subfamily a member 3/mvenusfusion protein,green fluorescent protein
IMMUNE SYSTEM
01/28/26
Human Kv1.3-H451V with A0194009G09 nanobodies conformation 1
Aequorea victoria; Homo sapiens; Lama glama
lama glama
null
homo sapiens, aequorea victoria
Selvakumar, P., Swartz, K.J.
3.06
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/9con/annotation/9con_H_VH.ann
null
sabdab_dataset/9con/imgt/9con_H_H.ann
null
sabdab_dataset/9con/sequence/9con_raw.pdb
sabdab_dataset/9con/sequence/9con_H_VH.fa
null
sabdab_dataset/9con/structure/9con.pdb
sabdab_dataset/9con/structure/chothia/9con.pdb
false
false
train
9cp5
H
L
0
A
protein
null
sodium- and chloride-dependent gaba transporter 3
MEMBRANE PROTEIN
05/07/25
Cryo-EM structure of human GAT3, apo state, inward-open conformation
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens
Yadav, R., Han, G.W., Gati, C.
3.51
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/9cp5/abangle/9cp5.abangle
sabdab_dataset/9cp5/annotation/9cp5_H_VH.ann
sabdab_dataset/9cp5/annotation/9cp5_L_VL.ann
sabdab_dataset/9cp5/imgt/9cp5_H_H.ann
sabdab_dataset/9cp5/imgt/9cp5_L_L.ann
sabdab_dataset/9cp5/sequence/9cp5_raw.pdb
sabdab_dataset/9cp5/sequence/9cp5_H_VH.fa
sabdab_dataset/9cp5/sequence/9cp5_L_VL.fa
sabdab_dataset/9cp5/structure/9cp5.pdb
sabdab_dataset/9cp5/structure/chothia/9cp5.pdb
false
false
train