pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
365 values
r_factor
stringclasses
358 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
abangle
stringlengths
40
40
annotation_H
stringlengths
44
44
annotation_L
stringlengths
44
44
imgt_H
stringlengths
37
37
imgt_L
stringlengths
37
37
sequence_raw
stringlengths
41
41
sequence_H
stringlengths
41
41
sequence_L
stringlengths
41
41
structure
stringlengths
38
38
structure_chothia
stringlengths
46
46
in_nr_set
bool
2 classes
curated_quality_dataset
bool
2 classes
split
stringclasses
3 values
3u46
A
B
0
null
null
null
null
IMMUNE SYSTEM
10/07/11
CH04H/CH02L P212121
HOMO SAPIENS
homo sapiens
homo sapiens
null
Louder, R., Pancera, M., McLellan, J.S., Kwong, P.D.
2.906
X-RAY DIFFRACTION
0.245
0.215
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3u46/abangle/3u46.abangle
sabdab_dataset/3u46/annotation/3u46_A_VH.ann
sabdab_dataset/3u46/annotation/3u46_B_VL.ann
sabdab_dataset/3u46/imgt/3u46_A_H.ann
sabdab_dataset/3u46/imgt/3u46_B_L.ann
sabdab_dataset/3u46/sequence/3u46_raw.pdb
sabdab_dataset/3u46/sequence/3u46_A_VH.fa
sabdab_dataset/3u46/sequence/3u46_B_VL.fa
sabdab_dataset/3u46/structure/3u46.pdb
sabdab_dataset/3u46/structure/chothia/3u46.pdb
true
false
train
3u46
H
L
0
null
null
null
null
IMMUNE SYSTEM
10/07/11
CH04H/CH02L P212121
HOMO SAPIENS
homo sapiens
homo sapiens
null
Louder, R., Pancera, M., McLellan, J.S., Kwong, P.D.
2.906
X-RAY DIFFRACTION
0.245
0.215
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3u46/abangle/3u46.abangle
sabdab_dataset/3u46/annotation/3u46_H_VH.ann
sabdab_dataset/3u46/annotation/3u46_L_VL.ann
sabdab_dataset/3u46/imgt/3u46_H_H.ann
sabdab_dataset/3u46/imgt/3u46_L_L.ann
sabdab_dataset/3u46/sequence/3u46_raw.pdb
sabdab_dataset/3u46/sequence/3u46_H_VH.fa
sabdab_dataset/3u46/sequence/3u46_L_VL.fa
sabdab_dataset/3u46/structure/3u46.pdb
sabdab_dataset/3u46/structure/chothia/3u46.pdb
true
false
validation
3u4b
H
L
0
null
null
null
null
IMMUNE SYSTEM
10/07/11
CH04H/CH02L Fab P4
HOMO SAPIENS
homo sapiens
homo sapiens
null
Pancera, M., Louder, R., Mclellan, J.S., KWong, P.D.
2.893
X-RAY DIFFRACTION
0.268
0.221
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3u4b/abangle/3u4b.abangle
sabdab_dataset/3u4b/annotation/3u4b_H_VH.ann
sabdab_dataset/3u4b/annotation/3u4b_L_VL.ann
sabdab_dataset/3u4b/imgt/3u4b_H_H.ann
sabdab_dataset/3u4b/imgt/3u4b_L_L.ann
sabdab_dataset/3u4b/sequence/3u4b_raw.pdb
sabdab_dataset/3u4b/sequence/3u4b_H_VH.fa
sabdab_dataset/3u4b/sequence/3u4b_L_VL.fa
sabdab_dataset/3u4b/structure/3u4b.pdb
sabdab_dataset/3u4b/structure/chothia/3u4b.pdb
false
false
train
3u4e
A
B
0
J
protein
null
v1v2 region of hiv-1 on 1fd6 scaffold
IMMUNE SYSTEM
10/07/11
Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain CAP45
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Gorman, J., McLellan, J., Pancera, M., Kwong, P.D.
2.185
X-RAY DIFFRACTION
0.234
0.182
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/3u4e/abangle/3u4e.abangle
sabdab_dataset/3u4e/annotation/3u4e_A_VH.ann
sabdab_dataset/3u4e/annotation/3u4e_B_VL.ann
sabdab_dataset/3u4e/imgt/3u4e_A_H.ann
sabdab_dataset/3u4e/imgt/3u4e_B_L.ann
sabdab_dataset/3u4e/sequence/3u4e_raw.pdb
sabdab_dataset/3u4e/sequence/3u4e_A_VH.fa
sabdab_dataset/3u4e/sequence/3u4e_B_VL.fa
sabdab_dataset/3u4e/structure/3u4e.pdb
sabdab_dataset/3u4e/structure/chothia/3u4e.pdb
false
false
test
3u4e
H
L
0
G
protein
null
v1v2 region of hiv-1 on 1fd6 scaffold
IMMUNE SYSTEM
10/07/11
Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain CAP45
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Gorman, J., McLellan, J., Pancera, M., Kwong, P.D.
2.185
X-RAY DIFFRACTION
0.234
0.182
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/3u4e/abangle/3u4e.abangle
sabdab_dataset/3u4e/annotation/3u4e_H_VH.ann
sabdab_dataset/3u4e/annotation/3u4e_L_VL.ann
sabdab_dataset/3u4e/imgt/3u4e_H_H.ann
sabdab_dataset/3u4e/imgt/3u4e_L_L.ann
sabdab_dataset/3u4e/sequence/3u4e_raw.pdb
sabdab_dataset/3u4e/sequence/3u4e_H_VH.fa
sabdab_dataset/3u4e/sequence/3u4e_L_VL.fa
sabdab_dataset/3u4e/structure/3u4e.pdb
sabdab_dataset/3u4e/structure/chothia/3u4e.pdb
false
false
train
3u6r
A
B
0
null
null
null
null
IMMUNE SYSTEM
10/12/11
Three dimensional structure of broadly neutralizing anti - Hepatitis C virus (HCV) glycoprotein E2 single chain FV fragment 1:7
HOMO SAPIENS
homo sapiens
homo sapiens
null
Gilmartin, A.A., Lamp, B., Ruemenapf, T., Persson, A.A., Rey, F.A., Krey, T.
2.67
X-RAY DIFFRACTION
0.232
0.190
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3u6r/abangle/3u6r.abangle
sabdab_dataset/3u6r/annotation/3u6r_A_VH.ann
sabdab_dataset/3u6r/annotation/3u6r_B_VL.ann
sabdab_dataset/3u6r/imgt/3u6r_A_H.ann
sabdab_dataset/3u6r/imgt/3u6r_B_L.ann
sabdab_dataset/3u6r/sequence/3u6r_raw.pdb
sabdab_dataset/3u6r/sequence/3u6r_A_VH.fa
sabdab_dataset/3u6r/sequence/3u6r_B_VL.fa
sabdab_dataset/3u6r/structure/3u6r.pdb
sabdab_dataset/3u6r/structure/chothia/3u6r.pdb
true
false
train
3u6r
H
L
0
null
null
null
null
IMMUNE SYSTEM
10/12/11
Three dimensional structure of broadly neutralizing anti - Hepatitis C virus (HCV) glycoprotein E2 single chain FV fragment 1:7
HOMO SAPIENS
homo sapiens
homo sapiens
null
Gilmartin, A.A., Lamp, B., Ruemenapf, T., Persson, A.A., Rey, F.A., Krey, T.
2.67
X-RAY DIFFRACTION
0.232
0.190
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3u6r/abangle/3u6r.abangle
sabdab_dataset/3u6r/annotation/3u6r_H_VH.ann
sabdab_dataset/3u6r/annotation/3u6r_L_VL.ann
sabdab_dataset/3u6r/imgt/3u6r_H_H.ann
sabdab_dataset/3u6r/imgt/3u6r_L_L.ann
sabdab_dataset/3u6r/sequence/3u6r_raw.pdb
sabdab_dataset/3u6r/sequence/3u6r_H_VH.fa
sabdab_dataset/3u6r/sequence/3u6r_L_VL.fa
sabdab_dataset/3u6r/structure/3u6r.pdb
sabdab_dataset/3u6r/structure/chothia/3u6r.pdb
true
false
train
3u79
null
A
0
null
null
null
null
IMMUNE SYSTEM
10/13/11
AL-103 Y32F Y96F
HOMO SAPIENS
null
homo sapiens
null
DiCostanzo, A.C., Thompson, J.R., Ramirez-Alvarado, M.
1.62
X-RAY DIFFRACTION
0.223
0.169
false
true
null
IGKV1
Kappa
null
null
null
null
null
null
null
sabdab_dataset/3u79/annotation/3u79_A_VL.ann
null
sabdab_dataset/3u79/imgt/3u79_A_L.ann
sabdab_dataset/3u79/sequence/3u79_raw.pdb
null
sabdab_dataset/3u79/sequence/3u79_A_VL.fa
sabdab_dataset/3u79/structure/3u79.pdb
sabdab_dataset/3u79/structure/chothia/3u79.pdb
false
false
train
3u79
null
B
0
null
null
null
null
IMMUNE SYSTEM
10/13/11
AL-103 Y32F Y96F
HOMO SAPIENS
null
homo sapiens
null
DiCostanzo, A.C., Thompson, J.R., Ramirez-Alvarado, M.
1.62
X-RAY DIFFRACTION
0.223
0.169
false
true
null
IGKV1
Kappa
null
null
null
null
null
null
null
sabdab_dataset/3u79/annotation/3u79_B_VL.ann
null
sabdab_dataset/3u79/imgt/3u79_B_L.ann
sabdab_dataset/3u79/sequence/3u79_raw.pdb
null
sabdab_dataset/3u79/sequence/3u79_B_VL.fa
sabdab_dataset/3u79/structure/3u79.pdb
sabdab_dataset/3u79/structure/chothia/3u79.pdb
false
false
train
3u79
null
C
0
null
null
null
null
IMMUNE SYSTEM
10/13/11
AL-103 Y32F Y96F
HOMO SAPIENS
null
homo sapiens
null
DiCostanzo, A.C., Thompson, J.R., Ramirez-Alvarado, M.
1.62
X-RAY DIFFRACTION
0.223
0.169
false
true
null
IGKV1
Kappa
null
null
null
null
null
null
null
sabdab_dataset/3u79/annotation/3u79_C_VL.ann
null
sabdab_dataset/3u79/imgt/3u79_C_L.ann
sabdab_dataset/3u79/sequence/3u79_raw.pdb
null
sabdab_dataset/3u79/sequence/3u79_C_VL.fa
sabdab_dataset/3u79/structure/3u79.pdb
sabdab_dataset/3u79/structure/chothia/3u79.pdb
false
false
train
3u79
null
D
0
null
null
null
null
IMMUNE SYSTEM
10/13/11
AL-103 Y32F Y96F
HOMO SAPIENS
null
homo sapiens
null
DiCostanzo, A.C., Thompson, J.R., Ramirez-Alvarado, M.
1.62
X-RAY DIFFRACTION
0.223
0.169
false
true
null
IGKV1
Kappa
null
null
null
null
null
null
null
sabdab_dataset/3u79/annotation/3u79_D_VL.ann
null
sabdab_dataset/3u79/imgt/3u79_D_L.ann
sabdab_dataset/3u79/sequence/3u79_raw.pdb
null
sabdab_dataset/3u79/sequence/3u79_D_VL.fa
sabdab_dataset/3u79/structure/3u79.pdb
sabdab_dataset/3u79/structure/chothia/3u79.pdb
false
false
test
3u79
null
E
0
null
null
null
null
IMMUNE SYSTEM
10/13/11
AL-103 Y32F Y96F
HOMO SAPIENS
null
homo sapiens
null
DiCostanzo, A.C., Thompson, J.R., Ramirez-Alvarado, M.
1.62
X-RAY DIFFRACTION
0.223
0.169
false
true
null
IGKV1
Kappa
null
null
null
null
null
null
null
sabdab_dataset/3u79/annotation/3u79_E_VL.ann
null
sabdab_dataset/3u79/imgt/3u79_E_L.ann
sabdab_dataset/3u79/sequence/3u79_raw.pdb
null
sabdab_dataset/3u79/sequence/3u79_E_VL.fa
sabdab_dataset/3u79/structure/3u79.pdb
sabdab_dataset/3u79/structure/chothia/3u79.pdb
false
false
train
3u79
null
F
0
null
null
null
null
IMMUNE SYSTEM
10/13/11
AL-103 Y32F Y96F
HOMO SAPIENS
null
homo sapiens
null
DiCostanzo, A.C., Thompson, J.R., Ramirez-Alvarado, M.
1.62
X-RAY DIFFRACTION
0.223
0.169
false
true
null
IGKV1
Kappa
null
null
null
null
null
null
null
sabdab_dataset/3u79/annotation/3u79_F_VL.ann
null
sabdab_dataset/3u79/imgt/3u79_F_L.ann
sabdab_dataset/3u79/sequence/3u79_raw.pdb
null
sabdab_dataset/3u79/sequence/3u79_F_VL.fa
sabdab_dataset/3u79/structure/3u79.pdb
sabdab_dataset/3u79/structure/chothia/3u79.pdb
false
false
train
3u79
null
G
0
null
null
null
null
IMMUNE SYSTEM
10/13/11
AL-103 Y32F Y96F
HOMO SAPIENS
null
homo sapiens
null
DiCostanzo, A.C., Thompson, J.R., Ramirez-Alvarado, M.
1.62
X-RAY DIFFRACTION
0.223
0.169
false
true
null
IGKV1
Kappa
null
null
null
null
null
null
null
sabdab_dataset/3u79/annotation/3u79_G_VL.ann
null
sabdab_dataset/3u79/imgt/3u79_G_L.ann
sabdab_dataset/3u79/sequence/3u79_raw.pdb
null
sabdab_dataset/3u79/sequence/3u79_G_VL.fa
sabdab_dataset/3u79/structure/3u79.pdb
sabdab_dataset/3u79/structure/chothia/3u79.pdb
false
false
train
3u79
null
H
0
null
null
null
null
IMMUNE SYSTEM
10/13/11
AL-103 Y32F Y96F
HOMO SAPIENS
null
homo sapiens
null
DiCostanzo, A.C., Thompson, J.R., Ramirez-Alvarado, M.
1.62
X-RAY DIFFRACTION
0.223
0.169
false
true
null
IGKV1
Kappa
null
null
null
null
null
null
null
sabdab_dataset/3u79/annotation/3u79_H_VL.ann
null
sabdab_dataset/3u79/imgt/3u79_H_L.ann
sabdab_dataset/3u79/sequence/3u79_raw.pdb
null
sabdab_dataset/3u79/sequence/3u79_H_VL.fa
sabdab_dataset/3u79/structure/3u79.pdb
sabdab_dataset/3u79/structure/chothia/3u79.pdb
false
false
train
3u7a
null
A
0
null
null
null
null
IMMUNE SYSTEM
10/13/11
AL-09 Y32F Y96F
HOMO SAPIENS
null
homo sapiens
null
DiCostanzo, A.C., Thompson, J.R., Ramirez-Alvarado, M.
2.0
X-RAY DIFFRACTION
0.232
0.201
false
true
null
IGKV1
Kappa
null
null
null
null
null
null
null
sabdab_dataset/3u7a/annotation/3u7a_A_VL.ann
null
sabdab_dataset/3u7a/imgt/3u7a_A_L.ann
sabdab_dataset/3u7a/sequence/3u7a_raw.pdb
null
sabdab_dataset/3u7a/sequence/3u7a_A_VL.fa
sabdab_dataset/3u7a/structure/3u7a.pdb
sabdab_dataset/3u7a/structure/chothia/3u7a.pdb
true
false
train
3u7w
H
L
0
null
null
null
null
IMMUNE SYSTEM
10/14/11
Crystal structure of NIH45-46 Fab
HOMO SAPIENS
homo sapiens
homo sapiens
null
Diskin, R., Bjorkman, P.J.
2.6
X-RAY DIFFRACTION
0.238
0.184
false
true
unknown
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3u7w/abangle/3u7w.abangle
sabdab_dataset/3u7w/annotation/3u7w_H_VH.ann
sabdab_dataset/3u7w/annotation/3u7w_L_VL.ann
sabdab_dataset/3u7w/imgt/3u7w_H_H.ann
sabdab_dataset/3u7w/imgt/3u7w_L_L.ann
sabdab_dataset/3u7w/sequence/3u7w_raw.pdb
sabdab_dataset/3u7w/sequence/3u7w_H_VH.fa
sabdab_dataset/3u7w/sequence/3u7w_L_VL.fa
sabdab_dataset/3u7w/structure/3u7w.pdb
sabdab_dataset/3u7w/structure/chothia/3u7w.pdb
true
false
train
3u7y
H
L
0
G
protein
null
envelope glycoprotein gp160
VIRAL PROTEIN/IMMUNE SYSTEM
10/14/11
Structure of NIH45-46 Fab in complex with gp120 of 93TH057 HIV
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Diskin, R., Bjorkman, P.J.
2.4478
X-RAY DIFFRACTION
0.256
0.207
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3u7y/abangle/3u7y.abangle
sabdab_dataset/3u7y/annotation/3u7y_H_VH.ann
sabdab_dataset/3u7y/annotation/3u7y_L_VL.ann
sabdab_dataset/3u7y/imgt/3u7y_H_H.ann
sabdab_dataset/3u7y/imgt/3u7y_L_L.ann
sabdab_dataset/3u7y/sequence/3u7y_raw.pdb
sabdab_dataset/3u7y/sequence/3u7y_H_VH.fa
sabdab_dataset/3u7y/sequence/3u7y_L_VL.fa
sabdab_dataset/3u7y/structure/3u7y.pdb
sabdab_dataset/3u7y/structure/chothia/3u7y.pdb
false
false
train
3u9p
H
L
0
D
protein
null
neutrophil gelatinase-associated lipocalin
IMMUNE SYSTEM
10/19/11
Crystal Structure of Murine Siderocalin in Complex with an Fab Fragment
MUS MUSCULUS; RATTUS NORVEGICUS
rattus norvegicus
rattus norvegicus
mus musculus
Correnti, C., Strong, R.K.
2.8
X-RAY DIFFRACTION
0.292
0.219
false
true
IGHV2
IGKV19
Kappa
null
null
null
null
null
sabdab_dataset/3u9p/abangle/3u9p.abangle
sabdab_dataset/3u9p/annotation/3u9p_H_VH.ann
sabdab_dataset/3u9p/annotation/3u9p_L_VL.ann
sabdab_dataset/3u9p/imgt/3u9p_H_H.ann
sabdab_dataset/3u9p/imgt/3u9p_L_L.ann
sabdab_dataset/3u9p/sequence/3u9p_raw.pdb
sabdab_dataset/3u9p/sequence/3u9p_H_VH.fa
sabdab_dataset/3u9p/sequence/3u9p_L_VL.fa
sabdab_dataset/3u9p/structure/3u9p.pdb
sabdab_dataset/3u9p/structure/chothia/3u9p.pdb
true
false
train
3u9p
K
M
0
C
protein
null
neutrophil gelatinase-associated lipocalin
IMMUNE SYSTEM
10/19/11
Crystal Structure of Murine Siderocalin in Complex with an Fab Fragment
MUS MUSCULUS; RATTUS NORVEGICUS
rattus norvegicus
rattus norvegicus
mus musculus
Correnti, C., Strong, R.K.
2.8
X-RAY DIFFRACTION
0.292
0.219
false
true
IGHV2
IGKV19
Kappa
null
null
null
null
null
sabdab_dataset/3u9p/abangle/3u9p.abangle
sabdab_dataset/3u9p/annotation/3u9p_K_VH.ann
sabdab_dataset/3u9p/annotation/3u9p_M_VL.ann
sabdab_dataset/3u9p/imgt/3u9p_K_H.ann
sabdab_dataset/3u9p/imgt/3u9p_M_L.ann
sabdab_dataset/3u9p/sequence/3u9p_raw.pdb
sabdab_dataset/3u9p/sequence/3u9p_K_VH.fa
sabdab_dataset/3u9p/sequence/3u9p_M_VL.fa
sabdab_dataset/3u9p/structure/3u9p.pdb
sabdab_dataset/3u9p/structure/chothia/3u9p.pdb
true
false
train
3u9u
A
B
0
F
protein
null
receptor tyrosine-protein kinase erbb-4
Transferase
10/19/11
Crystal Structure of Extracellular Domain of Human ErbB4/Her4 in complex with the Fab fragment of mAb1479
MUS MUSCULUS; HOMO SAPIENS
mus musculus
mus musculus
homo sapiens
Hollmen, M., Liu, P., Wildiers, H., Reinvall, I., Vandorpe, T., Smeets, A., Deraedt, K., Vahlberg, T., Joensuu, H., Leahy, D.J., Schoffski, P., Elenius, K.
3.42
X-RAY DIFFRACTION
0.272
0.234
false
true
IGHV8
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3u9u/abangle/3u9u.abangle
sabdab_dataset/3u9u/annotation/3u9u_A_VH.ann
sabdab_dataset/3u9u/annotation/3u9u_B_VL.ann
sabdab_dataset/3u9u/imgt/3u9u_A_H.ann
sabdab_dataset/3u9u/imgt/3u9u_B_L.ann
sabdab_dataset/3u9u/sequence/3u9u_raw.pdb
sabdab_dataset/3u9u/sequence/3u9u_A_VH.fa
sabdab_dataset/3u9u/sequence/3u9u_B_VL.fa
sabdab_dataset/3u9u/structure/3u9u.pdb
sabdab_dataset/3u9u/structure/chothia/3u9u.pdb
false
false
train
3u9u
C
D
0
null
null
null
null
Transferase
10/19/11
Crystal Structure of Extracellular Domain of Human ErbB4/Her4 in complex with the Fab fragment of mAb1479
MUS MUSCULUS; HOMO SAPIENS
mus musculus
mus musculus
null
Hollmen, M., Liu, P., Wildiers, H., Reinvall, I., Vandorpe, T., Smeets, A., Deraedt, K., Vahlberg, T., Joensuu, H., Leahy, D.J., Schoffski, P., Elenius, K.
3.42
X-RAY DIFFRACTION
0.272
0.234
false
true
IGHV8
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3u9u/abangle/3u9u.abangle
sabdab_dataset/3u9u/annotation/3u9u_C_VH.ann
sabdab_dataset/3u9u/annotation/3u9u_D_VL.ann
sabdab_dataset/3u9u/imgt/3u9u_C_H.ann
sabdab_dataset/3u9u/imgt/3u9u_D_L.ann
sabdab_dataset/3u9u/sequence/3u9u_raw.pdb
sabdab_dataset/3u9u/sequence/3u9u_C_VH.fa
sabdab_dataset/3u9u/sequence/3u9u_D_VL.fa
sabdab_dataset/3u9u/structure/3u9u.pdb
sabdab_dataset/3u9u/structure/chothia/3u9u.pdb
false
false
train
3uaj
C
D
0
B
protein
null
envelope protein
VIRAL PROTEIN/IMMUNE SYSTEM
10/21/11
Crystal structure of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5H2
DENGUE VIRUS 4; PAN TROGLODYTES
pan troglodytes
pan troglodytes
dengue virus 4
Cockburn, J.J.B., Stura, E.A., Navarro-Sanchez, M.E., Rey, F.A.
3.232
X-RAY DIFFRACTION
0.246
0.241
false
true
IGHV4
IGKV1
Kappa
0
-11.647373
Unknown
null
TBD
sabdab_dataset/3uaj/abangle/3uaj.abangle
sabdab_dataset/3uaj/annotation/3uaj_C_VH.ann
sabdab_dataset/3uaj/annotation/3uaj_D_VL.ann
sabdab_dataset/3uaj/imgt/3uaj_C_H.ann
sabdab_dataset/3uaj/imgt/3uaj_D_L.ann
sabdab_dataset/3uaj/sequence/3uaj_raw.pdb
sabdab_dataset/3uaj/sequence/3uaj_C_VH.fa
sabdab_dataset/3uaj/sequence/3uaj_D_VL.fa
sabdab_dataset/3uaj/structure/3uaj.pdb
sabdab_dataset/3uaj/structure/chothia/3uaj.pdb
false
false
test
3uaj
H
L
0
A
protein
null
envelope protein
VIRAL PROTEIN/IMMUNE SYSTEM
10/21/11
Crystal structure of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5H2
DENGUE VIRUS 4; PAN TROGLODYTES
pan troglodytes
pan troglodytes
dengue virus 4
Cockburn, J.J.B., Stura, E.A., Navarro-Sanchez, M.E., Rey, F.A.
3.232
X-RAY DIFFRACTION
0.246
0.241
false
true
IGHV4
IGKV1
Kappa
0
-11.647373
Unknown
null
TBD
sabdab_dataset/3uaj/abangle/3uaj.abangle
sabdab_dataset/3uaj/annotation/3uaj_H_VH.ann
sabdab_dataset/3uaj/annotation/3uaj_L_VL.ann
sabdab_dataset/3uaj/imgt/3uaj_H_H.ann
sabdab_dataset/3uaj/imgt/3uaj_L_L.ann
sabdab_dataset/3uaj/sequence/3uaj_raw.pdb
sabdab_dataset/3uaj/sequence/3uaj_H_VH.fa
sabdab_dataset/3uaj/sequence/3uaj_L_VL.fa
sabdab_dataset/3uaj/structure/3uaj.pdb
sabdab_dataset/3uaj/structure/chothia/3uaj.pdb
false
false
validation
3ubx
G
I
0
D
protein
null
antigen-presenting glycoprotein cd1d1
IMMUNE SYSTEM
10/25/11
Crystal structure of the mouse CD1d-C20:2-aGalCer-L363 mAb Fab complex
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Yu, E.D., Zajonc, D.M.
3.1
X-RAY DIFFRACTION
0.230
0.202
false
false
IGHV9
IGKV13
Kappa
0
-10.366344
Unknown
null
TBD
sabdab_dataset/3ubx/abangle/3ubx.abangle
sabdab_dataset/3ubx/annotation/3ubx_G_VH.ann
sabdab_dataset/3ubx/annotation/3ubx_I_VL.ann
sabdab_dataset/3ubx/imgt/3ubx_G_H.ann
sabdab_dataset/3ubx/imgt/3ubx_I_L.ann
sabdab_dataset/3ubx/sequence/3ubx_raw.pdb
sabdab_dataset/3ubx/sequence/3ubx_G_VH.fa
sabdab_dataset/3ubx/sequence/3ubx_I_VL.fa
sabdab_dataset/3ubx/structure/3ubx.pdb
sabdab_dataset/3ubx/structure/chothia/3ubx.pdb
true
false
train
3ubx
H
L
0
A
protein
null
antigen-presenting glycoprotein cd1d1
IMMUNE SYSTEM
10/25/11
Crystal structure of the mouse CD1d-C20:2-aGalCer-L363 mAb Fab complex
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Yu, E.D., Zajonc, D.M.
3.1
X-RAY DIFFRACTION
0.230
0.202
false
false
IGHV9
IGKV13
Kappa
0
-10.366344
Unknown
null
TBD
sabdab_dataset/3ubx/abangle/3ubx.abangle
sabdab_dataset/3ubx/annotation/3ubx_H_VH.ann
sabdab_dataset/3ubx/annotation/3ubx_L_VL.ann
sabdab_dataset/3ubx/imgt/3ubx_H_H.ann
sabdab_dataset/3ubx/imgt/3ubx_L_L.ann
sabdab_dataset/3ubx/sequence/3ubx_raw.pdb
sabdab_dataset/3ubx/sequence/3ubx_H_VH.fa
sabdab_dataset/3ubx/sequence/3ubx_L_VL.fa
sabdab_dataset/3ubx/structure/3ubx.pdb
sabdab_dataset/3ubx/structure/chothia/3ubx.pdb
true
false
train
3uc0
H
L
0
A
protein
null
envelope protein
VIRAL PROTEIN/IMMUNE SYSTEM
10/25/11
Crystal structure of domain I of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5H2
DENGUE VIRUS 4; PAN TROGLODYTES
pan troglodytes
pan troglodytes
dengue virus 4
Cockburn, J.J.B., Stura, E.A., Navarro-Sanchez, M.E., Rey, F.A.
2.71
X-RAY DIFFRACTION
0.252
0.220
false
true
IGHV4
IGKV1
Kappa
0
-12.6
Other
37
22139356
sabdab_dataset/3uc0/abangle/3uc0.abangle
sabdab_dataset/3uc0/annotation/3uc0_H_VH.ann
sabdab_dataset/3uc0/annotation/3uc0_L_VL.ann
sabdab_dataset/3uc0/imgt/3uc0_H_H.ann
sabdab_dataset/3uc0/imgt/3uc0_L_L.ann
sabdab_dataset/3uc0/sequence/3uc0_raw.pdb
sabdab_dataset/3uc0/sequence/3uc0_H_VH.fa
sabdab_dataset/3uc0/sequence/3uc0_L_VL.fa
sabdab_dataset/3uc0/structure/3uc0.pdb
sabdab_dataset/3uc0/structure/chothia/3uc0.pdb
true
false
test
3uc0
I
M
0
B
protein
null
envelope protein
VIRAL PROTEIN/IMMUNE SYSTEM
10/25/11
Crystal structure of domain I of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5H2
DENGUE VIRUS 4; PAN TROGLODYTES
pan troglodytes
pan troglodytes
dengue virus 4
Cockburn, J.J.B., Stura, E.A., Navarro-Sanchez, M.E., Rey, F.A.
2.71
X-RAY DIFFRACTION
0.252
0.220
false
true
IGHV4
IGKV1
Kappa
0
-12.6
Other
37
22139356
sabdab_dataset/3uc0/abangle/3uc0.abangle
sabdab_dataset/3uc0/annotation/3uc0_I_VH.ann
sabdab_dataset/3uc0/annotation/3uc0_M_VL.ann
sabdab_dataset/3uc0/imgt/3uc0_I_H.ann
sabdab_dataset/3uc0/imgt/3uc0_M_L.ann
sabdab_dataset/3uc0/sequence/3uc0_raw.pdb
sabdab_dataset/3uc0/sequence/3uc0_I_VH.fa
sabdab_dataset/3uc0/sequence/3uc0_M_VL.fa
sabdab_dataset/3uc0/structure/3uc0.pdb
sabdab_dataset/3uc0/structure/chothia/3uc0.pdb
true
false
validation
3uji
H
L
0
P
peptide
null
envelope glycoprotein gp160
IMMUNE SYSTEM
11/07/11
Crystal structure of anti-HIV-1 V3 Fab 2558 in complex with MN peptide
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
hiv-1 m
Kong, X.P.
1.6
X-RAY DIFFRACTION
0.194
0.161
false
false
IGHV5
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/3uji/abangle/3uji.abangle
sabdab_dataset/3uji/annotation/3uji_H_VH.ann
sabdab_dataset/3uji/annotation/3uji_L_VL.ann
sabdab_dataset/3uji/imgt/3uji_H_H.ann
sabdab_dataset/3uji/imgt/3uji_L_L.ann
sabdab_dataset/3uji/sequence/3uji_raw.pdb
sabdab_dataset/3uji/sequence/3uji_H_VH.fa
sabdab_dataset/3uji/sequence/3uji_L_VL.fa
sabdab_dataset/3uji/structure/3uji.pdb
sabdab_dataset/3uji/structure/chothia/3uji.pdb
true
false
train
3ujj
H
L
0
P
peptide
null
gp120
IMMUNE SYSTEM
11/07/11
Crystal structure of anti-HIV-1 V3 Fab 4025 in complex with Con A peptide
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Kong, X.P., Sampson, J.
2.0
X-RAY DIFFRACTION
0.213
0.177
false
false
IGHV5
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/3ujj/abangle/3ujj.abangle
sabdab_dataset/3ujj/annotation/3ujj_H_VH.ann
sabdab_dataset/3ujj/annotation/3ujj_L_VL.ann
sabdab_dataset/3ujj/imgt/3ujj_H_H.ann
sabdab_dataset/3ujj/imgt/3ujj_L_L.ann
sabdab_dataset/3ujj/sequence/3ujj_raw.pdb
sabdab_dataset/3ujj/sequence/3ujj_H_VH.fa
sabdab_dataset/3ujj/sequence/3ujj_L_VL.fa
sabdab_dataset/3ujj/structure/3ujj.pdb
sabdab_dataset/3ujj/structure/chothia/3ujj.pdb
true
false
train
3ujt
H
L
0
null
null
null
null
IMMUNE SYSTEM
11/08/11
Structure of the Fab fragment of Ab-52, an antibody that binds the O-antigen of Francisella tularensis
MUS MUSCULUS
mus musculus
mus musculus
null
Rynkiewicz, M.J., Lu, Z., Hui, J.H., Sharon, J., Seaton, B.A.
2.1
X-RAY DIFFRACTION
0.220
0.186
false
false
IGHV1
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3ujt/abangle/3ujt.abangle
sabdab_dataset/3ujt/annotation/3ujt_H_VH.ann
sabdab_dataset/3ujt/annotation/3ujt_L_VL.ann
sabdab_dataset/3ujt/imgt/3ujt_H_H.ann
sabdab_dataset/3ujt/imgt/3ujt_L_L.ann
sabdab_dataset/3ujt/sequence/3ujt_raw.pdb
sabdab_dataset/3ujt/sequence/3ujt_H_VH.fa
sabdab_dataset/3ujt/sequence/3ujt_L_VL.fa
sabdab_dataset/3ujt/structure/3ujt.pdb
sabdab_dataset/3ujt/structure/chothia/3ujt.pdb
false
false
validation
3ujt
I
M
0
null
null
null
null
IMMUNE SYSTEM
11/08/11
Structure of the Fab fragment of Ab-52, an antibody that binds the O-antigen of Francisella tularensis
MUS MUSCULUS
mus musculus
mus musculus
null
Rynkiewicz, M.J., Lu, Z., Hui, J.H., Sharon, J., Seaton, B.A.
2.1
X-RAY DIFFRACTION
0.220
0.186
false
false
IGHV1
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3ujt/abangle/3ujt.abangle
sabdab_dataset/3ujt/annotation/3ujt_I_VH.ann
sabdab_dataset/3ujt/annotation/3ujt_M_VL.ann
sabdab_dataset/3ujt/imgt/3ujt_I_H.ann
sabdab_dataset/3ujt/imgt/3ujt_M_L.ann
sabdab_dataset/3ujt/sequence/3ujt_raw.pdb
sabdab_dataset/3ujt/sequence/3ujt_I_VH.fa
sabdab_dataset/3ujt/sequence/3ujt_M_VL.fa
sabdab_dataset/3ujt/structure/3ujt.pdb
sabdab_dataset/3ujt/structure/chothia/3ujt.pdb
false
false
test
3uls
B
A
0
null
null
null
null
IMMUNE SYSTEM
11/11/11
Crystal structure of Fab12
HOMO SAPIENS
homo sapiens
homo sapiens
null
Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.
2.495
X-RAY DIFFRACTION
0.267
0.212
false
true
IGHV6
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/3uls/abangle/3uls.abangle
sabdab_dataset/3uls/annotation/3uls_B_VH.ann
sabdab_dataset/3uls/annotation/3uls_A_VL.ann
sabdab_dataset/3uls/imgt/3uls_B_H.ann
sabdab_dataset/3uls/imgt/3uls_A_L.ann
sabdab_dataset/3uls/sequence/3uls_raw.pdb
sabdab_dataset/3uls/sequence/3uls_B_VH.fa
sabdab_dataset/3uls/sequence/3uls_A_VL.fa
sabdab_dataset/3uls/structure/3uls.pdb
sabdab_dataset/3uls/structure/chothia/3uls.pdb
false
false
train
3uls
H
L
0
null
null
null
null
IMMUNE SYSTEM
11/11/11
Crystal structure of Fab12
HOMO SAPIENS
homo sapiens
homo sapiens
null
Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.
2.495
X-RAY DIFFRACTION
0.267
0.212
false
true
IGHV6
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/3uls/abangle/3uls.abangle
sabdab_dataset/3uls/annotation/3uls_H_VH.ann
sabdab_dataset/3uls/annotation/3uls_L_VL.ann
sabdab_dataset/3uls/imgt/3uls_H_H.ann
sabdab_dataset/3uls/imgt/3uls_L_L.ann
sabdab_dataset/3uls/sequence/3uls_raw.pdb
sabdab_dataset/3uls/sequence/3uls_H_VH.fa
sabdab_dataset/3uls/sequence/3uls_L_VL.fa
sabdab_dataset/3uls/structure/3uls.pdb
sabdab_dataset/3uls/structure/chothia/3uls.pdb
false
false
train
3ulu
D
C
0
A
protein
null
toll-like receptor 3
IMMUNE SYSTEM
11/11/11
Structure of quaternary complex of human TLR3ecd with three Fabs (Form1)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.
3.52
X-RAY DIFFRACTION
0.309
0.268
false
true
IGHV6
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/3ulu/abangle/3ulu.abangle
sabdab_dataset/3ulu/annotation/3ulu_D_VH.ann
sabdab_dataset/3ulu/annotation/3ulu_C_VL.ann
sabdab_dataset/3ulu/imgt/3ulu_D_H.ann
sabdab_dataset/3ulu/imgt/3ulu_C_L.ann
sabdab_dataset/3ulu/sequence/3ulu_raw.pdb
sabdab_dataset/3ulu/sequence/3ulu_D_VH.fa
sabdab_dataset/3ulu/sequence/3ulu_C_VL.fa
sabdab_dataset/3ulu/structure/3ulu.pdb
sabdab_dataset/3ulu/structure/chothia/3ulu.pdb
true
false
train
3ulu
F
E
0
A
protein
null
toll-like receptor 3
IMMUNE SYSTEM
11/11/11
Structure of quaternary complex of human TLR3ecd with three Fabs (Form1)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.
3.52
X-RAY DIFFRACTION
0.309
0.268
false
true
IGHV1
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/3ulu/abangle/3ulu.abangle
sabdab_dataset/3ulu/annotation/3ulu_F_VH.ann
sabdab_dataset/3ulu/annotation/3ulu_E_VL.ann
sabdab_dataset/3ulu/imgt/3ulu_F_H.ann
sabdab_dataset/3ulu/imgt/3ulu_E_L.ann
sabdab_dataset/3ulu/sequence/3ulu_raw.pdb
sabdab_dataset/3ulu/sequence/3ulu_F_VH.fa
sabdab_dataset/3ulu/sequence/3ulu_E_VL.fa
sabdab_dataset/3ulu/structure/3ulu.pdb
sabdab_dataset/3ulu/structure/chothia/3ulu.pdb
true
false
train
3ulu
H
L
0
A
protein
null
toll-like receptor 3
IMMUNE SYSTEM
11/11/11
Structure of quaternary complex of human TLR3ecd with three Fabs (Form1)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.
3.52
X-RAY DIFFRACTION
0.309
0.268
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3ulu/abangle/3ulu.abangle
sabdab_dataset/3ulu/annotation/3ulu_H_VH.ann
sabdab_dataset/3ulu/annotation/3ulu_L_VL.ann
sabdab_dataset/3ulu/imgt/3ulu_H_H.ann
sabdab_dataset/3ulu/imgt/3ulu_L_L.ann
sabdab_dataset/3ulu/sequence/3ulu_raw.pdb
sabdab_dataset/3ulu/sequence/3ulu_H_VH.fa
sabdab_dataset/3ulu/sequence/3ulu_L_VL.fa
sabdab_dataset/3ulu/structure/3ulu.pdb
sabdab_dataset/3ulu/structure/chothia/3ulu.pdb
true
false
train
3ulv
D
C
0
A
protein
null
toll-like receptor 3
IMMUNE SYSTEM
11/11/11
Structure of quaternary complex of human TLR3ecd with three Fabs (Form2)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.
3.522
X-RAY DIFFRACTION
0.253
0.231
false
true
IGHV6
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/3ulv/abangle/3ulv.abangle
sabdab_dataset/3ulv/annotation/3ulv_D_VH.ann
sabdab_dataset/3ulv/annotation/3ulv_C_VL.ann
sabdab_dataset/3ulv/imgt/3ulv_D_H.ann
sabdab_dataset/3ulv/imgt/3ulv_C_L.ann
sabdab_dataset/3ulv/sequence/3ulv_raw.pdb
sabdab_dataset/3ulv/sequence/3ulv_D_VH.fa
sabdab_dataset/3ulv/sequence/3ulv_C_VL.fa
sabdab_dataset/3ulv/structure/3ulv.pdb
sabdab_dataset/3ulv/structure/chothia/3ulv.pdb
false
false
validation
3ulv
F
E
0
A
protein
null
toll-like receptor 3
IMMUNE SYSTEM
11/11/11
Structure of quaternary complex of human TLR3ecd with three Fabs (Form2)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.
3.522
X-RAY DIFFRACTION
0.253
0.231
false
true
IGHV1
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/3ulv/abangle/3ulv.abangle
sabdab_dataset/3ulv/annotation/3ulv_F_VH.ann
sabdab_dataset/3ulv/annotation/3ulv_E_VL.ann
sabdab_dataset/3ulv/imgt/3ulv_F_H.ann
sabdab_dataset/3ulv/imgt/3ulv_E_L.ann
sabdab_dataset/3ulv/sequence/3ulv_raw.pdb
sabdab_dataset/3ulv/sequence/3ulv_F_VH.fa
sabdab_dataset/3ulv/sequence/3ulv_E_VL.fa
sabdab_dataset/3ulv/structure/3ulv.pdb
sabdab_dataset/3ulv/structure/chothia/3ulv.pdb
false
false
train
3ulv
H
L
0
A
protein
null
toll-like receptor 3
IMMUNE SYSTEM
11/11/11
Structure of quaternary complex of human TLR3ecd with three Fabs (Form2)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.
3.522
X-RAY DIFFRACTION
0.253
0.231
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3ulv/abangle/3ulv.abangle
sabdab_dataset/3ulv/annotation/3ulv_H_VH.ann
sabdab_dataset/3ulv/annotation/3ulv_L_VL.ann
sabdab_dataset/3ulv/imgt/3ulv_H_H.ann
sabdab_dataset/3ulv/imgt/3ulv_L_L.ann
sabdab_dataset/3ulv/sequence/3ulv_raw.pdb
sabdab_dataset/3ulv/sequence/3ulv_H_VH.fa
sabdab_dataset/3ulv/sequence/3ulv_L_VL.fa
sabdab_dataset/3ulv/structure/3ulv.pdb
sabdab_dataset/3ulv/structure/chothia/3ulv.pdb
false
false
train
3umt
A
a
0
null
null
null
null
IMMUNE SYSTEM
11/14/11
scFv12, Anti-BclA antibody single chain variable fragment
MUS MUSCULUS
mus musculus
null
null
Pokkuluri, P.R.
1.798
X-RAY DIFFRACTION
0.223
0.175
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/3umt/abangle/3umt.abangle
sabdab_dataset/3umt/annotation/3umt_A_VH.ann
sabdab_dataset/3umt/annotation/3umt_A_VL.ann
sabdab_dataset/3umt/imgt/3umt_A_H.ann
sabdab_dataset/3umt/imgt/3umt_A_L.ann
sabdab_dataset/3umt/sequence/3umt_raw.pdb
sabdab_dataset/3umt/sequence/3umt_A_VH.fa
sabdab_dataset/3umt/sequence/3umt_A_VL.fa
sabdab_dataset/3umt/structure/3umt.pdb
sabdab_dataset/3umt/structure/chothia/3umt.pdb
true
false
test
3uo1
H
L
0
P
peptide
null
h-2 class i histocompatibility antigen, l-d alpha chain
IMMUNE SYSTEM
11/16/11
Structure of a monoclonal antibody complexed with its MHC-I antigen
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
mus musculus
Margulies, D.H., Mage, M.G., Wang, R., Natarajan, K.
1.641
X-RAY DIFFRACTION
0.206
0.185
false
false
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3uo1/abangle/3uo1.abangle
sabdab_dataset/3uo1/annotation/3uo1_H_VH.ann
sabdab_dataset/3uo1/annotation/3uo1_L_VL.ann
sabdab_dataset/3uo1/imgt/3uo1_H_H.ann
sabdab_dataset/3uo1/imgt/3uo1_L_L.ann
sabdab_dataset/3uo1/sequence/3uo1_raw.pdb
sabdab_dataset/3uo1/sequence/3uo1_H_VH.fa
sabdab_dataset/3uo1/sequence/3uo1_L_VL.fa
sabdab_dataset/3uo1/structure/3uo1.pdb
sabdab_dataset/3uo1/structure/chothia/3uo1.pdb
false
false
train
3upa
null
A
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
null
homo sapiens
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
1.8
X-RAY DIFFRACTION
0.283
0.229
false
true
null
IGKV1
Kappa
null
null
null
null
null
null
null
sabdab_dataset/3upa/annotation/3upa_A_VL.ann
null
sabdab_dataset/3upa/imgt/3upa_A_L.ann
sabdab_dataset/3upa/sequence/3upa_raw.pdb
null
sabdab_dataset/3upa/sequence/3upa_A_VL.fa
sabdab_dataset/3upa/structure/3upa.pdb
sabdab_dataset/3upa/structure/chothia/3upa.pdb
false
false
test
3upa
null
B
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
null
homo sapiens
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
1.8
X-RAY DIFFRACTION
0.283
0.229
false
true
null
IGKV1
Kappa
null
null
null
null
null
null
null
sabdab_dataset/3upa/annotation/3upa_B_VL.ann
null
sabdab_dataset/3upa/imgt/3upa_B_L.ann
sabdab_dataset/3upa/sequence/3upa_raw.pdb
null
sabdab_dataset/3upa/sequence/3upa_B_VL.fa
sabdab_dataset/3upa/structure/3upa.pdb
sabdab_dataset/3upa/structure/chothia/3upa.pdb
false
false
train
3upc
A
null
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
homo sapiens
null
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
2.8
X-RAY DIFFRACTION
0.247
0.209
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/3upc/annotation/3upc_A_VH.ann
null
sabdab_dataset/3upc/imgt/3upc_A_H.ann
null
sabdab_dataset/3upc/sequence/3upc_raw.pdb
sabdab_dataset/3upc/sequence/3upc_A_VH.fa
null
sabdab_dataset/3upc/structure/3upc.pdb
sabdab_dataset/3upc/structure/chothia/3upc.pdb
false
false
train
3upc
B
null
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
homo sapiens
null
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
2.8
X-RAY DIFFRACTION
0.247
0.209
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/3upc/annotation/3upc_B_VH.ann
null
sabdab_dataset/3upc/imgt/3upc_B_H.ann
null
sabdab_dataset/3upc/sequence/3upc_raw.pdb
sabdab_dataset/3upc/sequence/3upc_B_VH.fa
null
sabdab_dataset/3upc/structure/3upc.pdb
sabdab_dataset/3upc/structure/chothia/3upc.pdb
false
false
validation
3upc
C
null
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
homo sapiens
null
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
2.8
X-RAY DIFFRACTION
0.247
0.209
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/3upc/annotation/3upc_C_VH.ann
null
sabdab_dataset/3upc/imgt/3upc_C_H.ann
null
sabdab_dataset/3upc/sequence/3upc_raw.pdb
sabdab_dataset/3upc/sequence/3upc_C_VH.fa
null
sabdab_dataset/3upc/structure/3upc.pdb
sabdab_dataset/3upc/structure/chothia/3upc.pdb
false
false
train
3upc
D
null
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
homo sapiens
null
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
2.8
X-RAY DIFFRACTION
0.247
0.209
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/3upc/annotation/3upc_D_VH.ann
null
sabdab_dataset/3upc/imgt/3upc_D_H.ann
null
sabdab_dataset/3upc/sequence/3upc_raw.pdb
sabdab_dataset/3upc/sequence/3upc_D_VH.fa
null
sabdab_dataset/3upc/structure/3upc.pdb
sabdab_dataset/3upc/structure/chothia/3upc.pdb
false
false
train
3upc
E
null
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
homo sapiens
null
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
2.8
X-RAY DIFFRACTION
0.247
0.209
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/3upc/annotation/3upc_E_VH.ann
null
sabdab_dataset/3upc/imgt/3upc_E_H.ann
null
sabdab_dataset/3upc/sequence/3upc_raw.pdb
sabdab_dataset/3upc/sequence/3upc_E_VH.fa
null
sabdab_dataset/3upc/structure/3upc.pdb
sabdab_dataset/3upc/structure/chothia/3upc.pdb
false
false
train
3upc
F
null
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
homo sapiens
null
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
2.8
X-RAY DIFFRACTION
0.247
0.209
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/3upc/annotation/3upc_F_VH.ann
null
sabdab_dataset/3upc/imgt/3upc_F_H.ann
null
sabdab_dataset/3upc/sequence/3upc_raw.pdb
sabdab_dataset/3upc/sequence/3upc_F_VH.fa
null
sabdab_dataset/3upc/structure/3upc.pdb
sabdab_dataset/3upc/structure/chothia/3upc.pdb
false
false
test
3upc
G
null
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
homo sapiens
null
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
2.8
X-RAY DIFFRACTION
0.247
0.209
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/3upc/annotation/3upc_G_VH.ann
null
sabdab_dataset/3upc/imgt/3upc_G_H.ann
null
sabdab_dataset/3upc/sequence/3upc_raw.pdb
sabdab_dataset/3upc/sequence/3upc_G_VH.fa
null
sabdab_dataset/3upc/structure/3upc.pdb
sabdab_dataset/3upc/structure/chothia/3upc.pdb
false
false
validation
3upc
H
null
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
homo sapiens
null
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
2.8
X-RAY DIFFRACTION
0.247
0.209
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/3upc/annotation/3upc_H_VH.ann
null
sabdab_dataset/3upc/imgt/3upc_H_H.ann
null
sabdab_dataset/3upc/sequence/3upc_raw.pdb
sabdab_dataset/3upc/sequence/3upc_H_VH.fa
null
sabdab_dataset/3upc/structure/3upc.pdb
sabdab_dataset/3upc/structure/chothia/3upc.pdb
false
false
train
3upc
I
null
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
homo sapiens
null
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
2.8
X-RAY DIFFRACTION
0.247
0.209
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/3upc/annotation/3upc_I_VH.ann
null
sabdab_dataset/3upc/imgt/3upc_I_H.ann
null
sabdab_dataset/3upc/sequence/3upc_raw.pdb
sabdab_dataset/3upc/sequence/3upc_I_VH.fa
null
sabdab_dataset/3upc/structure/3upc.pdb
sabdab_dataset/3upc/structure/chothia/3upc.pdb
false
false
train
3upc
J
null
0
null
null
null
null
IMMUNE SYSTEM
11/17/11
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
HOMO SAPIENS
homo sapiens
null
null
Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D.
2.8
X-RAY DIFFRACTION
0.247
0.209
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/3upc/annotation/3upc_J_VH.ann
null
sabdab_dataset/3upc/imgt/3upc_J_H.ann
null
sabdab_dataset/3upc/sequence/3upc_raw.pdb
sabdab_dataset/3upc/sequence/3upc_J_VH.fa
null
sabdab_dataset/3upc/structure/3upc.pdb
sabdab_dataset/3upc/structure/chothia/3upc.pdb
false
false
train
3utz
B
A
0
null
null
null
null
IMMUNE SYSTEM
11/27/11
Endogenous-like inhibitory antibodies targeting activated metalloproteinase motifs show therapeutic potential
MUS MUSCULUS
null
null
null
Sela-Passwell, N., Kikkeri, R, Dym, O., Rozenberg, H, Margalit, R, Arad-Yellin, R., Eisenstein, M., Brenner, O., Shoham, T., Danon, T., Shanzer, A., Sagi, I., Israel Structural Proteomics Center (ISPC)
2.18
X-RAY DIFFRACTION
0.288
0.228
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3utz/abangle/3utz.abangle
sabdab_dataset/3utz/annotation/3utz_B_VH.ann
sabdab_dataset/3utz/annotation/3utz_A_VL.ann
sabdab_dataset/3utz/imgt/3utz_B_H.ann
sabdab_dataset/3utz/imgt/3utz_A_L.ann
sabdab_dataset/3utz/sequence/3utz_raw.pdb
sabdab_dataset/3utz/sequence/3utz_B_VH.fa
sabdab_dataset/3utz/sequence/3utz_A_VL.fa
sabdab_dataset/3utz/structure/3utz.pdb
sabdab_dataset/3utz/structure/chothia/3utz.pdb
true
false
validation
3utz
C
D
0
null
null
null
null
IMMUNE SYSTEM
11/27/11
Endogenous-like inhibitory antibodies targeting activated metalloproteinase motifs show therapeutic potential
MUS MUSCULUS
null
null
null
Sela-Passwell, N., Kikkeri, R, Dym, O., Rozenberg, H, Margalit, R, Arad-Yellin, R., Eisenstein, M., Brenner, O., Shoham, T., Danon, T., Shanzer, A., Sagi, I., Israel Structural Proteomics Center (ISPC)
2.18
X-RAY DIFFRACTION
0.288
0.228
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3utz/abangle/3utz.abangle
sabdab_dataset/3utz/annotation/3utz_C_VH.ann
sabdab_dataset/3utz/annotation/3utz_D_VL.ann
sabdab_dataset/3utz/imgt/3utz_C_H.ann
sabdab_dataset/3utz/imgt/3utz_D_L.ann
sabdab_dataset/3utz/sequence/3utz_raw.pdb
sabdab_dataset/3utz/sequence/3utz_C_VH.fa
sabdab_dataset/3utz/sequence/3utz_D_VL.fa
sabdab_dataset/3utz/structure/3utz.pdb
sabdab_dataset/3utz/structure/chothia/3utz.pdb
true
false
train
3utz
F
E
0
null
null
null
null
IMMUNE SYSTEM
11/27/11
Endogenous-like inhibitory antibodies targeting activated metalloproteinase motifs show therapeutic potential
MUS MUSCULUS
null
null
null
Sela-Passwell, N., Kikkeri, R, Dym, O., Rozenberg, H, Margalit, R, Arad-Yellin, R., Eisenstein, M., Brenner, O., Shoham, T., Danon, T., Shanzer, A., Sagi, I., Israel Structural Proteomics Center (ISPC)
2.18
X-RAY DIFFRACTION
0.288
0.228
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3utz/abangle/3utz.abangle
sabdab_dataset/3utz/annotation/3utz_F_VH.ann
sabdab_dataset/3utz/annotation/3utz_E_VL.ann
sabdab_dataset/3utz/imgt/3utz_F_H.ann
sabdab_dataset/3utz/imgt/3utz_E_L.ann
sabdab_dataset/3utz/sequence/3utz_raw.pdb
sabdab_dataset/3utz/sequence/3utz_F_VH.fa
sabdab_dataset/3utz/sequence/3utz_E_VL.fa
sabdab_dataset/3utz/structure/3utz.pdb
sabdab_dataset/3utz/structure/chothia/3utz.pdb
true
false
train
3ux9
B
b
0
A
protein
null
interferon alpha-1/13
CYTOKINE/IMMUNE SYSTEM
12/04/11
Structural insights into a human anti-IFN antibody exerting therapeutic potential for systemic lupus erythematosus
HOMO SAPIENS
homo sapiens
null
homo sapiens
Ouyang, S., Zhao, L.X., Liang, W., Shaw, N., Liu, Z.-J., Liang, M.-F.
2.8
X-RAY DIFFRACTION
0.243
0.183
true
true
unknown
unknown
unknown
0
-12.451018
SPR
null
TBD
sabdab_dataset/3ux9/abangle/3ux9.abangle
sabdab_dataset/3ux9/annotation/3ux9_B_VH.ann
sabdab_dataset/3ux9/annotation/3ux9_B_VL.ann
sabdab_dataset/3ux9/imgt/3ux9_B_H.ann
sabdab_dataset/3ux9/imgt/3ux9_B_L.ann
sabdab_dataset/3ux9/sequence/3ux9_raw.pdb
sabdab_dataset/3ux9/sequence/3ux9_B_VH.fa
sabdab_dataset/3ux9/sequence/3ux9_B_VL.fa
sabdab_dataset/3ux9/structure/3ux9.pdb
sabdab_dataset/3ux9/structure/chothia/3ux9.pdb
true
true
train
3ux9
D
d
0
C
protein
null
interferon alpha-1/13
CYTOKINE/IMMUNE SYSTEM
12/04/11
Structural insights into a human anti-IFN antibody exerting therapeutic potential for systemic lupus erythematosus
HOMO SAPIENS
homo sapiens
null
homo sapiens
Ouyang, S., Zhao, L.X., Liang, W., Shaw, N., Liu, Z.-J., Liang, M.-F.
2.8
X-RAY DIFFRACTION
0.243
0.183
true
true
unknown
unknown
unknown
0
-12.451018
SPR
null
TBD
sabdab_dataset/3ux9/abangle/3ux9.abangle
sabdab_dataset/3ux9/annotation/3ux9_D_VH.ann
sabdab_dataset/3ux9/annotation/3ux9_D_VL.ann
sabdab_dataset/3ux9/imgt/3ux9_D_H.ann
sabdab_dataset/3ux9/imgt/3ux9_D_L.ann
sabdab_dataset/3ux9/sequence/3ux9_raw.pdb
sabdab_dataset/3ux9/sequence/3ux9_D_VH.fa
sabdab_dataset/3ux9/sequence/3ux9_D_VL.fa
sabdab_dataset/3ux9/structure/3ux9.pdb
sabdab_dataset/3ux9/structure/chothia/3ux9.pdb
true
false
train
3uyp
A
a
0
B
protein
null
envelope protein
IMMUNE SYSTEM
12/06/11
Crystal structure of the dengue virus serotype 4 envelope protein domain III in complex with the variable domains of Mab 4E11
MUS MUSCULUS; DENGUE VIRUS 4
mus musculus
null
dengue virus 4
Cockburn, J.J.B., Navarro Sanchez, M.E., Fretes, N., Urvoas, A., Staropoli, I., Kikuti, C.M., Coffey, L.L., Arenzana Seisdedos, F., Bedouelle, H., Rey, F.A.
2.0
X-RAY DIFFRACTION
0.201
0.181
true
true
unknown
unknown
unknown
0.000004
-7.349478
ELISA
null
TBD
sabdab_dataset/3uyp/abangle/3uyp.abangle
sabdab_dataset/3uyp/annotation/3uyp_A_VH.ann
sabdab_dataset/3uyp/annotation/3uyp_A_VL.ann
sabdab_dataset/3uyp/imgt/3uyp_A_H.ann
sabdab_dataset/3uyp/imgt/3uyp_A_L.ann
sabdab_dataset/3uyp/sequence/3uyp_raw.pdb
sabdab_dataset/3uyp/sequence/3uyp_A_VH.fa
sabdab_dataset/3uyp/sequence/3uyp_A_VL.fa
sabdab_dataset/3uyp/structure/3uyp.pdb
sabdab_dataset/3uyp/structure/chothia/3uyp.pdb
true
true
train
3uyr
H
L
0
P
peptide
null
h-2 class i histocompatibility antigen, l-d alpha chain
IMMUNE SYSTEM
12/06/11
Structure of a monoclonal antibody complexed with its MHC-I antigen
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
mus musculus
Margulies, D.H., Mage, M.G., Wang, R., Natarajan, K.
1.7
X-RAY DIFFRACTION
0.226
0.192
false
false
IGHV5
IGKV1
Kappa
0
-9.408095
Unknown
null
TBD
sabdab_dataset/3uyr/abangle/3uyr.abangle
sabdab_dataset/3uyr/annotation/3uyr_H_VH.ann
sabdab_dataset/3uyr/annotation/3uyr_L_VL.ann
sabdab_dataset/3uyr/imgt/3uyr_H_H.ann
sabdab_dataset/3uyr/imgt/3uyr_L_L.ann
sabdab_dataset/3uyr/sequence/3uyr_raw.pdb
sabdab_dataset/3uyr/sequence/3uyr_H_VH.fa
sabdab_dataset/3uyr/sequence/3uyr_L_VL.fa
sabdab_dataset/3uyr/structure/3uyr.pdb
sabdab_dataset/3uyr/structure/chothia/3uyr.pdb
false
false
train
3uze
A
a
0
C
protein
null
envelope protein
IMMUNE SYSTEM
12/07/11
Crystal structure of the dengue virus serotype 3 envelope protein domain III in complex with the variable domains of Mab 4E11
MUS MUSCULUS; DENGUE VIRUS 3
mus musculus
null
dengue virus 3
Cockburn, J.J.B., Navarro Sanchez, M.E., Fretes, N., Urvoas, A., Staropoli, I., Kikuti, C.M., Coffey, L.L., Arenzana Seisdedos, F., Bedouelle, H., Rey, F.A.
2.04
X-RAY DIFFRACTION
0.234
0.218
true
true
unknown
unknown
unknown
0
-11.046162
ELISA
null
TBD
sabdab_dataset/3uze/abangle/3uze.abangle
sabdab_dataset/3uze/annotation/3uze_A_VH.ann
sabdab_dataset/3uze/annotation/3uze_A_VL.ann
sabdab_dataset/3uze/imgt/3uze_A_H.ann
sabdab_dataset/3uze/imgt/3uze_A_L.ann
sabdab_dataset/3uze/sequence/3uze_raw.pdb
sabdab_dataset/3uze/sequence/3uze_A_VH.fa
sabdab_dataset/3uze/sequence/3uze_A_VL.fa
sabdab_dataset/3uze/structure/3uze.pdb
sabdab_dataset/3uze/structure/chothia/3uze.pdb
false
false
train
3uze
B
b
0
D
protein
null
envelope protein
IMMUNE SYSTEM
12/07/11
Crystal structure of the dengue virus serotype 3 envelope protein domain III in complex with the variable domains of Mab 4E11
MUS MUSCULUS; DENGUE VIRUS 3
mus musculus
null
dengue virus 3
Cockburn, J.J.B., Navarro Sanchez, M.E., Fretes, N., Urvoas, A., Staropoli, I., Kikuti, C.M., Coffey, L.L., Arenzana Seisdedos, F., Bedouelle, H., Rey, F.A.
2.04
X-RAY DIFFRACTION
0.234
0.218
true
true
unknown
unknown
unknown
0
-11.046162
ELISA
null
TBD
sabdab_dataset/3uze/abangle/3uze.abangle
sabdab_dataset/3uze/annotation/3uze_B_VH.ann
sabdab_dataset/3uze/annotation/3uze_B_VL.ann
sabdab_dataset/3uze/imgt/3uze_B_H.ann
sabdab_dataset/3uze/imgt/3uze_B_L.ann
sabdab_dataset/3uze/sequence/3uze_raw.pdb
sabdab_dataset/3uze/sequence/3uze_B_VH.fa
sabdab_dataset/3uze/sequence/3uze_B_VL.fa
sabdab_dataset/3uze/structure/3uze.pdb
sabdab_dataset/3uze/structure/chothia/3uze.pdb
false
false
train
3uzq
A
a
0
B
protein
null
envelope protein
IMMUNE SYSTEM
12/07/11
Crystal structure of the dengue virus serotype 1 envelope protein domain III in complex with the variable domains of Mab 4E11
MUS MUSCULUS; DENGUE VIRUS 1
mus musculus
null
dengue virus 1
Cockburn, J.J.B., Navarro Sanchez, M.E., Fretes, N., Urvoas, A., Staropoli, I., Kikuti, C.M., Coffey, L.L., Arenzana Seisdedos, F., Bedouelle, H., Rey, F.A.
1.6
X-RAY DIFFRACTION
0.188
0.176
true
true
unknown
unknown
unknown
0
-13.76002
ELISA
null
TBD
sabdab_dataset/3uzq/abangle/3uzq.abangle
sabdab_dataset/3uzq/annotation/3uzq_A_VH.ann
sabdab_dataset/3uzq/annotation/3uzq_A_VL.ann
sabdab_dataset/3uzq/imgt/3uzq_A_H.ann
sabdab_dataset/3uzq/imgt/3uzq_A_L.ann
sabdab_dataset/3uzq/sequence/3uzq_raw.pdb
sabdab_dataset/3uzq/sequence/3uzq_A_VH.fa
sabdab_dataset/3uzq/sequence/3uzq_A_VL.fa
sabdab_dataset/3uzq/structure/3uzq.pdb
sabdab_dataset/3uzq/structure/chothia/3uzq.pdb
false
false
train
3uzv
B
b
0
A
protein
null
envelope protein
IMMUNE SYSTEM
12/07/11
Crystal structure of the dengue virus serotype 2 envelope protein domain III in complex with the variable domains of Mab 4E11
DENGUE VIRUS 2; MUS MUSCULUS
mus musculus
null
dengue virus 2
Cockburn, J.J.B., Navarro Sanchez, M.E., Fretes, N., Urvoas, A., Staropoli, I., Kikuti, C.M., Coffey, L.L., Arenzana Seisdedos, F., Bedouelle, H., Rey, F.A.
2.1
X-RAY DIFFRACTION
0.214
0.206
true
true
unknown
unknown
unknown
0
-12.778235
ELISA
null
TBD
sabdab_dataset/3uzv/abangle/3uzv.abangle
sabdab_dataset/3uzv/annotation/3uzv_B_VH.ann
sabdab_dataset/3uzv/annotation/3uzv_B_VL.ann
sabdab_dataset/3uzv/imgt/3uzv_B_H.ann
sabdab_dataset/3uzv/imgt/3uzv_B_L.ann
sabdab_dataset/3uzv/sequence/3uzv_raw.pdb
sabdab_dataset/3uzv/sequence/3uzv_B_VH.fa
sabdab_dataset/3uzv/sequence/3uzv_B_VL.fa
sabdab_dataset/3uzv/structure/3uzv.pdb
sabdab_dataset/3uzv/structure/chothia/3uzv.pdb
false
false
train
3v0a
C
null
0
A
protein
null
bont/a
TOXIN
12/07/11
2.7 angstrom crystal structure of BoNT/Ai in complex with NTNHA
CLOSTRIDIUM BOTULINUM; LAMA GLAMA
lama glama
null
clostridium botulinum
Gu, S., Rumpel, S., Zhou, J., Strotmeier, J., Bigalke, H., Perry, K., Shoemaker, C.B., Rummel, A., Jin, R.
2.703
X-RAY DIFFRACTION
0.224
0.176
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/3v0a/annotation/3v0a_C_VH.ann
null
sabdab_dataset/3v0a/imgt/3v0a_C_H.ann
null
sabdab_dataset/3v0a/sequence/3v0a_raw.pdb
sabdab_dataset/3v0a/sequence/3v0a_C_VH.fa
null
sabdab_dataset/3v0a/structure/3v0a.pdb
sabdab_dataset/3v0a/structure/chothia/3v0a.pdb
false
false
train
3v0v
A
B
0
null
null
null
null
IMMUNE SYSTEM
12/08/11
Fab WN1 222-5 unliganded
MUS MUSCULUS
mus musculus
mus musculus
null
Gomery, K., Evans, S.V.
2.13
X-RAY DIFFRACTION
0.284
0.238
false
false
IGHV7
IGKV11
Kappa
null
null
null
null
null
sabdab_dataset/3v0v/abangle/3v0v.abangle
sabdab_dataset/3v0v/annotation/3v0v_A_VH.ann
sabdab_dataset/3v0v/annotation/3v0v_B_VL.ann
sabdab_dataset/3v0v/imgt/3v0v_A_H.ann
sabdab_dataset/3v0v/imgt/3v0v_B_L.ann
sabdab_dataset/3v0v/sequence/3v0v_raw.pdb
sabdab_dataset/3v0v/sequence/3v0v_A_VH.fa
sabdab_dataset/3v0v/sequence/3v0v_B_VL.fa
sabdab_dataset/3v0v/structure/3v0v.pdb
sabdab_dataset/3v0v/structure/chothia/3v0v.pdb
false
false
test
3v0v
H
L
0
null
null
null
null
IMMUNE SYSTEM
12/08/11
Fab WN1 222-5 unliganded
MUS MUSCULUS
mus musculus
mus musculus
null
Gomery, K., Evans, S.V.
2.13
X-RAY DIFFRACTION
0.284
0.238
false
false
IGHV7
IGKV11
Kappa
null
null
null
null
null
sabdab_dataset/3v0v/abangle/3v0v.abangle
sabdab_dataset/3v0v/annotation/3v0v_H_VH.ann
sabdab_dataset/3v0v/annotation/3v0v_L_VL.ann
sabdab_dataset/3v0v/imgt/3v0v_H_H.ann
sabdab_dataset/3v0v/imgt/3v0v_L_L.ann
sabdab_dataset/3v0v/sequence/3v0v_raw.pdb
sabdab_dataset/3v0v/sequence/3v0v_H_VH.fa
sabdab_dataset/3v0v/sequence/3v0v_L_VL.fa
sabdab_dataset/3v0v/structure/3v0v.pdb
sabdab_dataset/3v0v/structure/chothia/3v0v.pdb
false
false
validation
3v0w
H
L
0
H
carbohydrate
KDO
polysaccharide
IMMUNE SYSTEM
12/08/11
Crystal structure of Fab WN1 222-5 in complex with LPS
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Gomery, K., Evans, S.V.
1.73
X-RAY DIFFRACTION
0.231
0.182
false
false
IGHV7
IGKV15
Kappa
null
null
null
null
null
sabdab_dataset/3v0w/abangle/3v0w.abangle
sabdab_dataset/3v0w/annotation/3v0w_H_VH.ann
sabdab_dataset/3v0w/annotation/3v0w_L_VL.ann
sabdab_dataset/3v0w/imgt/3v0w_H_H.ann
sabdab_dataset/3v0w/imgt/3v0w_L_L.ann
sabdab_dataset/3v0w/sequence/3v0w_raw.pdb
sabdab_dataset/3v0w/sequence/3v0w_H_VH.fa
sabdab_dataset/3v0w/sequence/3v0w_L_VL.fa
sabdab_dataset/3v0w/structure/3v0w.pdb
sabdab_dataset/3v0w/structure/chothia/3v0w.pdb
true
false
train
3v4p
H
L
0
B | A
protein | protein
NA | NA
integrin beta-7 | integrin alpha-4
CELL ADHESION
12/15/11
crystal structure of a4b7 headpiece complexed with Fab ACT-1
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens | homo sapiens
Yu, Y., Zhu, J., Springer, T.A.
3.15
X-RAY DIFFRACTION
0.251
0.220
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3v4p/abangle/3v4p.abangle
sabdab_dataset/3v4p/annotation/3v4p_H_VH.ann
sabdab_dataset/3v4p/annotation/3v4p_L_VL.ann
sabdab_dataset/3v4p/imgt/3v4p_H_H.ann
sabdab_dataset/3v4p/imgt/3v4p_L_L.ann
sabdab_dataset/3v4p/sequence/3v4p_raw.pdb
sabdab_dataset/3v4p/sequence/3v4p_H_VH.fa
sabdab_dataset/3v4p/sequence/3v4p_L_VL.fa
sabdab_dataset/3v4p/structure/3v4p.pdb
sabdab_dataset/3v4p/structure/chothia/3v4p.pdb
false
false
train
3v4p
M
N
0
D | C
protein | protein
NA | NA
integrin beta-7 | integrin alpha-4
CELL ADHESION
12/15/11
crystal structure of a4b7 headpiece complexed with Fab ACT-1
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens | homo sapiens
Yu, Y., Zhu, J., Springer, T.A.
3.15
X-RAY DIFFRACTION
0.251
0.220
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3v4p/abangle/3v4p.abangle
sabdab_dataset/3v4p/annotation/3v4p_M_VH.ann
sabdab_dataset/3v4p/annotation/3v4p_N_VL.ann
sabdab_dataset/3v4p/imgt/3v4p_M_H.ann
sabdab_dataset/3v4p/imgt/3v4p_N_L.ann
sabdab_dataset/3v4p/sequence/3v4p_raw.pdb
sabdab_dataset/3v4p/sequence/3v4p_M_VH.fa
sabdab_dataset/3v4p/sequence/3v4p_N_VL.fa
sabdab_dataset/3v4p/structure/3v4p.pdb
sabdab_dataset/3v4p/structure/chothia/3v4p.pdb
false
false
train
3v4u
H
L
0
P
peptide
null
h-2 class i histocompatibility antigen, l-d alpha chain
IMMUNE SYSTEM
12/15/11
Structure of a monoclonal antibody complexed with its MHC-I antigen
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
mus musculus
Margulies, D.H., Mage, M.G., Wang, R., Natarajan, K.
1.64
X-RAY DIFFRACTION
0.251
0.213
false
false
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3v4u/abangle/3v4u.abangle
sabdab_dataset/3v4u/annotation/3v4u_H_VH.ann
sabdab_dataset/3v4u/annotation/3v4u_L_VL.ann
sabdab_dataset/3v4u/imgt/3v4u_H_H.ann
sabdab_dataset/3v4u/imgt/3v4u_L_L.ann
sabdab_dataset/3v4u/sequence/3v4u_raw.pdb
sabdab_dataset/3v4u/sequence/3v4u_H_VH.fa
sabdab_dataset/3v4u/sequence/3v4u_L_VL.fa
sabdab_dataset/3v4u/structure/3v4u.pdb
sabdab_dataset/3v4u/structure/chothia/3v4u.pdb
true
false
train
3v4v
H
L
0
B | A
protein | protein
NA | NA
integrin beta-7 | integrin alpha-4
CELL ADHESION
12/15/11
crystal structure of a4b7 headpiece complexed with Fab ACT-1 and RO0505376
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens | homo sapiens
Yu, Y., Zhu, J., Springer, T.A.
3.1
X-RAY DIFFRACTION
0.231
0.197
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3v4v/abangle/3v4v.abangle
sabdab_dataset/3v4v/annotation/3v4v_H_VH.ann
sabdab_dataset/3v4v/annotation/3v4v_L_VL.ann
sabdab_dataset/3v4v/imgt/3v4v_H_H.ann
sabdab_dataset/3v4v/imgt/3v4v_L_L.ann
sabdab_dataset/3v4v/sequence/3v4v_raw.pdb
sabdab_dataset/3v4v/sequence/3v4v_H_VH.fa
sabdab_dataset/3v4v/sequence/3v4v_L_VL.fa
sabdab_dataset/3v4v/structure/3v4v.pdb
sabdab_dataset/3v4v/structure/chothia/3v4v.pdb
true
false
train
3v4v
M
N
0
D | C
protein | protein
NA | NA
integrin beta-7 | integrin alpha-4
CELL ADHESION
12/15/11
crystal structure of a4b7 headpiece complexed with Fab ACT-1 and RO0505376
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens | homo sapiens
Yu, Y., Zhu, J., Springer, T.A.
3.1
X-RAY DIFFRACTION
0.231
0.197
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3v4v/abangle/3v4v.abangle
sabdab_dataset/3v4v/annotation/3v4v_M_VH.ann
sabdab_dataset/3v4v/annotation/3v4v_N_VL.ann
sabdab_dataset/3v4v/imgt/3v4v_M_H.ann
sabdab_dataset/3v4v/imgt/3v4v_N_L.ann
sabdab_dataset/3v4v/sequence/3v4v_raw.pdb
sabdab_dataset/3v4v/sequence/3v4v_M_VH.fa
sabdab_dataset/3v4v/sequence/3v4v_N_VL.fa
sabdab_dataset/3v4v/structure/3v4v.pdb
sabdab_dataset/3v4v/structure/chothia/3v4v.pdb
true
false
train
3v52
H
L
0
P
peptide
null
h-2 class i histocompatibility antigen, l-d alpha chain
IMMUNE SYSTEM
12/15/11
Structure of a monoclonal antibody complexed with its MHC-I antigen
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
mus musculus
Mage, M.G., Dolan, M.A., Wang, R., Boyd, L.F., Revilleza, M.J., Robinson, H., Natarajan, K., Myers, N.B., Hansen, T.H., Margulies, D.H.
1.697
X-RAY DIFFRACTION
0.227
0.197
false
false
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3v52/abangle/3v52.abangle
sabdab_dataset/3v52/annotation/3v52_H_VH.ann
sabdab_dataset/3v52/annotation/3v52_L_VL.ann
sabdab_dataset/3v52/imgt/3v52_H_H.ann
sabdab_dataset/3v52/imgt/3v52_L_L.ann
sabdab_dataset/3v52/sequence/3v52_raw.pdb
sabdab_dataset/3v52/sequence/3v52_H_VH.fa
sabdab_dataset/3v52/sequence/3v52_L_VL.fa
sabdab_dataset/3v52/structure/3v52.pdb
sabdab_dataset/3v52/structure/chothia/3v52.pdb
false
false
train
3v6f
A
B
0
null
null
null
null
IMMUNE SYSTEM
12/19/11
Crystal Structure of an anti-HBV e-antigen monoclonal Fab fragment (e6), unbound
MUS MUSCULUS
mus musculus
mus musculus
null
Dimattia, M.A., Watts, N.R., Stahl, S.J., Grimes, J.M., Steven, A.C., Stuart, D.I., Wingfield, P.T.
2.52
X-RAY DIFFRACTION
0.220
0.179
false
false
IGHV5
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3v6f/abangle/3v6f.abangle
sabdab_dataset/3v6f/annotation/3v6f_A_VH.ann
sabdab_dataset/3v6f/annotation/3v6f_B_VL.ann
sabdab_dataset/3v6f/imgt/3v6f_A_H.ann
sabdab_dataset/3v6f/imgt/3v6f_B_L.ann
sabdab_dataset/3v6f/sequence/3v6f_raw.pdb
sabdab_dataset/3v6f/sequence/3v6f_A_VH.fa
sabdab_dataset/3v6f/sequence/3v6f_B_VL.fa
sabdab_dataset/3v6f/structure/3v6f.pdb
sabdab_dataset/3v6f/structure/chothia/3v6f.pdb
true
false
train
3v6f
C
D
0
null
null
null
null
IMMUNE SYSTEM
12/19/11
Crystal Structure of an anti-HBV e-antigen monoclonal Fab fragment (e6), unbound
MUS MUSCULUS
mus musculus
mus musculus
null
Dimattia, M.A., Watts, N.R., Stahl, S.J., Grimes, J.M., Steven, A.C., Stuart, D.I., Wingfield, P.T.
2.52
X-RAY DIFFRACTION
0.220
0.179
false
false
IGHV5
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3v6f/abangle/3v6f.abangle
sabdab_dataset/3v6f/annotation/3v6f_C_VH.ann
sabdab_dataset/3v6f/annotation/3v6f_D_VL.ann
sabdab_dataset/3v6f/imgt/3v6f_C_H.ann
sabdab_dataset/3v6f/imgt/3v6f_D_L.ann
sabdab_dataset/3v6f/sequence/3v6f_raw.pdb
sabdab_dataset/3v6f/sequence/3v6f_C_VH.fa
sabdab_dataset/3v6f/sequence/3v6f_D_VL.fa
sabdab_dataset/3v6f/structure/3v6f.pdb
sabdab_dataset/3v6f/structure/chothia/3v6f.pdb
true
false
train
3v6f
E
F
0
null
null
null
null
IMMUNE SYSTEM
12/19/11
Crystal Structure of an anti-HBV e-antigen monoclonal Fab fragment (e6), unbound
MUS MUSCULUS
mus musculus
mus musculus
null
Dimattia, M.A., Watts, N.R., Stahl, S.J., Grimes, J.M., Steven, A.C., Stuart, D.I., Wingfield, P.T.
2.52
X-RAY DIFFRACTION
0.220
0.179
false
false
IGHV5
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3v6f/abangle/3v6f.abangle
sabdab_dataset/3v6f/annotation/3v6f_E_VH.ann
sabdab_dataset/3v6f/annotation/3v6f_F_VL.ann
sabdab_dataset/3v6f/imgt/3v6f_E_H.ann
sabdab_dataset/3v6f/imgt/3v6f_F_L.ann
sabdab_dataset/3v6f/sequence/3v6f_raw.pdb
sabdab_dataset/3v6f/sequence/3v6f_E_VH.fa
sabdab_dataset/3v6f/sequence/3v6f_F_VL.fa
sabdab_dataset/3v6f/structure/3v6f.pdb
sabdab_dataset/3v6f/structure/chothia/3v6f.pdb
true
false
train
3v6f
H
L
0
null
null
null
null
IMMUNE SYSTEM
12/19/11
Crystal Structure of an anti-HBV e-antigen monoclonal Fab fragment (e6), unbound
MUS MUSCULUS
mus musculus
mus musculus
null
Dimattia, M.A., Watts, N.R., Stahl, S.J., Grimes, J.M., Steven, A.C., Stuart, D.I., Wingfield, P.T.
2.52
X-RAY DIFFRACTION
0.220
0.179
false
false
IGHV5
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3v6f/abangle/3v6f.abangle
sabdab_dataset/3v6f/annotation/3v6f_H_VH.ann
sabdab_dataset/3v6f/annotation/3v6f_L_VL.ann
sabdab_dataset/3v6f/imgt/3v6f_H_H.ann
sabdab_dataset/3v6f/imgt/3v6f_L_L.ann
sabdab_dataset/3v6f/sequence/3v6f_raw.pdb
sabdab_dataset/3v6f/sequence/3v6f_H_VH.fa
sabdab_dataset/3v6f/sequence/3v6f_L_VL.fa
sabdab_dataset/3v6f/structure/3v6f.pdb
sabdab_dataset/3v6f/structure/chothia/3v6f.pdb
true
false
test
3v6o
C
E
0
A
protein
null
leptin receptor
IMMUNE SYSTEM
12/20/11
Leptin Receptor-antibody complex
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Carpenter, B., Hemsworth, G.R., Ross, R.J., Artymiuk, P.J.
1.95
X-RAY DIFFRACTION
0.213
0.171
false
false
IGHV2
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/3v6o/abangle/3v6o.abangle
sabdab_dataset/3v6o/annotation/3v6o_C_VH.ann
sabdab_dataset/3v6o/annotation/3v6o_E_VL.ann
sabdab_dataset/3v6o/imgt/3v6o_C_H.ann
sabdab_dataset/3v6o/imgt/3v6o_E_L.ann
sabdab_dataset/3v6o/sequence/3v6o_raw.pdb
sabdab_dataset/3v6o/sequence/3v6o_C_VH.fa
sabdab_dataset/3v6o/sequence/3v6o_E_VL.fa
sabdab_dataset/3v6o/structure/3v6o.pdb
sabdab_dataset/3v6o/structure/chothia/3v6o.pdb
true
false
train
3v6o
D
F
0
B
protein
null
leptin receptor
IMMUNE SYSTEM
12/20/11
Leptin Receptor-antibody complex
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Carpenter, B., Hemsworth, G.R., Ross, R.J., Artymiuk, P.J.
1.95
X-RAY DIFFRACTION
0.213
0.171
false
false
IGHV2
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/3v6o/abangle/3v6o.abangle
sabdab_dataset/3v6o/annotation/3v6o_D_VH.ann
sabdab_dataset/3v6o/annotation/3v6o_F_VL.ann
sabdab_dataset/3v6o/imgt/3v6o_D_H.ann
sabdab_dataset/3v6o/imgt/3v6o_F_L.ann
sabdab_dataset/3v6o/sequence/3v6o_raw.pdb
sabdab_dataset/3v6o/sequence/3v6o_D_VH.fa
sabdab_dataset/3v6o/sequence/3v6o_F_VL.fa
sabdab_dataset/3v6o/structure/3v6o.pdb
sabdab_dataset/3v6o/structure/chothia/3v6o.pdb
true
false
train
3v6z
A
B
0
F
protein
null
e-antigen
IMMUNE SYSTEM
12/20/11
Crystal Structure of Hepatitis B Virus e-antigen
HEPATITIS B VIRUS; MUS MUSCULUS
mus musculus
mus musculus
hepatitis b virus
Dimattia, M.A., Watts, N.R., Stahl, S.J., Grimes, J.M., Steven, A.C., Stuart, D.I., Wingfield, P.T.
3.34
X-RAY DIFFRACTION
0.233
0.234
false
false
IGHV5
IGKV8
Kappa
0
-11.570817
SPR
null
TBD
sabdab_dataset/3v6z/abangle/3v6z.abangle
sabdab_dataset/3v6z/annotation/3v6z_A_VH.ann
sabdab_dataset/3v6z/annotation/3v6z_B_VL.ann
sabdab_dataset/3v6z/imgt/3v6z_A_H.ann
sabdab_dataset/3v6z/imgt/3v6z_B_L.ann
sabdab_dataset/3v6z/sequence/3v6z_raw.pdb
sabdab_dataset/3v6z/sequence/3v6z_A_VH.fa
sabdab_dataset/3v6z/sequence/3v6z_B_VL.fa
sabdab_dataset/3v6z/structure/3v6z.pdb
sabdab_dataset/3v6z/structure/chothia/3v6z.pdb
false
false
train
3v6z
C
D
0
E
protein
null
e-antigen
IMMUNE SYSTEM
12/20/11
Crystal Structure of Hepatitis B Virus e-antigen
HEPATITIS B VIRUS; MUS MUSCULUS
mus musculus
mus musculus
hepatitis b virus
Dimattia, M.A., Watts, N.R., Stahl, S.J., Grimes, J.M., Steven, A.C., Stuart, D.I., Wingfield, P.T.
3.34
X-RAY DIFFRACTION
0.233
0.234
false
false
IGHV5
IGKV8
Kappa
0
-11.570817
SPR
null
TBD
sabdab_dataset/3v6z/abangle/3v6z.abangle
sabdab_dataset/3v6z/annotation/3v6z_C_VH.ann
sabdab_dataset/3v6z/annotation/3v6z_D_VL.ann
sabdab_dataset/3v6z/imgt/3v6z_C_H.ann
sabdab_dataset/3v6z/imgt/3v6z_D_L.ann
sabdab_dataset/3v6z/sequence/3v6z_raw.pdb
sabdab_dataset/3v6z/sequence/3v6z_C_VH.fa
sabdab_dataset/3v6z/sequence/3v6z_D_VL.fa
sabdab_dataset/3v6z/structure/3v6z.pdb
sabdab_dataset/3v6z/structure/chothia/3v6z.pdb
false
false
train
3v7a
E
H
0
A
protein
null
capsid
IMMUNE SYSTEM
12/20/11
Structural basis for broad detection of genogroup II noroviruses by a monoclonal antibody that binds to a site occluded in the viral particle
HUMAN CALICIVIRUS; MUS MUSCULUS
mus musculus
mus musculus
human calicivirus
Hansman, G.S., Mclellan, J.S., Kwong, P.D.
3.297
X-RAY DIFFRACTION
0.283
0.227
false
false
IGHV1
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/3v7a/abangle/3v7a.abangle
sabdab_dataset/3v7a/annotation/3v7a_E_VH.ann
sabdab_dataset/3v7a/annotation/3v7a_H_VL.ann
sabdab_dataset/3v7a/imgt/3v7a_E_H.ann
sabdab_dataset/3v7a/imgt/3v7a_H_L.ann
sabdab_dataset/3v7a/sequence/3v7a_raw.pdb
sabdab_dataset/3v7a/sequence/3v7a_E_VH.fa
sabdab_dataset/3v7a/sequence/3v7a_H_VL.fa
sabdab_dataset/3v7a/structure/3v7a.pdb
sabdab_dataset/3v7a/structure/chothia/3v7a.pdb
true
false
train
3v7a
F
G
0
B
protein
null
capsid
IMMUNE SYSTEM
12/20/11
Structural basis for broad detection of genogroup II noroviruses by a monoclonal antibody that binds to a site occluded in the viral particle
HUMAN CALICIVIRUS; MUS MUSCULUS
mus musculus
mus musculus
human calicivirus
Hansman, G.S., Mclellan, J.S., Kwong, P.D.
3.297
X-RAY DIFFRACTION
0.283
0.227
false
false
IGHV1
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/3v7a/abangle/3v7a.abangle
sabdab_dataset/3v7a/annotation/3v7a_F_VH.ann
sabdab_dataset/3v7a/annotation/3v7a_G_VL.ann
sabdab_dataset/3v7a/imgt/3v7a_F_H.ann
sabdab_dataset/3v7a/imgt/3v7a_G_L.ann
sabdab_dataset/3v7a/sequence/3v7a_raw.pdb
sabdab_dataset/3v7a/sequence/3v7a_F_VH.fa
sabdab_dataset/3v7a/sequence/3v7a_G_VL.fa
sabdab_dataset/3v7a/structure/3v7a.pdb
sabdab_dataset/3v7a/structure/chothia/3v7a.pdb
true
false
train
3ve0
A
B
0
J | J | I
carbohydrate | protein | protein
NAG | NA | NA
N-ACETYL-D-GLUCOSAMINE | envelope glycoprotein | envelope glycoprotein
Immune system/viral protein
01/06/12
Crystal structure of Sudan Ebolavirus Glycoprotein (strain Boniface) bound to 16F6
SUDAN EBOLAVIRUS; MUS MUSCULUS
mus musculus
mus musculus
sudan ebolavirus | sudan ebolavirus | sudan ebolavirus
Saphire, E.O., Bale, S., Dias, J.M.
3.353
X-RAY DIFFRACTION
0.289
0.222
false
false
IGHV5
IGKV6
Kappa
0.000002
-7.792833
SPR
null
TBD
sabdab_dataset/3ve0/abangle/3ve0.abangle
sabdab_dataset/3ve0/annotation/3ve0_A_VH.ann
sabdab_dataset/3ve0/annotation/3ve0_B_VL.ann
sabdab_dataset/3ve0/imgt/3ve0_A_H.ann
sabdab_dataset/3ve0/imgt/3ve0_B_L.ann
sabdab_dataset/3ve0/sequence/3ve0_raw.pdb
sabdab_dataset/3ve0/sequence/3ve0_A_VH.fa
sabdab_dataset/3ve0/sequence/3ve0_B_VL.fa
sabdab_dataset/3ve0/structure/3ve0.pdb
sabdab_dataset/3ve0/structure/chothia/3ve0.pdb
true
false
validation
3vfg
H
L
0
null
null
null
null
IMMUNE SYSTEM
01/09/12
Crystal structure of monoclonal anitbody 3F8 Fab fragment that binds to GD2 ganglioside
MUS MUSCULUS
mus musculus
mus musculus
null
Ahmed, M., Goldgur, Y., Cheung, N.-K.
1.65
X-RAY DIFFRACTION
0.225
0.176
false
true
IGHV2
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/3vfg/abangle/3vfg.abangle
sabdab_dataset/3vfg/annotation/3vfg_H_VH.ann
sabdab_dataset/3vfg/annotation/3vfg_L_VL.ann
sabdab_dataset/3vfg/imgt/3vfg_H_H.ann
sabdab_dataset/3vfg/imgt/3vfg_L_L.ann
sabdab_dataset/3vfg/sequence/3vfg_raw.pdb
sabdab_dataset/3vfg/sequence/3vfg_H_VH.fa
sabdab_dataset/3vfg/sequence/3vfg_L_VL.fa
sabdab_dataset/3vfg/structure/3vfg.pdb
sabdab_dataset/3vfg/structure/chothia/3vfg.pdb
true
false
train
3vg0
H
L
0
null
null
null
null
IMMUNE SYSTEM
01/10/12
Antibody Fab fragment
MUS MUSCULUS
mus musculus
mus musculus
null
Carpenter, B., Hemsworth, G.R., Ross, R.J., Artymiuk, P.J.
2.27
X-RAY DIFFRACTION
0.260
0.190
false
false
IGHV2
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/3vg0/abangle/3vg0.abangle
sabdab_dataset/3vg0/annotation/3vg0_H_VH.ann
sabdab_dataset/3vg0/annotation/3vg0_L_VL.ann
sabdab_dataset/3vg0/imgt/3vg0_H_H.ann
sabdab_dataset/3vg0/imgt/3vg0_L_L.ann
sabdab_dataset/3vg0/sequence/3vg0_raw.pdb
sabdab_dataset/3vg0/sequence/3vg0_H_VH.fa
sabdab_dataset/3vg0/sequence/3vg0_L_VL.fa
sabdab_dataset/3vg0/structure/3vg0.pdb
sabdab_dataset/3vg0/structure/chothia/3vg0.pdb
false
false
train
3vg9
C
B
0
A
protein
null
adenosine receptor a2a
SIGNALING PROTEIN
08/04/11
Crystal structure of human adenosine A2A receptor with an allosteric inverse-agonist antibody at 2.7 A resolution
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Hino, T., Arakawa, T., Iwanari, H., Yurugi-Kobayashi, T., Ikeda-Suno, C., Nakada-Nakura, Y., Kusano-Arai, O., Weyand, S., Shimamura, T., Nomura, N., Cameron, A.D., Kobayashi, T., Hamakubo, T., Iwata, S., Murata, T.
2.7
X-RAY DIFFRACTION
0.246
0.206
false
false
IGHV1
IGKV12
Kappa
0
-11.40037
SPR
null
TBD
sabdab_dataset/3vg9/abangle/3vg9.abangle
sabdab_dataset/3vg9/annotation/3vg9_C_VH.ann
sabdab_dataset/3vg9/annotation/3vg9_B_VL.ann
sabdab_dataset/3vg9/imgt/3vg9_C_H.ann
sabdab_dataset/3vg9/imgt/3vg9_B_L.ann
sabdab_dataset/3vg9/sequence/3vg9_raw.pdb
sabdab_dataset/3vg9/sequence/3vg9_C_VH.fa
sabdab_dataset/3vg9/sequence/3vg9_B_VL.fa
sabdab_dataset/3vg9/structure/3vg9.pdb
sabdab_dataset/3vg9/structure/chothia/3vg9.pdb
false
false
train
3vga
C
B
0
A
protein
null
adenosine receptor a2a
SIGNALING PROTEIN
08/04/11
Crystal structure of human adenosine A2A receptor with an allosteric inverse-agonist antibody at 3.1 A resolution
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Hino, T., Arakawa, T., Iwanari, H., Yurugi-Kobayashi, T., Ikeda-Suno, C., Nakada-Nakura, Y., Kusano-Arai, O., Weyand, S., Shimamura, T., Nomura, N., Cameron, A.D., Kobayashi, T., Hamakubo, T., Iwata, S., Murata, T.
3.1
X-RAY DIFFRACTION
0.263
0.196
false
false
IGHV1
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/3vga/abangle/3vga.abangle
sabdab_dataset/3vga/annotation/3vga_C_VH.ann
sabdab_dataset/3vga/annotation/3vga_B_VL.ann
sabdab_dataset/3vga/imgt/3vga_C_H.ann
sabdab_dataset/3vga/imgt/3vga_B_L.ann
sabdab_dataset/3vga/sequence/3vga_raw.pdb
sabdab_dataset/3vga/sequence/3vga_C_VH.fa
sabdab_dataset/3vga/sequence/3vga_B_VL.fa
sabdab_dataset/3vga/structure/3vga.pdb
sabdab_dataset/3vga/structure/chothia/3vga.pdb
false
false
train
3vi3
F
E
0
B
protein
null
integrin beta-1
CELL ADHESION/IMMUNE SYSTEM
09/21/11
Crystal structure of alpha5beta1 integrin headpiece (ligand-free form)
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Nagae, M., Nogi, T., Takagi, J.
2.9
X-RAY DIFFRACTION
0.267
0.207
false
true
IGHV1
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/3vi3/abangle/3vi3.abangle
sabdab_dataset/3vi3/annotation/3vi3_F_VH.ann
sabdab_dataset/3vi3/annotation/3vi3_E_VL.ann
sabdab_dataset/3vi3/imgt/3vi3_F_H.ann
sabdab_dataset/3vi3/imgt/3vi3_E_L.ann
sabdab_dataset/3vi3/sequence/3vi3_raw.pdb
sabdab_dataset/3vi3/sequence/3vi3_F_VH.fa
sabdab_dataset/3vi3/sequence/3vi3_E_VL.fa
sabdab_dataset/3vi3/structure/3vi3.pdb
sabdab_dataset/3vi3/structure/chothia/3vi3.pdb
true
false
validation
3vi3
H
L
0
D
protein
null
integrin beta-1
CELL ADHESION/IMMUNE SYSTEM
09/21/11
Crystal structure of alpha5beta1 integrin headpiece (ligand-free form)
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Nagae, M., Nogi, T., Takagi, J.
2.9
X-RAY DIFFRACTION
0.267
0.207
false
true
IGHV1
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/3vi3/abangle/3vi3.abangle
sabdab_dataset/3vi3/annotation/3vi3_H_VH.ann
sabdab_dataset/3vi3/annotation/3vi3_L_VL.ann
sabdab_dataset/3vi3/imgt/3vi3_H_H.ann
sabdab_dataset/3vi3/imgt/3vi3_L_L.ann
sabdab_dataset/3vi3/sequence/3vi3_raw.pdb
sabdab_dataset/3vi3/sequence/3vi3_H_VH.fa
sabdab_dataset/3vi3/sequence/3vi3_L_VL.fa
sabdab_dataset/3vi3/structure/3vi3.pdb
sabdab_dataset/3vi3/structure/chothia/3vi3.pdb
true
false
train
3vi4
F
E
0
B
protein
null
integrin beta-1
CELL ADHESION/IMMUNE SYSTEM
09/21/11
Crystal structure of alpha5beta1 integrin headpiece in complex with RGD peptide
HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Nagae, M., Nogi, T., Takagi, J.
2.9
X-RAY DIFFRACTION
0.275
0.215
false
true
IGHV1
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/3vi4/abangle/3vi4.abangle
sabdab_dataset/3vi4/annotation/3vi4_F_VH.ann
sabdab_dataset/3vi4/annotation/3vi4_E_VL.ann
sabdab_dataset/3vi4/imgt/3vi4_F_H.ann
sabdab_dataset/3vi4/imgt/3vi4_E_L.ann
sabdab_dataset/3vi4/sequence/3vi4_raw.pdb
sabdab_dataset/3vi4/sequence/3vi4_F_VH.fa
sabdab_dataset/3vi4/sequence/3vi4_E_VL.fa
sabdab_dataset/3vi4/structure/3vi4.pdb
sabdab_dataset/3vi4/structure/chothia/3vi4.pdb
false
false
test
3vi4
H
L
0
D
protein
null
integrin beta-1
CELL ADHESION/IMMUNE SYSTEM
09/21/11
Crystal structure of alpha5beta1 integrin headpiece in complex with RGD peptide
HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Nagae, M., Nogi, T., Takagi, J.
2.9
X-RAY DIFFRACTION
0.275
0.215
false
true
IGHV1
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/3vi4/abangle/3vi4.abangle
sabdab_dataset/3vi4/annotation/3vi4_H_VH.ann
sabdab_dataset/3vi4/annotation/3vi4_L_VL.ann
sabdab_dataset/3vi4/imgt/3vi4_H_H.ann
sabdab_dataset/3vi4/imgt/3vi4_L_L.ann
sabdab_dataset/3vi4/sequence/3vi4_raw.pdb
sabdab_dataset/3vi4/sequence/3vi4_H_VH.fa
sabdab_dataset/3vi4/sequence/3vi4_L_VL.fa
sabdab_dataset/3vi4/structure/3vi4.pdb
sabdab_dataset/3vi4/structure/chothia/3vi4.pdb
false
false
train
3vrl
E
F
0
D
protein
null
gag protein
IMMUNE SYSTEM/VIRAL PROTEIN
04/12/12
Crystal structure of BMJ4 p24 capsid protein in complex with A10F9 Fab
HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS
mus musculus
mus musculus
human immunodeficiency virus 1
Gu, Y., Cao, F., Li, S., Yuan, Y.A., Xia, N.
3.2
X-RAY DIFFRACTION
0.292
0.211
false
false
IGHV5
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/3vrl/abangle/3vrl.abangle
sabdab_dataset/3vrl/annotation/3vrl_E_VH.ann
sabdab_dataset/3vrl/annotation/3vrl_F_VL.ann
sabdab_dataset/3vrl/imgt/3vrl_E_H.ann
sabdab_dataset/3vrl/imgt/3vrl_F_L.ann
sabdab_dataset/3vrl/sequence/3vrl_raw.pdb
sabdab_dataset/3vrl/sequence/3vrl_E_VH.fa
sabdab_dataset/3vrl/sequence/3vrl_F_VL.fa
sabdab_dataset/3vrl/structure/3vrl.pdb
sabdab_dataset/3vrl/structure/chothia/3vrl.pdb
true
false
train
3vrl
H
L
0
C
protein
null
gag protein
IMMUNE SYSTEM/VIRAL PROTEIN
04/12/12
Crystal structure of BMJ4 p24 capsid protein in complex with A10F9 Fab
HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS
mus musculus
mus musculus
human immunodeficiency virus 1
Gu, Y., Cao, F., Li, S., Yuan, Y.A., Xia, N.
3.2
X-RAY DIFFRACTION
0.292
0.211
false
false
IGHV5
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/3vrl/abangle/3vrl.abangle
sabdab_dataset/3vrl/annotation/3vrl_H_VH.ann
sabdab_dataset/3vrl/annotation/3vrl_L_VL.ann
sabdab_dataset/3vrl/imgt/3vrl_H_H.ann
sabdab_dataset/3vrl/imgt/3vrl_L_L.ann
sabdab_dataset/3vrl/sequence/3vrl_raw.pdb
sabdab_dataset/3vrl/sequence/3vrl_H_VH.fa
sabdab_dataset/3vrl/sequence/3vrl_L_VL.fa
sabdab_dataset/3vrl/structure/3vrl.pdb
sabdab_dataset/3vrl/structure/chothia/3vrl.pdb
true
false
train
3vw3
H
L
0
A | B | A
nucleic-acid | nucleic-acid | nucleic-acid
64T | NA | NA
5-HYDROXY-THYMIDINE-5'-MONOPHOSPHATE | dna (5'-d(*cp*cp*cp*gp*tp*cp*cp*ap*tp*ap*ap*tp*cp*ap*cp*tp*cp*g)-3') | dna (5'-d(*gp*cp*gp*ap*gp*tp*gp*ap*(64t)p*(5py)p*ap*tp*gp*gp*ap*cp*gp*g)-3')
IMMUNE SYSTEM/DNA
07/30/12
Antibody 64M-5 Fab in complex with a double-stranded DNA (6-4) photoproduct
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
| |
Yokoyama, H., Mizutani, R., Satow, Y.
2.5
X-RAY DIFFRACTION
0.290
0.247
false
false
IGHV1
IGKV1
Kappa
0
-9.082561
Unknown
null
TBD
sabdab_dataset/3vw3/abangle/3vw3.abangle
sabdab_dataset/3vw3/annotation/3vw3_H_VH.ann
sabdab_dataset/3vw3/annotation/3vw3_L_VL.ann
sabdab_dataset/3vw3/imgt/3vw3_H_H.ann
sabdab_dataset/3vw3/imgt/3vw3_L_L.ann
sabdab_dataset/3vw3/sequence/3vw3_raw.pdb
sabdab_dataset/3vw3/sequence/3vw3_H_VH.fa
sabdab_dataset/3vw3/sequence/3vw3_L_VL.fa
sabdab_dataset/3vw3/structure/3vw3.pdb
sabdab_dataset/3vw3/structure/chothia/3vw3.pdb
false
false
validation
3w11
C
D
0
E
protein
null
insulin receptor domains l1-cr
HORMONE/HORMONE RECEPTOR/IMMUNE SYSTEM
11/06/12
Insulin receptor ectodomain construct comprising domains L1-CR in complex with human insulin, Alpha-CT peptide(704-719) and FAB 83-7
HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Lawrence, M.C., Smith, B.J.
3.9
X-RAY DIFFRACTION
0.292
0.264
false
true
IGHV2
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3w11/abangle/3w11.abangle
sabdab_dataset/3w11/annotation/3w11_C_VH.ann
sabdab_dataset/3w11/annotation/3w11_D_VL.ann
sabdab_dataset/3w11/imgt/3w11_C_H.ann
sabdab_dataset/3w11/imgt/3w11_D_L.ann
sabdab_dataset/3w11/sequence/3w11_raw.pdb
sabdab_dataset/3w11/sequence/3w11_C_VH.fa
sabdab_dataset/3w11/sequence/3w11_D_VL.fa
sabdab_dataset/3w11/structure/3w11.pdb
sabdab_dataset/3w11/structure/chothia/3w11.pdb
false
false
train
3w12
C
D
0
E
protein
null
insulin receptor domains l1-cr
HORMONE RECEPTOR/HORMONE/IMMUNE SYSTEM
11/06/12
Insulin receptor ectodomain construct comprising domains L1-CR in complex with high-affinity insulin analogue [D-PRO-B26]-DTI-NH2, alpha-CT peptide(704-719) and FAB 83-7
MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Lawrence, M.C., Smith, B.J., Brzozowsk, A.M.
4.301
X-RAY DIFFRACTION
0.349
0.289
false
true
IGHV2
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3w12/abangle/3w12.abangle
sabdab_dataset/3w12/annotation/3w12_C_VH.ann
sabdab_dataset/3w12/annotation/3w12_D_VL.ann
sabdab_dataset/3w12/imgt/3w12_C_H.ann
sabdab_dataset/3w12/imgt/3w12_D_L.ann
sabdab_dataset/3w12/sequence/3w12_raw.pdb
sabdab_dataset/3w12/sequence/3w12_C_VH.fa
sabdab_dataset/3w12/sequence/3w12_D_VL.fa
sabdab_dataset/3w12/structure/3w12.pdb
sabdab_dataset/3w12/structure/chothia/3w12.pdb
false
false
train
3w13
C
D
0
E
protein
null
insulin receptor domains l1-cr
HORMONE RECEPTOR/HORMONE/IMMUNE SYSTEM
11/06/12
Insulin receptor ectodomain construct comprising domains L1-CR in complex with high-affinity insulin analogue [D-PRO-B26]-DTI-NH2, alphact peptide(693-719) and FAB 83-7
MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Lawrence, M.C., Smith, B.J., Brzozowski, A.M.
4.303
X-RAY DIFFRACTION
0.335
0.289
false
true
IGHV2
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3w13/abangle/3w13.abangle
sabdab_dataset/3w13/annotation/3w13_C_VH.ann
sabdab_dataset/3w13/annotation/3w13_D_VL.ann
sabdab_dataset/3w13/imgt/3w13_C_H.ann
sabdab_dataset/3w13/imgt/3w13_D_L.ann
sabdab_dataset/3w13/sequence/3w13_raw.pdb
sabdab_dataset/3w13/sequence/3w13_C_VH.fa
sabdab_dataset/3w13/sequence/3w13_D_VL.fa
sabdab_dataset/3w13/structure/3w13.pdb
sabdab_dataset/3w13/structure/chothia/3w13.pdb
false
false
train