pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
365 values
r_factor
stringclasses
358 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
abangle
stringlengths
40
40
annotation_H
stringlengths
44
44
annotation_L
stringlengths
44
44
imgt_H
stringlengths
37
37
imgt_L
stringlengths
37
37
sequence_raw
stringlengths
41
41
sequence_H
stringlengths
41
41
sequence_L
stringlengths
41
41
structure
stringlengths
38
38
structure_chothia
stringlengths
46
46
in_nr_set
bool
2 classes
curated_quality_dataset
bool
2 classes
split
stringclasses
3 values
5bk3
A
B
0
B
carbohydrate
NAG
polysaccharide
IMMUNE SYSTEM
09/12/17
Crystal structure of the neutralizing anti-circumsporozoite protein 580 antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.
2.8
X-RAY DIFFRACTION
0.231
0.190
false
true
IGHV3
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/5bk3/abangle/5bk3.abangle
sabdab_dataset/5bk3/annotation/5bk3_A_VH.ann
sabdab_dataset/5bk3/annotation/5bk3_B_VL.ann
sabdab_dataset/5bk3/imgt/5bk3_A_H.ann
sabdab_dataset/5bk3/imgt/5bk3_B_L.ann
sabdab_dataset/5bk3/sequence/5bk3_raw.pdb
sabdab_dataset/5bk3/sequence/5bk3_A_VH.fa
sabdab_dataset/5bk3/sequence/5bk3_B_VL.fa
sabdab_dataset/5bk3/structure/5bk3.pdb
sabdab_dataset/5bk3/structure/chothia/5bk3.pdb
true
false
train
5bk3
C
D
0
D
carbohydrate
NAG
polysaccharide
IMMUNE SYSTEM
09/12/17
Crystal structure of the neutralizing anti-circumsporozoite protein 580 antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.
2.8
X-RAY DIFFRACTION
0.231
0.190
false
true
IGHV3
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/5bk3/abangle/5bk3.abangle
sabdab_dataset/5bk3/annotation/5bk3_C_VH.ann
sabdab_dataset/5bk3/annotation/5bk3_D_VL.ann
sabdab_dataset/5bk3/imgt/5bk3_C_H.ann
sabdab_dataset/5bk3/imgt/5bk3_D_L.ann
sabdab_dataset/5bk3/sequence/5bk3_raw.pdb
sabdab_dataset/5bk3/sequence/5bk3_C_VH.fa
sabdab_dataset/5bk3/sequence/5bk3_D_VL.fa
sabdab_dataset/5bk3/structure/5bk3.pdb
sabdab_dataset/5bk3/structure/chothia/5bk3.pdb
true
false
test
5bk3
E
F
0
F
carbohydrate
NAG
polysaccharide
IMMUNE SYSTEM
09/12/17
Crystal structure of the neutralizing anti-circumsporozoite protein 580 antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.
2.8
X-RAY DIFFRACTION
0.231
0.190
false
true
IGHV3
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/5bk3/abangle/5bk3.abangle
sabdab_dataset/5bk3/annotation/5bk3_E_VH.ann
sabdab_dataset/5bk3/annotation/5bk3_F_VL.ann
sabdab_dataset/5bk3/imgt/5bk3_E_H.ann
sabdab_dataset/5bk3/imgt/5bk3_F_L.ann
sabdab_dataset/5bk3/sequence/5bk3_raw.pdb
sabdab_dataset/5bk3/sequence/5bk3_E_VH.fa
sabdab_dataset/5bk3/sequence/5bk3_F_VL.fa
sabdab_dataset/5bk3/structure/5bk3.pdb
sabdab_dataset/5bk3/structure/chothia/5bk3.pdb
true
false
train
5bk3
H
L
0
L
carbohydrate
NAG
polysaccharide
IMMUNE SYSTEM
09/12/17
Crystal structure of the neutralizing anti-circumsporozoite protein 580 antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.
2.8
X-RAY DIFFRACTION
0.231
0.190
false
true
IGHV3
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/5bk3/abangle/5bk3.abangle
sabdab_dataset/5bk3/annotation/5bk3_H_VH.ann
sabdab_dataset/5bk3/annotation/5bk3_L_VL.ann
sabdab_dataset/5bk3/imgt/5bk3_H_H.ann
sabdab_dataset/5bk3/imgt/5bk3_L_L.ann
sabdab_dataset/5bk3/sequence/5bk3_raw.pdb
sabdab_dataset/5bk3/sequence/5bk3_H_VH.fa
sabdab_dataset/5bk3/sequence/5bk3_L_VL.fa
sabdab_dataset/5bk3/structure/5bk3.pdb
sabdab_dataset/5bk3/structure/chothia/5bk3.pdb
true
false
train
5bk5
B
A
0
null
null
null
null
IMMUNE SYSTEM
09/12/17
Crystal structure of the anti-circumsporozoite protein 663 germline antibody
HOMO SAPIENS
homo sapiens
homo sapiens
null
Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.
3.0
X-RAY DIFFRACTION
0.314
0.257
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/5bk5/abangle/5bk5.abangle
sabdab_dataset/5bk5/annotation/5bk5_B_VH.ann
sabdab_dataset/5bk5/annotation/5bk5_A_VL.ann
sabdab_dataset/5bk5/imgt/5bk5_B_H.ann
sabdab_dataset/5bk5/imgt/5bk5_A_L.ann
sabdab_dataset/5bk5/sequence/5bk5_raw.pdb
sabdab_dataset/5bk5/sequence/5bk5_B_VH.fa
sabdab_dataset/5bk5/sequence/5bk5_A_VL.fa
sabdab_dataset/5bk5/structure/5bk5.pdb
sabdab_dataset/5bk5/structure/chothia/5bk5.pdb
false
false
validation
5bk5
D
C
0
null
null
null
null
IMMUNE SYSTEM
09/12/17
Crystal structure of the anti-circumsporozoite protein 663 germline antibody
HOMO SAPIENS
homo sapiens
homo sapiens
null
Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.
3.0
X-RAY DIFFRACTION
0.314
0.257
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/5bk5/abangle/5bk5.abangle
sabdab_dataset/5bk5/annotation/5bk5_D_VH.ann
sabdab_dataset/5bk5/annotation/5bk5_C_VL.ann
sabdab_dataset/5bk5/imgt/5bk5_D_H.ann
sabdab_dataset/5bk5/imgt/5bk5_C_L.ann
sabdab_dataset/5bk5/sequence/5bk5_raw.pdb
sabdab_dataset/5bk5/sequence/5bk5_D_VH.fa
sabdab_dataset/5bk5/sequence/5bk5_C_VL.fa
sabdab_dataset/5bk5/structure/5bk5.pdb
sabdab_dataset/5bk5/structure/chothia/5bk5.pdb
false
false
test
5bk5
F
E
0
null
null
null
null
IMMUNE SYSTEM
09/12/17
Crystal structure of the anti-circumsporozoite protein 663 germline antibody
HOMO SAPIENS
homo sapiens
homo sapiens
null
Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.
3.0
X-RAY DIFFRACTION
0.314
0.257
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/5bk5/abangle/5bk5.abangle
sabdab_dataset/5bk5/annotation/5bk5_F_VH.ann
sabdab_dataset/5bk5/annotation/5bk5_E_VL.ann
sabdab_dataset/5bk5/imgt/5bk5_F_H.ann
sabdab_dataset/5bk5/imgt/5bk5_E_L.ann
sabdab_dataset/5bk5/sequence/5bk5_raw.pdb
sabdab_dataset/5bk5/sequence/5bk5_F_VH.fa
sabdab_dataset/5bk5/sequence/5bk5_E_VL.fa
sabdab_dataset/5bk5/structure/5bk5.pdb
sabdab_dataset/5bk5/structure/chothia/5bk5.pdb
false
false
train
5bk5
H
G
0
null
null
null
null
IMMUNE SYSTEM
09/12/17
Crystal structure of the anti-circumsporozoite protein 663 germline antibody
HOMO SAPIENS
homo sapiens
homo sapiens
null
Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.
3.0
X-RAY DIFFRACTION
0.314
0.257
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/5bk5/abangle/5bk5.abangle
sabdab_dataset/5bk5/annotation/5bk5_H_VH.ann
sabdab_dataset/5bk5/annotation/5bk5_G_VL.ann
sabdab_dataset/5bk5/imgt/5bk5_H_H.ann
sabdab_dataset/5bk5/imgt/5bk5_G_L.ann
sabdab_dataset/5bk5/sequence/5bk5_raw.pdb
sabdab_dataset/5bk5/sequence/5bk5_H_VH.fa
sabdab_dataset/5bk5/sequence/5bk5_G_VL.fa
sabdab_dataset/5bk5/structure/5bk5.pdb
sabdab_dataset/5bk5/structure/chothia/5bk5.pdb
false
false
train
5bo1
H
L
0
B
protein
null
protein jagged-1
Signaling protein/Immune system
05/26/15
Crystal structure of a human Jag1 fragment in complex with an anti-Jag1 Fab
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Payandeh, J., de Leon-Boenig, G.
2.56
X-RAY DIFFRACTION
0.259
0.220
false
true
IGHV3
IGKV1
Kappa
0
-12.417858
SPR
null
TBD
sabdab_dataset/5bo1/abangle/5bo1.abangle
sabdab_dataset/5bo1/annotation/5bo1_H_VH.ann
sabdab_dataset/5bo1/annotation/5bo1_L_VL.ann
sabdab_dataset/5bo1/imgt/5bo1_H_H.ann
sabdab_dataset/5bo1/imgt/5bo1_L_L.ann
sabdab_dataset/5bo1/sequence/5bo1_raw.pdb
sabdab_dataset/5bo1/sequence/5bo1_H_VH.fa
sabdab_dataset/5bo1/sequence/5bo1_L_VL.fa
sabdab_dataset/5bo1/structure/5bo1.pdb
sabdab_dataset/5bo1/structure/chothia/5bo1.pdb
false
false
train
5bo1
I
M
0
A
protein
null
protein jagged-1
Signaling protein/Immune system
05/26/15
Crystal structure of a human Jag1 fragment in complex with an anti-Jag1 Fab
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Payandeh, J., de Leon-Boenig, G.
2.56
X-RAY DIFFRACTION
0.259
0.220
false
true
IGHV3
IGKV1
Kappa
0
-12.417858
SPR
null
TBD
sabdab_dataset/5bo1/abangle/5bo1.abangle
sabdab_dataset/5bo1/annotation/5bo1_I_VH.ann
sabdab_dataset/5bo1/annotation/5bo1_M_VL.ann
sabdab_dataset/5bo1/imgt/5bo1_I_H.ann
sabdab_dataset/5bo1/imgt/5bo1_M_L.ann
sabdab_dataset/5bo1/sequence/5bo1_raw.pdb
sabdab_dataset/5bo1/sequence/5bo1_I_VH.fa
sabdab_dataset/5bo1/sequence/5bo1_M_VL.fa
sabdab_dataset/5bo1/structure/5bo1.pdb
sabdab_dataset/5bo1/structure/chothia/5bo1.pdb
false
false
train
5bop
A
null
0
B
protein
null
octarellin v.1
DE NOVO PROTEIN
05/27/15
Crystal structure of the artificial nanobody octarellinV.1 complex
SYNTHETIC CONSTRUCT; LAMA GLAMA
lama glama
null
synthetic construct
Figueroa, M., Sleutel, M., Pardon, E., Steyaert, J., Martial, J.A., van de Weerdt, C.
1.95
X-RAY DIFFRACTION
0.229
0.192
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/5bop/annotation/5bop_A_VH.ann
null
sabdab_dataset/5bop/imgt/5bop_A_H.ann
null
sabdab_dataset/5bop/sequence/5bop_raw.pdb
sabdab_dataset/5bop/sequence/5bop_A_VH.fa
null
sabdab_dataset/5bop/structure/5bop.pdb
sabdab_dataset/5bop/structure/chothia/5bop.pdb
true
true
train
5bop
C
null
0
D
protein
null
octarellin v.1
DE NOVO PROTEIN
05/27/15
Crystal structure of the artificial nanobody octarellinV.1 complex
SYNTHETIC CONSTRUCT; LAMA GLAMA
lama glama
null
synthetic construct
Figueroa, M., Sleutel, M., Pardon, E., Steyaert, J., Martial, J.A., van de Weerdt, C.
1.95
X-RAY DIFFRACTION
0.229
0.192
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/5bop/annotation/5bop_C_VH.ann
null
sabdab_dataset/5bop/imgt/5bop_C_H.ann
null
sabdab_dataset/5bop/sequence/5bop_raw.pdb
sabdab_dataset/5bop/sequence/5bop_C_VH.fa
null
sabdab_dataset/5bop/structure/5bop.pdb
sabdab_dataset/5bop/structure/chothia/5bop.pdb
true
false
train
5boz
G
null
0
A
protein
null
ricin
Hydrolase/Immune system
05/27/15
Ricin A chain bound to camelid nanobody (VHH9)(E1)
RICINUS COMMUNIS; LAMA GLAMA
lama glama
null
ricinus communis
Rudolph, M.J., Mantis, N.
3.1
X-RAY DIFFRACTION
0.277
0.215
false
true
IGHV1
null
null
0
-12.489521
SPR
null
TBD
null
sabdab_dataset/5boz/annotation/5boz_G_VH.ann
null
sabdab_dataset/5boz/imgt/5boz_G_H.ann
null
sabdab_dataset/5boz/sequence/5boz_raw.pdb
sabdab_dataset/5boz/sequence/5boz_G_VH.fa
null
sabdab_dataset/5boz/structure/5boz.pdb
sabdab_dataset/5boz/structure/chothia/5boz.pdb
true
true
train
5boz
H
null
0
B
protein
null
ricin
Hydrolase/Immune system
05/27/15
Ricin A chain bound to camelid nanobody (VHH9)(E1)
RICINUS COMMUNIS; LAMA GLAMA
lama glama
null
ricinus communis
Rudolph, M.J., Mantis, N.
3.1
X-RAY DIFFRACTION
0.277
0.215
false
true
IGHV1
null
null
0
-12.489521
SPR
null
TBD
null
sabdab_dataset/5boz/annotation/5boz_H_VH.ann
null
sabdab_dataset/5boz/imgt/5boz_H_H.ann
null
sabdab_dataset/5boz/sequence/5boz_raw.pdb
sabdab_dataset/5boz/sequence/5boz_H_VH.fa
null
sabdab_dataset/5boz/structure/5boz.pdb
sabdab_dataset/5boz/structure/chothia/5boz.pdb
true
false
train
5boz
I
null
0
C
protein
null
ricin
Hydrolase/Immune system
05/27/15
Ricin A chain bound to camelid nanobody (VHH9)(E1)
RICINUS COMMUNIS; LAMA GLAMA
lama glama
null
ricinus communis
Rudolph, M.J., Mantis, N.
3.1
X-RAY DIFFRACTION
0.277
0.215
false
true
IGHV1
null
null
0
-12.489521
SPR
null
TBD
null
sabdab_dataset/5boz/annotation/5boz_I_VH.ann
null
sabdab_dataset/5boz/imgt/5boz_I_H.ann
null
sabdab_dataset/5boz/sequence/5boz_raw.pdb
sabdab_dataset/5boz/sequence/5boz_I_VH.fa
null
sabdab_dataset/5boz/structure/5boz.pdb
sabdab_dataset/5boz/structure/chothia/5boz.pdb
true
false
train
5boz
J
null
0
D
protein
null
ricin
Hydrolase/Immune system
05/27/15
Ricin A chain bound to camelid nanobody (VHH9)(E1)
RICINUS COMMUNIS; LAMA GLAMA
lama glama
null
ricinus communis
Rudolph, M.J., Mantis, N.
3.1
X-RAY DIFFRACTION
0.277
0.215
false
true
IGHV1
null
null
0
-12.489521
SPR
null
TBD
null
sabdab_dataset/5boz/annotation/5boz_J_VH.ann
null
sabdab_dataset/5boz/imgt/5boz_J_H.ann
null
sabdab_dataset/5boz/sequence/5boz_raw.pdb
sabdab_dataset/5boz/sequence/5boz_J_VH.fa
null
sabdab_dataset/5boz/structure/5boz.pdb
sabdab_dataset/5boz/structure/chothia/5boz.pdb
true
false
test
5boz
K
null
0
E
protein
null
ricin
Hydrolase/Immune system
05/27/15
Ricin A chain bound to camelid nanobody (VHH9)(E1)
RICINUS COMMUNIS; LAMA GLAMA
lama glama
null
ricinus communis
Rudolph, M.J., Mantis, N.
3.1
X-RAY DIFFRACTION
0.277
0.215
false
true
IGHV1
null
null
0
-12.489521
SPR
null
TBD
null
sabdab_dataset/5boz/annotation/5boz_K_VH.ann
null
sabdab_dataset/5boz/imgt/5boz_K_H.ann
null
sabdab_dataset/5boz/sequence/5boz_raw.pdb
sabdab_dataset/5boz/sequence/5boz_K_VH.fa
null
sabdab_dataset/5boz/structure/5boz.pdb
sabdab_dataset/5boz/structure/chothia/5boz.pdb
true
false
train
5boz
L
null
0
F
protein
null
ricin
Hydrolase/Immune system
05/27/15
Ricin A chain bound to camelid nanobody (VHH9)(E1)
RICINUS COMMUNIS; LAMA GLAMA
lama glama
null
ricinus communis
Rudolph, M.J., Mantis, N.
3.1
X-RAY DIFFRACTION
0.277
0.215
false
true
IGHV1
null
null
0
-12.489521
SPR
null
TBD
null
sabdab_dataset/5boz/annotation/5boz_L_VH.ann
null
sabdab_dataset/5boz/imgt/5boz_L_H.ann
null
sabdab_dataset/5boz/sequence/5boz_raw.pdb
sabdab_dataset/5boz/sequence/5boz_L_VH.fa
null
sabdab_dataset/5boz/structure/5boz.pdb
sabdab_dataset/5boz/structure/chothia/5boz.pdb
true
false
train
5bq7
A
B
0
null
null
null
null
IMMUNE SYSTEM
05/28/15
Crystal structure of chikungunya virus-human Fab 5F-10 fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Mangala Prasad, V., Rossmann, M.G.
2.738
X-RAY DIFFRACTION
0.288
0.232
false
true
IGHV7
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5bq7/abangle/5bq7.abangle
sabdab_dataset/5bq7/annotation/5bq7_A_VH.ann
sabdab_dataset/5bq7/annotation/5bq7_B_VL.ann
sabdab_dataset/5bq7/imgt/5bq7_A_H.ann
sabdab_dataset/5bq7/imgt/5bq7_B_L.ann
sabdab_dataset/5bq7/sequence/5bq7_raw.pdb
sabdab_dataset/5bq7/sequence/5bq7_A_VH.fa
sabdab_dataset/5bq7/sequence/5bq7_B_VL.fa
sabdab_dataset/5bq7/structure/5bq7.pdb
sabdab_dataset/5bq7/structure/chothia/5bq7.pdb
true
false
train
5bv7
C
B
0
A
protein
null
phosphatidylcholine-sterol acyltransferase
HYDROLASE/IMMUNE SYSTEM
06/04/15
Crystal structure of human LCAT (L4F, N5D) in complex with Fab of an agonistic antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Piper, D.E., Romanow, W.G., Thibault, S.T., Walker, N.P.C.
2.45
X-RAY DIFFRACTION
0.242
0.189
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/5bv7/abangle/5bv7.abangle
sabdab_dataset/5bv7/annotation/5bv7_C_VH.ann
sabdab_dataset/5bv7/annotation/5bv7_B_VL.ann
sabdab_dataset/5bv7/imgt/5bv7_C_H.ann
sabdab_dataset/5bv7/imgt/5bv7_B_L.ann
sabdab_dataset/5bv7/sequence/5bv7_raw.pdb
sabdab_dataset/5bv7/sequence/5bv7_C_VH.fa
sabdab_dataset/5bv7/sequence/5bv7_B_VL.fa
sabdab_dataset/5bv7/structure/5bv7.pdb
sabdab_dataset/5bv7/structure/chothia/5bv7.pdb
true
false
train
5bv7
H
L
0
A
protein
null
phosphatidylcholine-sterol acyltransferase
HYDROLASE/IMMUNE SYSTEM
06/04/15
Crystal structure of human LCAT (L4F, N5D) in complex with Fab of an agonistic antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Piper, D.E., Romanow, W.G., Thibault, S.T., Walker, N.P.C.
2.45
X-RAY DIFFRACTION
0.242
0.189
false
false
IGHV4
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/5bv7/abangle/5bv7.abangle
sabdab_dataset/5bv7/annotation/5bv7_H_VH.ann
sabdab_dataset/5bv7/annotation/5bv7_L_VL.ann
sabdab_dataset/5bv7/imgt/5bv7_H_H.ann
sabdab_dataset/5bv7/imgt/5bv7_L_L.ann
sabdab_dataset/5bv7/sequence/5bv7_raw.pdb
sabdab_dataset/5bv7/sequence/5bv7_H_VH.fa
sabdab_dataset/5bv7/sequence/5bv7_L_VL.fa
sabdab_dataset/5bv7/structure/5bv7.pdb
sabdab_dataset/5bv7/structure/chothia/5bv7.pdb
true
false
test
5bvj
B
A
0
null
null
null
null
IMMUNE SYSTEM
06/05/15
The molecular mode of action and species specificity of canakinumab, a human monoclonal antibody neutralizing IL-1beta
HOMO SAPIENS
homo sapiens
homo sapiens
null
Rondeau, J.M.
2.0
X-RAY DIFFRACTION
0.228
0.186
false
true
IGHV3
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/5bvj/abangle/5bvj.abangle
sabdab_dataset/5bvj/annotation/5bvj_B_VH.ann
sabdab_dataset/5bvj/annotation/5bvj_A_VL.ann
sabdab_dataset/5bvj/imgt/5bvj_B_H.ann
sabdab_dataset/5bvj/imgt/5bvj_A_L.ann
sabdab_dataset/5bvj/sequence/5bvj_raw.pdb
sabdab_dataset/5bvj/sequence/5bvj_B_VH.fa
sabdab_dataset/5bvj/sequence/5bvj_A_VL.fa
sabdab_dataset/5bvj/structure/5bvj.pdb
sabdab_dataset/5bvj/structure/chothia/5bvj.pdb
true
false
test
5bvj
D
C
0
null
null
null
null
IMMUNE SYSTEM
06/05/15
The molecular mode of action and species specificity of canakinumab, a human monoclonal antibody neutralizing IL-1beta
HOMO SAPIENS
homo sapiens
homo sapiens
null
Rondeau, J.M.
2.0
X-RAY DIFFRACTION
0.228
0.186
false
true
IGHV3
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/5bvj/abangle/5bvj.abangle
sabdab_dataset/5bvj/annotation/5bvj_D_VH.ann
sabdab_dataset/5bvj/annotation/5bvj_C_VL.ann
sabdab_dataset/5bvj/imgt/5bvj_D_H.ann
sabdab_dataset/5bvj/imgt/5bvj_C_L.ann
sabdab_dataset/5bvj/sequence/5bvj_raw.pdb
sabdab_dataset/5bvj/sequence/5bvj_D_VH.fa
sabdab_dataset/5bvj/sequence/5bvj_C_VL.fa
sabdab_dataset/5bvj/structure/5bvj.pdb
sabdab_dataset/5bvj/structure/chothia/5bvj.pdb
true
false
train
5bvj
F
E
0
null
null
null
null
IMMUNE SYSTEM
06/05/15
The molecular mode of action and species specificity of canakinumab, a human monoclonal antibody neutralizing IL-1beta
HOMO SAPIENS
homo sapiens
homo sapiens
null
Rondeau, J.M.
2.0
X-RAY DIFFRACTION
0.228
0.186
false
true
IGHV3
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/5bvj/abangle/5bvj.abangle
sabdab_dataset/5bvj/annotation/5bvj_F_VH.ann
sabdab_dataset/5bvj/annotation/5bvj_E_VL.ann
sabdab_dataset/5bvj/imgt/5bvj_F_H.ann
sabdab_dataset/5bvj/imgt/5bvj_E_L.ann
sabdab_dataset/5bvj/sequence/5bvj_raw.pdb
sabdab_dataset/5bvj/sequence/5bvj_F_VH.fa
sabdab_dataset/5bvj/sequence/5bvj_E_VL.fa
sabdab_dataset/5bvj/structure/5bvj.pdb
sabdab_dataset/5bvj/structure/chothia/5bvj.pdb
true
false
train
5bvj
H
G
0
null
null
null
null
IMMUNE SYSTEM
06/05/15
The molecular mode of action and species specificity of canakinumab, a human monoclonal antibody neutralizing IL-1beta
HOMO SAPIENS
homo sapiens
homo sapiens
null
Rondeau, J.M.
2.0
X-RAY DIFFRACTION
0.228
0.186
false
true
IGHV3
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/5bvj/abangle/5bvj.abangle
sabdab_dataset/5bvj/annotation/5bvj_H_VH.ann
sabdab_dataset/5bvj/annotation/5bvj_G_VL.ann
sabdab_dataset/5bvj/imgt/5bvj_H_H.ann
sabdab_dataset/5bvj/imgt/5bvj_G_L.ann
sabdab_dataset/5bvj/sequence/5bvj_raw.pdb
sabdab_dataset/5bvj/sequence/5bvj_H_VH.fa
sabdab_dataset/5bvj/sequence/5bvj_G_VL.fa
sabdab_dataset/5bvj/structure/5bvj.pdb
sabdab_dataset/5bvj/structure/chothia/5bvj.pdb
true
false
train
5bvp
H
L
0
I
protein
null
interleukin-1 beta
IMMUNE SYSTEM
06/05/15
The molecular mode of action and species specificity of canakinumab, a human monoclonal antibody neutralizing IL-1beta
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Rondeau, J.M.
2.2
X-RAY DIFFRACTION
0.231
0.188
false
true
IGHV3
IGKV6
Kappa
0
-14.345982
SPR
null
TBD
sabdab_dataset/5bvp/abangle/5bvp.abangle
sabdab_dataset/5bvp/annotation/5bvp_H_VH.ann
sabdab_dataset/5bvp/annotation/5bvp_L_VL.ann
sabdab_dataset/5bvp/imgt/5bvp_H_H.ann
sabdab_dataset/5bvp/imgt/5bvp_L_L.ann
sabdab_dataset/5bvp/sequence/5bvp_raw.pdb
sabdab_dataset/5bvp/sequence/5bvp_H_VH.fa
sabdab_dataset/5bvp/sequence/5bvp_L_VL.fa
sabdab_dataset/5bvp/structure/5bvp.pdb
sabdab_dataset/5bvp/structure/chothia/5bvp.pdb
false
false
train
5bzd
B
A
0
null
null
null
null
IMMUNE SYSTEM
06/11/15
Crystal Structure of PCDN-27A, an antibody from the PCDN family of HIV-1 antibodies
HOMO SAPIENS
homo sapiens
homo sapiens
null
Garces, F., WILSON, I.A.
2.7
X-RAY DIFFRACTION
0.247
0.211
false
true
IGHV4
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/5bzd/abangle/5bzd.abangle
sabdab_dataset/5bzd/annotation/5bzd_B_VH.ann
sabdab_dataset/5bzd/annotation/5bzd_A_VL.ann
sabdab_dataset/5bzd/imgt/5bzd_B_H.ann
sabdab_dataset/5bzd/imgt/5bzd_A_L.ann
sabdab_dataset/5bzd/sequence/5bzd_raw.pdb
sabdab_dataset/5bzd/sequence/5bzd_B_VH.fa
sabdab_dataset/5bzd/sequence/5bzd_A_VL.fa
sabdab_dataset/5bzd/structure/5bzd.pdb
sabdab_dataset/5bzd/structure/chothia/5bzd.pdb
true
false
train
5bzd
D
C
0
null
null
null
null
IMMUNE SYSTEM
06/11/15
Crystal Structure of PCDN-27A, an antibody from the PCDN family of HIV-1 antibodies
HOMO SAPIENS
homo sapiens
homo sapiens
null
Garces, F., WILSON, I.A.
2.7
X-RAY DIFFRACTION
0.247
0.211
false
true
IGHV4
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/5bzd/abangle/5bzd.abangle
sabdab_dataset/5bzd/annotation/5bzd_D_VH.ann
sabdab_dataset/5bzd/annotation/5bzd_C_VL.ann
sabdab_dataset/5bzd/imgt/5bzd_D_H.ann
sabdab_dataset/5bzd/imgt/5bzd_C_L.ann
sabdab_dataset/5bzd/sequence/5bzd_raw.pdb
sabdab_dataset/5bzd/sequence/5bzd_D_VH.fa
sabdab_dataset/5bzd/sequence/5bzd_C_VL.fa
sabdab_dataset/5bzd/structure/5bzd.pdb
sabdab_dataset/5bzd/structure/chothia/5bzd.pdb
true
false
train
5bzw
B
A
0
B
carbohydrate
NAG
N-ACETYL-D-GLUCOSAMINE
IMMUNE SYSTEM
06/11/15
Crystal Structure of PCDN-27B, an antibody from the PCDN family of HIV-1 antibodies
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Garces, F., WILSON, I.A.
2.9
X-RAY DIFFRACTION
0.297
0.233
false
true
IGHV4
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/5bzw/abangle/5bzw.abangle
sabdab_dataset/5bzw/annotation/5bzw_B_VH.ann
sabdab_dataset/5bzw/annotation/5bzw_A_VL.ann
sabdab_dataset/5bzw/imgt/5bzw_B_H.ann
sabdab_dataset/5bzw/imgt/5bzw_A_L.ann
sabdab_dataset/5bzw/sequence/5bzw_raw.pdb
sabdab_dataset/5bzw/sequence/5bzw_B_VH.fa
sabdab_dataset/5bzw/sequence/5bzw_A_VL.fa
sabdab_dataset/5bzw/structure/5bzw.pdb
sabdab_dataset/5bzw/structure/chothia/5bzw.pdb
true
false
train
5c0n
C
D
0
B
protein
null
fatty acid-binding protein, adipocyte
LIPID TRANSPORT
06/12/15
Development of a monoclonal antibody targeting secreted aP2 to treat diabetes and fatty liver disease
ORYCTOLAGUS CUNICULUS; MUS MUSCULUS
oryctolagus cuniculus
oryctolagus cuniculus
mus musculus
Doyle, C.
3.0
X-RAY DIFFRACTION
0.265
0.186
false
true
IGHV1
IGKV1
Kappa
0.000004
-7.345158
SPR
null
TBD
sabdab_dataset/5c0n/abangle/5c0n.abangle
sabdab_dataset/5c0n/annotation/5c0n_C_VH.ann
sabdab_dataset/5c0n/annotation/5c0n_D_VL.ann
sabdab_dataset/5c0n/imgt/5c0n_C_H.ann
sabdab_dataset/5c0n/imgt/5c0n_D_L.ann
sabdab_dataset/5c0n/sequence/5c0n_raw.pdb
sabdab_dataset/5c0n/sequence/5c0n_C_VH.fa
sabdab_dataset/5c0n/sequence/5c0n_D_VL.fa
sabdab_dataset/5c0n/structure/5c0n.pdb
sabdab_dataset/5c0n/structure/chothia/5c0n.pdb
true
false
train
5c0n
H
L
0
A
protein
null
fatty acid-binding protein, adipocyte
LIPID TRANSPORT
06/12/15
Development of a monoclonal antibody targeting secreted aP2 to treat diabetes and fatty liver disease
ORYCTOLAGUS CUNICULUS; MUS MUSCULUS
oryctolagus cuniculus
oryctolagus cuniculus
mus musculus
Doyle, C.
3.0
X-RAY DIFFRACTION
0.265
0.186
false
true
IGHV1
IGKV1
Kappa
0.000004
-7.345158
SPR
null
TBD
sabdab_dataset/5c0n/abangle/5c0n.abangle
sabdab_dataset/5c0n/annotation/5c0n_H_VH.ann
sabdab_dataset/5c0n/annotation/5c0n_L_VL.ann
sabdab_dataset/5c0n/imgt/5c0n_H_H.ann
sabdab_dataset/5c0n/imgt/5c0n_L_L.ann
sabdab_dataset/5c0n/sequence/5c0n_raw.pdb
sabdab_dataset/5c0n/sequence/5c0n_H_VH.fa
sabdab_dataset/5c0n/sequence/5c0n_L_VL.fa
sabdab_dataset/5c0n/structure/5c0n.pdb
sabdab_dataset/5c0n/structure/chothia/5c0n.pdb
true
false
train
5c0r
H
L
0
A
protein
null
hemagglutinin, envelope glycoprotein, fibritin fusionprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/12/15
Crystal Structure of a Generation 3 Influenza Hemagglutinin Stabilized Stem Complexed with the Broadly Neutralizing Antibody C179
MUS MUSCULUS; INFLUENZA A VIRUS, HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 GROUP M SUBTYPE B, ENTEROBACTERIA PHAGE T4
mus musculus
mus musculus
influenza a virus, human immunodeficiency virustype 1 group m subtype b, enterobacteria phage t4
Boyington, J.C., kwong, P.D., Nabel, G.J., Mascola, J.R.
3.188
X-RAY DIFFRACTION
0.251
0.199
false
true
IGHV7
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/5c0r/abangle/5c0r.abangle
sabdab_dataset/5c0r/annotation/5c0r_H_VH.ann
sabdab_dataset/5c0r/annotation/5c0r_L_VL.ann
sabdab_dataset/5c0r/imgt/5c0r_H_H.ann
sabdab_dataset/5c0r/imgt/5c0r_L_L.ann
sabdab_dataset/5c0r/sequence/5c0r_raw.pdb
sabdab_dataset/5c0r/sequence/5c0r_H_VH.fa
sabdab_dataset/5c0r/sequence/5c0r_L_VL.fa
sabdab_dataset/5c0r/structure/5c0r.pdb
sabdab_dataset/5c0r/structure/chothia/5c0r.pdb
true
false
train
5c0s
H
L
0
A
protein
null
hemagglutinin, envelope glycoprotein, fibritin fusionprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/12/15
Crystal structure of a generation 4 influenza hemagglutinin stabilized stem in complex with the broadly neutralizing antibody CR6261
HOMO SAPIENS; INFLUENZA A VIRUS, HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 GROUP M SUBTYPE B, ENTEROBACTERIA PHAGE T4
homo sapiens
homo sapiens
influenza a virus, human immunodeficiency virustype 1 group m subtype b, enterobacteria phage t4
Boyington, J.C., Kwong, P.D., Nabel, G.J., Mascola, J.R.
4.3
X-RAY DIFFRACTION
0.310
0.238
false
true
IGHV1
IGLV1
Lambda
0
-11.068807
SPR
null
TBD
sabdab_dataset/5c0s/abangle/5c0s.abangle
sabdab_dataset/5c0s/annotation/5c0s_H_VH.ann
sabdab_dataset/5c0s/annotation/5c0s_L_VL.ann
sabdab_dataset/5c0s/imgt/5c0s_H_H.ann
sabdab_dataset/5c0s/imgt/5c0s_L_L.ann
sabdab_dataset/5c0s/sequence/5c0s_raw.pdb
sabdab_dataset/5c0s/sequence/5c0s_H_VH.fa
sabdab_dataset/5c0s/sequence/5c0s_L_VL.fa
sabdab_dataset/5c0s/structure/5c0s.pdb
sabdab_dataset/5c0s/structure/chothia/5c0s.pdb
true
false
train
5c1m
B
null
0
A
protein
null
mu-type opioid receptor
Signaling Protein/antagonist
06/15/15
Crystal structure of active mu-opioid receptor bound to the agonist BU72
LAMA GLAMA; MUS MUSCULUS
lama glama
null
mus musculus
Huang, W.J., Manglik, A., Venkatakrishnan, A.J., Laeremans, T., Feinberg, E.N., Sanborn, A.L., Kato, H.E., Livingston, K.E., Thorsen, T.S., Kling, R., Granier, S., Gmeiner, P., Husbands, S.M., Traynor, J.R., Weis, W.I., Steyaert, J., Dror, R.O., Kobilka, B.K.
2.1
X-RAY DIFFRACTION
0.222
0.185
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/5c1m/annotation/5c1m_B_VH.ann
null
sabdab_dataset/5c1m/imgt/5c1m_B_H.ann
null
sabdab_dataset/5c1m/sequence/5c1m_raw.pdb
sabdab_dataset/5c1m/sequence/5c1m_B_VH.fa
null
sabdab_dataset/5c1m/structure/5c1m.pdb
sabdab_dataset/5c1m/structure/chothia/5c1m.pdb
false
false
train
5c2b
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/15/15
anti-CXCL13 parental scFv - 3B4
HOMO SAPIENS
homo sapiens
homo sapiens
null
Tu, C., Bard, J., Mosyak, L.
1.4049
X-RAY DIFFRACTION
0.194
0.179
true
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/5c2b/abangle/5c2b.abangle
sabdab_dataset/5c2b/annotation/5c2b_H_VH.ann
sabdab_dataset/5c2b/annotation/5c2b_L_VL.ann
sabdab_dataset/5c2b/imgt/5c2b_H_H.ann
sabdab_dataset/5c2b/imgt/5c2b_L_L.ann
sabdab_dataset/5c2b/sequence/5c2b_raw.pdb
sabdab_dataset/5c2b/sequence/5c2b_H_VH.fa
sabdab_dataset/5c2b/sequence/5c2b_L_VL.fa
sabdab_dataset/5c2b/structure/5c2b.pdb
sabdab_dataset/5c2b/structure/chothia/5c2b.pdb
false
false
validation
5c2u
B
null
0
A
protein
null
nup54
TRANSPORT PROTEIN
06/16/15
Ferredoxin-like domain of nucleoporin Nup54 bound to a nanobody
CAMELUS DROMEDARIUS; XENOPUS LAEVIS
camelus dromedarius
null
xenopus laevis
Chug, H., Trakhanov, S., Hulsmann, B.B., Pleiner, T., Gorlich, D.
1.55
X-RAY DIFFRACTION
0.205
0.176
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/5c2u/annotation/5c2u_B_VH.ann
null
sabdab_dataset/5c2u/imgt/5c2u_B_H.ann
null
sabdab_dataset/5c2u/sequence/5c2u_raw.pdb
sabdab_dataset/5c2u/sequence/5c2u_B_VH.fa
null
sabdab_dataset/5c2u/structure/5c2u.pdb
sabdab_dataset/5c2u/structure/chothia/5c2u.pdb
true
true
train
5c3l
D
null
0
C | A | B
protein | protein | protein
NA | NA | NA
nucleoporin nup62 | nup54 | nucleoporin nup58
TRANSPORT PROTEIN
06/17/15
Structure of the metazoan Nup62.Nup58.Nup54 nucleoporin complex.
XENOPUS LAEVIS; CAMELUS DROMEDARIUS
camelus dromedarius
null
xenopus laevis | xenopus laevis | xenopus laevis
Chug, H., Trakhanov, S., Hulsmann, B.B., Pleiner, T., Gorlich, D.
2.9
X-RAY DIFFRACTION
0.301
0.265
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/5c3l/annotation/5c3l_D_VH.ann
null
sabdab_dataset/5c3l/imgt/5c3l_D_H.ann
null
sabdab_dataset/5c3l/sequence/5c3l_raw.pdb
sabdab_dataset/5c3l/sequence/5c3l_D_VH.fa
null
sabdab_dataset/5c3l/structure/5c3l.pdb
sabdab_dataset/5c3l/structure/chothia/5c3l.pdb
true
true
validation
5c6t
H
L
0
A
protein
null
envelope glycoprotein b
Viral Protein/Immue System
06/23/15
Crystal structure of HCMV glycoprotein B in complex with 1G2 Fab
HOMO SAPIENS; HUMAN CYTOMEGALOVIRUS
homo sapiens
homo sapiens
human cytomegalovirus
Chandramouli, S., Ciferri, C., Settembre, E.C., Carfi, A.
3.6
X-RAY DIFFRACTION
0.260
0.212
false
true
IGHV4
IGLV1
Lambda
0
-13.486994
SPR
null
TBD
sabdab_dataset/5c6t/abangle/5c6t.abangle
sabdab_dataset/5c6t/annotation/5c6t_H_VH.ann
sabdab_dataset/5c6t/annotation/5c6t_L_VL.ann
sabdab_dataset/5c6t/imgt/5c6t_H_H.ann
sabdab_dataset/5c6t/imgt/5c6t_L_L.ann
sabdab_dataset/5c6t/sequence/5c6t_raw.pdb
sabdab_dataset/5c6t/sequence/5c6t_H_VH.fa
sabdab_dataset/5c6t/sequence/5c6t_L_VL.fa
sabdab_dataset/5c6t/structure/5c6t.pdb
sabdab_dataset/5c6t/structure/chothia/5c6t.pdb
true
false
train
5c6w
H
h
0
null
null
null
null
IMMUNE SYSTEM
06/23/15
anti-CXCL13 scFv - E10
HOMO SAPIENS
homo sapiens
null
null
Tu, C., Bard, J., Mosyak, L.
1.54
X-RAY DIFFRACTION
0.164
0.154
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/5c6w/abangle/5c6w.abangle
sabdab_dataset/5c6w/annotation/5c6w_H_VH.ann
sabdab_dataset/5c6w/annotation/5c6w_H_VL.ann
sabdab_dataset/5c6w/imgt/5c6w_H_H.ann
sabdab_dataset/5c6w/imgt/5c6w_H_L.ann
sabdab_dataset/5c6w/sequence/5c6w_raw.pdb
sabdab_dataset/5c6w/sequence/5c6w_H_VH.fa
sabdab_dataset/5c6w/sequence/5c6w_H_VL.fa
sabdab_dataset/5c6w/structure/5c6w.pdb
sabdab_dataset/5c6w/structure/chothia/5c6w.pdb
false
false
train
5c6w
J
j
0
null
null
null
null
IMMUNE SYSTEM
06/23/15
anti-CXCL13 scFv - E10
HOMO SAPIENS
homo sapiens
null
null
Tu, C., Bard, J., Mosyak, L.
1.54
X-RAY DIFFRACTION
0.164
0.154
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/5c6w/abangle/5c6w.abangle
sabdab_dataset/5c6w/annotation/5c6w_J_VH.ann
sabdab_dataset/5c6w/annotation/5c6w_J_VL.ann
sabdab_dataset/5c6w/imgt/5c6w_J_H.ann
sabdab_dataset/5c6w/imgt/5c6w_J_L.ann
sabdab_dataset/5c6w/sequence/5c6w_raw.pdb
sabdab_dataset/5c6w/sequence/5c6w_J_VH.fa
sabdab_dataset/5c6w/sequence/5c6w_J_VL.fa
sabdab_dataset/5c6w/structure/5c6w.pdb
sabdab_dataset/5c6w/structure/chothia/5c6w.pdb
false
false
train
5c7k
A
B
0
C
protein
null
envelope glycoprotein gp120
IMMUNE SYSTEM
06/24/15
Crystal structure BG505 SOSIP gp140 HIV-1 Env trimer bound to broadly neutralizing antibodies PGT128 and 8ANC195
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Kong, L., Stanfield, R.L., Wilson, I.A.
4.6019
X-RAY DIFFRACTION
0.295
0.289
false
true
unknown
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/5c7k/abangle/5c7k.abangle
sabdab_dataset/5c7k/annotation/5c7k_A_VH.ann
sabdab_dataset/5c7k/annotation/5c7k_B_VL.ann
sabdab_dataset/5c7k/imgt/5c7k_A_H.ann
sabdab_dataset/5c7k/imgt/5c7k_B_L.ann
sabdab_dataset/5c7k/sequence/5c7k_raw.pdb
sabdab_dataset/5c7k/sequence/5c7k_A_VH.fa
sabdab_dataset/5c7k/sequence/5c7k_B_VL.fa
sabdab_dataset/5c7k/structure/5c7k.pdb
sabdab_dataset/5c7k/structure/chothia/5c7k.pdb
false
false
train
5c7k
E
F
0
C | D
protein | protein
NA | NA
envelope glycoprotein gp120 | envelope glycoprotein gp41
IMMUNE SYSTEM
06/24/15
Crystal structure BG505 SOSIP gp140 HIV-1 Env trimer bound to broadly neutralizing antibodies PGT128 and 8ANC195
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1 | human immunodeficiency virus 1
Kong, L., Stanfield, R.L., Wilson, I.A.
4.6019
X-RAY DIFFRACTION
0.295
0.289
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5c7k/abangle/5c7k.abangle
sabdab_dataset/5c7k/annotation/5c7k_E_VH.ann
sabdab_dataset/5c7k/annotation/5c7k_F_VL.ann
sabdab_dataset/5c7k/imgt/5c7k_E_H.ann
sabdab_dataset/5c7k/imgt/5c7k_F_L.ann
sabdab_dataset/5c7k/sequence/5c7k_raw.pdb
sabdab_dataset/5c7k/sequence/5c7k_E_VH.fa
sabdab_dataset/5c7k/sequence/5c7k_F_VL.fa
sabdab_dataset/5c7k/structure/5c7k.pdb
sabdab_dataset/5c7k/structure/chothia/5c7k.pdb
false
false
train
5c7x
H
L
0
A
protein
null
granulocyte-macrophage colony-stimulating factor
IMMUNE SYSTEM
06/25/15
Crystal structure of MOR04357, a neutralizing anti-human GM-CSF antibody Fab fragment in complex with human GM-CSF
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Eylenstein, R., Weinfurtner, D., Steidl, S., Boettcher, J., Augustin, M.
2.95
X-RAY DIFFRACTION
0.276
0.234
false
true
IGHV3
IGLV3
Lambda
0
-16.913816
Unknown
null
TBD
sabdab_dataset/5c7x/abangle/5c7x.abangle
sabdab_dataset/5c7x/annotation/5c7x_H_VH.ann
sabdab_dataset/5c7x/annotation/5c7x_L_VL.ann
sabdab_dataset/5c7x/imgt/5c7x_H_H.ann
sabdab_dataset/5c7x/imgt/5c7x_L_L.ann
sabdab_dataset/5c7x/sequence/5c7x_raw.pdb
sabdab_dataset/5c7x/sequence/5c7x_H_VH.fa
sabdab_dataset/5c7x/sequence/5c7x_L_VL.fa
sabdab_dataset/5c7x/structure/5c7x.pdb
sabdab_dataset/5c7x/structure/chothia/5c7x.pdb
false
false
train
5c7x
M
N
0
B
protein
null
granulocyte-macrophage colony-stimulating factor
IMMUNE SYSTEM
06/25/15
Crystal structure of MOR04357, a neutralizing anti-human GM-CSF antibody Fab fragment in complex with human GM-CSF
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Eylenstein, R., Weinfurtner, D., Steidl, S., Boettcher, J., Augustin, M.
2.95
X-RAY DIFFRACTION
0.276
0.234
false
true
IGHV3
IGLV3
Lambda
0
-16.913816
Unknown
null
TBD
sabdab_dataset/5c7x/abangle/5c7x.abangle
sabdab_dataset/5c7x/annotation/5c7x_M_VH.ann
sabdab_dataset/5c7x/annotation/5c7x_N_VL.ann
sabdab_dataset/5c7x/imgt/5c7x_M_H.ann
sabdab_dataset/5c7x/imgt/5c7x_N_L.ann
sabdab_dataset/5c7x/sequence/5c7x_raw.pdb
sabdab_dataset/5c7x/sequence/5c7x_M_VH.fa
sabdab_dataset/5c7x/sequence/5c7x_N_VL.fa
sabdab_dataset/5c7x/structure/5c7x.pdb
sabdab_dataset/5c7x/structure/chothia/5c7x.pdb
false
false
train
5c8j
A
B
0
I
protein
null
protein mj0480
MEMBRANE PROTEIN
06/25/15
A YidC-like protein in the archaeal plasma membrane
HOMO SAPIENS; METHANOCALDOCOCCUS JANNASCHII (STRAIN ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
homo sapiens
homo sapiens
methanocaldococcus jannaschii (strain atcc43067 / dsm 2661 / jal-1 / jcm 10045 / nbrc 100440)
Borowska, M.T., Dominik, P.K., Anghel, S.A., Kossiakoff, A.A., Keenan, R.J.
3.502
X-RAY DIFFRACTION
0.302
0.253
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5c8j/abangle/5c8j.abangle
sabdab_dataset/5c8j/annotation/5c8j_A_VH.ann
sabdab_dataset/5c8j/annotation/5c8j_B_VL.ann
sabdab_dataset/5c8j/imgt/5c8j_A_H.ann
sabdab_dataset/5c8j/imgt/5c8j_B_L.ann
sabdab_dataset/5c8j/sequence/5c8j_raw.pdb
sabdab_dataset/5c8j/sequence/5c8j_A_VH.fa
sabdab_dataset/5c8j/sequence/5c8j_B_VL.fa
sabdab_dataset/5c8j/structure/5c8j.pdb
sabdab_dataset/5c8j/structure/chothia/5c8j.pdb
false
false
train
5c8j
C
D
0
L
protein
null
protein mj0480
MEMBRANE PROTEIN
06/25/15
A YidC-like protein in the archaeal plasma membrane
HOMO SAPIENS; METHANOCALDOCOCCUS JANNASCHII (STRAIN ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
homo sapiens
homo sapiens
methanocaldococcus jannaschii (strain atcc43067 / dsm 2661 / jal-1 / jcm 10045 / nbrc 100440)
Borowska, M.T., Dominik, P.K., Anghel, S.A., Kossiakoff, A.A., Keenan, R.J.
3.502
X-RAY DIFFRACTION
0.302
0.253
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5c8j/abangle/5c8j.abangle
sabdab_dataset/5c8j/annotation/5c8j_C_VH.ann
sabdab_dataset/5c8j/annotation/5c8j_D_VL.ann
sabdab_dataset/5c8j/imgt/5c8j_C_H.ann
sabdab_dataset/5c8j/imgt/5c8j_D_L.ann
sabdab_dataset/5c8j/sequence/5c8j_raw.pdb
sabdab_dataset/5c8j/sequence/5c8j_C_VH.fa
sabdab_dataset/5c8j/sequence/5c8j_D_VL.fa
sabdab_dataset/5c8j/structure/5c8j.pdb
sabdab_dataset/5c8j/structure/chothia/5c8j.pdb
false
false
train
5c8j
E
F
0
J
protein
null
protein mj0480
MEMBRANE PROTEIN
06/25/15
A YidC-like protein in the archaeal plasma membrane
HOMO SAPIENS; METHANOCALDOCOCCUS JANNASCHII (STRAIN ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
homo sapiens
homo sapiens
methanocaldococcus jannaschii (strain atcc43067 / dsm 2661 / jal-1 / jcm 10045 / nbrc 100440)
Borowska, M.T., Dominik, P.K., Anghel, S.A., Kossiakoff, A.A., Keenan, R.J.
3.502
X-RAY DIFFRACTION
0.302
0.253
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5c8j/abangle/5c8j.abangle
sabdab_dataset/5c8j/annotation/5c8j_E_VH.ann
sabdab_dataset/5c8j/annotation/5c8j_F_VL.ann
sabdab_dataset/5c8j/imgt/5c8j_E_H.ann
sabdab_dataset/5c8j/imgt/5c8j_F_L.ann
sabdab_dataset/5c8j/sequence/5c8j_raw.pdb
sabdab_dataset/5c8j/sequence/5c8j_E_VH.fa
sabdab_dataset/5c8j/sequence/5c8j_F_VL.fa
sabdab_dataset/5c8j/structure/5c8j.pdb
sabdab_dataset/5c8j/structure/chothia/5c8j.pdb
false
false
train
5c8j
G
H
0
K
protein
null
protein mj0480
MEMBRANE PROTEIN
06/25/15
A YidC-like protein in the archaeal plasma membrane
HOMO SAPIENS; METHANOCALDOCOCCUS JANNASCHII (STRAIN ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
homo sapiens
homo sapiens
methanocaldococcus jannaschii (strain atcc43067 / dsm 2661 / jal-1 / jcm 10045 / nbrc 100440)
Borowska, M.T., Dominik, P.K., Anghel, S.A., Kossiakoff, A.A., Keenan, R.J.
3.502
X-RAY DIFFRACTION
0.302
0.253
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5c8j/abangle/5c8j.abangle
sabdab_dataset/5c8j/annotation/5c8j_G_VH.ann
sabdab_dataset/5c8j/annotation/5c8j_H_VL.ann
sabdab_dataset/5c8j/imgt/5c8j_G_H.ann
sabdab_dataset/5c8j/imgt/5c8j_H_L.ann
sabdab_dataset/5c8j/sequence/5c8j_raw.pdb
sabdab_dataset/5c8j/sequence/5c8j_G_VH.fa
sabdab_dataset/5c8j/sequence/5c8j_H_VL.fa
sabdab_dataset/5c8j/structure/5c8j.pdb
sabdab_dataset/5c8j/structure/chothia/5c8j.pdb
false
false
train
5c9k
null
A
0
null
null
null
null
IMMUNE SYSTEM
06/27/15
Crystal structure of a highly fibrillogenic Arg24Gly mutant of the Recombinant variable domain 6AJL2
HOMO SAPIENS
null
homo sapiens
null
Hernandez-Santoyo, A., Rodriguez-Romero, A., Luna-Martinez, O.D., Becerril-Lujan, B.
1.92
X-RAY DIFFRACTION
0.219
0.170
false
true
null
IGLV6
Lambda
null
null
null
null
null
null
null
sabdab_dataset/5c9k/annotation/5c9k_A_VL.ann
null
sabdab_dataset/5c9k/imgt/5c9k_A_L.ann
sabdab_dataset/5c9k/sequence/5c9k_raw.pdb
null
sabdab_dataset/5c9k/sequence/5c9k_A_VL.fa
sabdab_dataset/5c9k/structure/5c9k.pdb
sabdab_dataset/5c9k/structure/chothia/5c9k.pdb
false
false
test
5c9k
null
B
0
null
null
null
null
IMMUNE SYSTEM
06/27/15
Crystal structure of a highly fibrillogenic Arg24Gly mutant of the Recombinant variable domain 6AJL2
HOMO SAPIENS
null
homo sapiens
null
Hernandez-Santoyo, A., Rodriguez-Romero, A., Luna-Martinez, O.D., Becerril-Lujan, B.
1.92
X-RAY DIFFRACTION
0.219
0.170
false
true
null
IGLV6
Lambda
null
null
null
null
null
null
null
sabdab_dataset/5c9k/annotation/5c9k_B_VL.ann
null
sabdab_dataset/5c9k/imgt/5c9k_B_L.ann
sabdab_dataset/5c9k/sequence/5c9k_raw.pdb
null
sabdab_dataset/5c9k/sequence/5c9k_B_VL.fa
sabdab_dataset/5c9k/structure/5c9k.pdb
sabdab_dataset/5c9k/structure/chothia/5c9k.pdb
false
false
train
5c9k
null
C
0
null
null
null
null
IMMUNE SYSTEM
06/27/15
Crystal structure of a highly fibrillogenic Arg24Gly mutant of the Recombinant variable domain 6AJL2
HOMO SAPIENS
null
homo sapiens
null
Hernandez-Santoyo, A., Rodriguez-Romero, A., Luna-Martinez, O.D., Becerril-Lujan, B.
1.92
X-RAY DIFFRACTION
0.219
0.170
false
true
null
IGLV6
Lambda
null
null
null
null
null
null
null
sabdab_dataset/5c9k/annotation/5c9k_C_VL.ann
null
sabdab_dataset/5c9k/imgt/5c9k_C_L.ann
sabdab_dataset/5c9k/sequence/5c9k_raw.pdb
null
sabdab_dataset/5c9k/sequence/5c9k_C_VL.fa
sabdab_dataset/5c9k/structure/5c9k.pdb
sabdab_dataset/5c9k/structure/chothia/5c9k.pdb
false
false
train
5c9k
null
D
0
null
null
null
null
IMMUNE SYSTEM
06/27/15
Crystal structure of a highly fibrillogenic Arg24Gly mutant of the Recombinant variable domain 6AJL2
HOMO SAPIENS
null
homo sapiens
null
Hernandez-Santoyo, A., Rodriguez-Romero, A., Luna-Martinez, O.D., Becerril-Lujan, B.
1.92
X-RAY DIFFRACTION
0.219
0.170
false
true
null
IGLV6
Lambda
null
null
null
null
null
null
null
sabdab_dataset/5c9k/annotation/5c9k_D_VL.ann
null
sabdab_dataset/5c9k/imgt/5c9k_D_L.ann
sabdab_dataset/5c9k/sequence/5c9k_raw.pdb
null
sabdab_dataset/5c9k/sequence/5c9k_D_VL.fa
sabdab_dataset/5c9k/structure/5c9k.pdb
sabdab_dataset/5c9k/structure/chothia/5c9k.pdb
false
false
train
5c9k
null
E
0
null
null
null
null
IMMUNE SYSTEM
06/27/15
Crystal structure of a highly fibrillogenic Arg24Gly mutant of the Recombinant variable domain 6AJL2
HOMO SAPIENS
null
homo sapiens
null
Hernandez-Santoyo, A., Rodriguez-Romero, A., Luna-Martinez, O.D., Becerril-Lujan, B.
1.92
X-RAY DIFFRACTION
0.219
0.170
false
true
null
IGLV6
Lambda
null
null
null
null
null
null
null
sabdab_dataset/5c9k/annotation/5c9k_E_VL.ann
null
sabdab_dataset/5c9k/imgt/5c9k_E_L.ann
sabdab_dataset/5c9k/sequence/5c9k_raw.pdb
null
sabdab_dataset/5c9k/sequence/5c9k_E_VL.fa
sabdab_dataset/5c9k/structure/5c9k.pdb
sabdab_dataset/5c9k/structure/chothia/5c9k.pdb
false
false
train
5c9k
null
F
0
null
null
null
null
IMMUNE SYSTEM
06/27/15
Crystal structure of a highly fibrillogenic Arg24Gly mutant of the Recombinant variable domain 6AJL2
HOMO SAPIENS
null
homo sapiens
null
Hernandez-Santoyo, A., Rodriguez-Romero, A., Luna-Martinez, O.D., Becerril-Lujan, B.
1.92
X-RAY DIFFRACTION
0.219
0.170
false
true
null
IGLV6
Lambda
null
null
null
null
null
null
null
sabdab_dataset/5c9k/annotation/5c9k_F_VL.ann
null
sabdab_dataset/5c9k/imgt/5c9k_F_L.ann
sabdab_dataset/5c9k/sequence/5c9k_raw.pdb
null
sabdab_dataset/5c9k/sequence/5c9k_F_VL.fa
sabdab_dataset/5c9k/structure/5c9k.pdb
sabdab_dataset/5c9k/structure/chothia/5c9k.pdb
false
false
train
5c9k
null
G
0
null
null
null
null
IMMUNE SYSTEM
06/27/15
Crystal structure of a highly fibrillogenic Arg24Gly mutant of the Recombinant variable domain 6AJL2
HOMO SAPIENS
null
homo sapiens
null
Hernandez-Santoyo, A., Rodriguez-Romero, A., Luna-Martinez, O.D., Becerril-Lujan, B.
1.92
X-RAY DIFFRACTION
0.219
0.170
false
true
null
IGLV6
Lambda
null
null
null
null
null
null
null
sabdab_dataset/5c9k/annotation/5c9k_G_VL.ann
null
sabdab_dataset/5c9k/imgt/5c9k_G_L.ann
sabdab_dataset/5c9k/sequence/5c9k_raw.pdb
null
sabdab_dataset/5c9k/sequence/5c9k_G_VL.fa
sabdab_dataset/5c9k/structure/5c9k.pdb
sabdab_dataset/5c9k/structure/chothia/5c9k.pdb
false
false
train
5c9k
null
H
0
null
null
null
null
IMMUNE SYSTEM
06/27/15
Crystal structure of a highly fibrillogenic Arg24Gly mutant of the Recombinant variable domain 6AJL2
HOMO SAPIENS
null
homo sapiens
null
Hernandez-Santoyo, A., Rodriguez-Romero, A., Luna-Martinez, O.D., Becerril-Lujan, B.
1.92
X-RAY DIFFRACTION
0.219
0.170
false
true
null
IGLV6
Lambda
null
null
null
null
null
null
null
sabdab_dataset/5c9k/annotation/5c9k_H_VL.ann
null
sabdab_dataset/5c9k/imgt/5c9k_H_L.ann
sabdab_dataset/5c9k/sequence/5c9k_raw.pdb
null
sabdab_dataset/5c9k/sequence/5c9k_H_VL.fa
sabdab_dataset/5c9k/structure/5c9k.pdb
sabdab_dataset/5c9k/structure/chothia/5c9k.pdb
false
false
train
5cba
A
B
0
E
protein
null
c-x-c motif chemokine 13
IMMUNE SYSTEM
06/30/15
3B4 in complex with CXCL13 - 3B4-CXCL13
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Tu, C., Bard, J., Mosyak, L.
2.5
X-RAY DIFFRACTION
0.237
0.197
true
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/5cba/abangle/5cba.abangle
sabdab_dataset/5cba/annotation/5cba_A_VH.ann
sabdab_dataset/5cba/annotation/5cba_B_VL.ann
sabdab_dataset/5cba/imgt/5cba_A_H.ann
sabdab_dataset/5cba/imgt/5cba_B_L.ann
sabdab_dataset/5cba/sequence/5cba_raw.pdb
sabdab_dataset/5cba/sequence/5cba_A_VH.fa
sabdab_dataset/5cba/sequence/5cba_B_VL.fa
sabdab_dataset/5cba/structure/5cba.pdb
sabdab_dataset/5cba/structure/chothia/5cba.pdb
false
false
test
5cba
C
D
0
F
protein
null
c-x-c motif chemokine 13
IMMUNE SYSTEM
06/30/15
3B4 in complex with CXCL13 - 3B4-CXCL13
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Tu, C., Bard, J., Mosyak, L.
2.5
X-RAY DIFFRACTION
0.237
0.197
true
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/5cba/abangle/5cba.abangle
sabdab_dataset/5cba/annotation/5cba_C_VH.ann
sabdab_dataset/5cba/annotation/5cba_D_VL.ann
sabdab_dataset/5cba/imgt/5cba_C_H.ann
sabdab_dataset/5cba/imgt/5cba_D_L.ann
sabdab_dataset/5cba/sequence/5cba_raw.pdb
sabdab_dataset/5cba/sequence/5cba_C_VH.fa
sabdab_dataset/5cba/sequence/5cba_D_VL.fa
sabdab_dataset/5cba/structure/5cba.pdb
sabdab_dataset/5cba/structure/chothia/5cba.pdb
false
false
validation
5cbe
A
B
0
E
protein
null
c-x-c motif chemokine 13
IMMUNE SYSTEM
06/30/15
E10 in complex with CXCL13
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Tu, C., Bard, J., Mosyak, L.
2.4
X-RAY DIFFRACTION
0.275
0.248
true
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/5cbe/abangle/5cbe.abangle
sabdab_dataset/5cbe/annotation/5cbe_A_VH.ann
sabdab_dataset/5cbe/annotation/5cbe_B_VL.ann
sabdab_dataset/5cbe/imgt/5cbe_A_H.ann
sabdab_dataset/5cbe/imgt/5cbe_B_L.ann
sabdab_dataset/5cbe/sequence/5cbe_raw.pdb
sabdab_dataset/5cbe/sequence/5cbe_A_VH.fa
sabdab_dataset/5cbe/sequence/5cbe_B_VL.fa
sabdab_dataset/5cbe/structure/5cbe.pdb
sabdab_dataset/5cbe/structure/chothia/5cbe.pdb
true
true
validation
5cbe
C
D
0
F
protein
null
c-x-c motif chemokine 13
IMMUNE SYSTEM
06/30/15
E10 in complex with CXCL13
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Tu, C., Bard, J., Mosyak, L.
2.4
X-RAY DIFFRACTION
0.275
0.248
true
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/5cbe/abangle/5cbe.abangle
sabdab_dataset/5cbe/annotation/5cbe_C_VH.ann
sabdab_dataset/5cbe/annotation/5cbe_D_VL.ann
sabdab_dataset/5cbe/imgt/5cbe_C_H.ann
sabdab_dataset/5cbe/imgt/5cbe_D_L.ann
sabdab_dataset/5cbe/sequence/5cbe_raw.pdb
sabdab_dataset/5cbe/sequence/5cbe_C_VH.fa
sabdab_dataset/5cbe/sequence/5cbe_D_VL.fa
sabdab_dataset/5cbe/structure/5cbe.pdb
sabdab_dataset/5cbe/structure/chothia/5cbe.pdb
true
false
validation
5cck
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/02/15
Crystal structure of Human anti-HIV-1 broadly neutralizing antibody 3BC315 Fab
HOMO SAPIENS
homo sapiens
homo sapiens
null
Lee, J.H., Ward, A.B., Wilson, I.A.
1.95
X-RAY DIFFRACTION
0.207
0.156
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/5cck/abangle/5cck.abangle
sabdab_dataset/5cck/annotation/5cck_H_VH.ann
sabdab_dataset/5cck/annotation/5cck_L_VL.ann
sabdab_dataset/5cck/imgt/5cck_H_H.ann
sabdab_dataset/5cck/imgt/5cck_L_L.ann
sabdab_dataset/5cck/sequence/5cck_raw.pdb
sabdab_dataset/5cck/sequence/5cck_H_VH.fa
sabdab_dataset/5cck/sequence/5cck_L_VL.fa
sabdab_dataset/5cck/structure/5cck.pdb
sabdab_dataset/5cck/structure/chothia/5cck.pdb
true
false
train
5cd3
A
B
0
null
null
null
null
IMMUNE SYSTEM
07/02/15
Structure of immature VRC01-class antibody DRVIA7
HOMO SAPIENS
homo sapiens
homo sapiens
null
Kong, L., Wilson, I.A.
2.9
X-RAY DIFFRACTION
0.284
0.234
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cd3/abangle/5cd3.abangle
sabdab_dataset/5cd3/annotation/5cd3_A_VH.ann
sabdab_dataset/5cd3/annotation/5cd3_B_VL.ann
sabdab_dataset/5cd3/imgt/5cd3_A_H.ann
sabdab_dataset/5cd3/imgt/5cd3_B_L.ann
sabdab_dataset/5cd3/sequence/5cd3_raw.pdb
sabdab_dataset/5cd3/sequence/5cd3_A_VH.fa
sabdab_dataset/5cd3/sequence/5cd3_B_VL.fa
sabdab_dataset/5cd3/structure/5cd3.pdb
sabdab_dataset/5cd3/structure/chothia/5cd3.pdb
true
false
train
5cd3
C
D
0
null
null
null
null
IMMUNE SYSTEM
07/02/15
Structure of immature VRC01-class antibody DRVIA7
HOMO SAPIENS
homo sapiens
homo sapiens
null
Kong, L., Wilson, I.A.
2.9
X-RAY DIFFRACTION
0.284
0.234
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cd3/abangle/5cd3.abangle
sabdab_dataset/5cd3/annotation/5cd3_C_VH.ann
sabdab_dataset/5cd3/annotation/5cd3_D_VL.ann
sabdab_dataset/5cd3/imgt/5cd3_C_H.ann
sabdab_dataset/5cd3/imgt/5cd3_D_L.ann
sabdab_dataset/5cd3/sequence/5cd3_raw.pdb
sabdab_dataset/5cd3/sequence/5cd3_C_VH.fa
sabdab_dataset/5cd3/sequence/5cd3_D_VL.fa
sabdab_dataset/5cd3/structure/5cd3.pdb
sabdab_dataset/5cd3/structure/chothia/5cd3.pdb
true
false
train
5cd3
E
F
0
null
null
null
null
IMMUNE SYSTEM
07/02/15
Structure of immature VRC01-class antibody DRVIA7
HOMO SAPIENS
homo sapiens
homo sapiens
null
Kong, L., Wilson, I.A.
2.9
X-RAY DIFFRACTION
0.284
0.234
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cd3/abangle/5cd3.abangle
sabdab_dataset/5cd3/annotation/5cd3_E_VH.ann
sabdab_dataset/5cd3/annotation/5cd3_F_VL.ann
sabdab_dataset/5cd3/imgt/5cd3_E_H.ann
sabdab_dataset/5cd3/imgt/5cd3_F_L.ann
sabdab_dataset/5cd3/sequence/5cd3_raw.pdb
sabdab_dataset/5cd3/sequence/5cd3_E_VH.fa
sabdab_dataset/5cd3/sequence/5cd3_F_VL.fa
sabdab_dataset/5cd3/structure/5cd3.pdb
sabdab_dataset/5cd3/structure/chothia/5cd3.pdb
true
false
train
5cd3
G
H
0
null
null
null
null
IMMUNE SYSTEM
07/02/15
Structure of immature VRC01-class antibody DRVIA7
HOMO SAPIENS
homo sapiens
homo sapiens
null
Kong, L., Wilson, I.A.
2.9
X-RAY DIFFRACTION
0.284
0.234
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cd3/abangle/5cd3.abangle
sabdab_dataset/5cd3/annotation/5cd3_G_VH.ann
sabdab_dataset/5cd3/annotation/5cd3_H_VL.ann
sabdab_dataset/5cd3/imgt/5cd3_G_H.ann
sabdab_dataset/5cd3/imgt/5cd3_H_L.ann
sabdab_dataset/5cd3/sequence/5cd3_raw.pdb
sabdab_dataset/5cd3/sequence/5cd3_G_VH.fa
sabdab_dataset/5cd3/sequence/5cd3_H_VL.fa
sabdab_dataset/5cd3/structure/5cd3.pdb
sabdab_dataset/5cd3/structure/chothia/5cd3.pdb
true
false
train
5cd5
C
D
0
A
protein
null
93th057 hiv-1 gp120 core
IMMUNE SYSTEM
07/03/15
Crystal structure of an immature VRC01-class antibody DRVIA7 from a Chinese donor bound to clade A/E HIV-1 gp120 core
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Kong, L., Wilson, I.A.
3.396
X-RAY DIFFRACTION
0.306
0.253
false
true
unknown
IGKV1
Kappa
0
-8.920931
SPR
null
TBD
sabdab_dataset/5cd5/abangle/5cd5.abangle
sabdab_dataset/5cd5/annotation/5cd5_C_VH.ann
sabdab_dataset/5cd5/annotation/5cd5_D_VL.ann
sabdab_dataset/5cd5/imgt/5cd5_C_H.ann
sabdab_dataset/5cd5/imgt/5cd5_D_L.ann
sabdab_dataset/5cd5/sequence/5cd5_raw.pdb
sabdab_dataset/5cd5/sequence/5cd5_C_VH.fa
sabdab_dataset/5cd5/sequence/5cd5_D_VL.fa
sabdab_dataset/5cd5/structure/5cd5.pdb
sabdab_dataset/5cd5/structure/chothia/5cd5.pdb
false
false
train
5cex
B
A
0
null
null
null
null
IMMUNE SYSTEM
07/07/15
Crystal Structure of Fab 32H+109L, a putative precursor of the PGT121 family of potent HIV-1 antibodies
HOMO SAPIENS
homo sapiens
homo sapiens
null
Garces, F., Wilson, I.A.
2.105
X-RAY DIFFRACTION
0.244
0.200
false
true
IGHV4
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/5cex/abangle/5cex.abangle
sabdab_dataset/5cex/annotation/5cex_B_VH.ann
sabdab_dataset/5cex/annotation/5cex_A_VL.ann
sabdab_dataset/5cex/imgt/5cex_B_H.ann
sabdab_dataset/5cex/imgt/5cex_A_L.ann
sabdab_dataset/5cex/sequence/5cex_raw.pdb
sabdab_dataset/5cex/sequence/5cex_B_VH.fa
sabdab_dataset/5cex/sequence/5cex_A_VL.fa
sabdab_dataset/5cex/structure/5cex.pdb
sabdab_dataset/5cex/structure/chothia/5cex.pdb
true
false
train
5cex
D
C
0
null
null
null
null
IMMUNE SYSTEM
07/07/15
Crystal Structure of Fab 32H+109L, a putative precursor of the PGT121 family of potent HIV-1 antibodies
HOMO SAPIENS
homo sapiens
homo sapiens
null
Garces, F., Wilson, I.A.
2.105
X-RAY DIFFRACTION
0.244
0.200
false
true
IGHV4
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/5cex/abangle/5cex.abangle
sabdab_dataset/5cex/annotation/5cex_D_VH.ann
sabdab_dataset/5cex/annotation/5cex_C_VL.ann
sabdab_dataset/5cex/imgt/5cex_D_H.ann
sabdab_dataset/5cex/imgt/5cex_C_L.ann
sabdab_dataset/5cex/sequence/5cex_raw.pdb
sabdab_dataset/5cex/sequence/5cex_D_VH.fa
sabdab_dataset/5cex/sequence/5cex_C_VL.fa
sabdab_dataset/5cex/structure/5cex.pdb
sabdab_dataset/5cex/structure/chothia/5cex.pdb
true
false
train
5cey
B
A
0
null
null
null
null
IMMUNE SYSTEM
07/07/15
Crystal Structure of Fab 9H+3L, a putative precursor of the PGT121 family of potent HIV-1 antibodies
HOMO SAPIENS
homo sapiens
homo sapiens
null
Wilson, I.A., Garces, F.
2.387
X-RAY DIFFRACTION
0.273
0.224
false
true
IGHV4
unknown
unknown
null
null
null
null
null
sabdab_dataset/5cey/abangle/5cey.abangle
sabdab_dataset/5cey/annotation/5cey_B_VH.ann
sabdab_dataset/5cey/annotation/5cey_A_VL.ann
sabdab_dataset/5cey/imgt/5cey_B_H.ann
sabdab_dataset/5cey/imgt/5cey_A_L.ann
sabdab_dataset/5cey/sequence/5cey_raw.pdb
sabdab_dataset/5cey/sequence/5cey_B_VH.fa
sabdab_dataset/5cey/sequence/5cey_A_VL.fa
sabdab_dataset/5cey/structure/5cey.pdb
sabdab_dataset/5cey/structure/chothia/5cey.pdb
false
false
train
5cey
D
C
0
null
null
null
null
IMMUNE SYSTEM
07/07/15
Crystal Structure of Fab 9H+3L, a putative precursor of the PGT121 family of potent HIV-1 antibodies
HOMO SAPIENS
homo sapiens
homo sapiens
null
Wilson, I.A., Garces, F.
2.387
X-RAY DIFFRACTION
0.273
0.224
false
true
IGHV4
unknown
unknown
null
null
null
null
null
sabdab_dataset/5cey/abangle/5cey.abangle
sabdab_dataset/5cey/annotation/5cey_D_VH.ann
sabdab_dataset/5cey/annotation/5cey_C_VL.ann
sabdab_dataset/5cey/imgt/5cey_D_H.ann
sabdab_dataset/5cey/imgt/5cey_C_L.ann
sabdab_dataset/5cey/sequence/5cey_raw.pdb
sabdab_dataset/5cey/sequence/5cey_D_VH.fa
sabdab_dataset/5cey/sequence/5cey_C_VL.fa
sabdab_dataset/5cey/structure/5cey.pdb
sabdab_dataset/5cey/structure/chothia/5cey.pdb
false
false
train
5cez
D
E
0
B
protein
null
envelope glycoprotein gp160
VIRAL PROTEIN/IMMUNE SYSTEM
07/08/15
Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with an early putative precursor of the PGT121 family at 3.0 Angstrom
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Wilson, I.A., Garces, F.
3.031
X-RAY DIFFRACTION
0.266
0.233
false
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/5cez/abangle/5cez.abangle
sabdab_dataset/5cez/annotation/5cez_D_VH.ann
sabdab_dataset/5cez/annotation/5cez_E_VL.ann
sabdab_dataset/5cez/imgt/5cez_D_H.ann
sabdab_dataset/5cez/imgt/5cez_E_L.ann
sabdab_dataset/5cez/sequence/5cez_raw.pdb
sabdab_dataset/5cez/sequence/5cez_D_VH.fa
sabdab_dataset/5cez/sequence/5cez_E_VL.fa
sabdab_dataset/5cez/structure/5cez.pdb
sabdab_dataset/5cez/structure/chothia/5cez.pdb
false
false
train
5cez
H
L
0
G
protein
null
envelope glycoprotein gp160
VIRAL PROTEIN/IMMUNE SYSTEM
07/08/15
Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with an early putative precursor of the PGT121 family at 3.0 Angstrom
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Wilson, I.A., Garces, F.
3.031
X-RAY DIFFRACTION
0.266
0.233
false
true
IGHV4
unknown
unknown
null
null
null
null
null
sabdab_dataset/5cez/abangle/5cez.abangle
sabdab_dataset/5cez/annotation/5cez_H_VH.ann
sabdab_dataset/5cez/annotation/5cez_L_VL.ann
sabdab_dataset/5cez/imgt/5cez_H_H.ann
sabdab_dataset/5cez/imgt/5cez_L_L.ann
sabdab_dataset/5cez/sequence/5cez_raw.pdb
sabdab_dataset/5cez/sequence/5cez_H_VH.fa
sabdab_dataset/5cez/sequence/5cez_L_VL.fa
sabdab_dataset/5cez/structure/5cez.pdb
sabdab_dataset/5cez/structure/chothia/5cez.pdb
false
false
train
5cgy
C
D
0
null
null
null
null
IMMUNE SYSTEM
07/09/15
Fab fragment of Chikungunya virus neutralizing human monoclonal antibody 4J21
HOMO SAPIENS
homo sapiens
homo sapiens
null
Long, F., Crowe, J.E., Rossmann, M.G.
2.07
X-RAY DIFFRACTION
0.216
0.168
false
false
IGHV7
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5cgy/abangle/5cgy.abangle
sabdab_dataset/5cgy/annotation/5cgy_C_VH.ann
sabdab_dataset/5cgy/annotation/5cgy_D_VL.ann
sabdab_dataset/5cgy/imgt/5cgy_C_H.ann
sabdab_dataset/5cgy/imgt/5cgy_D_L.ann
sabdab_dataset/5cgy/sequence/5cgy_raw.pdb
sabdab_dataset/5cgy/sequence/5cgy_C_VH.fa
sabdab_dataset/5cgy/sequence/5cgy_D_VL.fa
sabdab_dataset/5cgy/structure/5cgy.pdb
sabdab_dataset/5cgy/structure/chothia/5cgy.pdb
true
false
train
5cgy
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/09/15
Fab fragment of Chikungunya virus neutralizing human monoclonal antibody 4J21
HOMO SAPIENS
homo sapiens
homo sapiens
null
Long, F., Crowe, J.E., Rossmann, M.G.
2.07
X-RAY DIFFRACTION
0.216
0.168
false
false
IGHV7
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5cgy/abangle/5cgy.abangle
sabdab_dataset/5cgy/annotation/5cgy_H_VH.ann
sabdab_dataset/5cgy/annotation/5cgy_L_VL.ann
sabdab_dataset/5cgy/imgt/5cgy_H_H.ann
sabdab_dataset/5cgy/imgt/5cgy_L_L.ann
sabdab_dataset/5cgy/sequence/5cgy_raw.pdb
sabdab_dataset/5cgy/sequence/5cgy_H_VH.fa
sabdab_dataset/5cgy/sequence/5cgy_L_VL.fa
sabdab_dataset/5cgy/structure/5cgy.pdb
sabdab_dataset/5cgy/structure/chothia/5cgy.pdb
true
false
train
5chn
A
B
0
null
null
null
null
IMMUNE SYSTEM
07/10/15
Fab fragments of chikungunya virus neutralizing human monoclonal antibody 5M16
HOMO SAPIENS
homo sapiens
homo sapiens
null
Long, F., Crowe, J.E., Rossmann, M.G.
2.047
X-RAY DIFFRACTION
0.218
0.172
false
false
IGHV1
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/5chn/abangle/5chn.abangle
sabdab_dataset/5chn/annotation/5chn_A_VH.ann
sabdab_dataset/5chn/annotation/5chn_B_VL.ann
sabdab_dataset/5chn/imgt/5chn_A_H.ann
sabdab_dataset/5chn/imgt/5chn_B_L.ann
sabdab_dataset/5chn/sequence/5chn_raw.pdb
sabdab_dataset/5chn/sequence/5chn_A_VH.fa
sabdab_dataset/5chn/sequence/5chn_B_VL.fa
sabdab_dataset/5chn/structure/5chn.pdb
sabdab_dataset/5chn/structure/chothia/5chn.pdb
true
false
train
5chn
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/10/15
Fab fragments of chikungunya virus neutralizing human monoclonal antibody 5M16
HOMO SAPIENS
homo sapiens
homo sapiens
null
Long, F., Crowe, J.E., Rossmann, M.G.
2.047
X-RAY DIFFRACTION
0.218
0.172
false
false
IGHV1
IGKV2
Kappa
null
null
null
null
null
sabdab_dataset/5chn/abangle/5chn.abangle
sabdab_dataset/5chn/annotation/5chn_H_VH.ann
sabdab_dataset/5chn/annotation/5chn_L_VL.ann
sabdab_dataset/5chn/imgt/5chn_H_H.ann
sabdab_dataset/5chn/imgt/5chn_L_L.ann
sabdab_dataset/5chn/sequence/5chn_raw.pdb
sabdab_dataset/5chn/sequence/5chn_H_VH.fa
sabdab_dataset/5chn/sequence/5chn_L_VL.fa
sabdab_dataset/5chn/structure/5chn.pdb
sabdab_dataset/5chn/structure/chothia/5chn.pdb
true
false
test
5cil
H
L
0
P
peptide
null
peptide from the mper region of the env protein of hiv-1
IMMUNE SYSTEM
07/13/15
Crystal Structure of non-neutralizing version of 4E10 (WDWD) with epitope bound
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Caaveiro, J.M.M., Rujas, E., Nieva, J.L., Tsumoto, K.
1.81
X-RAY DIFFRACTION
0.188
0.163
false
true
IGHV1
IGKV3
Kappa
0
-10.077966
Unknown
null
TBD
sabdab_dataset/5cil/abangle/5cil.abangle
sabdab_dataset/5cil/annotation/5cil_H_VH.ann
sabdab_dataset/5cil/annotation/5cil_L_VL.ann
sabdab_dataset/5cil/imgt/5cil_H_H.ann
sabdab_dataset/5cil/imgt/5cil_L_L.ann
sabdab_dataset/5cil/sequence/5cil_raw.pdb
sabdab_dataset/5cil/sequence/5cil_H_VH.fa
sabdab_dataset/5cil/sequence/5cil_L_VL.fa
sabdab_dataset/5cil/structure/5cil.pdb
sabdab_dataset/5cil/structure/chothia/5cil.pdb
false
false
validation
5cin
H
L
0
P
peptide
null
peptide from mper region of hiv-1 env
IMMUNE SYSTEM
07/13/15
Crystal Structure of non-neutralizing version of 4E10 (DeltaLoop) with epitope bound
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Caaveiro, J.M.M., Rujas, E., Nieva, J.L., Tsumoto, K.
1.7
X-RAY DIFFRACTION
0.178
0.148
false
true
IGHV1
IGKV3
Kappa
0
-10.565699
Unknown
null
TBD
sabdab_dataset/5cin/abangle/5cin.abangle
sabdab_dataset/5cin/annotation/5cin_H_VH.ann
sabdab_dataset/5cin/annotation/5cin_L_VL.ann
sabdab_dataset/5cin/imgt/5cin_H_H.ann
sabdab_dataset/5cin/imgt/5cin_L_L.ann
sabdab_dataset/5cin/sequence/5cin_raw.pdb
sabdab_dataset/5cin/sequence/5cin_H_VH.fa
sabdab_dataset/5cin/sequence/5cin_L_VL.fa
sabdab_dataset/5cin/structure/5cin.pdb
sabdab_dataset/5cin/structure/chothia/5cin.pdb
false
false
train
5cip
A
B
0
null
null
null
null
IMMUNE SYSTEM
07/13/15
Crystal Structure of Unbound 4E10
HOMO SAPIENS
homo sapiens
homo sapiens
null
Caaveiro, J.M.M., Rujas, E., Nieva, J.L., Tsumoto, K.
2.48
X-RAY DIFFRACTION
0.231
0.183
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/5cip/abangle/5cip.abangle
sabdab_dataset/5cip/annotation/5cip_A_VH.ann
sabdab_dataset/5cip/annotation/5cip_B_VL.ann
sabdab_dataset/5cip/imgt/5cip_A_H.ann
sabdab_dataset/5cip/imgt/5cip_B_L.ann
sabdab_dataset/5cip/sequence/5cip_raw.pdb
sabdab_dataset/5cip/sequence/5cip_A_VH.fa
sabdab_dataset/5cip/sequence/5cip_B_VL.fa
sabdab_dataset/5cip/structure/5cip.pdb
sabdab_dataset/5cip/structure/chothia/5cip.pdb
false
false
train
5cip
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/13/15
Crystal Structure of Unbound 4E10
HOMO SAPIENS
homo sapiens
homo sapiens
null
Caaveiro, J.M.M., Rujas, E., Nieva, J.L., Tsumoto, K.
2.48
X-RAY DIFFRACTION
0.231
0.183
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/5cip/abangle/5cip.abangle
sabdab_dataset/5cip/annotation/5cip_H_VH.ann
sabdab_dataset/5cip/annotation/5cip_L_VL.ann
sabdab_dataset/5cip/imgt/5cip_H_H.ann
sabdab_dataset/5cip/imgt/5cip_L_L.ann
sabdab_dataset/5cip/sequence/5cip_raw.pdb
sabdab_dataset/5cip/sequence/5cip_H_VH.fa
sabdab_dataset/5cip/sequence/5cip_L_VL.fa
sabdab_dataset/5cip/structure/5cip.pdb
sabdab_dataset/5cip/structure/chothia/5cip.pdb
false
false
train
5cjo
H
L
0
A
protein
null
insulin
HYDROLASE/HYDROLASE INHIBITOR
07/14/15
Crystal Structure Analysis of Elbow-Engineered-Fab-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Insulin
MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
liang, w.g., bailey, L., tang, w.j.
3.287
X-RAY DIFFRACTION
0.245
0.196
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cjo/abangle/5cjo.abangle
sabdab_dataset/5cjo/annotation/5cjo_H_VH.ann
sabdab_dataset/5cjo/annotation/5cjo_L_VL.ann
sabdab_dataset/5cjo/imgt/5cjo_H_H.ann
sabdab_dataset/5cjo/imgt/5cjo_L_L.ann
sabdab_dataset/5cjo/sequence/5cjo_raw.pdb
sabdab_dataset/5cjo/sequence/5cjo_H_VH.fa
sabdab_dataset/5cjo/sequence/5cjo_L_VL.fa
sabdab_dataset/5cjo/structure/5cjo.pdb
sabdab_dataset/5cjo/structure/chothia/5cjo.pdb
false
false
train
5cjq
H
L
0
B | A
protein | protein
NA | NA
designed influenza hemagglutinin stem #4900, ha2 | designed influenza hemagglutinin stem #4900, ha1
VIRAL PROTEIN/IMMUNE SYSTEM
07/14/15
Crystal structure of a trimeric influenza hemagglutinin stem in complex with an broadly neutralizing antibody CR9114
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
synthetic construct | synthetic construct
Zhu, X., Wilson, I.A.
3.6
X-RAY DIFFRACTION
0.369
0.346
false
true
IGHV1
IGLV1
Lambda
0
-12.688875
BLI
null
TBD
sabdab_dataset/5cjq/abangle/5cjq.abangle
sabdab_dataset/5cjq/annotation/5cjq_H_VH.ann
sabdab_dataset/5cjq/annotation/5cjq_L_VL.ann
sabdab_dataset/5cjq/imgt/5cjq_H_H.ann
sabdab_dataset/5cjq/imgt/5cjq_L_L.ann
sabdab_dataset/5cjq/sequence/5cjq_raw.pdb
sabdab_dataset/5cjq/sequence/5cjq_H_VH.fa
sabdab_dataset/5cjq/sequence/5cjq_L_VL.fa
sabdab_dataset/5cjq/structure/5cjq.pdb
sabdab_dataset/5cjq/structure/chothia/5cjq.pdb
false
false
train
5cjs
F
E
0
K | J
protein | protein
NA | NA
designed influenza hemagglutinin stem #4454, ha2 | designed influenza hemagglutinin stem #4454, ha1
VIRAL PROTEIN/IMMUNE SYSTEM
07/15/15
Crystal structure of a monomeric influenza hemagglutinin stem in complex with an broadly neutralizing antibody CR9114
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
synthetic construct | synthetic construct
Zhu, X., Wilson, I.A.
4.3
X-RAY DIFFRACTION
0.303
0.262
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5cjs/abangle/5cjs.abangle
sabdab_dataset/5cjs/annotation/5cjs_F_VH.ann
sabdab_dataset/5cjs/annotation/5cjs_E_VL.ann
sabdab_dataset/5cjs/imgt/5cjs_F_H.ann
sabdab_dataset/5cjs/imgt/5cjs_E_L.ann
sabdab_dataset/5cjs/sequence/5cjs_raw.pdb
sabdab_dataset/5cjs/sequence/5cjs_F_VH.fa
sabdab_dataset/5cjs/sequence/5cjs_E_VL.fa
sabdab_dataset/5cjs/structure/5cjs.pdb
sabdab_dataset/5cjs/structure/chothia/5cjs.pdb
false
false
train
5cjs
H
L
0
D | C
protein | protein
NA | NA
designed influenza hemagglutinin stem #4454, ha2 | designed influenza hemagglutinin stem #4454, ha1
VIRAL PROTEIN/IMMUNE SYSTEM
07/15/15
Crystal structure of a monomeric influenza hemagglutinin stem in complex with an broadly neutralizing antibody CR9114
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
synthetic construct | synthetic construct
Zhu, X., Wilson, I.A.
4.3
X-RAY DIFFRACTION
0.303
0.262
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5cjs/abangle/5cjs.abangle
sabdab_dataset/5cjs/annotation/5cjs_H_VH.ann
sabdab_dataset/5cjs/annotation/5cjs_L_VL.ann
sabdab_dataset/5cjs/imgt/5cjs_H_H.ann
sabdab_dataset/5cjs/imgt/5cjs_L_L.ann
sabdab_dataset/5cjs/sequence/5cjs_raw.pdb
sabdab_dataset/5cjs/sequence/5cjs_H_VH.fa
sabdab_dataset/5cjs/sequence/5cjs_L_VL.fa
sabdab_dataset/5cjs/structure/5cjs.pdb
sabdab_dataset/5cjs/structure/chothia/5cjs.pdb
false
false
test
5cjx
A
C
0
J | K
protein | protein
NA | NA
bg505 env gp41 | bg505 env gp120
VIRAL PROTEIN/IMMUNE SYSTEM
07/15/15
Crystal structure of 8ANC195 Fab in complex with BG505 SOSIP.664 HIV-1 Env trimer
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1 | human immunodeficiency virus 1
Scharf, L., Bjorkman, P.J.
3.584
X-RAY DIFFRACTION
0.286
0.239
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cjx/abangle/5cjx.abangle
sabdab_dataset/5cjx/annotation/5cjx_A_VH.ann
sabdab_dataset/5cjx/annotation/5cjx_C_VL.ann
sabdab_dataset/5cjx/imgt/5cjx_A_H.ann
sabdab_dataset/5cjx/imgt/5cjx_C_L.ann
sabdab_dataset/5cjx/sequence/5cjx_raw.pdb
sabdab_dataset/5cjx/sequence/5cjx_A_VH.fa
sabdab_dataset/5cjx/sequence/5cjx_C_VL.fa
sabdab_dataset/5cjx/structure/5cjx.pdb
sabdab_dataset/5cjx/structure/chothia/5cjx.pdb
false
false
train
5cjx
D
E
0
X | Y
protein | protein
NA | NA
bg505 env gp41 | bg505 env gp120
VIRAL PROTEIN/IMMUNE SYSTEM
07/15/15
Crystal structure of 8ANC195 Fab in complex with BG505 SOSIP.664 HIV-1 Env trimer
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1 | human immunodeficiency virus 1
Scharf, L., Bjorkman, P.J.
3.584
X-RAY DIFFRACTION
0.286
0.239
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cjx/abangle/5cjx.abangle
sabdab_dataset/5cjx/annotation/5cjx_D_VH.ann
sabdab_dataset/5cjx/annotation/5cjx_E_VL.ann
sabdab_dataset/5cjx/imgt/5cjx_D_H.ann
sabdab_dataset/5cjx/imgt/5cjx_E_L.ann
sabdab_dataset/5cjx/sequence/5cjx_raw.pdb
sabdab_dataset/5cjx/sequence/5cjx_D_VH.fa
sabdab_dataset/5cjx/sequence/5cjx_E_VL.fa
sabdab_dataset/5cjx/structure/5cjx.pdb
sabdab_dataset/5cjx/structure/chothia/5cjx.pdb
false
false
train
5cjx
H
L
0
B | G
protein | protein
NA | NA
bg505 env gp41 | bg505 env gp120
VIRAL PROTEIN/IMMUNE SYSTEM
07/15/15
Crystal structure of 8ANC195 Fab in complex with BG505 SOSIP.664 HIV-1 Env trimer
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1 | human immunodeficiency virus 1
Scharf, L., Bjorkman, P.J.
3.584
X-RAY DIFFRACTION
0.286
0.239
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cjx/abangle/5cjx.abangle
sabdab_dataset/5cjx/annotation/5cjx_H_VH.ann
sabdab_dataset/5cjx/annotation/5cjx_L_VL.ann
sabdab_dataset/5cjx/imgt/5cjx_H_H.ann
sabdab_dataset/5cjx/imgt/5cjx_L_L.ann
sabdab_dataset/5cjx/sequence/5cjx_raw.pdb
sabdab_dataset/5cjx/sequence/5cjx_H_VH.fa
sabdab_dataset/5cjx/sequence/5cjx_L_VL.fa
sabdab_dataset/5cjx/structure/5cjx.pdb
sabdab_dataset/5cjx/structure/chothia/5cjx.pdb
false
false
train
5cma
B
A
0
null
null
null
null
IMMUNE SYSTEM
07/16/15
Anti-B7-H3 monoclonal antibody ch8H9 Fab fragment
MUS MUSCULUS
mus musculus
mus musculus
null
Ahmed, M., Goldgur, Y., Cheng, M., Cheung, N.K.
2.5
X-RAY DIFFRACTION
0.261
0.208
false
true
IGHV1
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/5cma/abangle/5cma.abangle
sabdab_dataset/5cma/annotation/5cma_B_VH.ann
sabdab_dataset/5cma/annotation/5cma_A_VL.ann
sabdab_dataset/5cma/imgt/5cma_B_H.ann
sabdab_dataset/5cma/imgt/5cma_A_L.ann
sabdab_dataset/5cma/sequence/5cma_raw.pdb
sabdab_dataset/5cma/sequence/5cma_B_VH.fa
sabdab_dataset/5cma/sequence/5cma_A_VL.fa
sabdab_dataset/5cma/structure/5cma.pdb
sabdab_dataset/5cma/structure/chothia/5cma.pdb
true
false
train
5cp3
H
A
0
A
Hapten
YTZ
4-AMINO-N-(1,3-THIAZOL-2-YL)BENZENESULFONAMIDE
IMMUNE SYSTEM
07/21/15
Crystal Structure of an Antigen-Binding Fragment of Monoclonal Antibody against Sulfonamides in Complex with Sulfathiazole
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Wang, Z., Shen, J., Li, C., Li, Y., Wen, K., Yu, X., Zhang, X.
1.99
X-RAY DIFFRACTION
0.266
0.214
false
false
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cp3/abangle/5cp3.abangle
sabdab_dataset/5cp3/annotation/5cp3_H_VH.ann
sabdab_dataset/5cp3/annotation/5cp3_A_VL.ann
sabdab_dataset/5cp3/imgt/5cp3_H_H.ann
sabdab_dataset/5cp3/imgt/5cp3_A_L.ann
sabdab_dataset/5cp3/sequence/5cp3_raw.pdb
sabdab_dataset/5cp3/sequence/5cp3_H_VH.fa
sabdab_dataset/5cp3/sequence/5cp3_A_VL.fa
sabdab_dataset/5cp3/structure/5cp3.pdb
sabdab_dataset/5cp3/structure/chothia/5cp3.pdb
true
false
validation
5cp7
B
C
0
null
null
null
null
IMMUNE SYSTEM
07/21/15
Crystal Structure of an Antigen-Binding Fragment of Monoclonal Antibody against Sulfonamides
MUS MUSCULUS
mus musculus
mus musculus
null
Wang, Z., Shen, J., Li, C., Li, Y., Wen, K., Yu, X., Zhang, X.
3.01
X-RAY DIFFRACTION
0.302
0.260
false
false
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cp7/abangle/5cp7.abangle
sabdab_dataset/5cp7/annotation/5cp7_B_VH.ann
sabdab_dataset/5cp7/annotation/5cp7_C_VL.ann
sabdab_dataset/5cp7/imgt/5cp7_B_H.ann
sabdab_dataset/5cp7/imgt/5cp7_C_L.ann
sabdab_dataset/5cp7/sequence/5cp7_raw.pdb
sabdab_dataset/5cp7/sequence/5cp7_B_VH.fa
sabdab_dataset/5cp7/sequence/5cp7_C_VL.fa
sabdab_dataset/5cp7/structure/5cp7.pdb
sabdab_dataset/5cp7/structure/chothia/5cp7.pdb
false
false
train
5cp7
D
E
0
null
null
null
null
IMMUNE SYSTEM
07/21/15
Crystal Structure of an Antigen-Binding Fragment of Monoclonal Antibody against Sulfonamides
MUS MUSCULUS
mus musculus
mus musculus
null
Wang, Z., Shen, J., Li, C., Li, Y., Wen, K., Yu, X., Zhang, X.
3.01
X-RAY DIFFRACTION
0.302
0.260
false
false
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cp7/abangle/5cp7.abangle
sabdab_dataset/5cp7/annotation/5cp7_D_VH.ann
sabdab_dataset/5cp7/annotation/5cp7_E_VL.ann
sabdab_dataset/5cp7/imgt/5cp7_D_H.ann
sabdab_dataset/5cp7/imgt/5cp7_E_L.ann
sabdab_dataset/5cp7/sequence/5cp7_raw.pdb
sabdab_dataset/5cp7/sequence/5cp7_D_VH.fa
sabdab_dataset/5cp7/sequence/5cp7_E_VL.fa
sabdab_dataset/5cp7/structure/5cp7.pdb
sabdab_dataset/5cp7/structure/chothia/5cp7.pdb
false
false
train
5cp7
F
G
0
null
null
null
null
IMMUNE SYSTEM
07/21/15
Crystal Structure of an Antigen-Binding Fragment of Monoclonal Antibody against Sulfonamides
MUS MUSCULUS
mus musculus
mus musculus
null
Wang, Z., Shen, J., Li, C., Li, Y., Wen, K., Yu, X., Zhang, X.
3.01
X-RAY DIFFRACTION
0.302
0.260
false
false
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cp7/abangle/5cp7.abangle
sabdab_dataset/5cp7/annotation/5cp7_F_VH.ann
sabdab_dataset/5cp7/annotation/5cp7_G_VL.ann
sabdab_dataset/5cp7/imgt/5cp7_F_H.ann
sabdab_dataset/5cp7/imgt/5cp7_G_L.ann
sabdab_dataset/5cp7/sequence/5cp7_raw.pdb
sabdab_dataset/5cp7/sequence/5cp7_F_VH.fa
sabdab_dataset/5cp7/sequence/5cp7_G_VL.fa
sabdab_dataset/5cp7/structure/5cp7.pdb
sabdab_dataset/5cp7/structure/chothia/5cp7.pdb
false
false
validation
5cp7
H
A
0
null
null
null
null
IMMUNE SYSTEM
07/21/15
Crystal Structure of an Antigen-Binding Fragment of Monoclonal Antibody against Sulfonamides
MUS MUSCULUS
mus musculus
mus musculus
null
Wang, Z., Shen, J., Li, C., Li, Y., Wen, K., Yu, X., Zhang, X.
3.01
X-RAY DIFFRACTION
0.302
0.260
false
false
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cp7/abangle/5cp7.abangle
sabdab_dataset/5cp7/annotation/5cp7_H_VH.ann
sabdab_dataset/5cp7/annotation/5cp7_A_VL.ann
sabdab_dataset/5cp7/imgt/5cp7_H_H.ann
sabdab_dataset/5cp7/imgt/5cp7_A_L.ann
sabdab_dataset/5cp7/sequence/5cp7_raw.pdb
sabdab_dataset/5cp7/sequence/5cp7_H_VH.fa
sabdab_dataset/5cp7/sequence/5cp7_A_VL.fa
sabdab_dataset/5cp7/structure/5cp7.pdb
sabdab_dataset/5cp7/structure/chothia/5cp7.pdb
false
false
train
5csz
A
B
0
E
peptide
null
amyloid beta a4 protein
IMMUNE SYSTEM
07/23/15
CRYSTAL STRUCTURE OF GANTENERUMAB FAB FRAGMENT IN COMPLEX WITH ABETA 1-11
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens
Benz, J., Burger, D., Loetscher, H.R., Bohrmann, B.
1.8
X-RAY DIFFRACTION
0.230
0.196
false
true
IGHV3
IGKV3
Kappa
0
-10.599564
Unknown
null
TBD
sabdab_dataset/5csz/abangle/5csz.abangle
sabdab_dataset/5csz/annotation/5csz_A_VH.ann
sabdab_dataset/5csz/annotation/5csz_B_VL.ann
sabdab_dataset/5csz/imgt/5csz_A_H.ann
sabdab_dataset/5csz/imgt/5csz_B_L.ann
sabdab_dataset/5csz/sequence/5csz_raw.pdb
sabdab_dataset/5csz/sequence/5csz_A_VH.fa
sabdab_dataset/5csz/sequence/5csz_B_VL.fa
sabdab_dataset/5csz/structure/5csz.pdb
sabdab_dataset/5csz/structure/chothia/5csz.pdb
true
false
train
5csz
H
L
0
D
peptide
null
amyloid beta a4 protein
IMMUNE SYSTEM
07/23/15
CRYSTAL STRUCTURE OF GANTENERUMAB FAB FRAGMENT IN COMPLEX WITH ABETA 1-11
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens
Benz, J., Burger, D., Loetscher, H.R., Bohrmann, B.
1.8
X-RAY DIFFRACTION
0.230
0.196
false
true
IGHV3
IGKV3
Kappa
0
-10.599564
Unknown
null
TBD
sabdab_dataset/5csz/abangle/5csz.abangle
sabdab_dataset/5csz/annotation/5csz_H_VH.ann
sabdab_dataset/5csz/annotation/5csz_L_VL.ann
sabdab_dataset/5csz/imgt/5csz_H_H.ann
sabdab_dataset/5csz/imgt/5csz_L_L.ann
sabdab_dataset/5csz/sequence/5csz_raw.pdb
sabdab_dataset/5csz/sequence/5csz_H_VH.fa
sabdab_dataset/5csz/sequence/5csz_L_VL.fa
sabdab_dataset/5csz/structure/5csz.pdb
sabdab_dataset/5csz/structure/chothia/5csz.pdb
true
false
train
5cus
H
L
0
A
protein
null
receptor tyrosine-protein kinase erbb-3
TRANSFERASE
07/25/15
Crystal Structure of sErbB3-Fab3379 Complex
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Lee, S., Schlessinger, J.
3.2
X-RAY DIFFRACTION
0.278
0.252
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5cus/abangle/5cus.abangle
sabdab_dataset/5cus/annotation/5cus_H_VH.ann
sabdab_dataset/5cus/annotation/5cus_L_VL.ann
sabdab_dataset/5cus/imgt/5cus_H_H.ann
sabdab_dataset/5cus/imgt/5cus_L_L.ann
sabdab_dataset/5cus/sequence/5cus_raw.pdb
sabdab_dataset/5cus/sequence/5cus_H_VH.fa
sabdab_dataset/5cus/sequence/5cus_L_VL.fa
sabdab_dataset/5cus/structure/5cus.pdb
sabdab_dataset/5cus/structure/chothia/5cus.pdb
true
false
train
5cus
I
M
0
B
protein
null
receptor tyrosine-protein kinase erbb-3
TRANSFERASE
07/25/15
Crystal Structure of sErbB3-Fab3379 Complex
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Lee, S., Schlessinger, J.
3.2
X-RAY DIFFRACTION
0.278
0.252
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5cus/abangle/5cus.abangle
sabdab_dataset/5cus/annotation/5cus_I_VH.ann
sabdab_dataset/5cus/annotation/5cus_M_VL.ann
sabdab_dataset/5cus/imgt/5cus_I_H.ann
sabdab_dataset/5cus/imgt/5cus_M_L.ann
sabdab_dataset/5cus/sequence/5cus_raw.pdb
sabdab_dataset/5cus/sequence/5cus_I_VH.fa
sabdab_dataset/5cus/sequence/5cus_M_VL.fa
sabdab_dataset/5cus/structure/5cus.pdb
sabdab_dataset/5cus/structure/chothia/5cus.pdb
true
false
train
5cus
J
N
0
C
protein
null
receptor tyrosine-protein kinase erbb-3
TRANSFERASE
07/25/15
Crystal Structure of sErbB3-Fab3379 Complex
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Lee, S., Schlessinger, J.
3.2
X-RAY DIFFRACTION
0.278
0.252
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5cus/abangle/5cus.abangle
sabdab_dataset/5cus/annotation/5cus_J_VH.ann
sabdab_dataset/5cus/annotation/5cus_N_VL.ann
sabdab_dataset/5cus/imgt/5cus_J_H.ann
sabdab_dataset/5cus/imgt/5cus_N_L.ann
sabdab_dataset/5cus/sequence/5cus_raw.pdb
sabdab_dataset/5cus/sequence/5cus_J_VH.fa
sabdab_dataset/5cus/sequence/5cus_N_VL.fa
sabdab_dataset/5cus/structure/5cus.pdb
sabdab_dataset/5cus/structure/chothia/5cus.pdb
true
false
train
5cus
K
O
0
D
protein
null
receptor tyrosine-protein kinase erbb-3
TRANSFERASE
07/25/15
Crystal Structure of sErbB3-Fab3379 Complex
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Lee, S., Schlessinger, J.
3.2
X-RAY DIFFRACTION
0.278
0.252
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5cus/abangle/5cus.abangle
sabdab_dataset/5cus/annotation/5cus_K_VH.ann
sabdab_dataset/5cus/annotation/5cus_O_VL.ann
sabdab_dataset/5cus/imgt/5cus_K_H.ann
sabdab_dataset/5cus/imgt/5cus_O_L.ann
sabdab_dataset/5cus/sequence/5cus_raw.pdb
sabdab_dataset/5cus/sequence/5cus_K_VH.fa
sabdab_dataset/5cus/sequence/5cus_O_VL.fa
sabdab_dataset/5cus/structure/5cus.pdb
sabdab_dataset/5cus/structure/chothia/5cus.pdb
true
false
train
5cws
B
A
0
E | C | D | F
protein | protein | protein | peptide
NA | NA | NA | NA
nucleoporin nup57 | nucleoporin nsp1 | nucleoporin nup49 | nucleoporin nic96
PROTEIN TRANSPORT
07/28/15
Crystal structure of the intact Chaetomium thermophilum Nsp1-Nup49-Nup57 channel nucleoporin heterotrimer bound to its Nic96 nuclear pore complex attachment site
HOMO SAPIENS; CHAETOMIUM THERMOPHILUM (STRAIN DSM 1495 / CBS 144.50 / IMI 039719); CHAETOMIUM THERMOPHILUM
homo sapiens
homo sapiens
chaetomium thermophilum (strain dsm 1495 / cbs144.50 / imi 039719) | chaetomium thermophilum (strain dsm 1495 / cbs144.50 / imi 039719) | chaetomium thermophilum | chaetomium thermophilum (strain dsm 1495 / cbs144.50 / imi 039719)
Bley, C.J., Petrovic, S., Paduch, M., Lu, V., Kossiakoff, A.A., Hoelz, A.
3.77
X-RAY DIFFRACTION
0.265
0.229
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5cws/abangle/5cws.abangle
sabdab_dataset/5cws/annotation/5cws_B_VH.ann
sabdab_dataset/5cws/annotation/5cws_A_VL.ann
sabdab_dataset/5cws/imgt/5cws_B_H.ann
sabdab_dataset/5cws/imgt/5cws_A_L.ann
sabdab_dataset/5cws/sequence/5cws_raw.pdb
sabdab_dataset/5cws/sequence/5cws_B_VH.fa
sabdab_dataset/5cws/sequence/5cws_A_VL.fa
sabdab_dataset/5cws/structure/5cws.pdb
sabdab_dataset/5cws/structure/chothia/5cws.pdb
false
false
validation