pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
365 values
r_factor
stringclasses
358 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
abangle
stringlengths
40
40
annotation_H
stringlengths
44
44
annotation_L
stringlengths
44
44
imgt_H
stringlengths
37
37
imgt_L
stringlengths
37
37
sequence_raw
stringlengths
41
41
sequence_H
stringlengths
41
41
sequence_L
stringlengths
41
41
structure
stringlengths
38
38
structure_chothia
stringlengths
46
46
in_nr_set
bool
2 classes
curated_quality_dataset
bool
2 classes
split
stringclasses
3 values
5i5k
H
L
0
B
protein
null
complement c5
IMMUNE SYSTEM
02/15/16
Structure of complement C5 in complex with eculizumab
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Schatz-Jakobsen, J.A., Andersen, G.R.
4.2
X-RAY DIFFRACTION
0.244
0.205
false
true
IGHV1
IGKV1
Kappa
0
-14.671746
SPR
null
TBD
sabdab_dataset/5i5k/abangle/5i5k.abangle
sabdab_dataset/5i5k/annotation/5i5k_H_VH.ann
sabdab_dataset/5i5k/annotation/5i5k_L_VL.ann
sabdab_dataset/5i5k/imgt/5i5k_H_H.ann
sabdab_dataset/5i5k/imgt/5i5k_L_L.ann
sabdab_dataset/5i5k/sequence/5i5k_raw.pdb
sabdab_dataset/5i5k/sequence/5i5k_H_VH.fa
sabdab_dataset/5i5k/sequence/5i5k_L_VL.fa
sabdab_dataset/5i5k/structure/5i5k.pdb
sabdab_dataset/5i5k/structure/chothia/5i5k.pdb
true
false
train
5i5k
X
Y
0
A
protein
null
complement c5
IMMUNE SYSTEM
02/15/16
Structure of complement C5 in complex with eculizumab
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Schatz-Jakobsen, J.A., Andersen, G.R.
4.2
X-RAY DIFFRACTION
0.244
0.205
false
true
IGHV1
IGKV1
Kappa
0
-14.671746
SPR
null
TBD
sabdab_dataset/5i5k/abangle/5i5k.abangle
sabdab_dataset/5i5k/annotation/5i5k_X_VH.ann
sabdab_dataset/5i5k/annotation/5i5k_Y_VL.ann
sabdab_dataset/5i5k/imgt/5i5k_X_H.ann
sabdab_dataset/5i5k/imgt/5i5k_Y_L.ann
sabdab_dataset/5i5k/sequence/5i5k_raw.pdb
sabdab_dataset/5i5k/sequence/5i5k_X_VH.fa
sabdab_dataset/5i5k/sequence/5i5k_Y_VL.fa
sabdab_dataset/5i5k/structure/5i5k.pdb
sabdab_dataset/5i5k/structure/chothia/5i5k.pdb
true
false
train
5i66
A
B
0
null
null
null
null
IMMUNE SYSTEM
02/16/16
X-ray structure of the Fab fragment of 8B6, a murine monoclonal antibody specific for the human serotonin transporter
MUS MUSCULUS
mus musculus
mus musculus
null
Coleman, J.A., Green, E.M., Gouaux, E.
1.624
X-RAY DIFFRACTION
0.198
0.178
false
true
IGHV1
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/5i66/abangle/5i66.abangle
sabdab_dataset/5i66/annotation/5i66_A_VH.ann
sabdab_dataset/5i66/annotation/5i66_B_VL.ann
sabdab_dataset/5i66/imgt/5i66_A_H.ann
sabdab_dataset/5i66/imgt/5i66_B_L.ann
sabdab_dataset/5i66/sequence/5i66_raw.pdb
sabdab_dataset/5i66/sequence/5i66_A_VH.fa
sabdab_dataset/5i66/sequence/5i66_B_VL.fa
sabdab_dataset/5i66/structure/5i66.pdb
sabdab_dataset/5i66/structure/chothia/5i66.pdb
false
false
validation
5i6x
B
C
0
A
protein
null
sodium-dependent serotonin transporter
MEMBRANE PROTEIN
02/16/16
X-ray structure of the ts3 human serotonin transporter complexed with paroxetine at the central site
MUS MUSCULUS; HOMO SAPIENS
mus musculus
mus musculus
homo sapiens
Coleman, J.A., Green, E.M., Gouaux, E.
3.14
X-RAY DIFFRACTION
0.270
0.238
false
true
IGHV1
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/5i6x/abangle/5i6x.abangle
sabdab_dataset/5i6x/annotation/5i6x_B_VH.ann
sabdab_dataset/5i6x/annotation/5i6x_C_VL.ann
sabdab_dataset/5i6x/imgt/5i6x_B_H.ann
sabdab_dataset/5i6x/imgt/5i6x_C_L.ann
sabdab_dataset/5i6x/sequence/5i6x_raw.pdb
sabdab_dataset/5i6x/sequence/5i6x_B_VH.fa
sabdab_dataset/5i6x/sequence/5i6x_C_VL.fa
sabdab_dataset/5i6x/structure/5i6x.pdb
sabdab_dataset/5i6x/structure/chothia/5i6x.pdb
false
false
train
5i6z
B
C
0
A
protein
null
sodium-dependent serotonin transporter
MEMBRANE PROTEIN
02/16/16
X-ray structure of the ts2 human serotonin transporter
MUS MUSCULUS; HOMO SAPIENS
mus musculus
mus musculus
homo sapiens
Coleman, J.A., Green, E.M., Gouaux, E.
4.53
X-RAY DIFFRACTION
0.317
0.280
false
true
IGHV1
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/5i6z/abangle/5i6z.abangle
sabdab_dataset/5i6z/annotation/5i6z_B_VH.ann
sabdab_dataset/5i6z/annotation/5i6z_C_VL.ann
sabdab_dataset/5i6z/imgt/5i6z_B_H.ann
sabdab_dataset/5i6z/imgt/5i6z_C_L.ann
sabdab_dataset/5i6z/sequence/5i6z_raw.pdb
sabdab_dataset/5i6z/sequence/5i6z_B_VH.fa
sabdab_dataset/5i6z/sequence/5i6z_C_VL.fa
sabdab_dataset/5i6z/structure/5i6z.pdb
sabdab_dataset/5i6z/structure/chothia/5i6z.pdb
false
false
train
5i71
B
C
0
A
protein
null
sodium-dependent serotonin transporter
MEMBRANE PROTEIN
02/16/16
X-ray structure of the ts3 human serotonin transporter complexed with s-citalopram at the central site
MUS MUSCULUS; HOMO SAPIENS
mus musculus
mus musculus
homo sapiens
Coleman, J.A., Green, E.M., Gouaux, E.
3.15
X-RAY DIFFRACTION
0.276
0.240
false
true
IGHV1
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/5i71/abangle/5i71.abangle
sabdab_dataset/5i71/annotation/5i71_B_VH.ann
sabdab_dataset/5i71/annotation/5i71_C_VL.ann
sabdab_dataset/5i71/imgt/5i71_B_H.ann
sabdab_dataset/5i71/imgt/5i71_C_L.ann
sabdab_dataset/5i71/sequence/5i71_raw.pdb
sabdab_dataset/5i71/sequence/5i71_B_VH.fa
sabdab_dataset/5i71/sequence/5i71_C_VL.fa
sabdab_dataset/5i71/structure/5i71.pdb
sabdab_dataset/5i71/structure/chothia/5i71.pdb
false
false
train
5i73
B
C
0
A
protein
null
sodium-dependent serotonin transporter
MEMBRANE PROTEIN
02/16/16
X-ray structure of the ts3 human serotonin transporter complexed with s-citalopram at the central and allosteric sites
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Coleman, J.A., Green, E.M., Gouaux, E.
3.24
X-RAY DIFFRACTION
0.275
0.233
false
true
IGHV1
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/5i73/abangle/5i73.abangle
sabdab_dataset/5i73/annotation/5i73_B_VH.ann
sabdab_dataset/5i73/annotation/5i73_C_VL.ann
sabdab_dataset/5i73/imgt/5i73_B_H.ann
sabdab_dataset/5i73/imgt/5i73_C_L.ann
sabdab_dataset/5i73/sequence/5i73_raw.pdb
sabdab_dataset/5i73/sequence/5i73_B_VH.fa
sabdab_dataset/5i73/sequence/5i73_C_VL.fa
sabdab_dataset/5i73/structure/5i73.pdb
sabdab_dataset/5i73/structure/chothia/5i73.pdb
false
false
train
5i74
B
C
0
A
protein
null
sodium-dependent serotonin transporter
MEMBRANE PROTEIN
02/16/16
X-ray structure of the ts3 human serotonin transporter complexed with Br-citalopram at the central site
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Coleman, J.A., Green, E.M., Gouaux, E.
3.395
X-RAY DIFFRACTION
0.296
0.249
false
true
IGHV1
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/5i74/abangle/5i74.abangle
sabdab_dataset/5i74/annotation/5i74_B_VH.ann
sabdab_dataset/5i74/annotation/5i74_C_VL.ann
sabdab_dataset/5i74/imgt/5i74_B_H.ann
sabdab_dataset/5i74/imgt/5i74_C_L.ann
sabdab_dataset/5i74/sequence/5i74_raw.pdb
sabdab_dataset/5i74/sequence/5i74_B_VH.fa
sabdab_dataset/5i74/sequence/5i74_C_VL.fa
sabdab_dataset/5i74/structure/5i74.pdb
sabdab_dataset/5i74/structure/chothia/5i74.pdb
false
false
train
5i75
B
C
0
A
protein
null
sodium-dependent serotonin transporter
MEMBRANE PROTEIN
02/16/16
X-ray structure of the ts3 human serotonin transporter complexed with s-citalopram at the central site and Br-citalopram at the allosteric site
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Coleman, J.A., Green, E.M., Gouaux, E.
3.49
X-RAY DIFFRACTION
0.286
0.244
false
true
IGHV1
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/5i75/abangle/5i75.abangle
sabdab_dataset/5i75/annotation/5i75_B_VH.ann
sabdab_dataset/5i75/annotation/5i75_C_VL.ann
sabdab_dataset/5i75/imgt/5i75_B_H.ann
sabdab_dataset/5i75/imgt/5i75_C_L.ann
sabdab_dataset/5i75/sequence/5i75_raw.pdb
sabdab_dataset/5i75/sequence/5i75_B_VH.fa
sabdab_dataset/5i75/sequence/5i75_C_VL.fa
sabdab_dataset/5i75/structure/5i75.pdb
sabdab_dataset/5i75/structure/chothia/5i75.pdb
false
false
train
5i76
B
A
0
null
null
null
null
IMMUNE SYSTEM
02/16/16
Crystal structure of FM318, a recombinant Fab adopted from cetuximab
HOMO SAPIENS/MUS MUSCULUS XENOGRAFT
homo sapiens/mus musculus xenograft
homo sapiens/mus musculus xenograft
null
Sim, D.W., Kim, J.H., Seok, S.H., Seo, M.D., Kim, Y.P., Won, H.S.
1.922
X-RAY DIFFRACTION
0.201
0.166
false
true
IGHV2
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/5i76/abangle/5i76.abangle
sabdab_dataset/5i76/annotation/5i76_B_VH.ann
sabdab_dataset/5i76/annotation/5i76_A_VL.ann
sabdab_dataset/5i76/imgt/5i76_B_H.ann
sabdab_dataset/5i76/imgt/5i76_A_L.ann
sabdab_dataset/5i76/sequence/5i76_raw.pdb
sabdab_dataset/5i76/sequence/5i76_B_VH.fa
sabdab_dataset/5i76/sequence/5i76_A_VL.fa
sabdab_dataset/5i76/structure/5i76.pdb
sabdab_dataset/5i76/structure/chothia/5i76.pdb
false
false
train
5i76
D
C
0
null
null
null
null
IMMUNE SYSTEM
02/16/16
Crystal structure of FM318, a recombinant Fab adopted from cetuximab
HOMO SAPIENS/MUS MUSCULUS XENOGRAFT
homo sapiens/mus musculus xenograft
homo sapiens/mus musculus xenograft
null
Sim, D.W., Kim, J.H., Seok, S.H., Seo, M.D., Kim, Y.P., Won, H.S.
1.922
X-RAY DIFFRACTION
0.201
0.166
false
true
IGHV2
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/5i76/abangle/5i76.abangle
sabdab_dataset/5i76/annotation/5i76_D_VH.ann
sabdab_dataset/5i76/annotation/5i76_C_VL.ann
sabdab_dataset/5i76/imgt/5i76_D_H.ann
sabdab_dataset/5i76/imgt/5i76_C_L.ann
sabdab_dataset/5i76/sequence/5i76_raw.pdb
sabdab_dataset/5i76/sequence/5i76_D_VH.fa
sabdab_dataset/5i76/sequence/5i76_C_VL.fa
sabdab_dataset/5i76/structure/5i76.pdb
sabdab_dataset/5i76/structure/chothia/5i76.pdb
false
false
test
5i8c
A
B
0
C
peptide
null
hiv-1 clade a bg505 fusion peptide (residue 512-520)
IMMUNE SYSTEM
02/18/16
Crystal Structure of HIV-1 Clade A BG505 Fusion Peptide (residue 512-520) in Complex with Broadly Neutralizing Antibody VRC34.01 Fab
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Xu, K., Zhou, T., Liu, K., Kwong, P.D.
1.54
X-RAY DIFFRACTION
0.182
0.160
false
true
IGHV1
IGKV1
Kappa
0
-10.371065
Unknown
null
TBD
sabdab_dataset/5i8c/abangle/5i8c.abangle
sabdab_dataset/5i8c/annotation/5i8c_A_VH.ann
sabdab_dataset/5i8c/annotation/5i8c_B_VL.ann
sabdab_dataset/5i8c/imgt/5i8c_A_H.ann
sabdab_dataset/5i8c/imgt/5i8c_B_L.ann
sabdab_dataset/5i8c/sequence/5i8c_raw.pdb
sabdab_dataset/5i8c/sequence/5i8c_A_VH.fa
sabdab_dataset/5i8c/sequence/5i8c_B_VL.fa
sabdab_dataset/5i8c/structure/5i8c.pdb
sabdab_dataset/5i8c/structure/chothia/5i8c.pdb
false
false
train
5i8e
A
B
0
null
null
null
null
IMMUNE SYSTEM
02/18/16
Crystal Structure of Broadly Neutralizing HIV-1 Fusion Peptide-Targeting Antibody VRC34.01 Fab
HOMO SAPIENS
homo sapiens
homo sapiens
null
Xu, K., Zhou, T., Liu, K., Kwong, P.D.
2.655
X-RAY DIFFRACTION
0.248
0.186
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5i8e/abangle/5i8e.abangle
sabdab_dataset/5i8e/annotation/5i8e_A_VH.ann
sabdab_dataset/5i8e/annotation/5i8e_B_VL.ann
sabdab_dataset/5i8e/imgt/5i8e_A_H.ann
sabdab_dataset/5i8e/imgt/5i8e_B_L.ann
sabdab_dataset/5i8e/sequence/5i8e_raw.pdb
sabdab_dataset/5i8e/sequence/5i8e_A_VH.fa
sabdab_dataset/5i8e/sequence/5i8e_B_VL.fa
sabdab_dataset/5i8e/structure/5i8e.pdb
sabdab_dataset/5i8e/structure/chothia/5i8e.pdb
false
false
validation
5i8e
C
D
0
null
null
null
null
IMMUNE SYSTEM
02/18/16
Crystal Structure of Broadly Neutralizing HIV-1 Fusion Peptide-Targeting Antibody VRC34.01 Fab
HOMO SAPIENS
homo sapiens
homo sapiens
null
Xu, K., Zhou, T., Liu, K., Kwong, P.D.
2.655
X-RAY DIFFRACTION
0.248
0.186
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5i8e/abangle/5i8e.abangle
sabdab_dataset/5i8e/annotation/5i8e_C_VH.ann
sabdab_dataset/5i8e/annotation/5i8e_D_VL.ann
sabdab_dataset/5i8e/imgt/5i8e_C_H.ann
sabdab_dataset/5i8e/imgt/5i8e_D_L.ann
sabdab_dataset/5i8e/sequence/5i8e_raw.pdb
sabdab_dataset/5i8e/sequence/5i8e_C_VH.fa
sabdab_dataset/5i8e/sequence/5i8e_D_VL.fa
sabdab_dataset/5i8e/structure/5i8e.pdb
sabdab_dataset/5i8e/structure/chothia/5i8e.pdb
false
false
train
5i8h
E
F
0
B
protein
null
bg505 sosip.664 gp41
IMMUNE SYSTEM
02/18/16
Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer in Complex with V3 Loop-targeting Antibody PGT122 Fab and Fusion Peptide-targeting Antibody VRC34.01 Fab
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Xu, K., Zhou, T., Kwong, P.D.
4.301
X-RAY DIFFRACTION
0.309
0.281
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5i8h/abangle/5i8h.abangle
sabdab_dataset/5i8h/annotation/5i8h_E_VH.ann
sabdab_dataset/5i8h/annotation/5i8h_F_VL.ann
sabdab_dataset/5i8h/imgt/5i8h_E_H.ann
sabdab_dataset/5i8h/imgt/5i8h_F_L.ann
sabdab_dataset/5i8h/sequence/5i8h_raw.pdb
sabdab_dataset/5i8h/sequence/5i8h_E_VH.fa
sabdab_dataset/5i8h/sequence/5i8h_F_VL.fa
sabdab_dataset/5i8h/structure/5i8h.pdb
sabdab_dataset/5i8h/structure/chothia/5i8h.pdb
false
false
train
5i8h
G
H
0
D
protein
null
bg505 sosip.664 gp41
IMMUNE SYSTEM
02/18/16
Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer in Complex with V3 Loop-targeting Antibody PGT122 Fab and Fusion Peptide-targeting Antibody VRC34.01 Fab
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Xu, K., Zhou, T., Kwong, P.D.
4.301
X-RAY DIFFRACTION
0.309
0.281
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5i8h/abangle/5i8h.abangle
sabdab_dataset/5i8h/annotation/5i8h_G_VH.ann
sabdab_dataset/5i8h/annotation/5i8h_H_VL.ann
sabdab_dataset/5i8h/imgt/5i8h_G_H.ann
sabdab_dataset/5i8h/imgt/5i8h_H_L.ann
sabdab_dataset/5i8h/sequence/5i8h_raw.pdb
sabdab_dataset/5i8h/sequence/5i8h_G_VH.fa
sabdab_dataset/5i8h/sequence/5i8h_H_VL.fa
sabdab_dataset/5i8h/structure/5i8h.pdb
sabdab_dataset/5i8h/structure/chothia/5i8h.pdb
false
false
train
5i8h
I
J
0
A
protein
null
bg505 sosip.664 gp120
IMMUNE SYSTEM
02/18/16
Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer in Complex with V3 Loop-targeting Antibody PGT122 Fab and Fusion Peptide-targeting Antibody VRC34.01 Fab
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Xu, K., Zhou, T., Kwong, P.D.
4.301
X-RAY DIFFRACTION
0.309
0.281
false
true
IGHV4
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/5i8h/abangle/5i8h.abangle
sabdab_dataset/5i8h/annotation/5i8h_I_VH.ann
sabdab_dataset/5i8h/annotation/5i8h_J_VL.ann
sabdab_dataset/5i8h/imgt/5i8h_I_H.ann
sabdab_dataset/5i8h/imgt/5i8h_J_L.ann
sabdab_dataset/5i8h/sequence/5i8h_raw.pdb
sabdab_dataset/5i8h/sequence/5i8h_I_VH.fa
sabdab_dataset/5i8h/sequence/5i8h_J_VL.fa
sabdab_dataset/5i8h/structure/5i8h.pdb
sabdab_dataset/5i8h/structure/chothia/5i8h.pdb
false
false
test
5i8h
K
L
0
C
protein
null
bg505 sosip.664 gp120
IMMUNE SYSTEM
02/18/16
Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer in Complex with V3 Loop-targeting Antibody PGT122 Fab and Fusion Peptide-targeting Antibody VRC34.01 Fab
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Xu, K., Zhou, T., Kwong, P.D.
4.301
X-RAY DIFFRACTION
0.309
0.281
false
true
IGHV4
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/5i8h/abangle/5i8h.abangle
sabdab_dataset/5i8h/annotation/5i8h_K_VH.ann
sabdab_dataset/5i8h/annotation/5i8h_L_VL.ann
sabdab_dataset/5i8h/imgt/5i8h_K_H.ann
sabdab_dataset/5i8h/imgt/5i8h_L_L.ann
sabdab_dataset/5i8h/sequence/5i8h_raw.pdb
sabdab_dataset/5i8h/sequence/5i8h_K_VH.fa
sabdab_dataset/5i8h/sequence/5i8h_L_VL.fa
sabdab_dataset/5i8h/structure/5i8h.pdb
sabdab_dataset/5i8h/structure/chothia/5i8h.pdb
false
false
test
5i8k
H
L
0
null
null
null
null
IMMUNE SYSTEM
02/19/16
HHH1 Fab fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Andersen, G.R., Spillner, E.
1.771
X-RAY DIFFRACTION
0.212
0.183
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5i8k/abangle/5i8k.abangle
sabdab_dataset/5i8k/annotation/5i8k_H_VH.ann
sabdab_dataset/5i8k/annotation/5i8k_L_VL.ann
sabdab_dataset/5i8k/imgt/5i8k_H_H.ann
sabdab_dataset/5i8k/imgt/5i8k_L_L.ann
sabdab_dataset/5i8k/sequence/5i8k_raw.pdb
sabdab_dataset/5i8k/sequence/5i8k_H_VH.fa
sabdab_dataset/5i8k/sequence/5i8k_L_VL.fa
sabdab_dataset/5i8k/structure/5i8k.pdb
sabdab_dataset/5i8k/structure/chothia/5i8k.pdb
true
false
validation
5i8o
H
L
0
H
carbohydrate
FUC
polysaccharide
IMMUNE SYSTEM
02/19/16
HMM5 Fab in complex with disaccharide
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Andersen, G.R., Tjerrild, L.M., Spillner, E.
1.8
X-RAY DIFFRACTION
0.205
0.164
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5i8o/abangle/5i8o.abangle
sabdab_dataset/5i8o/annotation/5i8o_H_VH.ann
sabdab_dataset/5i8o/annotation/5i8o_L_VL.ann
sabdab_dataset/5i8o/imgt/5i8o_H_H.ann
sabdab_dataset/5i8o/imgt/5i8o_L_L.ann
sabdab_dataset/5i8o/sequence/5i8o_raw.pdb
sabdab_dataset/5i8o/sequence/5i8o_H_VH.fa
sabdab_dataset/5i8o/sequence/5i8o_L_VL.fa
sabdab_dataset/5i8o/structure/5i8o.pdb
sabdab_dataset/5i8o/structure/chothia/5i8o.pdb
true
false
train
5i9q
B
C
0
A
protein
null
426c.tm4dv1-3 p120
IMMUNE SYSTEM
02/20/16
Crystal structure of 3BNC55 Fab in complex with 426c.TM4deltaV1-3 gp120
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Scharf, L., Chen, C., Bjorkman, P.J.
3.0
X-RAY DIFFRACTION
0.270
0.251
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5i9q/abangle/5i9q.abangle
sabdab_dataset/5i9q/annotation/5i9q_B_VH.ann
sabdab_dataset/5i9q/annotation/5i9q_C_VL.ann
sabdab_dataset/5i9q/imgt/5i9q_B_H.ann
sabdab_dataset/5i9q/imgt/5i9q_C_L.ann
sabdab_dataset/5i9q/sequence/5i9q_raw.pdb
sabdab_dataset/5i9q/sequence/5i9q_B_VH.fa
sabdab_dataset/5i9q/sequence/5i9q_C_VL.fa
sabdab_dataset/5i9q/structure/5i9q.pdb
sabdab_dataset/5i9q/structure/chothia/5i9q.pdb
true
false
train
5i9q
H
L
0
G
protein
null
426c.tm4dv1-3 p120
IMMUNE SYSTEM
02/20/16
Crystal structure of 3BNC55 Fab in complex with 426c.TM4deltaV1-3 gp120
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Scharf, L., Chen, C., Bjorkman, P.J.
3.0
X-RAY DIFFRACTION
0.270
0.251
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5i9q/abangle/5i9q.abangle
sabdab_dataset/5i9q/annotation/5i9q_H_VH.ann
sabdab_dataset/5i9q/annotation/5i9q_L_VL.ann
sabdab_dataset/5i9q/imgt/5i9q_H_H.ann
sabdab_dataset/5i9q/imgt/5i9q_L_L.ann
sabdab_dataset/5i9q/sequence/5i9q_raw.pdb
sabdab_dataset/5i9q/sequence/5i9q_H_VH.fa
sabdab_dataset/5i9q/sequence/5i9q_L_VL.fa
sabdab_dataset/5i9q/structure/5i9q.pdb
sabdab_dataset/5i9q/structure/chothia/5i9q.pdb
true
false
train
5ibl
C
D
0
F
protein
null
hemagglutinin
IMMUNE SYSTEM
02/22/16
Human antibody 6639 in complex with influenza hemagglutinin H1 X-181
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Raymond, D.D., Harrison, S.C.
3.39
X-RAY DIFFRACTION
0.257
0.214
false
true
IGHV5
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/5ibl/abangle/5ibl.abangle
sabdab_dataset/5ibl/annotation/5ibl_C_VH.ann
sabdab_dataset/5ibl/annotation/5ibl_D_VL.ann
sabdab_dataset/5ibl/imgt/5ibl_C_H.ann
sabdab_dataset/5ibl/imgt/5ibl_D_L.ann
sabdab_dataset/5ibl/sequence/5ibl_raw.pdb
sabdab_dataset/5ibl/sequence/5ibl_C_VH.fa
sabdab_dataset/5ibl/sequence/5ibl_D_VL.fa
sabdab_dataset/5ibl/structure/5ibl.pdb
sabdab_dataset/5ibl/structure/chothia/5ibl.pdb
true
false
train
5ibl
H
L
0
B | E
protein | protein
NA | NA
hemagglutinin | hemagglutinin
IMMUNE SYSTEM
02/22/16
Human antibody 6639 in complex with influenza hemagglutinin H1 X-181
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus | influenza a virus
Raymond, D.D., Harrison, S.C.
3.39
X-RAY DIFFRACTION
0.257
0.214
false
true
IGHV5
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/5ibl/abangle/5ibl.abangle
sabdab_dataset/5ibl/annotation/5ibl_H_VH.ann
sabdab_dataset/5ibl/annotation/5ibl_L_VL.ann
sabdab_dataset/5ibl/imgt/5ibl_H_H.ann
sabdab_dataset/5ibl/imgt/5ibl_L_L.ann
sabdab_dataset/5ibl/sequence/5ibl_raw.pdb
sabdab_dataset/5ibl/sequence/5ibl_H_VH.fa
sabdab_dataset/5ibl/sequence/5ibl_L_VL.fa
sabdab_dataset/5ibl/structure/5ibl.pdb
sabdab_dataset/5ibl/structure/chothia/5ibl.pdb
true
false
train
5ibt
H
L
0
null
null
null
null
IMMUNE SYSTEM
02/22/16
UCA Fab (unbound) from 6515 Lineage
HOMO SAPIENS
homo sapiens
homo sapiens
null
Raymond, D.D., Harrison, S.C.
2.4
X-RAY DIFFRACTION
0.278
0.205
false
true
IGHV5
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/5ibt/abangle/5ibt.abangle
sabdab_dataset/5ibt/annotation/5ibt_H_VH.ann
sabdab_dataset/5ibt/annotation/5ibt_L_VL.ann
sabdab_dataset/5ibt/imgt/5ibt_H_H.ann
sabdab_dataset/5ibt/imgt/5ibt_L_L.ann
sabdab_dataset/5ibt/sequence/5ibt_raw.pdb
sabdab_dataset/5ibt/sequence/5ibt_H_VH.fa
sabdab_dataset/5ibt/sequence/5ibt_L_VL.fa
sabdab_dataset/5ibt/structure/5ibt.pdb
sabdab_dataset/5ibt/structure/chothia/5ibt.pdb
false
false
validation
5ibu
G
B
0
null
null
null
null
IMMUNE SYSTEM
02/22/16
6652 Fab (unbound)
HOMO SAPIENS
homo sapiens
homo sapiens
null
Raymond, D.D., Harrison, S.C.
1.71
X-RAY DIFFRACTION
0.245
0.210
false
true
IGHV5
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/5ibu/abangle/5ibu.abangle
sabdab_dataset/5ibu/annotation/5ibu_G_VH.ann
sabdab_dataset/5ibu/annotation/5ibu_B_VL.ann
sabdab_dataset/5ibu/imgt/5ibu_G_H.ann
sabdab_dataset/5ibu/imgt/5ibu_B_L.ann
sabdab_dataset/5ibu/sequence/5ibu_raw.pdb
sabdab_dataset/5ibu/sequence/5ibu_G_VH.fa
sabdab_dataset/5ibu/sequence/5ibu_B_VL.fa
sabdab_dataset/5ibu/structure/5ibu.pdb
sabdab_dataset/5ibu/structure/chothia/5ibu.pdb
true
false
train
5ibu
H
L
0
null
null
null
null
IMMUNE SYSTEM
02/22/16
6652 Fab (unbound)
HOMO SAPIENS
homo sapiens
homo sapiens
null
Raymond, D.D., Harrison, S.C.
1.71
X-RAY DIFFRACTION
0.245
0.210
false
true
IGHV5
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/5ibu/abangle/5ibu.abangle
sabdab_dataset/5ibu/annotation/5ibu_H_VH.ann
sabdab_dataset/5ibu/annotation/5ibu_L_VL.ann
sabdab_dataset/5ibu/imgt/5ibu_H_H.ann
sabdab_dataset/5ibu/imgt/5ibu_L_L.ann
sabdab_dataset/5ibu/sequence/5ibu_raw.pdb
sabdab_dataset/5ibu/sequence/5ibu_H_VH.fa
sabdab_dataset/5ibu/sequence/5ibu_L_VL.fa
sabdab_dataset/5ibu/structure/5ibu.pdb
sabdab_dataset/5ibu/structure/chothia/5ibu.pdb
true
false
train
5icx
B
A
0
null
null
null
null
IMMUNE SYSTEM
02/23/16
Cetuximab Fab in complex with CQFDLSTRRLRCGGSK meditope
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.6
X-RAY DIFFRACTION
0.222
0.177
false
true
IGHV2
IGKV5
Kappa
0
-9.493239
Unknown
null
TBD
sabdab_dataset/5icx/abangle/5icx.abangle
sabdab_dataset/5icx/annotation/5icx_B_VH.ann
sabdab_dataset/5icx/annotation/5icx_A_VL.ann
sabdab_dataset/5icx/imgt/5icx_B_H.ann
sabdab_dataset/5icx/imgt/5icx_A_L.ann
sabdab_dataset/5icx/sequence/5icx_raw.pdb
sabdab_dataset/5icx/sequence/5icx_B_VH.fa
sabdab_dataset/5icx/sequence/5icx_A_VL.fa
sabdab_dataset/5icx/structure/5icx.pdb
sabdab_dataset/5icx/structure/chothia/5icx.pdb
false
false
train
5icx
D
C
0
null
null
null
null
IMMUNE SYSTEM
02/23/16
Cetuximab Fab in complex with CQFDLSTRRLRCGGSK meditope
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.6
X-RAY DIFFRACTION
0.222
0.177
false
true
IGHV2
IGKV5
Kappa
0
-9.493239
Unknown
null
TBD
sabdab_dataset/5icx/abangle/5icx.abangle
sabdab_dataset/5icx/annotation/5icx_D_VH.ann
sabdab_dataset/5icx/annotation/5icx_C_VL.ann
sabdab_dataset/5icx/imgt/5icx_D_H.ann
sabdab_dataset/5icx/imgt/5icx_C_L.ann
sabdab_dataset/5icx/sequence/5icx_raw.pdb
sabdab_dataset/5icx/sequence/5icx_D_VH.fa
sabdab_dataset/5icx/sequence/5icx_C_VL.fa
sabdab_dataset/5icx/structure/5icx.pdb
sabdab_dataset/5icx/structure/chothia/5icx.pdb
false
false
train
5icy
B
A
0
null
null
null
null
IMMUNE SYSTEM
02/23/16
Cetuximab Fab in complex with linear meditope
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.5
X-RAY DIFFRACTION
0.206
0.160
false
true
IGHV2
IGKV5
Kappa
0.000009
-6.903731
Unknown
null
TBD
sabdab_dataset/5icy/abangle/5icy.abangle
sabdab_dataset/5icy/annotation/5icy_B_VH.ann
sabdab_dataset/5icy/annotation/5icy_A_VL.ann
sabdab_dataset/5icy/imgt/5icy_B_H.ann
sabdab_dataset/5icy/imgt/5icy_A_L.ann
sabdab_dataset/5icy/sequence/5icy_raw.pdb
sabdab_dataset/5icy/sequence/5icy_B_VH.fa
sabdab_dataset/5icy/sequence/5icy_A_VL.fa
sabdab_dataset/5icy/structure/5icy.pdb
sabdab_dataset/5icy/structure/chothia/5icy.pdb
false
false
test
5icy
D
C
0
null
null
null
null
IMMUNE SYSTEM
02/23/16
Cetuximab Fab in complex with linear meditope
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.5
X-RAY DIFFRACTION
0.206
0.160
false
true
IGHV2
IGKV5
Kappa
0.000009
-6.903731
Unknown
null
TBD
sabdab_dataset/5icy/abangle/5icy.abangle
sabdab_dataset/5icy/annotation/5icy_D_VH.ann
sabdab_dataset/5icy/annotation/5icy_C_VL.ann
sabdab_dataset/5icy/imgt/5icy_D_H.ann
sabdab_dataset/5icy/imgt/5icy_C_L.ann
sabdab_dataset/5icy/sequence/5icy_raw.pdb
sabdab_dataset/5icy/sequence/5icy_D_VH.fa
sabdab_dataset/5icy/sequence/5icy_C_VL.fa
sabdab_dataset/5icy/structure/5icy.pdb
sabdab_dataset/5icy/structure/chothia/5icy.pdb
false
false
train
5icz
B
A
0
null
null
null
null
IMMUNE SYSTEM
02/23/16
Cetuximab Fab in complex with GQFDLSTRRLKG peptide
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.55
X-RAY DIFFRACTION
0.221
0.171
false
true
IGHV2
IGKV5
Kappa
0.000005
-7.231899
Unknown
null
TBD
sabdab_dataset/5icz/abangle/5icz.abangle
sabdab_dataset/5icz/annotation/5icz_B_VH.ann
sabdab_dataset/5icz/annotation/5icz_A_VL.ann
sabdab_dataset/5icz/imgt/5icz_B_H.ann
sabdab_dataset/5icz/imgt/5icz_A_L.ann
sabdab_dataset/5icz/sequence/5icz_raw.pdb
sabdab_dataset/5icz/sequence/5icz_B_VH.fa
sabdab_dataset/5icz/sequence/5icz_A_VL.fa
sabdab_dataset/5icz/structure/5icz.pdb
sabdab_dataset/5icz/structure/chothia/5icz.pdb
false
false
train
5icz
D
C
0
null
null
null
null
IMMUNE SYSTEM
02/23/16
Cetuximab Fab in complex with GQFDLSTRRLKG peptide
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.55
X-RAY DIFFRACTION
0.221
0.171
false
true
IGHV2
IGKV5
Kappa
0.000005
-7.231899
Unknown
null
TBD
sabdab_dataset/5icz/abangle/5icz.abangle
sabdab_dataset/5icz/annotation/5icz_D_VH.ann
sabdab_dataset/5icz/annotation/5icz_C_VL.ann
sabdab_dataset/5icz/imgt/5icz_D_H.ann
sabdab_dataset/5icz/imgt/5icz_C_L.ann
sabdab_dataset/5icz/sequence/5icz_raw.pdb
sabdab_dataset/5icz/sequence/5icz_D_VH.fa
sabdab_dataset/5icz/sequence/5icz_C_VL.fa
sabdab_dataset/5icz/structure/5icz.pdb
sabdab_dataset/5icz/structure/chothia/5icz.pdb
false
false
train
5id0
B
A
0
null
null
null
null
IMMUNE SYSTEM
02/23/16
Cetuximab Fab in complex with aminoheptanoic acid-linked meditope
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.48
X-RAY DIFFRACTION
0.208
0.160
false
true
IGHV2
IGKV5
Kappa
0.000002
-7.871076
Unknown
null
TBD
sabdab_dataset/5id0/abangle/5id0.abangle
sabdab_dataset/5id0/annotation/5id0_B_VH.ann
sabdab_dataset/5id0/annotation/5id0_A_VL.ann
sabdab_dataset/5id0/imgt/5id0_B_H.ann
sabdab_dataset/5id0/imgt/5id0_A_L.ann
sabdab_dataset/5id0/sequence/5id0_raw.pdb
sabdab_dataset/5id0/sequence/5id0_B_VH.fa
sabdab_dataset/5id0/sequence/5id0_A_VL.fa
sabdab_dataset/5id0/structure/5id0.pdb
sabdab_dataset/5id0/structure/chothia/5id0.pdb
false
false
train
5id0
D
C
0
null
null
null
null
IMMUNE SYSTEM
02/23/16
Cetuximab Fab in complex with aminoheptanoic acid-linked meditope
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.48
X-RAY DIFFRACTION
0.208
0.160
false
true
IGHV2
IGKV5
Kappa
0.000002
-7.871076
Unknown
null
TBD
sabdab_dataset/5id0/abangle/5id0.abangle
sabdab_dataset/5id0/annotation/5id0_D_VH.ann
sabdab_dataset/5id0/annotation/5id0_C_VL.ann
sabdab_dataset/5id0/imgt/5id0_D_H.ann
sabdab_dataset/5id0/imgt/5id0_C_L.ann
sabdab_dataset/5id0/sequence/5id0_raw.pdb
sabdab_dataset/5id0/sequence/5id0_D_VH.fa
sabdab_dataset/5id0/sequence/5id0_C_VL.fa
sabdab_dataset/5id0/structure/5id0.pdb
sabdab_dataset/5id0/structure/chothia/5id0.pdb
false
false
train
5id1
B
A
0
null
null
null
null
IMMUNE SYSTEM
02/23/16
Cetuximab Fab in complex with MPT-Cys meditope
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.49
X-RAY DIFFRACTION
0.221
0.173
false
true
IGHV2
IGKV5
Kappa
0.000001
-8.528998
Unknown
null
TBD
sabdab_dataset/5id1/abangle/5id1.abangle
sabdab_dataset/5id1/annotation/5id1_B_VH.ann
sabdab_dataset/5id1/annotation/5id1_A_VL.ann
sabdab_dataset/5id1/imgt/5id1_B_H.ann
sabdab_dataset/5id1/imgt/5id1_A_L.ann
sabdab_dataset/5id1/sequence/5id1_raw.pdb
sabdab_dataset/5id1/sequence/5id1_B_VH.fa
sabdab_dataset/5id1/sequence/5id1_A_VL.fa
sabdab_dataset/5id1/structure/5id1.pdb
sabdab_dataset/5id1/structure/chothia/5id1.pdb
false
false
train
5id1
D
C
0
null
null
null
null
IMMUNE SYSTEM
02/23/16
Cetuximab Fab in complex with MPT-Cys meditope
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.49
X-RAY DIFFRACTION
0.221
0.173
false
true
IGHV2
IGKV5
Kappa
0.000001
-8.528998
Unknown
null
TBD
sabdab_dataset/5id1/abangle/5id1.abangle
sabdab_dataset/5id1/annotation/5id1_D_VH.ann
sabdab_dataset/5id1/annotation/5id1_C_VL.ann
sabdab_dataset/5id1/imgt/5id1_D_H.ann
sabdab_dataset/5id1/imgt/5id1_C_L.ann
sabdab_dataset/5id1/sequence/5id1_raw.pdb
sabdab_dataset/5id1/sequence/5id1_D_VH.fa
sabdab_dataset/5id1/sequence/5id1_C_VL.fa
sabdab_dataset/5id1/structure/5id1.pdb
sabdab_dataset/5id1/structure/chothia/5id1.pdb
false
false
train
5ies
H
L
0
C
protein
null
germline-targeting hiv-1 gp120 engineered outer domain eod-gt8
IMMUNE SYSTEM/ VIRAL PROTEIN
02/25/16
Crystal structure of VRC01c-HuGL2 Fab from an HIV-1 naive donor in complex with with a germline-targeting gp120 engineered outer domain eOD-GT8 at 2.16 A
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Sarkar, A., Wilson, I.A.
2.16
X-RAY DIFFRACTION
0.214
0.189
false
true
IGHV1
IGKV4
Kappa
0
-8.777754
SPR
null
TBD
sabdab_dataset/5ies/abangle/5ies.abangle
sabdab_dataset/5ies/annotation/5ies_H_VH.ann
sabdab_dataset/5ies/annotation/5ies_L_VL.ann
sabdab_dataset/5ies/imgt/5ies_H_H.ann
sabdab_dataset/5ies/imgt/5ies_L_L.ann
sabdab_dataset/5ies/sequence/5ies_raw.pdb
sabdab_dataset/5ies/sequence/5ies_H_VH.fa
sabdab_dataset/5ies/sequence/5ies_L_VL.fa
sabdab_dataset/5ies/structure/5ies.pdb
sabdab_dataset/5ies/structure/chothia/5ies.pdb
false
false
train
5if0
A
B
0
I
protein
null
germline-targeting hiv-1 gp120 engineered outer domain eod-gt8
IMMUNE SYSTEM/VIRAL PROTEIN
02/25/16
Crystal structure of VRC01c-HuGL2 Fab from an HIV-1 naive donor in complex with with a germline-targeting gp120 engineered outer domain eOD-GT8 at 2.44 A
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Sarkar, A., Wilson, I.A.
2.44
X-RAY DIFFRACTION
0.232
0.191
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/5if0/abangle/5if0.abangle
sabdab_dataset/5if0/annotation/5if0_A_VH.ann
sabdab_dataset/5if0/annotation/5if0_B_VL.ann
sabdab_dataset/5if0/imgt/5if0_A_H.ann
sabdab_dataset/5if0/imgt/5if0_B_L.ann
sabdab_dataset/5if0/sequence/5if0_raw.pdb
sabdab_dataset/5if0/sequence/5if0_A_VH.fa
sabdab_dataset/5if0/sequence/5if0_B_VL.fa
sabdab_dataset/5if0/structure/5if0.pdb
sabdab_dataset/5if0/structure/chothia/5if0.pdb
false
false
train
5if0
H
L
0
G
protein
null
germline-targeting hiv-1 gp120 engineered outer domain eod-gt8
IMMUNE SYSTEM/VIRAL PROTEIN
02/25/16
Crystal structure of VRC01c-HuGL2 Fab from an HIV-1 naive donor in complex with with a germline-targeting gp120 engineered outer domain eOD-GT8 at 2.44 A
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Sarkar, A., Wilson, I.A.
2.44
X-RAY DIFFRACTION
0.232
0.191
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/5if0/abangle/5if0.abangle
sabdab_dataset/5if0/annotation/5if0_H_VH.ann
sabdab_dataset/5if0/annotation/5if0_L_VL.ann
sabdab_dataset/5if0/imgt/5if0_H_H.ann
sabdab_dataset/5if0/imgt/5if0_L_L.ann
sabdab_dataset/5if0/sequence/5if0_raw.pdb
sabdab_dataset/5if0/sequence/5if0_H_VH.fa
sabdab_dataset/5if0/sequence/5if0_L_VL.fa
sabdab_dataset/5if0/structure/5if0.pdb
sabdab_dataset/5if0/structure/chothia/5if0.pdb
false
false
train
5ifa
H
L
0
null
null
null
null
IMMUNE SYSTEM
02/25/16
Crystal structure of unbound VRC01c-HuGL2 Fab from an HIV-1 naive donor at 1.82 A
HOMO SAPIENS
homo sapiens
homo sapiens
null
Sarkar, A., Wilson, I.A.
1.821
X-RAY DIFFRACTION
0.240
0.205
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/5ifa/abangle/5ifa.abangle
sabdab_dataset/5ifa/annotation/5ifa_H_VH.ann
sabdab_dataset/5ifa/annotation/5ifa_L_VL.ann
sabdab_dataset/5ifa/imgt/5ifa_H_H.ann
sabdab_dataset/5ifa/imgt/5ifa_L_L.ann
sabdab_dataset/5ifa/sequence/5ifa_raw.pdb
sabdab_dataset/5ifa/sequence/5ifa_H_VH.fa
sabdab_dataset/5ifa/sequence/5ifa_L_VL.fa
sabdab_dataset/5ifa/structure/5ifa.pdb
sabdab_dataset/5ifa/structure/chothia/5ifa.pdb
false
false
train
5ifh
H
L
0
null
null
null
null
IMMUNE SYSTEM
02/26/16
Crystal structure of the BCR Fab fragment from subset #2 case P11475
HOMO SAPIENS
homo sapiens
homo sapiens
null
Minici, C., Degano, M.
2.293
X-RAY DIFFRACTION
0.209
0.180
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/5ifh/abangle/5ifh.abangle
sabdab_dataset/5ifh/annotation/5ifh_H_VH.ann
sabdab_dataset/5ifh/annotation/5ifh_L_VL.ann
sabdab_dataset/5ifh/imgt/5ifh_H_H.ann
sabdab_dataset/5ifh/imgt/5ifh_L_L.ann
sabdab_dataset/5ifh/sequence/5ifh_raw.pdb
sabdab_dataset/5ifh/sequence/5ifh_H_VH.fa
sabdab_dataset/5ifh/sequence/5ifh_L_VL.fa
sabdab_dataset/5ifh/structure/5ifh.pdb
sabdab_dataset/5ifh/structure/chothia/5ifh.pdb
true
false
train
5ifj
A
B
0
C
peptide
null
peptide pro-leu-gln-pro-glu-gln-pro-phe-pro
IMMUNE SYSTEM
02/26/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPEQPFP
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
triticum aestivum
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
2.35
X-RAY DIFFRACTION
0.241
0.205
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ifj/abangle/5ifj.abangle
sabdab_dataset/5ifj/annotation/5ifj_A_VH.ann
sabdab_dataset/5ifj/annotation/5ifj_B_VL.ann
sabdab_dataset/5ifj/imgt/5ifj_A_H.ann
sabdab_dataset/5ifj/imgt/5ifj_B_L.ann
sabdab_dataset/5ifj/sequence/5ifj_raw.pdb
sabdab_dataset/5ifj/sequence/5ifj_A_VH.fa
sabdab_dataset/5ifj/sequence/5ifj_B_VL.fa
sabdab_dataset/5ifj/structure/5ifj.pdb
sabdab_dataset/5ifj/structure/chothia/5ifj.pdb
true
false
train
5ifj
D
E
0
F
peptide
null
peptide pro-leu-gln-pro-glu-gln-pro-phe-pro
IMMUNE SYSTEM
02/26/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPEQPFP
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
triticum aestivum
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
2.35
X-RAY DIFFRACTION
0.241
0.205
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ifj/abangle/5ifj.abangle
sabdab_dataset/5ifj/annotation/5ifj_D_VH.ann
sabdab_dataset/5ifj/annotation/5ifj_E_VL.ann
sabdab_dataset/5ifj/imgt/5ifj_D_H.ann
sabdab_dataset/5ifj/imgt/5ifj_E_L.ann
sabdab_dataset/5ifj/sequence/5ifj_raw.pdb
sabdab_dataset/5ifj/sequence/5ifj_D_VH.fa
sabdab_dataset/5ifj/sequence/5ifj_E_VL.fa
sabdab_dataset/5ifj/structure/5ifj.pdb
sabdab_dataset/5ifj/structure/chothia/5ifj.pdb
true
false
test
5ifj
G
H
0
I
peptide
null
peptide pro-leu-gln-pro-glu-gln-pro-phe-pro
IMMUNE SYSTEM
02/26/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPEQPFP
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
triticum aestivum
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
2.35
X-RAY DIFFRACTION
0.241
0.205
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ifj/abangle/5ifj.abangle
sabdab_dataset/5ifj/annotation/5ifj_G_VH.ann
sabdab_dataset/5ifj/annotation/5ifj_H_VL.ann
sabdab_dataset/5ifj/imgt/5ifj_G_H.ann
sabdab_dataset/5ifj/imgt/5ifj_H_L.ann
sabdab_dataset/5ifj/sequence/5ifj_raw.pdb
sabdab_dataset/5ifj/sequence/5ifj_G_VH.fa
sabdab_dataset/5ifj/sequence/5ifj_H_VL.fa
sabdab_dataset/5ifj/structure/5ifj.pdb
sabdab_dataset/5ifj/structure/chothia/5ifj.pdb
true
false
train
5ifj
J
K
0
L
peptide
null
peptide pro-leu-gln-pro-glu-gln-pro-phe-pro
IMMUNE SYSTEM
02/26/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPEQPFP
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
triticum aestivum
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
2.35
X-RAY DIFFRACTION
0.241
0.205
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ifj/abangle/5ifj.abangle
sabdab_dataset/5ifj/annotation/5ifj_J_VH.ann
sabdab_dataset/5ifj/annotation/5ifj_K_VL.ann
sabdab_dataset/5ifj/imgt/5ifj_J_H.ann
sabdab_dataset/5ifj/imgt/5ifj_K_L.ann
sabdab_dataset/5ifj/sequence/5ifj_raw.pdb
sabdab_dataset/5ifj/sequence/5ifj_J_VH.fa
sabdab_dataset/5ifj/sequence/5ifj_K_VL.fa
sabdab_dataset/5ifj/structure/5ifj.pdb
sabdab_dataset/5ifj/structure/chothia/5ifj.pdb
true
false
validation
5ig7
A
B
0
C
peptide
null
peptide pro-leu-gln-pro-gln-gln-pro-phe-pro
IMMUNE SYSTEM
02/27/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPQQPFP
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
1.97
X-RAY DIFFRACTION
0.236
0.190
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ig7/abangle/5ig7.abangle
sabdab_dataset/5ig7/annotation/5ig7_A_VH.ann
sabdab_dataset/5ig7/annotation/5ig7_B_VL.ann
sabdab_dataset/5ig7/imgt/5ig7_A_H.ann
sabdab_dataset/5ig7/imgt/5ig7_B_L.ann
sabdab_dataset/5ig7/sequence/5ig7_raw.pdb
sabdab_dataset/5ig7/sequence/5ig7_A_VH.fa
sabdab_dataset/5ig7/sequence/5ig7_B_VL.fa
sabdab_dataset/5ig7/structure/5ig7.pdb
sabdab_dataset/5ig7/structure/chothia/5ig7.pdb
false
false
test
5ig7
D
E
0
F
peptide
null
peptide pro-leu-gln-pro-gln-gln-pro-phe-pro
IMMUNE SYSTEM
02/27/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPQQPFP
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
1.97
X-RAY DIFFRACTION
0.236
0.190
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ig7/abangle/5ig7.abangle
sabdab_dataset/5ig7/annotation/5ig7_D_VH.ann
sabdab_dataset/5ig7/annotation/5ig7_E_VL.ann
sabdab_dataset/5ig7/imgt/5ig7_D_H.ann
sabdab_dataset/5ig7/imgt/5ig7_E_L.ann
sabdab_dataset/5ig7/sequence/5ig7_raw.pdb
sabdab_dataset/5ig7/sequence/5ig7_D_VH.fa
sabdab_dataset/5ig7/sequence/5ig7_E_VL.fa
sabdab_dataset/5ig7/structure/5ig7.pdb
sabdab_dataset/5ig7/structure/chothia/5ig7.pdb
false
false
train
5ig7
G
H
0
I
peptide
null
peptide pro-leu-gln-pro-gln-gln-pro-phe-pro
IMMUNE SYSTEM
02/27/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPQQPFP
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
1.97
X-RAY DIFFRACTION
0.236
0.190
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ig7/abangle/5ig7.abangle
sabdab_dataset/5ig7/annotation/5ig7_G_VH.ann
sabdab_dataset/5ig7/annotation/5ig7_H_VL.ann
sabdab_dataset/5ig7/imgt/5ig7_G_H.ann
sabdab_dataset/5ig7/imgt/5ig7_H_L.ann
sabdab_dataset/5ig7/sequence/5ig7_raw.pdb
sabdab_dataset/5ig7/sequence/5ig7_G_VH.fa
sabdab_dataset/5ig7/sequence/5ig7_H_VL.fa
sabdab_dataset/5ig7/structure/5ig7.pdb
sabdab_dataset/5ig7/structure/chothia/5ig7.pdb
false
false
train
5ig7
J
K
0
L
peptide
null
peptide pro-leu-gln-pro-gln-gln-pro-phe-pro
IMMUNE SYSTEM
02/27/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPQQPFP
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
1.97
X-RAY DIFFRACTION
0.236
0.190
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ig7/abangle/5ig7.abangle
sabdab_dataset/5ig7/annotation/5ig7_J_VH.ann
sabdab_dataset/5ig7/annotation/5ig7_K_VL.ann
sabdab_dataset/5ig7/imgt/5ig7_J_H.ann
sabdab_dataset/5ig7/imgt/5ig7_K_L.ann
sabdab_dataset/5ig7/sequence/5ig7_raw.pdb
sabdab_dataset/5ig7/sequence/5ig7_J_VH.fa
sabdab_dataset/5ig7/sequence/5ig7_K_VL.fa
sabdab_dataset/5ig7/structure/5ig7.pdb
sabdab_dataset/5ig7/structure/chothia/5ig7.pdb
false
false
train
5igx
H
L
0
G
protein
null
426c.tm1deltav1-3 gp120
IMMUNE SYSTEM
02/28/16
Crystal structure of NIH45-46 Fab germline precursor in complex with 426c.TM1deltaV1-3 gp120
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Scharf, L., Bjorkman, P.J.
3.39
X-RAY DIFFRACTION
0.286
0.280
false
true
IGHV1
IGKV3
Kappa
0.000001
-8.387551
SPR
null
TBD
sabdab_dataset/5igx/abangle/5igx.abangle
sabdab_dataset/5igx/annotation/5igx_H_VH.ann
sabdab_dataset/5igx/annotation/5igx_L_VL.ann
sabdab_dataset/5igx/imgt/5igx_H_H.ann
sabdab_dataset/5igx/imgt/5igx_L_L.ann
sabdab_dataset/5igx/sequence/5igx_raw.pdb
sabdab_dataset/5igx/sequence/5igx_H_VH.fa
sabdab_dataset/5igx/sequence/5igx_L_VL.fa
sabdab_dataset/5igx/structure/5igx.pdb
sabdab_dataset/5igx/structure/chothia/5igx.pdb
false
false
train
5ihl
B
null
0
A
protein
null
tumor necrosis factor receptor superfamily member 5
IMMUNE SYSTEM/SIGNALING PROTEIN
02/29/16
STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE CD40 IN COMPLEX WITH 3H56-5 DAB
HOMO SAPIENS
homo sapiens
null
homo sapiens
Sheriff, S.
3.3
X-RAY DIFFRACTION
0.298
0.268
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/5ihl/annotation/5ihl_B_VH.ann
null
sabdab_dataset/5ihl/imgt/5ihl_B_H.ann
null
sabdab_dataset/5ihl/sequence/5ihl_raw.pdb
sabdab_dataset/5ihl/sequence/5ihl_B_VH.fa
null
sabdab_dataset/5ihl/structure/5ihl.pdb
sabdab_dataset/5ihl/structure/chothia/5ihl.pdb
false
false
train
5ihl
E
null
0
D
protein
null
tumor necrosis factor receptor superfamily member 5
IMMUNE SYSTEM/SIGNALING PROTEIN
02/29/16
STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE CD40 IN COMPLEX WITH 3H56-5 DAB
HOMO SAPIENS
homo sapiens
null
homo sapiens
Sheriff, S.
3.3
X-RAY DIFFRACTION
0.298
0.268
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/5ihl/annotation/5ihl_E_VH.ann
null
sabdab_dataset/5ihl/imgt/5ihl_E_H.ann
null
sabdab_dataset/5ihl/sequence/5ihl_raw.pdb
sabdab_dataset/5ihl/sequence/5ihl_E_VH.fa
null
sabdab_dataset/5ihl/structure/5ihl.pdb
sabdab_dataset/5ihl/structure/chothia/5ihl.pdb
false
false
test
5ihl
G
null
0
F
protein
null
tumor necrosis factor receptor superfamily member 5
IMMUNE SYSTEM/SIGNALING PROTEIN
02/29/16
STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE CD40 IN COMPLEX WITH 3H56-5 DAB
HOMO SAPIENS
homo sapiens
null
homo sapiens
Sheriff, S.
3.3
X-RAY DIFFRACTION
0.298
0.268
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/5ihl/annotation/5ihl_G_VH.ann
null
sabdab_dataset/5ihl/imgt/5ihl_G_H.ann
null
sabdab_dataset/5ihl/sequence/5ihl_raw.pdb
sabdab_dataset/5ihl/sequence/5ihl_G_VH.fa
null
sabdab_dataset/5ihl/structure/5ihl.pdb
sabdab_dataset/5ihl/structure/chothia/5ihl.pdb
false
false
train
5ihl
I
null
0
H
protein
null
tumor necrosis factor receptor superfamily member 5
IMMUNE SYSTEM/SIGNALING PROTEIN
02/29/16
STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE CD40 IN COMPLEX WITH 3H56-5 DAB
HOMO SAPIENS
homo sapiens
null
homo sapiens
Sheriff, S.
3.3
X-RAY DIFFRACTION
0.298
0.268
false
true
IGHV3
null
null
null
null
null
null
null
null
sabdab_dataset/5ihl/annotation/5ihl_I_VH.ann
null
sabdab_dataset/5ihl/imgt/5ihl_I_H.ann
null
sabdab_dataset/5ihl/sequence/5ihl_raw.pdb
sabdab_dataset/5ihl/sequence/5ihl_I_VH.fa
null
sabdab_dataset/5ihl/structure/5ihl.pdb
sabdab_dataset/5ihl/structure/chothia/5ihl.pdb
false
false
train
5ihu
H
L
0
null
null
null
null
IMMUNE SYSTEM
02/29/16
Crystal structure of bovine Fab B11
BOS TAURUS
bos taurus
bos taurus
null
Stanfield, R., Wilson, I.
2.06
X-RAY DIFFRACTION
0.235
0.194
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5ihu/abangle/5ihu.abangle
sabdab_dataset/5ihu/annotation/5ihu_H_VH.ann
sabdab_dataset/5ihu/annotation/5ihu_L_VL.ann
sabdab_dataset/5ihu/imgt/5ihu_H_H.ann
sabdab_dataset/5ihu/imgt/5ihu_L_L.ann
sabdab_dataset/5ihu/sequence/5ihu_raw.pdb
sabdab_dataset/5ihu/sequence/5ihu_H_VH.fa
sabdab_dataset/5ihu/sequence/5ihu_L_VL.fa
sabdab_dataset/5ihu/structure/5ihu.pdb
sabdab_dataset/5ihu/structure/chothia/5ihu.pdb
false
false
train
5ihz
A
B
0
null
null
null
null
IMMUNE SYSTEM
03/01/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
1.64
X-RAY DIFFRACTION
0.229
0.200
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ihz/abangle/5ihz.abangle
sabdab_dataset/5ihz/annotation/5ihz_A_VH.ann
sabdab_dataset/5ihz/annotation/5ihz_B_VL.ann
sabdab_dataset/5ihz/imgt/5ihz_A_H.ann
sabdab_dataset/5ihz/imgt/5ihz_B_L.ann
sabdab_dataset/5ihz/sequence/5ihz_raw.pdb
sabdab_dataset/5ihz/sequence/5ihz_A_VH.fa
sabdab_dataset/5ihz/sequence/5ihz_B_VL.fa
sabdab_dataset/5ihz/structure/5ihz.pdb
sabdab_dataset/5ihz/structure/chothia/5ihz.pdb
false
false
train
5ihz
C
D
0
null
null
null
null
IMMUNE SYSTEM
03/01/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
1.64
X-RAY DIFFRACTION
0.229
0.200
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ihz/abangle/5ihz.abangle
sabdab_dataset/5ihz/annotation/5ihz_C_VH.ann
sabdab_dataset/5ihz/annotation/5ihz_D_VL.ann
sabdab_dataset/5ihz/imgt/5ihz_C_H.ann
sabdab_dataset/5ihz/imgt/5ihz_D_L.ann
sabdab_dataset/5ihz/sequence/5ihz_raw.pdb
sabdab_dataset/5ihz/sequence/5ihz_C_VH.fa
sabdab_dataset/5ihz/sequence/5ihz_D_VL.fa
sabdab_dataset/5ihz/structure/5ihz.pdb
sabdab_dataset/5ihz/structure/chothia/5ihz.pdb
false
false
train
5ihz
E
F
0
null
null
null
null
IMMUNE SYSTEM
03/01/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
1.64
X-RAY DIFFRACTION
0.229
0.200
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ihz/abangle/5ihz.abangle
sabdab_dataset/5ihz/annotation/5ihz_E_VH.ann
sabdab_dataset/5ihz/annotation/5ihz_F_VL.ann
sabdab_dataset/5ihz/imgt/5ihz_E_H.ann
sabdab_dataset/5ihz/imgt/5ihz_F_L.ann
sabdab_dataset/5ihz/sequence/5ihz_raw.pdb
sabdab_dataset/5ihz/sequence/5ihz_E_VH.fa
sabdab_dataset/5ihz/sequence/5ihz_F_VL.fa
sabdab_dataset/5ihz/structure/5ihz.pdb
sabdab_dataset/5ihz/structure/chothia/5ihz.pdb
false
false
train
5ihz
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/01/16
Crystal structure of anti-gliadin 1002-1E01 Fab fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
1.64
X-RAY DIFFRACTION
0.229
0.200
false
true
IGHV3
IGLV4
Lambda
null
null
null
null
null
sabdab_dataset/5ihz/abangle/5ihz.abangle
sabdab_dataset/5ihz/annotation/5ihz_H_VH.ann
sabdab_dataset/5ihz/annotation/5ihz_L_VL.ann
sabdab_dataset/5ihz/imgt/5ihz_H_H.ann
sabdab_dataset/5ihz/imgt/5ihz_L_L.ann
sabdab_dataset/5ihz/sequence/5ihz_raw.pdb
sabdab_dataset/5ihz/sequence/5ihz_H_VH.fa
sabdab_dataset/5ihz/sequence/5ihz_L_VL.fa
sabdab_dataset/5ihz/structure/5ihz.pdb
sabdab_dataset/5ihz/structure/chothia/5ihz.pdb
false
false
train
5iie
A
B
0
null
null
null
null
IMMUNE SYSTEM
03/01/16
STRUCTURE OF THE UNLIGANDED ANTI-HIV ANTIBODY DH501 THAT BINDS GP120 V3 GLYCAN AND THE BASE OF V3
HOMO SAPIENS
homo sapiens
homo sapiens
null
Nicely, N.I., Haynes, B.F.
2.8
X-RAY DIFFRACTION
0.273
0.206
false
true
IGHV2
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5iie/abangle/5iie.abangle
sabdab_dataset/5iie/annotation/5iie_A_VH.ann
sabdab_dataset/5iie/annotation/5iie_B_VL.ann
sabdab_dataset/5iie/imgt/5iie_A_H.ann
sabdab_dataset/5iie/imgt/5iie_B_L.ann
sabdab_dataset/5iie/sequence/5iie_raw.pdb
sabdab_dataset/5iie/sequence/5iie_A_VH.fa
sabdab_dataset/5iie/sequence/5iie_B_VL.fa
sabdab_dataset/5iie/structure/5iie.pdb
sabdab_dataset/5iie/structure/chothia/5iie.pdb
false
false
train
5iie
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/01/16
STRUCTURE OF THE UNLIGANDED ANTI-HIV ANTIBODY DH501 THAT BINDS GP120 V3 GLYCAN AND THE BASE OF V3
HOMO SAPIENS
homo sapiens
homo sapiens
null
Nicely, N.I., Haynes, B.F.
2.8
X-RAY DIFFRACTION
0.273
0.206
false
true
IGHV2
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5iie/abangle/5iie.abangle
sabdab_dataset/5iie/annotation/5iie_H_VH.ann
sabdab_dataset/5iie/annotation/5iie_L_VL.ann
sabdab_dataset/5iie/imgt/5iie_H_H.ann
sabdab_dataset/5iie/imgt/5iie_L_L.ann
sabdab_dataset/5iie/sequence/5iie_raw.pdb
sabdab_dataset/5iie/sequence/5iie_H_VH.fa
sabdab_dataset/5iie/sequence/5iie_L_VL.fa
sabdab_dataset/5iie/structure/5iie.pdb
sabdab_dataset/5iie/structure/chothia/5iie.pdb
false
false
train
5ijk
A
C
0
X
peptide
null
peptide pro-leu-gln-pro-glu-gln-pro-phe-pro
IMMUNE SYSTEM
03/02/16
Crystal structure of anti-gliadin 1002-1E03 Fab fragment in complex of peptide PLQPEQPFP
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
triticum aestivum
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
2.5
X-RAY DIFFRACTION
0.265
0.209
false
true
IGHV3
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/5ijk/abangle/5ijk.abangle
sabdab_dataset/5ijk/annotation/5ijk_A_VH.ann
sabdab_dataset/5ijk/annotation/5ijk_C_VL.ann
sabdab_dataset/5ijk/imgt/5ijk_A_H.ann
sabdab_dataset/5ijk/imgt/5ijk_C_L.ann
sabdab_dataset/5ijk/sequence/5ijk_raw.pdb
sabdab_dataset/5ijk/sequence/5ijk_A_VH.fa
sabdab_dataset/5ijk/sequence/5ijk_C_VL.fa
sabdab_dataset/5ijk/structure/5ijk.pdb
sabdab_dataset/5ijk/structure/chothia/5ijk.pdb
true
false
validation
5ijk
B
D
0
Y
peptide
null
peptide pro-leu-gln-pro-glu-gln-pro-phe-pro
IMMUNE SYSTEM
03/02/16
Crystal structure of anti-gliadin 1002-1E03 Fab fragment in complex of peptide PLQPEQPFP
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
triticum aestivum
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
2.5
X-RAY DIFFRACTION
0.265
0.209
false
true
IGHV3
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/5ijk/abangle/5ijk.abangle
sabdab_dataset/5ijk/annotation/5ijk_B_VH.ann
sabdab_dataset/5ijk/annotation/5ijk_D_VL.ann
sabdab_dataset/5ijk/imgt/5ijk_B_H.ann
sabdab_dataset/5ijk/imgt/5ijk_D_L.ann
sabdab_dataset/5ijk/sequence/5ijk_raw.pdb
sabdab_dataset/5ijk/sequence/5ijk_B_VH.fa
sabdab_dataset/5ijk/sequence/5ijk_D_VL.fa
sabdab_dataset/5ijk/structure/5ijk.pdb
sabdab_dataset/5ijk/structure/chothia/5ijk.pdb
true
false
train
5ijv
B
A
0
null
null
null
null
IMMUNE SYSTEM
03/02/16
Crystal structure of bovine Fab E03
BOS TAURUS
bos taurus
bos taurus
null
Stanfield, R.L., Wilson, I.A.
2.2
X-RAY DIFFRACTION
0.247
0.204
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5ijv/abangle/5ijv.abangle
sabdab_dataset/5ijv/annotation/5ijv_B_VH.ann
sabdab_dataset/5ijv/annotation/5ijv_A_VL.ann
sabdab_dataset/5ijv/imgt/5ijv_B_H.ann
sabdab_dataset/5ijv/imgt/5ijv_A_L.ann
sabdab_dataset/5ijv/sequence/5ijv_raw.pdb
sabdab_dataset/5ijv/sequence/5ijv_B_VH.fa
sabdab_dataset/5ijv/sequence/5ijv_A_VL.fa
sabdab_dataset/5ijv/structure/5ijv.pdb
sabdab_dataset/5ijv/structure/chothia/5ijv.pdb
false
false
train
5ijv
D
C
0
null
null
null
null
IMMUNE SYSTEM
03/02/16
Crystal structure of bovine Fab E03
BOS TAURUS
bos taurus
bos taurus
null
Stanfield, R.L., Wilson, I.A.
2.2
X-RAY DIFFRACTION
0.247
0.204
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5ijv/abangle/5ijv.abangle
sabdab_dataset/5ijv/annotation/5ijv_D_VH.ann
sabdab_dataset/5ijv/annotation/5ijv_C_VL.ann
sabdab_dataset/5ijv/imgt/5ijv_D_H.ann
sabdab_dataset/5ijv/imgt/5ijv_C_L.ann
sabdab_dataset/5ijv/sequence/5ijv_raw.pdb
sabdab_dataset/5ijv/sequence/5ijv_D_VH.fa
sabdab_dataset/5ijv/sequence/5ijv_C_VL.fa
sabdab_dataset/5ijv/structure/5ijv.pdb
sabdab_dataset/5ijv/structure/chothia/5ijv.pdb
false
false
train
5ijv
F
E
0
null
null
null
null
IMMUNE SYSTEM
03/02/16
Crystal structure of bovine Fab E03
BOS TAURUS
bos taurus
bos taurus
null
Stanfield, R.L., Wilson, I.A.
2.2
X-RAY DIFFRACTION
0.247
0.204
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5ijv/abangle/5ijv.abangle
sabdab_dataset/5ijv/annotation/5ijv_F_VH.ann
sabdab_dataset/5ijv/annotation/5ijv_E_VL.ann
sabdab_dataset/5ijv/imgt/5ijv_F_H.ann
sabdab_dataset/5ijv/imgt/5ijv_E_L.ann
sabdab_dataset/5ijv/sequence/5ijv_raw.pdb
sabdab_dataset/5ijv/sequence/5ijv_F_VH.fa
sabdab_dataset/5ijv/sequence/5ijv_E_VL.fa
sabdab_dataset/5ijv/structure/5ijv.pdb
sabdab_dataset/5ijv/structure/chothia/5ijv.pdb
false
false
train
5ijv
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/02/16
Crystal structure of bovine Fab E03
BOS TAURUS
bos taurus
bos taurus
null
Stanfield, R.L., Wilson, I.A.
2.2
X-RAY DIFFRACTION
0.247
0.204
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5ijv/abangle/5ijv.abangle
sabdab_dataset/5ijv/annotation/5ijv_H_VH.ann
sabdab_dataset/5ijv/annotation/5ijv_L_VL.ann
sabdab_dataset/5ijv/imgt/5ijv_H_H.ann
sabdab_dataset/5ijv/imgt/5ijv_L_L.ann
sabdab_dataset/5ijv/sequence/5ijv_raw.pdb
sabdab_dataset/5ijv/sequence/5ijv_H_VH.fa
sabdab_dataset/5ijv/sequence/5ijv_L_VL.fa
sabdab_dataset/5ijv/structure/5ijv.pdb
sabdab_dataset/5ijv/structure/chothia/5ijv.pdb
false
false
train
5ik3
A
B
0
null
null
null
null
IMMUNE SYSTEM
03/03/16
Crystal structure of anti-gliadin 1002-1E03 Fab fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
1.65
X-RAY DIFFRACTION
0.236
0.196
false
true
IGHV3
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/5ik3/abangle/5ik3.abangle
sabdab_dataset/5ik3/annotation/5ik3_A_VH.ann
sabdab_dataset/5ik3/annotation/5ik3_B_VL.ann
sabdab_dataset/5ik3/imgt/5ik3_A_H.ann
sabdab_dataset/5ik3/imgt/5ik3_B_L.ann
sabdab_dataset/5ik3/sequence/5ik3_raw.pdb
sabdab_dataset/5ik3/sequence/5ik3_A_VH.fa
sabdab_dataset/5ik3/sequence/5ik3_B_VL.fa
sabdab_dataset/5ik3/structure/5ik3.pdb
sabdab_dataset/5ik3/structure/chothia/5ik3.pdb
false
false
train
5ik3
C
D
0
null
null
null
null
IMMUNE SYSTEM
03/03/16
Crystal structure of anti-gliadin 1002-1E03 Fab fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.
1.65
X-RAY DIFFRACTION
0.236
0.196
false
true
IGHV3
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/5ik3/abangle/5ik3.abangle
sabdab_dataset/5ik3/annotation/5ik3_C_VH.ann
sabdab_dataset/5ik3/annotation/5ik3_D_VL.ann
sabdab_dataset/5ik3/imgt/5ik3_C_H.ann
sabdab_dataset/5ik3/imgt/5ik3_D_L.ann
sabdab_dataset/5ik3/sequence/5ik3_raw.pdb
sabdab_dataset/5ik3/sequence/5ik3_C_VH.fa
sabdab_dataset/5ik3/sequence/5ik3_D_VL.fa
sabdab_dataset/5ik3/structure/5ik3.pdb
sabdab_dataset/5ik3/structure/chothia/5ik3.pdb
false
false
train
5ikc
B
A
0
M
protein
null
neuronal migration protein doublecortin
TRANSFERASE
03/03/16
X-RAY STRUCURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN in complex with FAB
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Ruf, A., Stihle, M., Benz, J., Thoma, R., Rudolph, M.G.
2.06
X-RAY DIFFRACTION
0.265
0.198
false
true
IGHV14
IGKV6
Kappa
0
-10.325467
SPR
null
TBD
sabdab_dataset/5ikc/abangle/5ikc.abangle
sabdab_dataset/5ikc/annotation/5ikc_B_VH.ann
sabdab_dataset/5ikc/annotation/5ikc_A_VL.ann
sabdab_dataset/5ikc/imgt/5ikc_B_H.ann
sabdab_dataset/5ikc/imgt/5ikc_A_L.ann
sabdab_dataset/5ikc/sequence/5ikc_raw.pdb
sabdab_dataset/5ikc/sequence/5ikc_B_VH.fa
sabdab_dataset/5ikc/sequence/5ikc_A_VL.fa
sabdab_dataset/5ikc/structure/5ikc.pdb
sabdab_dataset/5ikc/structure/chothia/5ikc.pdb
true
false
train
5ikc
H
L
0
N
protein
null
neuronal migration protein doublecortin
TRANSFERASE
03/03/16
X-RAY STRUCURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN in complex with FAB
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Ruf, A., Stihle, M., Benz, J., Thoma, R., Rudolph, M.G.
2.06
X-RAY DIFFRACTION
0.265
0.198
false
true
IGHV14
IGKV6
Kappa
0
-10.325467
SPR
null
TBD
sabdab_dataset/5ikc/abangle/5ikc.abangle
sabdab_dataset/5ikc/annotation/5ikc_H_VH.ann
sabdab_dataset/5ikc/annotation/5ikc_L_VL.ann
sabdab_dataset/5ikc/imgt/5ikc_H_H.ann
sabdab_dataset/5ikc/imgt/5ikc_L_L.ann
sabdab_dataset/5ikc/sequence/5ikc_raw.pdb
sabdab_dataset/5ikc/sequence/5ikc_H_VH.fa
sabdab_dataset/5ikc/sequence/5ikc_L_VL.fa
sabdab_dataset/5ikc/structure/5ikc.pdb
sabdab_dataset/5ikc/structure/chothia/5ikc.pdb
true
false
train
5ilt
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/04/16
Crystal structure of bovine Fab A01
BOS TAURUS
bos taurus
bos taurus
null
Stanfield, R.L., Wilson, I.A.
2.0
X-RAY DIFFRACTION
0.254
0.212
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/5ilt/abangle/5ilt.abangle
sabdab_dataset/5ilt/annotation/5ilt_H_VH.ann
sabdab_dataset/5ilt/annotation/5ilt_L_VL.ann
sabdab_dataset/5ilt/imgt/5ilt_H_H.ann
sabdab_dataset/5ilt/imgt/5ilt_L_L.ann
sabdab_dataset/5ilt/sequence/5ilt_raw.pdb
sabdab_dataset/5ilt/sequence/5ilt_H_VH.fa
sabdab_dataset/5ilt/sequence/5ilt_L_VL.fa
sabdab_dataset/5ilt/structure/5ilt.pdb
sabdab_dataset/5ilt/structure/chothia/5ilt.pdb
false
false
train
5imk
B
null
0
A
protein
null
v-set and immunoglobulin domain-containing protein 4
IMMUNE SYSTEM
03/06/16
Nanobody targeting human Vsig4 in Spacegroup C2
HOMO SAPIENS; CAMELIDAE
camelidae
null
homo sapiens
Wen, Y.
1.227
X-RAY DIFFRACTION
0.185
0.172
false
true
IGHV1
null
null
0.000001
-8.281754
ITC
null
TBD
null
sabdab_dataset/5imk/annotation/5imk_B_VH.ann
null
sabdab_dataset/5imk/imgt/5imk_B_H.ann
null
sabdab_dataset/5imk/sequence/5imk_raw.pdb
sabdab_dataset/5imk/sequence/5imk_B_VH.fa
null
sabdab_dataset/5imk/structure/5imk.pdb
sabdab_dataset/5imk/structure/chothia/5imk.pdb
false
false
train
5iml
B
null
0
A
protein
null
v-set and immunoglobulin domain-containing protein 4
IMMUNE SYSTEM
03/06/16
Nanobody targeting human Vsig4 in Spacegroup P212121
HOMO SAPIENS; CAMELIDAE
camelidae
null
homo sapiens
Wen, Y.
1.8
X-RAY DIFFRACTION
0.226
0.181
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/5iml/annotation/5iml_B_VH.ann
null
sabdab_dataset/5iml/imgt/5iml_B_H.ann
null
sabdab_dataset/5iml/sequence/5iml_raw.pdb
sabdab_dataset/5iml/sequence/5iml_B_VH.fa
null
sabdab_dataset/5iml/structure/5iml.pdb
sabdab_dataset/5iml/structure/chothia/5iml.pdb
false
false
test
5imm
B
null
0
A
protein
null
protein vsig4
IMMUNE SYSTEM
03/06/16
Nanobody targeting mouse Vsig4 in Spacegroup P212121
MUS MUSCULUS; CAMELIDAE
camelidae
null
mus musculus
Wen, Y., Zheng, F.
1.2
X-RAY DIFFRACTION
0.176
0.156
false
true
IGHV1
null
null
0
-11.535955
ITC
null
TBD
null
sabdab_dataset/5imm/annotation/5imm_B_VH.ann
null
sabdab_dataset/5imm/imgt/5imm_B_H.ann
null
sabdab_dataset/5imm/sequence/5imm_raw.pdb
sabdab_dataset/5imm/sequence/5imm_B_VH.fa
null
sabdab_dataset/5imm/structure/5imm.pdb
sabdab_dataset/5imm/structure/chothia/5imm.pdb
false
false
train
5imo
B
null
0
A
protein
null
protein vsig4
IMMUNE SYSTEM
03/06/16
Nanobody targeting mouse Vsig4 in Spacegroup P3221
CAMELIDAE; MUS MUSCULUS
camelidae
null
mus musculus
Wen, Y., Zheng, F.
2.1
X-RAY DIFFRACTION
0.281
0.241
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/5imo/annotation/5imo_B_VH.ann
null
sabdab_dataset/5imo/imgt/5imo_B_H.ann
null
sabdab_dataset/5imo/sequence/5imo_raw.pdb
sabdab_dataset/5imo/sequence/5imo_B_VH.fa
null
sabdab_dataset/5imo/structure/5imo.pdb
sabdab_dataset/5imo/structure/chothia/5imo.pdb
false
false
train
5iop
B
A
0
null
null
null
null
IMMUNE SYSTEM
03/08/16
Cetuximab Fab in complex with 4-bromophenylalanine meditope variant
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.499
X-RAY DIFFRACTION
0.226
0.177
false
true
IGHV2
IGKV5
Kappa
0.000029
-6.190397
Unknown
null
TBD
sabdab_dataset/5iop/abangle/5iop.abangle
sabdab_dataset/5iop/annotation/5iop_B_VH.ann
sabdab_dataset/5iop/annotation/5iop_A_VL.ann
sabdab_dataset/5iop/imgt/5iop_B_H.ann
sabdab_dataset/5iop/imgt/5iop_A_L.ann
sabdab_dataset/5iop/sequence/5iop_raw.pdb
sabdab_dataset/5iop/sequence/5iop_B_VH.fa
sabdab_dataset/5iop/sequence/5iop_A_VL.fa
sabdab_dataset/5iop/structure/5iop.pdb
sabdab_dataset/5iop/structure/chothia/5iop.pdb
false
false
validation
5iop
D
C
0
null
null
null
null
IMMUNE SYSTEM
03/08/16
Cetuximab Fab in complex with 4-bromophenylalanine meditope variant
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.499
X-RAY DIFFRACTION
0.226
0.177
false
true
IGHV2
IGKV5
Kappa
0.000029
-6.190397
Unknown
null
TBD
sabdab_dataset/5iop/abangle/5iop.abangle
sabdab_dataset/5iop/annotation/5iop_D_VH.ann
sabdab_dataset/5iop/annotation/5iop_C_VL.ann
sabdab_dataset/5iop/imgt/5iop_D_H.ann
sabdab_dataset/5iop/imgt/5iop_C_L.ann
sabdab_dataset/5iop/sequence/5iop_raw.pdb
sabdab_dataset/5iop/sequence/5iop_D_VH.fa
sabdab_dataset/5iop/sequence/5iop_C_VL.fa
sabdab_dataset/5iop/structure/5iop.pdb
sabdab_dataset/5iop/structure/chothia/5iop.pdb
false
false
train
5ip4
A
null
0
E
protein
null
neuronal migration protein doublecortin
TRANSFERASE
03/09/16
X-RAY STRUCTURE OF THE C-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN
HOMO SAPIENS; LAMA GLAMA
lama glama
null
homo sapiens
Ruf, A., Benz, J., Burger, D., D'Arcy, B., Debulpaep, M., Di Lello, P., Fry, D., Huber, W., Kremer, T., Laeremans, T., Matile, H., Ross, A., Rudolph, M.G., Rufer, A.C., Sharma, A., Steinmetz, M.O., Steyaert, J., Schoch, G., Stihle, M., Thoma, R.
1.81
X-RAY DIFFRACTION
0.246
0.194
false
true
IGHV1
null
null
0
-8.657252
SPR
null
TBD
null
sabdab_dataset/5ip4/annotation/5ip4_A_VH.ann
null
sabdab_dataset/5ip4/imgt/5ip4_A_H.ann
null
sabdab_dataset/5ip4/sequence/5ip4_raw.pdb
sabdab_dataset/5ip4/sequence/5ip4_A_VH.fa
null
sabdab_dataset/5ip4/structure/5ip4.pdb
sabdab_dataset/5ip4/structure/chothia/5ip4.pdb
true
true
train
5ip4
B
null
0
D
protein
null
neuronal migration protein doublecortin
TRANSFERASE
03/09/16
X-RAY STRUCTURE OF THE C-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN
HOMO SAPIENS; LAMA GLAMA
lama glama
null
homo sapiens
Ruf, A., Benz, J., Burger, D., D'Arcy, B., Debulpaep, M., Di Lello, P., Fry, D., Huber, W., Kremer, T., Laeremans, T., Matile, H., Ross, A., Rudolph, M.G., Rufer, A.C., Sharma, A., Steinmetz, M.O., Steyaert, J., Schoch, G., Stihle, M., Thoma, R.
1.81
X-RAY DIFFRACTION
0.246
0.194
false
true
IGHV1
null
null
0
-8.657252
SPR
null
TBD
null
sabdab_dataset/5ip4/annotation/5ip4_B_VH.ann
null
sabdab_dataset/5ip4/imgt/5ip4_B_H.ann
null
sabdab_dataset/5ip4/sequence/5ip4_raw.pdb
sabdab_dataset/5ip4/sequence/5ip4_B_VH.fa
null
sabdab_dataset/5ip4/structure/5ip4.pdb
sabdab_dataset/5ip4/structure/chothia/5ip4.pdb
true
false
train
5iq7
H
L
0
P
peptide
null
gp41 mper peptide
IMMUNE SYSTEM
03/10/16
Crystal structure of 10E8-S74W Fab in complex with an HIV-1 gp41 peptide.
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Ofek, G., Kwon, Y.D., Caruso, W., Kwong, P.D.
3.2869
X-RAY DIFFRACTION
0.282
0.230
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/5iq7/abangle/5iq7.abangle
sabdab_dataset/5iq7/annotation/5iq7_H_VH.ann
sabdab_dataset/5iq7/annotation/5iq7_L_VL.ann
sabdab_dataset/5iq7/imgt/5iq7_H_H.ann
sabdab_dataset/5iq7/imgt/5iq7_L_L.ann
sabdab_dataset/5iq7/sequence/5iq7_raw.pdb
sabdab_dataset/5iq7/sequence/5iq7_H_VH.fa
sabdab_dataset/5iq7/sequence/5iq7_L_VL.fa
sabdab_dataset/5iq7/structure/5iq7.pdb
sabdab_dataset/5iq7/structure/chothia/5iq7.pdb
false
false
train
5iq9
A
B
0
C
peptide
null
gp41 mper peptide
IMMUNE SYSTEM
03/10/16
Crystal structure of 10E8v4 Fab in complex with an HIV-1 gp41 peptide.
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Ofek, G., Kwon, Y.D., Caruso, W., Kwong, P.D.
2.4
X-RAY DIFFRACTION
0.236
0.191
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/5iq9/abangle/5iq9.abangle
sabdab_dataset/5iq9/annotation/5iq9_A_VH.ann
sabdab_dataset/5iq9/annotation/5iq9_B_VL.ann
sabdab_dataset/5iq9/imgt/5iq9_A_H.ann
sabdab_dataset/5iq9/imgt/5iq9_B_L.ann
sabdab_dataset/5iq9/sequence/5iq9_raw.pdb
sabdab_dataset/5iq9/sequence/5iq9_A_VH.fa
sabdab_dataset/5iq9/sequence/5iq9_B_VL.fa
sabdab_dataset/5iq9/structure/5iq9.pdb
sabdab_dataset/5iq9/structure/chothia/5iq9.pdb
false
false
train
5iq9
H
L
0
P
peptide
null
gp41 mper peptide
IMMUNE SYSTEM
03/10/16
Crystal structure of 10E8v4 Fab in complex with an HIV-1 gp41 peptide.
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Ofek, G., Kwon, Y.D., Caruso, W., Kwong, P.D.
2.4
X-RAY DIFFRACTION
0.236
0.191
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/5iq9/abangle/5iq9.abangle
sabdab_dataset/5iq9/annotation/5iq9_H_VH.ann
sabdab_dataset/5iq9/annotation/5iq9_L_VL.ann
sabdab_dataset/5iq9/imgt/5iq9_H_H.ann
sabdab_dataset/5iq9/imgt/5iq9_L_L.ann
sabdab_dataset/5iq9/sequence/5iq9_raw.pdb
sabdab_dataset/5iq9/sequence/5iq9_H_VH.fa
sabdab_dataset/5iq9/sequence/5iq9_L_VL.fa
sabdab_dataset/5iq9/structure/5iq9.pdb
sabdab_dataset/5iq9/structure/chothia/5iq9.pdb
false
false
train
5ir1
B
A
0
null
null
null
null
IMMUNE SYSTEM
03/11/16
Cetuximab Fab in complex with 3-bromophenylalanine meditope variant
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.482
X-RAY DIFFRACTION
0.215
0.163
false
true
IGHV2
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/5ir1/abangle/5ir1.abangle
sabdab_dataset/5ir1/annotation/5ir1_B_VH.ann
sabdab_dataset/5ir1/annotation/5ir1_A_VL.ann
sabdab_dataset/5ir1/imgt/5ir1_B_H.ann
sabdab_dataset/5ir1/imgt/5ir1_A_L.ann
sabdab_dataset/5ir1/sequence/5ir1_raw.pdb
sabdab_dataset/5ir1/sequence/5ir1_B_VH.fa
sabdab_dataset/5ir1/sequence/5ir1_A_VL.fa
sabdab_dataset/5ir1/structure/5ir1.pdb
sabdab_dataset/5ir1/structure/chothia/5ir1.pdb
false
false
train
5ir1
D
C
0
null
null
null
null
IMMUNE SYSTEM
03/11/16
Cetuximab Fab in complex with 3-bromophenylalanine meditope variant
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.482
X-RAY DIFFRACTION
0.215
0.163
false
true
IGHV2
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/5ir1/abangle/5ir1.abangle
sabdab_dataset/5ir1/annotation/5ir1_D_VH.ann
sabdab_dataset/5ir1/annotation/5ir1_C_VL.ann
sabdab_dataset/5ir1/imgt/5ir1_D_H.ann
sabdab_dataset/5ir1/imgt/5ir1_C_L.ann
sabdab_dataset/5ir1/sequence/5ir1_raw.pdb
sabdab_dataset/5ir1/sequence/5ir1_D_VH.fa
sabdab_dataset/5ir1/sequence/5ir1_C_VL.fa
sabdab_dataset/5ir1/structure/5ir1.pdb
sabdab_dataset/5ir1/structure/chothia/5ir1.pdb
false
false
test
5ir3
null
A
0
null
null
null
null
IMMUNE SYSTEM
03/11/16
Crystal structure of the recombinant highest fibrillogenic natural mutant (obtained from patient AR) derived from lambda 6 light chain variable domain
HOMO SAPIENS
null
homo sapiens
null
Hernandez-Santoyo, A., Rodriguez-Romero, A.
1.7
X-RAY DIFFRACTION
0.207
0.174
false
true
null
IGLV6
Lambda
null
null
null
null
null
null
null
sabdab_dataset/5ir3/annotation/5ir3_A_VL.ann
null
sabdab_dataset/5ir3/imgt/5ir3_A_L.ann
sabdab_dataset/5ir3/sequence/5ir3_raw.pdb
null
sabdab_dataset/5ir3/sequence/5ir3_A_VL.fa
sabdab_dataset/5ir3/structure/5ir3.pdb
sabdab_dataset/5ir3/structure/chothia/5ir3.pdb
true
false
train
5it2
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/16/16
Structure of a transglutaminase 2-specific autoantibody 693-10-B06 Fab fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Chen, X., Dalhus, B., Hnida, K., Iversen, R., Sollid, L.M.
1.7
X-RAY DIFFRACTION
0.204
0.185
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5it2/abangle/5it2.abangle
sabdab_dataset/5it2/annotation/5it2_H_VH.ann
sabdab_dataset/5it2/annotation/5it2_L_VL.ann
sabdab_dataset/5it2/imgt/5it2_H_H.ann
sabdab_dataset/5it2/imgt/5it2_L_L.ann
sabdab_dataset/5it2/sequence/5it2_raw.pdb
sabdab_dataset/5it2/sequence/5it2_H_VH.fa
sabdab_dataset/5it2/sequence/5it2_L_VL.fa
sabdab_dataset/5it2/structure/5it2.pdb
sabdab_dataset/5it2/structure/chothia/5it2.pdb
false
false
train
5itb
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/16/16
Crystal structure of the anti-RSV F Fab 14N4
HOMO SAPIENS
homo sapiens
homo sapiens
null
Mousa, J.J., Crowe, J.E.
2.0
X-RAY DIFFRACTION
0.214
0.194
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/5itb/abangle/5itb.abangle
sabdab_dataset/5itb/annotation/5itb_H_VH.ann
sabdab_dataset/5itb/annotation/5itb_L_VL.ann
sabdab_dataset/5itb/imgt/5itb_H_H.ann
sabdab_dataset/5itb/imgt/5itb_L_L.ann
sabdab_dataset/5itb/sequence/5itb_raw.pdb
sabdab_dataset/5itb/sequence/5itb_H_VH.fa
sabdab_dataset/5itb/sequence/5itb_L_VL.fa
sabdab_dataset/5itb/structure/5itb.pdb
sabdab_dataset/5itb/structure/chothia/5itb.pdb
false
false
validation
5itf
B
A
0
null
null
null
null
IMMUNE SYSTEM
03/16/16
Cetuximab Fab in complex with 2-bromophenylalanine meditope variant
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.51
X-RAY DIFFRACTION
0.223
0.184
false
true
IGHV2
IGKV5
Kappa
0.000002
-7.837211
Unknown
null
TBD
sabdab_dataset/5itf/abangle/5itf.abangle
sabdab_dataset/5itf/annotation/5itf_B_VH.ann
sabdab_dataset/5itf/annotation/5itf_A_VL.ann
sabdab_dataset/5itf/imgt/5itf_B_H.ann
sabdab_dataset/5itf/imgt/5itf_A_L.ann
sabdab_dataset/5itf/sequence/5itf_raw.pdb
sabdab_dataset/5itf/sequence/5itf_B_VH.fa
sabdab_dataset/5itf/sequence/5itf_A_VL.fa
sabdab_dataset/5itf/structure/5itf.pdb
sabdab_dataset/5itf/structure/chothia/5itf.pdb
false
false
train
5itf
D
C
0
null
null
null
null
IMMUNE SYSTEM
03/16/16
Cetuximab Fab in complex with 2-bromophenylalanine meditope variant
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.51
X-RAY DIFFRACTION
0.223
0.184
false
true
IGHV2
IGKV5
Kappa
0.000002
-7.837211
Unknown
null
TBD
sabdab_dataset/5itf/abangle/5itf.abangle
sabdab_dataset/5itf/annotation/5itf_D_VH.ann
sabdab_dataset/5itf/annotation/5itf_C_VL.ann
sabdab_dataset/5itf/imgt/5itf_D_H.ann
sabdab_dataset/5itf/imgt/5itf_C_L.ann
sabdab_dataset/5itf/sequence/5itf_raw.pdb
sabdab_dataset/5itf/sequence/5itf_D_VH.fa
sabdab_dataset/5itf/sequence/5itf_C_VL.fa
sabdab_dataset/5itf/structure/5itf.pdb
sabdab_dataset/5itf/structure/chothia/5itf.pdb
false
false
test
5iv2
B
A
0
null
null
null
null
IMMUNE SYSTEM
03/18/16
Cetuximab Fab in complex with Arg9Cir meditope variant
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.481
X-RAY DIFFRACTION
0.211
0.165
false
true
IGHV2
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/5iv2/abangle/5iv2.abangle
sabdab_dataset/5iv2/annotation/5iv2_B_VH.ann
sabdab_dataset/5iv2/annotation/5iv2_A_VL.ann
sabdab_dataset/5iv2/imgt/5iv2_B_H.ann
sabdab_dataset/5iv2/imgt/5iv2_A_L.ann
sabdab_dataset/5iv2/sequence/5iv2_raw.pdb
sabdab_dataset/5iv2/sequence/5iv2_B_VH.fa
sabdab_dataset/5iv2/sequence/5iv2_A_VL.fa
sabdab_dataset/5iv2/structure/5iv2.pdb
sabdab_dataset/5iv2/structure/chothia/5iv2.pdb
false
false
validation
5iv2
D
C
0
null
null
null
null
IMMUNE SYSTEM
03/18/16
Cetuximab Fab in complex with Arg9Cir meditope variant
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.481
X-RAY DIFFRACTION
0.211
0.165
false
true
IGHV2
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/5iv2/abangle/5iv2.abangle
sabdab_dataset/5iv2/annotation/5iv2_D_VH.ann
sabdab_dataset/5iv2/annotation/5iv2_C_VL.ann
sabdab_dataset/5iv2/imgt/5iv2_D_H.ann
sabdab_dataset/5iv2/imgt/5iv2_C_L.ann
sabdab_dataset/5iv2/sequence/5iv2_raw.pdb
sabdab_dataset/5iv2/sequence/5iv2_D_VH.fa
sabdab_dataset/5iv2/sequence/5iv2_C_VL.fa
sabdab_dataset/5iv2/structure/5iv2.pdb
sabdab_dataset/5iv2/structure/chothia/5iv2.pdb
false
false
train
5ivn
A
null
0
B
peptide
null
cadherin derived peptide
PEPTIDE BINDING PROTEIN
03/21/16
BC2 nanobody in complex with the BC2 peptide tag
VICUGNA PACOS; SYNTHETIC CONSTRUCT
vicugna pacos
null
homo sapiens
Braun, M.B., Stehle, T.
1.0
X-RAY DIFFRACTION
0.150
0.128
false
true
IGHV1
null
null
0
-12.078842
Unknown
null
TBD
null
sabdab_dataset/5ivn/annotation/5ivn_A_VH.ann
null
sabdab_dataset/5ivn/imgt/5ivn_A_H.ann
null
sabdab_dataset/5ivn/sequence/5ivn_raw.pdb
sabdab_dataset/5ivn/sequence/5ivn_A_VH.fa
null
sabdab_dataset/5ivn/structure/5ivn.pdb
sabdab_dataset/5ivn/structure/chothia/5ivn.pdb
true
true
train
5ivo
A
null
0
null
null
null
null
PEPTIDE BINDING PROTEIN
03/21/16
BC2 nanobody
VICUGNA PACOS
vicugna pacos
null
null
Braun, M.B., Stehle, T.
1.8
X-RAY DIFFRACTION
0.222
0.187
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/5ivo/annotation/5ivo_A_VH.ann
null
sabdab_dataset/5ivo/imgt/5ivo_A_H.ann
null
sabdab_dataset/5ivo/sequence/5ivo_raw.pdb
sabdab_dataset/5ivo/sequence/5ivo_A_VH.fa
null
sabdab_dataset/5ivo/structure/5ivo.pdb
sabdab_dataset/5ivo/structure/chothia/5ivo.pdb
false
false
validation
5ivz
B
A
0
null
null
null
null
IMMUNE SYSTEM
03/21/16
Cetuximab Fab in complex with Arg8Cir meditope variant
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.48
X-RAY DIFFRACTION
0.230
0.176
false
true
IGHV2
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/5ivz/abangle/5ivz.abangle
sabdab_dataset/5ivz/annotation/5ivz_B_VH.ann
sabdab_dataset/5ivz/annotation/5ivz_A_VL.ann
sabdab_dataset/5ivz/imgt/5ivz_B_H.ann
sabdab_dataset/5ivz/imgt/5ivz_A_L.ann
sabdab_dataset/5ivz/sequence/5ivz_raw.pdb
sabdab_dataset/5ivz/sequence/5ivz_B_VH.fa
sabdab_dataset/5ivz/sequence/5ivz_A_VL.fa
sabdab_dataset/5ivz/structure/5ivz.pdb
sabdab_dataset/5ivz/structure/chothia/5ivz.pdb
false
false
train
5ivz
D
C
0
null
null
null
null
IMMUNE SYSTEM
03/21/16
Cetuximab Fab in complex with Arg8Cir meditope variant
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.48
X-RAY DIFFRACTION
0.230
0.176
false
true
IGHV2
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/5ivz/abangle/5ivz.abangle
sabdab_dataset/5ivz/annotation/5ivz_D_VH.ann
sabdab_dataset/5ivz/annotation/5ivz_C_VL.ann
sabdab_dataset/5ivz/imgt/5ivz_D_H.ann
sabdab_dataset/5ivz/imgt/5ivz_C_L.ann
sabdab_dataset/5ivz/sequence/5ivz_raw.pdb
sabdab_dataset/5ivz/sequence/5ivz_D_VH.fa
sabdab_dataset/5ivz/sequence/5ivz_C_VL.fa
sabdab_dataset/5ivz/structure/5ivz.pdb
sabdab_dataset/5ivz/structure/chothia/5ivz.pdb
false
false
train
5iwl
A
a
0
D
protein
null
leukocyte surface antigen cd47
CELL ADHESION
03/22/16
CD47-diabody complex
HOMO SAPIENS
homo sapiens
null
homo sapiens
Di, W., Jude, K.M., Garcia, K.C.
2.8
X-RAY DIFFRACTION
0.267
0.221
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/5iwl/abangle/5iwl.abangle
sabdab_dataset/5iwl/annotation/5iwl_A_VH.ann
sabdab_dataset/5iwl/annotation/5iwl_A_VL.ann
sabdab_dataset/5iwl/imgt/5iwl_A_H.ann
sabdab_dataset/5iwl/imgt/5iwl_A_L.ann
sabdab_dataset/5iwl/sequence/5iwl_raw.pdb
sabdab_dataset/5iwl/sequence/5iwl_A_VH.fa
sabdab_dataset/5iwl/sequence/5iwl_A_VL.fa
sabdab_dataset/5iwl/structure/5iwl.pdb
sabdab_dataset/5iwl/structure/chothia/5iwl.pdb
true
true
test
5iwl
B
b
0
C
protein
null
leukocyte surface antigen cd47
CELL ADHESION
03/22/16
CD47-diabody complex
HOMO SAPIENS
homo sapiens
null
homo sapiens
Di, W., Jude, K.M., Garcia, K.C.
2.8
X-RAY DIFFRACTION
0.267
0.221
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/5iwl/abangle/5iwl.abangle
sabdab_dataset/5iwl/annotation/5iwl_B_VH.ann
sabdab_dataset/5iwl/annotation/5iwl_B_VL.ann
sabdab_dataset/5iwl/imgt/5iwl_B_H.ann
sabdab_dataset/5iwl/imgt/5iwl_B_L.ann
sabdab_dataset/5iwl/sequence/5iwl_raw.pdb
sabdab_dataset/5iwl/sequence/5iwl_B_VH.fa
sabdab_dataset/5iwl/sequence/5iwl_B_VL.fa
sabdab_dataset/5iwl/structure/5iwl.pdb
sabdab_dataset/5iwl/structure/chothia/5iwl.pdb
true
false
train
5j13
C
B
0
A
protein
null
thymic stromal lymphopoietin
IMMUNE SYSTEM
03/28/16
Cytokine antibody complex
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Verstraete, K., Savvides, S.N.
2.298
X-RAY DIFFRACTION
0.215
0.189
false
true
IGHV3
IGLV3
Lambda
0
-13.945097
SPR
null
TBD
sabdab_dataset/5j13/abangle/5j13.abangle
sabdab_dataset/5j13/annotation/5j13_C_VH.ann
sabdab_dataset/5j13/annotation/5j13_B_VL.ann
sabdab_dataset/5j13/imgt/5j13_C_H.ann
sabdab_dataset/5j13/imgt/5j13_B_L.ann
sabdab_dataset/5j13/sequence/5j13_raw.pdb
sabdab_dataset/5j13/sequence/5j13_C_VH.fa
sabdab_dataset/5j13/sequence/5j13_B_VL.fa
sabdab_dataset/5j13/structure/5j13.pdb
sabdab_dataset/5j13/structure/chothia/5j13.pdb
true
false
train