pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 365
values | r_factor stringclasses 358
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values | abangle stringlengths 40 40 ⌀ | annotation_H stringlengths 44 44 ⌀ | annotation_L stringlengths 44 44 ⌀ | imgt_H stringlengths 37 37 ⌀ | imgt_L stringlengths 37 37 ⌀ | sequence_raw stringlengths 41 41 | sequence_H stringlengths 41 41 ⌀ | sequence_L stringlengths 41 41 ⌀ | structure stringlengths 38 38 | structure_chothia stringlengths 46 46 | in_nr_set bool 2
classes | curated_quality_dataset bool 2
classes | split stringclasses 3
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
5nuz | A | B | 0 | C | protein | null | pre-glycoprotein polyprotein gp complex | IMMUNE SYSTEM | 05/03/17 | Junin virus GP1 glycoprotein in complex with an antibody Fab fragment | MUS MUSCULUS; JUNIN MAMMARENAVIRUS | mus musculus | mus musculus | junin mammarenavirus | Zeltina, A., Krumm, S.A., Sahin, M., Struwe, W.B., Harlos, K., Nunberg, J.H., Crispin, M., Pinschewer, D.D., Doores, K.J., Bowden, T.A. | 1.85 | X-RAY DIFFRACTION | 0.210 | 0.185 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/5nuz/abangle/5nuz.abangle | sabdab_dataset/5nuz/annotation/5nuz_A_VH.ann | sabdab_dataset/5nuz/annotation/5nuz_B_VL.ann | sabdab_dataset/5nuz/imgt/5nuz_A_H.ann | sabdab_dataset/5nuz/imgt/5nuz_B_L.ann | sabdab_dataset/5nuz/sequence/5nuz_raw.pdb | sabdab_dataset/5nuz/sequence/5nuz_A_VH.fa | sabdab_dataset/5nuz/sequence/5nuz_B_VL.fa | sabdab_dataset/5nuz/structure/5nuz.pdb | sabdab_dataset/5nuz/structure/chothia/5nuz.pdb | true | false | train |
5nuz | H | L | 0 | D | protein | null | pre-glycoprotein polyprotein gp complex | IMMUNE SYSTEM | 05/03/17 | Junin virus GP1 glycoprotein in complex with an antibody Fab fragment | MUS MUSCULUS; JUNIN MAMMARENAVIRUS | mus musculus | mus musculus | junin mammarenavirus | Zeltina, A., Krumm, S.A., Sahin, M., Struwe, W.B., Harlos, K., Nunberg, J.H., Crispin, M., Pinschewer, D.D., Doores, K.J., Bowden, T.A. | 1.85 | X-RAY DIFFRACTION | 0.210 | 0.185 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/5nuz/abangle/5nuz.abangle | sabdab_dataset/5nuz/annotation/5nuz_H_VH.ann | sabdab_dataset/5nuz/annotation/5nuz_L_VL.ann | sabdab_dataset/5nuz/imgt/5nuz_H_H.ann | sabdab_dataset/5nuz/imgt/5nuz_L_L.ann | sabdab_dataset/5nuz/sequence/5nuz_raw.pdb | sabdab_dataset/5nuz/sequence/5nuz_H_VH.fa | sabdab_dataset/5nuz/sequence/5nuz_L_VL.fa | sabdab_dataset/5nuz/structure/5nuz.pdb | sabdab_dataset/5nuz/structure/chothia/5nuz.pdb | true | false | train |
5nyx | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/12/17 | human Fab fragment 5H2 against NHBA from Neisseria meningitidis | HOMO SAPIENS | homo sapiens | homo sapiens | null | Enrico, M., Maritan, M. | 1.88 | X-RAY DIFFRACTION | 0.226 | 0.186 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5nyx/abangle/5nyx.abangle | sabdab_dataset/5nyx/annotation/5nyx_H_VH.ann | sabdab_dataset/5nyx/annotation/5nyx_L_VL.ann | sabdab_dataset/5nyx/imgt/5nyx_H_H.ann | sabdab_dataset/5nyx/imgt/5nyx_L_L.ann | sabdab_dataset/5nyx/sequence/5nyx_raw.pdb | sabdab_dataset/5nyx/sequence/5nyx_H_VH.fa | sabdab_dataset/5nyx/sequence/5nyx_L_VL.fa | sabdab_dataset/5nyx/structure/5nyx.pdb | sabdab_dataset/5nyx/structure/chothia/5nyx.pdb | false | false | train |
5nyx | M | N | 0 | null | null | null | null | IMMUNE SYSTEM | 05/12/17 | human Fab fragment 5H2 against NHBA from Neisseria meningitidis | HOMO SAPIENS | homo sapiens | homo sapiens | null | Enrico, M., Maritan, M. | 1.88 | X-RAY DIFFRACTION | 0.226 | 0.186 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5nyx/abangle/5nyx.abangle | sabdab_dataset/5nyx/annotation/5nyx_M_VH.ann | sabdab_dataset/5nyx/annotation/5nyx_N_VL.ann | sabdab_dataset/5nyx/imgt/5nyx_M_H.ann | sabdab_dataset/5nyx/imgt/5nyx_N_L.ann | sabdab_dataset/5nyx/sequence/5nyx_raw.pdb | sabdab_dataset/5nyx/sequence/5nyx_M_VH.fa | sabdab_dataset/5nyx/sequence/5nyx_N_VL.fa | sabdab_dataset/5nyx/structure/5nyx.pdb | sabdab_dataset/5nyx/structure/chothia/5nyx.pdb | false | false | train |
5nyx | O | P | 0 | null | null | null | null | IMMUNE SYSTEM | 05/12/17 | human Fab fragment 5H2 against NHBA from Neisseria meningitidis | HOMO SAPIENS | homo sapiens | homo sapiens | null | Enrico, M., Maritan, M. | 1.88 | X-RAY DIFFRACTION | 0.226 | 0.186 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5nyx/abangle/5nyx.abangle | sabdab_dataset/5nyx/annotation/5nyx_O_VH.ann | sabdab_dataset/5nyx/annotation/5nyx_P_VL.ann | sabdab_dataset/5nyx/imgt/5nyx_O_H.ann | sabdab_dataset/5nyx/imgt/5nyx_P_L.ann | sabdab_dataset/5nyx/sequence/5nyx_raw.pdb | sabdab_dataset/5nyx/sequence/5nyx_O_VH.fa | sabdab_dataset/5nyx/sequence/5nyx_P_VL.fa | sabdab_dataset/5nyx/structure/5nyx.pdb | sabdab_dataset/5nyx/structure/chothia/5nyx.pdb | false | false | train |
5o02 | C | null | 0 | A | protein | null | capsid protein | VIRAL PROTEIN | 05/16/17 | GII.17 Kawasaki323 protruding domain in complex with Nanobody Nano-4 | NOROVIRUS 13-BH-1/2013/GII.17; VICUGNA PACOS | vicugna pacos | null | norovirus 13-bh-1/2013/gii.17 | Koromyslova, A.D., Hansman, G.S. | 1.72 | X-RAY DIFFRACTION | 0.181 | 0.150 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5o02/annotation/5o02_C_VH.ann | null | sabdab_dataset/5o02/imgt/5o02_C_H.ann | null | sabdab_dataset/5o02/sequence/5o02_raw.pdb | sabdab_dataset/5o02/sequence/5o02_C_VH.fa | null | sabdab_dataset/5o02/structure/5o02.pdb | sabdab_dataset/5o02/structure/chothia/5o02.pdb | true | true | train |
5o03 | C | null | 0 | A | protein | null | capsid protein | VIRAL PROTEIN | 05/16/17 | GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-32 | NORWALK VIRUS; NOROVIRUS | norovirus | null | norwalk virus | Koromyslova, A.D., Hansman, G.H. | 2.194 | X-RAY DIFFRACTION | 0.193 | 0.172 | false | true | IGHV1 | null | null | 0 | -9.852364 | ITC | null | TBD | null | sabdab_dataset/5o03/annotation/5o03_C_VH.ann | null | sabdab_dataset/5o03/imgt/5o03_C_H.ann | null | sabdab_dataset/5o03/sequence/5o03_raw.pdb | sabdab_dataset/5o03/sequence/5o03_C_VH.fa | null | sabdab_dataset/5o03/structure/5o03.pdb | sabdab_dataset/5o03/structure/chothia/5o03.pdb | true | true | validation |
5o03 | D | null | 0 | B | protein | null | capsid protein | VIRAL PROTEIN | 05/16/17 | GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-32 | NORWALK VIRUS; NOROVIRUS | norovirus | null | norwalk virus | Koromyslova, A.D., Hansman, G.H. | 2.194 | X-RAY DIFFRACTION | 0.193 | 0.172 | false | true | IGHV1 | null | null | 0 | -9.852364 | ITC | null | TBD | null | sabdab_dataset/5o03/annotation/5o03_D_VH.ann | null | sabdab_dataset/5o03/imgt/5o03_D_H.ann | null | sabdab_dataset/5o03/sequence/5o03_raw.pdb | sabdab_dataset/5o03/sequence/5o03_D_VH.fa | null | sabdab_dataset/5o03/structure/5o03.pdb | sabdab_dataset/5o03/structure/chothia/5o03.pdb | true | false | validation |
5o04 | C | null | 0 | A | protein | null | capsid protein | VIRAL PROTEIN | 05/16/17 | GII.10 Vietnam 026 norovirus protruding domain in complex with Nanobody Nano-26 and Nano-85 | NORWALK VIRUS; VICUGNA PACOS | vicugna pacos | null | norwalk virus | Koromyslova, A.D., Hansman, A.D. | 2.3 | X-RAY DIFFRACTION | 0.242 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5o04/annotation/5o04_C_VH.ann | null | sabdab_dataset/5o04/imgt/5o04_C_H.ann | null | sabdab_dataset/5o04/sequence/5o04_raw.pdb | sabdab_dataset/5o04/sequence/5o04_C_VH.fa | null | sabdab_dataset/5o04/structure/5o04.pdb | sabdab_dataset/5o04/structure/chothia/5o04.pdb | true | true | train |
5o04 | D | null | 0 | B | protein | null | capsid protein | VIRAL PROTEIN | 05/16/17 | GII.10 Vietnam 026 norovirus protruding domain in complex with Nanobody Nano-26 and Nano-85 | NORWALK VIRUS; VICUGNA PACOS | vicugna pacos | null | norwalk virus | Koromyslova, A.D., Hansman, A.D. | 2.3 | X-RAY DIFFRACTION | 0.242 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5o04/annotation/5o04_D_VH.ann | null | sabdab_dataset/5o04/imgt/5o04_D_H.ann | null | sabdab_dataset/5o04/sequence/5o04_raw.pdb | sabdab_dataset/5o04/sequence/5o04_D_VH.fa | null | sabdab_dataset/5o04/structure/5o04.pdb | sabdab_dataset/5o04/structure/chothia/5o04.pdb | true | false | train |
5o04 | E | null | 0 | B | protein | null | capsid protein | VIRAL PROTEIN | 05/16/17 | GII.10 Vietnam 026 norovirus protruding domain in complex with Nanobody Nano-26 and Nano-85 | NORWALK VIRUS; VICUGNA PACOS | vicugna pacos | null | norwalk virus | Koromyslova, A.D., Hansman, A.D. | 2.3 | X-RAY DIFFRACTION | 0.242 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5o04/annotation/5o04_E_VH.ann | null | sabdab_dataset/5o04/imgt/5o04_E_H.ann | null | sabdab_dataset/5o04/sequence/5o04_raw.pdb | sabdab_dataset/5o04/sequence/5o04_E_VH.fa | null | sabdab_dataset/5o04/structure/5o04.pdb | sabdab_dataset/5o04/structure/chothia/5o04.pdb | true | false | train |
5o04 | F | null | 0 | A | protein | null | capsid protein | VIRAL PROTEIN | 05/16/17 | GII.10 Vietnam 026 norovirus protruding domain in complex with Nanobody Nano-26 and Nano-85 | NORWALK VIRUS; VICUGNA PACOS | vicugna pacos | null | norwalk virus | Koromyslova, A.D., Hansman, A.D. | 2.3 | X-RAY DIFFRACTION | 0.242 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5o04/annotation/5o04_F_VH.ann | null | sabdab_dataset/5o04/imgt/5o04_F_H.ann | null | sabdab_dataset/5o04/sequence/5o04_raw.pdb | sabdab_dataset/5o04/sequence/5o04_F_VH.fa | null | sabdab_dataset/5o04/structure/5o04.pdb | sabdab_dataset/5o04/structure/chothia/5o04.pdb | true | false | train |
5o05 | C | null | 0 | B | protein | null | capsid protein | VIRAL PROTEIN | 05/16/17 | GII.10 Vietnam 026 norovirus protruding domain in complex with Nanobody Nano-42 | VICUGNA PACOS; NORWALK VIRUS | vicugna pacos | null | norwalk virus | Koromyslova, A.D., Hansman, G.S. | 2.0 | X-RAY DIFFRACTION | 0.222 | 0.180 | false | true | IGHV1 | null | null | 0 | -12.403046 | ITC | null | TBD | null | sabdab_dataset/5o05/annotation/5o05_C_VH.ann | null | sabdab_dataset/5o05/imgt/5o05_C_H.ann | null | sabdab_dataset/5o05/sequence/5o05_raw.pdb | sabdab_dataset/5o05/sequence/5o05_C_VH.fa | null | sabdab_dataset/5o05/structure/5o05.pdb | sabdab_dataset/5o05/structure/chothia/5o05.pdb | true | true | validation |
5o05 | D | null | 0 | A | protein | null | capsid protein | VIRAL PROTEIN | 05/16/17 | GII.10 Vietnam 026 norovirus protruding domain in complex with Nanobody Nano-42 | VICUGNA PACOS; NORWALK VIRUS | vicugna pacos | null | norwalk virus | Koromyslova, A.D., Hansman, G.S. | 2.0 | X-RAY DIFFRACTION | 0.222 | 0.180 | false | true | IGHV1 | null | null | 0 | -12.403046 | ITC | null | TBD | null | sabdab_dataset/5o05/annotation/5o05_D_VH.ann | null | sabdab_dataset/5o05/imgt/5o05_D_H.ann | null | sabdab_dataset/5o05/sequence/5o05_raw.pdb | sabdab_dataset/5o05/sequence/5o05_D_VH.fa | null | sabdab_dataset/5o05/structure/5o05.pdb | sabdab_dataset/5o05/structure/chothia/5o05.pdb | true | false | train |
5o0w | E | null | 0 | A | protein | null | fructose-bisphosphate aldolase | LYASE | 05/17/17 | Crystal structure of the complex between Nb474 and Trypanosoma congolense fructose-1,6-bisphosphate aldolase | TRYPANOSOMA CONGOLENSE (STRAIN IL3000); VICUGNA PACOS | vicugna pacos | null | trypanosoma congolense (strain il3000) | Pinto, J., Magez, S., Sterckx, Y. | 2.57 | X-RAY DIFFRACTION | 0.222 | 0.192 | false | true | IGHV1 | null | null | 0 | -13.822203 | SPR | null | TBD | null | sabdab_dataset/5o0w/annotation/5o0w_E_VH.ann | null | sabdab_dataset/5o0w/imgt/5o0w_E_H.ann | null | sabdab_dataset/5o0w/sequence/5o0w_raw.pdb | sabdab_dataset/5o0w/sequence/5o0w_E_VH.fa | null | sabdab_dataset/5o0w/structure/5o0w.pdb | sabdab_dataset/5o0w/structure/chothia/5o0w.pdb | false | false | train |
5o0w | F | null | 0 | B | protein | null | fructose-bisphosphate aldolase | LYASE | 05/17/17 | Crystal structure of the complex between Nb474 and Trypanosoma congolense fructose-1,6-bisphosphate aldolase | TRYPANOSOMA CONGOLENSE (STRAIN IL3000); VICUGNA PACOS | vicugna pacos | null | trypanosoma congolense (strain il3000) | Pinto, J., Magez, S., Sterckx, Y. | 2.57 | X-RAY DIFFRACTION | 0.222 | 0.192 | false | true | IGHV1 | null | null | 0 | -13.822203 | SPR | null | TBD | null | sabdab_dataset/5o0w/annotation/5o0w_F_VH.ann | null | sabdab_dataset/5o0w/imgt/5o0w_F_H.ann | null | sabdab_dataset/5o0w/sequence/5o0w_raw.pdb | sabdab_dataset/5o0w/sequence/5o0w_F_VH.fa | null | sabdab_dataset/5o0w/structure/5o0w.pdb | sabdab_dataset/5o0w/structure/chothia/5o0w.pdb | false | false | train |
5o0w | G | null | 0 | C | protein | null | fructose-bisphosphate aldolase | LYASE | 05/17/17 | Crystal structure of the complex between Nb474 and Trypanosoma congolense fructose-1,6-bisphosphate aldolase | TRYPANOSOMA CONGOLENSE (STRAIN IL3000); VICUGNA PACOS | vicugna pacos | null | trypanosoma congolense (strain il3000) | Pinto, J., Magez, S., Sterckx, Y. | 2.57 | X-RAY DIFFRACTION | 0.222 | 0.192 | false | true | IGHV1 | null | null | 0 | -13.822203 | SPR | null | TBD | null | sabdab_dataset/5o0w/annotation/5o0w_G_VH.ann | null | sabdab_dataset/5o0w/imgt/5o0w_G_H.ann | null | sabdab_dataset/5o0w/sequence/5o0w_raw.pdb | sabdab_dataset/5o0w/sequence/5o0w_G_VH.fa | null | sabdab_dataset/5o0w/structure/5o0w.pdb | sabdab_dataset/5o0w/structure/chothia/5o0w.pdb | false | false | validation |
5o0w | H | null | 0 | D | protein | null | fructose-bisphosphate aldolase | LYASE | 05/17/17 | Crystal structure of the complex between Nb474 and Trypanosoma congolense fructose-1,6-bisphosphate aldolase | TRYPANOSOMA CONGOLENSE (STRAIN IL3000); VICUGNA PACOS | vicugna pacos | null | trypanosoma congolense (strain il3000) | Pinto, J., Magez, S., Sterckx, Y. | 2.57 | X-RAY DIFFRACTION | 0.222 | 0.192 | false | true | IGHV1 | null | null | 0 | -13.822203 | SPR | null | TBD | null | sabdab_dataset/5o0w/annotation/5o0w_H_VH.ann | null | sabdab_dataset/5o0w/imgt/5o0w_H_H.ann | null | sabdab_dataset/5o0w/sequence/5o0w_raw.pdb | sabdab_dataset/5o0w/sequence/5o0w_H_VH.fa | null | sabdab_dataset/5o0w/structure/5o0w.pdb | sabdab_dataset/5o0w/structure/chothia/5o0w.pdb | false | false | train |
5o14 | C | D | 0 | B | protein | null | factor h binding protein variant 1.1 | IMMUNE SYSTEM | 05/18/17 | Co-crystal structure of a cross-reactive bactericidal human antibody targeting meningococcal vaccine antigen factor H binding protein | NEISSERIA MENINGITIDIS SEROGROUP B (STRAIN MC58); HOMO SAPIENS | homo sapiens | homo sapiens | neisseria meningitidis serogroup b (strainmc58) | Lopez-Sagaseta, J. | 2.195 | X-RAY DIFFRACTION | 0.250 | 0.192 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5o14/abangle/5o14.abangle | sabdab_dataset/5o14/annotation/5o14_C_VH.ann | sabdab_dataset/5o14/annotation/5o14_D_VL.ann | sabdab_dataset/5o14/imgt/5o14_C_H.ann | sabdab_dataset/5o14/imgt/5o14_D_L.ann | sabdab_dataset/5o14/sequence/5o14_raw.pdb | sabdab_dataset/5o14/sequence/5o14_C_VH.fa | sabdab_dataset/5o14/sequence/5o14_D_VL.fa | sabdab_dataset/5o14/structure/5o14.pdb | sabdab_dataset/5o14/structure/chothia/5o14.pdb | true | false | validation |
5o14 | H | L | 0 | A | protein | null | factor h binding protein variant 1.1 | IMMUNE SYSTEM | 05/18/17 | Co-crystal structure of a cross-reactive bactericidal human antibody targeting meningococcal vaccine antigen factor H binding protein | NEISSERIA MENINGITIDIS SEROGROUP B (STRAIN MC58); HOMO SAPIENS | homo sapiens | homo sapiens | neisseria meningitidis serogroup b (strainmc58) | Lopez-Sagaseta, J. | 2.195 | X-RAY DIFFRACTION | 0.250 | 0.192 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5o14/abangle/5o14.abangle | sabdab_dataset/5o14/annotation/5o14_H_VH.ann | sabdab_dataset/5o14/annotation/5o14_L_VL.ann | sabdab_dataset/5o14/imgt/5o14_H_H.ann | sabdab_dataset/5o14/imgt/5o14_L_L.ann | sabdab_dataset/5o14/sequence/5o14_raw.pdb | sabdab_dataset/5o14/sequence/5o14_H_VH.fa | sabdab_dataset/5o14/sequence/5o14_L_VL.fa | sabdab_dataset/5o14/structure/5o14.pdb | sabdab_dataset/5o14/structure/chothia/5o14.pdb | true | false | train |
5o1r | H | L | 0 | A | protein | null | gna2132 | IMMUNE SYSTEM | 05/19/17 | human Fab 5H2 bound to NHBA-C3 from Neisseria meningitidis serogroup B | NEISSERIA MENINGITIDIS; HOMO SAPIENS | homo sapiens | homo sapiens | neisseria meningitidis | Enrico, M., Maritan, M. | 2.86 | X-RAY DIFFRACTION | 0.222 | 0.178 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5o1r/abangle/5o1r.abangle | sabdab_dataset/5o1r/annotation/5o1r_H_VH.ann | sabdab_dataset/5o1r/annotation/5o1r_L_VL.ann | sabdab_dataset/5o1r/imgt/5o1r_H_H.ann | sabdab_dataset/5o1r/imgt/5o1r_L_L.ann | sabdab_dataset/5o1r/sequence/5o1r_raw.pdb | sabdab_dataset/5o1r/sequence/5o1r_H_VH.fa | sabdab_dataset/5o1r/sequence/5o1r_L_VL.fa | sabdab_dataset/5o1r/structure/5o1r.pdb | sabdab_dataset/5o1r/structure/chothia/5o1r.pdb | true | false | train |
5o1r | I | M | 0 | B | protein | null | gna2132 | IMMUNE SYSTEM | 05/19/17 | human Fab 5H2 bound to NHBA-C3 from Neisseria meningitidis serogroup B | NEISSERIA MENINGITIDIS; HOMO SAPIENS | homo sapiens | homo sapiens | neisseria meningitidis | Enrico, M., Maritan, M. | 2.86 | X-RAY DIFFRACTION | 0.222 | 0.178 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5o1r/abangle/5o1r.abangle | sabdab_dataset/5o1r/annotation/5o1r_I_VH.ann | sabdab_dataset/5o1r/annotation/5o1r_M_VL.ann | sabdab_dataset/5o1r/imgt/5o1r_I_H.ann | sabdab_dataset/5o1r/imgt/5o1r_M_L.ann | sabdab_dataset/5o1r/sequence/5o1r_raw.pdb | sabdab_dataset/5o1r/sequence/5o1r_I_VH.fa | sabdab_dataset/5o1r/sequence/5o1r_M_VL.fa | sabdab_dataset/5o1r/structure/5o1r.pdb | sabdab_dataset/5o1r/structure/chothia/5o1r.pdb | true | false | test |
5o2u | B | null | 0 | A | protein | null | capsid protein p24 | VIRUS | 05/22/17 | Llama VHH in complex with p24 | LAMA GLAMA; HUMAN IMMUNODEFICIENCY VIRUS 1 | lama glama | null | human immunodeficiency virus 1 | Caillat, C., Verrips, T., Weissenhorn, W. | 2.76 | X-RAY DIFFRACTION | 0.256 | 0.222 | false | true | IGHV1 | null | null | 0 | -12.498046 | SPR | null | TBD | null | sabdab_dataset/5o2u/annotation/5o2u_B_VH.ann | null | sabdab_dataset/5o2u/imgt/5o2u_B_H.ann | null | sabdab_dataset/5o2u/sequence/5o2u_raw.pdb | sabdab_dataset/5o2u/sequence/5o2u_B_VH.fa | null | sabdab_dataset/5o2u/structure/5o2u.pdb | sabdab_dataset/5o2u/structure/chothia/5o2u.pdb | true | true | train |
5o2u | D | null | 0 | C | protein | null | capsid protein p24 | VIRUS | 05/22/17 | Llama VHH in complex with p24 | LAMA GLAMA; HUMAN IMMUNODEFICIENCY VIRUS 1 | lama glama | null | human immunodeficiency virus 1 | Caillat, C., Verrips, T., Weissenhorn, W. | 2.76 | X-RAY DIFFRACTION | 0.256 | 0.222 | false | true | IGHV1 | null | null | 0 | -12.498046 | SPR | null | TBD | null | sabdab_dataset/5o2u/annotation/5o2u_D_VH.ann | null | sabdab_dataset/5o2u/imgt/5o2u_D_H.ann | null | sabdab_dataset/5o2u/sequence/5o2u_raw.pdb | sabdab_dataset/5o2u/sequence/5o2u_D_VH.fa | null | sabdab_dataset/5o2u/structure/5o2u.pdb | sabdab_dataset/5o2u/structure/chothia/5o2u.pdb | true | false | train |
5o4g | B | A | 0 | C | protein | null | receptor tyrosine-protein kinase erbb-2 | ONCOPROTEIN | 05/29/17 | HER2 in complex with Fab MF3958 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | De Nardis, C., Gros, P. | 3.0 | X-RAY DIFFRACTION | 0.271 | 0.229 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5o4g/abangle/5o4g.abangle | sabdab_dataset/5o4g/annotation/5o4g_B_VH.ann | sabdab_dataset/5o4g/annotation/5o4g_A_VL.ann | sabdab_dataset/5o4g/imgt/5o4g_B_H.ann | sabdab_dataset/5o4g/imgt/5o4g_A_L.ann | sabdab_dataset/5o4g/sequence/5o4g_raw.pdb | sabdab_dataset/5o4g/sequence/5o4g_B_VH.fa | sabdab_dataset/5o4g/sequence/5o4g_A_VL.fa | sabdab_dataset/5o4g/structure/5o4g.pdb | sabdab_dataset/5o4g/structure/chothia/5o4g.pdb | true | false | validation |
5o4o | B | A | 0 | C | protein | null | receptor tyrosine-protein kinase erbb-3 | IMMUNE SYSTEM | 05/30/17 | HER3 in complex with Fab MF3178 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | De Nardis, C., Gros, P. | 3.4 | X-RAY DIFFRACTION | 0.261 | 0.215 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5o4o/abangle/5o4o.abangle | sabdab_dataset/5o4o/annotation/5o4o_B_VH.ann | sabdab_dataset/5o4o/annotation/5o4o_A_VL.ann | sabdab_dataset/5o4o/imgt/5o4o_B_H.ann | sabdab_dataset/5o4o/imgt/5o4o_A_L.ann | sabdab_dataset/5o4o/sequence/5o4o_raw.pdb | sabdab_dataset/5o4o/sequence/5o4o_B_VH.fa | sabdab_dataset/5o4o/sequence/5o4o_A_VL.fa | sabdab_dataset/5o4o/structure/5o4o.pdb | sabdab_dataset/5o4o/structure/chothia/5o4o.pdb | false | false | train |
5o6v | H | L | 0 | B | protein | null | genome polyprotein | VIRUS | 06/07/17 | The cryo-EM structure of Tick-borne encephalitis virus complexed with Fab fragment of neutralizing antibody 19/1786 | TICK-BORNE ENCEPHALITIS VIRUS (STRAIN HYPR); MUS MUSCULUS | mus musculus | mus musculus | tick-borne encephalitis virus (strain hypr) | Fuzik, T., Plevka, P. | 3.9, 3.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV5 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/5o6v/abangle/5o6v.abangle | sabdab_dataset/5o6v/annotation/5o6v_H_VH.ann | sabdab_dataset/5o6v/annotation/5o6v_L_VL.ann | sabdab_dataset/5o6v/imgt/5o6v_H_H.ann | sabdab_dataset/5o6v/imgt/5o6v_L_L.ann | sabdab_dataset/5o6v/sequence/5o6v_raw.pdb | sabdab_dataset/5o6v/sequence/5o6v_H_VH.fa | sabdab_dataset/5o6v/sequence/5o6v_L_VL.fa | sabdab_dataset/5o6v/structure/5o6v.pdb | sabdab_dataset/5o6v/structure/chothia/5o6v.pdb | false | false | train |
5o6v | I | M | 0 | C | protein | null | genome polyprotein | VIRUS | 06/07/17 | The cryo-EM structure of Tick-borne encephalitis virus complexed with Fab fragment of neutralizing antibody 19/1786 | TICK-BORNE ENCEPHALITIS VIRUS (STRAIN HYPR); MUS MUSCULUS | mus musculus | mus musculus | tick-borne encephalitis virus (strain hypr) | Fuzik, T., Plevka, P. | 3.9, 3.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV5 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/5o6v/abangle/5o6v.abangle | sabdab_dataset/5o6v/annotation/5o6v_I_VH.ann | sabdab_dataset/5o6v/annotation/5o6v_M_VL.ann | sabdab_dataset/5o6v/imgt/5o6v_I_H.ann | sabdab_dataset/5o6v/imgt/5o6v_M_L.ann | sabdab_dataset/5o6v/sequence/5o6v_raw.pdb | sabdab_dataset/5o6v/sequence/5o6v_I_VH.fa | sabdab_dataset/5o6v/sequence/5o6v_M_VL.fa | sabdab_dataset/5o6v/structure/5o6v.pdb | sabdab_dataset/5o6v/structure/chothia/5o6v.pdb | false | false | validation |
5o7p | B | A | 0 | C | protein | null | receptor tyrosine-protein kinase erbb-3 | IMMUNE SYSTEM | 06/09/17 | HER3 in complex with Fab MF3178 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | De Nardis, C., Gros, P. | 4.5 | X-RAY DIFFRACTION | 0.296 | 0.247 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5o7p/abangle/5o7p.abangle | sabdab_dataset/5o7p/annotation/5o7p_B_VH.ann | sabdab_dataset/5o7p/annotation/5o7p_A_VL.ann | sabdab_dataset/5o7p/imgt/5o7p_B_H.ann | sabdab_dataset/5o7p/imgt/5o7p_A_L.ann | sabdab_dataset/5o7p/sequence/5o7p_raw.pdb | sabdab_dataset/5o7p/sequence/5o7p_B_VH.fa | sabdab_dataset/5o7p/sequence/5o7p_A_VL.fa | sabdab_dataset/5o7p/structure/5o7p.pdb | sabdab_dataset/5o7p/structure/chothia/5o7p.pdb | true | false | train |
5o8f | K | null | 0 | A | protein | null | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 06/13/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 and pregnanolone | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.2 | X-RAY DIFFRACTION | 0.242 | 0.232 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5o8f/annotation/5o8f_K_VH.ann | null | sabdab_dataset/5o8f/imgt/5o8f_K_H.ann | null | sabdab_dataset/5o8f/sequence/5o8f_raw.pdb | sabdab_dataset/5o8f/sequence/5o8f_K_VH.fa | null | sabdab_dataset/5o8f/structure/5o8f.pdb | sabdab_dataset/5o8f/structure/chothia/5o8f.pdb | false | false | train |
5o8f | L | null | 0 | B | protein | null | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 06/13/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 and pregnanolone | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.2 | X-RAY DIFFRACTION | 0.242 | 0.232 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5o8f/annotation/5o8f_L_VH.ann | null | sabdab_dataset/5o8f/imgt/5o8f_L_H.ann | null | sabdab_dataset/5o8f/sequence/5o8f_raw.pdb | sabdab_dataset/5o8f/sequence/5o8f_L_VH.fa | null | sabdab_dataset/5o8f/structure/5o8f.pdb | sabdab_dataset/5o8f/structure/chothia/5o8f.pdb | false | false | train |
5o8f | M | null | 0 | C | protein | null | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 06/13/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 and pregnanolone | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.2 | X-RAY DIFFRACTION | 0.242 | 0.232 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5o8f/annotation/5o8f_M_VH.ann | null | sabdab_dataset/5o8f/imgt/5o8f_M_H.ann | null | sabdab_dataset/5o8f/sequence/5o8f_raw.pdb | sabdab_dataset/5o8f/sequence/5o8f_M_VH.fa | null | sabdab_dataset/5o8f/structure/5o8f.pdb | sabdab_dataset/5o8f/structure/chothia/5o8f.pdb | false | false | train |
5o8f | N | null | 0 | I | D | carbohydrate | protein | NAG | NA | N-ACETYL-D-GLUCOSAMINE | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 06/13/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 and pregnanolone | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.2 | X-RAY DIFFRACTION | 0.242 | 0.232 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5o8f/annotation/5o8f_N_VH.ann | null | sabdab_dataset/5o8f/imgt/5o8f_N_H.ann | null | sabdab_dataset/5o8f/sequence/5o8f_raw.pdb | sabdab_dataset/5o8f/sequence/5o8f_N_VH.fa | null | sabdab_dataset/5o8f/structure/5o8f.pdb | sabdab_dataset/5o8f/structure/chothia/5o8f.pdb | false | false | validation |
5o8f | O | null | 0 | A | E | protein | protein | NA | NA | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5,gamma-aminobutyric acid receptor subunit alpha-5 | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 06/13/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 and pregnanolone | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.2 | X-RAY DIFFRACTION | 0.242 | 0.232 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5o8f/annotation/5o8f_O_VH.ann | null | sabdab_dataset/5o8f/imgt/5o8f_O_H.ann | null | sabdab_dataset/5o8f/sequence/5o8f_raw.pdb | sabdab_dataset/5o8f/sequence/5o8f_O_VH.fa | null | sabdab_dataset/5o8f/structure/5o8f.pdb | sabdab_dataset/5o8f/structure/chothia/5o8f.pdb | false | false | train |
5ob5 | H | L | 0 | A | protein | null | c-x-c motif chemokine 2 | IMMUNE SYSTEM | 06/26/17 | fAb complex with GroBeta. AbVance: increasing our knowledge of antibody structural space to enable faster and better decision-making in antibody drug discovery. | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Zhao, B., Ward, P., Convery, M.A. | 1.65 | X-RAY DIFFRACTION | 0.195 | 0.168 | false | true | IGHV1 | IGKV14 | Kappa | null | null | null | null | null | sabdab_dataset/5ob5/abangle/5ob5.abangle | sabdab_dataset/5ob5/annotation/5ob5_H_VH.ann | sabdab_dataset/5ob5/annotation/5ob5_L_VL.ann | sabdab_dataset/5ob5/imgt/5ob5_H_H.ann | sabdab_dataset/5ob5/imgt/5ob5_L_L.ann | sabdab_dataset/5ob5/sequence/5ob5_raw.pdb | sabdab_dataset/5ob5/sequence/5ob5_H_VH.fa | sabdab_dataset/5ob5/sequence/5ob5_L_VL.fa | sabdab_dataset/5ob5/structure/5ob5.pdb | sabdab_dataset/5ob5/structure/chothia/5ob5.pdb | true | false | train |
5obf | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/26/17 | fAb. AbVance: increasing our knowledge of antibody structural space to enable faster and better decision-making in antibody drug discovery. | MUS MUSCULUS | mus musculus | mus musculus | null | Vicentini, G., Convery, M.A. | 1.92 | X-RAY DIFFRACTION | 0.210 | 0.174 | false | true | IGHV14 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/5obf/abangle/5obf.abangle | sabdab_dataset/5obf/annotation/5obf_H_VH.ann | sabdab_dataset/5obf/annotation/5obf_L_VL.ann | sabdab_dataset/5obf/imgt/5obf_H_H.ann | sabdab_dataset/5obf/imgt/5obf_L_L.ann | sabdab_dataset/5obf/sequence/5obf_raw.pdb | sabdab_dataset/5obf/sequence/5obf_H_VH.fa | sabdab_dataset/5obf/sequence/5obf_L_VL.fa | sabdab_dataset/5obf/structure/5obf.pdb | sabdab_dataset/5obf/structure/chothia/5obf.pdb | true | false | test |
5oca | H | L | 0 | B | A | protein | protein | NA | NA | proprotein convertase subtilisin/kexin type 9 | proprotein convertase subtilisin/kexin type 9 | HYDROLASE | 06/30/17 | PCSK9:Fab Complex with Dextran Sulfate | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Thirup, S.S., Vilstrup, J.P. | 2.3 | X-RAY DIFFRACTION | 0.195 | 0.167 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/5oca/abangle/5oca.abangle | sabdab_dataset/5oca/annotation/5oca_H_VH.ann | sabdab_dataset/5oca/annotation/5oca_L_VL.ann | sabdab_dataset/5oca/imgt/5oca_H_H.ann | sabdab_dataset/5oca/imgt/5oca_L_L.ann | sabdab_dataset/5oca/sequence/5oca_raw.pdb | sabdab_dataset/5oca/sequence/5oca_H_VH.fa | sabdab_dataset/5oca/sequence/5oca_L_VL.fa | sabdab_dataset/5oca/structure/5oca.pdb | sabdab_dataset/5oca/structure/chothia/5oca.pdb | false | false | train |
5occ | H | L | 0 | A | protein | null | low affinity immunoglobulin gamma fc region receptor ii-b | IMMUNE SYSTEM | 06/30/17 | Crystal structure of CD32b (Fc Gamma Receptor IIb) in complex with Human IgG1 Fab fragment (6G08) | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Tews, I., Orr, C. | 2.5 | X-RAY DIFFRACTION | 0.261 | 0.192 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/5occ/abangle/5occ.abangle | sabdab_dataset/5occ/annotation/5occ_H_VH.ann | sabdab_dataset/5occ/annotation/5occ_L_VL.ann | sabdab_dataset/5occ/imgt/5occ_H_H.ann | sabdab_dataset/5occ/imgt/5occ_L_L.ann | sabdab_dataset/5occ/sequence/5occ_raw.pdb | sabdab_dataset/5occ/sequence/5occ_H_VH.fa | sabdab_dataset/5occ/sequence/5occ_L_VL.fa | sabdab_dataset/5occ/structure/5occ.pdb | sabdab_dataset/5occ/structure/chothia/5occ.pdb | true | false | train |
5ock | H | L | 0 | A | peptide | null | cep1 peptide (from enolase) | IMMUNE SYSTEM | 07/03/17 | Crystal structure of ACPA E4 in complex with CEP1 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Dobritzsch, D., Ge, C., Holmdahl, R. | 1.6 | X-RAY DIFFRACTION | 0.218 | 0.183 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/5ock/abangle/5ock.abangle | sabdab_dataset/5ock/annotation/5ock_H_VH.ann | sabdab_dataset/5ock/annotation/5ock_L_VL.ann | sabdab_dataset/5ock/imgt/5ock_H_H.ann | sabdab_dataset/5ock/imgt/5ock_L_L.ann | sabdab_dataset/5ock/sequence/5ock_raw.pdb | sabdab_dataset/5ock/sequence/5ock_H_VH.fa | sabdab_dataset/5ock/sequence/5ock_L_VL.fa | sabdab_dataset/5ock/structure/5ock.pdb | sabdab_dataset/5ock/structure/chothia/5ock.pdb | false | false | train |
5ocl | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/03/17 | Nanobody-anti-VGLUT nanobody complex | VICUGNA PACOS; LAMA GLAMA | vicugna pacos | null | null | Dutzler, R., Schenck, S., Kunz, L. | 2.2 | X-RAY DIFFRACTION | 0.208 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ocl/annotation/5ocl_A_VH.ann | null | sabdab_dataset/5ocl/imgt/5ocl_A_H.ann | null | sabdab_dataset/5ocl/sequence/5ocl_raw.pdb | sabdab_dataset/5ocl/sequence/5ocl_A_VH.fa | null | sabdab_dataset/5ocl/structure/5ocl.pdb | sabdab_dataset/5ocl/structure/chothia/5ocl.pdb | true | false | train |
5ocl | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/03/17 | Nanobody-anti-VGLUT nanobody complex | VICUGNA PACOS; LAMA GLAMA | lama glama | null | null | Dutzler, R., Schenck, S., Kunz, L. | 2.2 | X-RAY DIFFRACTION | 0.208 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ocl/annotation/5ocl_B_VH.ann | null | sabdab_dataset/5ocl/imgt/5ocl_B_H.ann | null | sabdab_dataset/5ocl/sequence/5ocl_raw.pdb | sabdab_dataset/5ocl/sequence/5ocl_B_VH.fa | null | sabdab_dataset/5ocl/structure/5ocl.pdb | sabdab_dataset/5ocl/structure/chothia/5ocl.pdb | true | false | train |
5ocl | C | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/03/17 | Nanobody-anti-VGLUT nanobody complex | VICUGNA PACOS; LAMA GLAMA | vicugna pacos | null | null | Dutzler, R., Schenck, S., Kunz, L. | 2.2 | X-RAY DIFFRACTION | 0.208 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ocl/annotation/5ocl_C_VH.ann | null | sabdab_dataset/5ocl/imgt/5ocl_C_H.ann | null | sabdab_dataset/5ocl/sequence/5ocl_raw.pdb | sabdab_dataset/5ocl/sequence/5ocl_C_VH.fa | null | sabdab_dataset/5ocl/structure/5ocl.pdb | sabdab_dataset/5ocl/structure/chothia/5ocl.pdb | true | false | train |
5ocl | D | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/03/17 | Nanobody-anti-VGLUT nanobody complex | VICUGNA PACOS; LAMA GLAMA | lama glama | null | null | Dutzler, R., Schenck, S., Kunz, L. | 2.2 | X-RAY DIFFRACTION | 0.208 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ocl/annotation/5ocl_D_VH.ann | null | sabdab_dataset/5ocl/imgt/5ocl_D_H.ann | null | sabdab_dataset/5ocl/sequence/5ocl_raw.pdb | sabdab_dataset/5ocl/sequence/5ocl_D_VH.fa | null | sabdab_dataset/5ocl/structure/5ocl.pdb | sabdab_dataset/5ocl/structure/chothia/5ocl.pdb | true | false | train |
5ocl | E | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/03/17 | Nanobody-anti-VGLUT nanobody complex | VICUGNA PACOS; LAMA GLAMA | lama glama | null | null | Dutzler, R., Schenck, S., Kunz, L. | 2.2 | X-RAY DIFFRACTION | 0.208 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ocl/annotation/5ocl_E_VH.ann | null | sabdab_dataset/5ocl/imgt/5ocl_E_H.ann | null | sabdab_dataset/5ocl/sequence/5ocl_raw.pdb | sabdab_dataset/5ocl/sequence/5ocl_E_VH.fa | null | sabdab_dataset/5ocl/structure/5ocl.pdb | sabdab_dataset/5ocl/structure/chothia/5ocl.pdb | true | false | validation |
5ocl | F | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/03/17 | Nanobody-anti-VGLUT nanobody complex | VICUGNA PACOS; LAMA GLAMA | vicugna pacos | null | null | Dutzler, R., Schenck, S., Kunz, L. | 2.2 | X-RAY DIFFRACTION | 0.208 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ocl/annotation/5ocl_F_VH.ann | null | sabdab_dataset/5ocl/imgt/5ocl_F_H.ann | null | sabdab_dataset/5ocl/sequence/5ocl_raw.pdb | sabdab_dataset/5ocl/sequence/5ocl_F_VH.fa | null | sabdab_dataset/5ocl/structure/5ocl.pdb | sabdab_dataset/5ocl/structure/chothia/5ocl.pdb | true | false | validation |
5ocl | G | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/03/17 | Nanobody-anti-VGLUT nanobody complex | VICUGNA PACOS; LAMA GLAMA | lama glama | null | null | Dutzler, R., Schenck, S., Kunz, L. | 2.2 | X-RAY DIFFRACTION | 0.208 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ocl/annotation/5ocl_G_VH.ann | null | sabdab_dataset/5ocl/imgt/5ocl_G_H.ann | null | sabdab_dataset/5ocl/sequence/5ocl_raw.pdb | sabdab_dataset/5ocl/sequence/5ocl_G_VH.fa | null | sabdab_dataset/5ocl/structure/5ocl.pdb | sabdab_dataset/5ocl/structure/chothia/5ocl.pdb | true | false | train |
5ocl | H | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/03/17 | Nanobody-anti-VGLUT nanobody complex | VICUGNA PACOS; LAMA GLAMA | vicugna pacos | null | null | Dutzler, R., Schenck, S., Kunz, L. | 2.2 | X-RAY DIFFRACTION | 0.208 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ocl/annotation/5ocl_H_VH.ann | null | sabdab_dataset/5ocl/imgt/5ocl_H_H.ann | null | sabdab_dataset/5ocl/sequence/5ocl_raw.pdb | sabdab_dataset/5ocl/sequence/5ocl_H_VH.fa | null | sabdab_dataset/5ocl/structure/5ocl.pdb | sabdab_dataset/5ocl/structure/chothia/5ocl.pdb | true | false | train |
5ocx | H | L | 0 | A | peptide | null | cii-c-13-cit | IMMUNE SYSTEM | 07/04/17 | Crystal structure of ACPA E4 in complex with CII-C-13-CIT | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Dobritzsch, D., Ge, C., Holmdahl, R. | 1.75 | X-RAY DIFFRACTION | 0.212 | 0.176 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/5ocx/abangle/5ocx.abangle | sabdab_dataset/5ocx/annotation/5ocx_H_VH.ann | sabdab_dataset/5ocx/annotation/5ocx_L_VL.ann | sabdab_dataset/5ocx/imgt/5ocx_H_H.ann | sabdab_dataset/5ocx/imgt/5ocx_L_L.ann | sabdab_dataset/5ocx/sequence/5ocx_raw.pdb | sabdab_dataset/5ocx/sequence/5ocx_H_VH.fa | sabdab_dataset/5ocx/sequence/5ocx_L_VL.fa | sabdab_dataset/5ocx/structure/5ocx.pdb | sabdab_dataset/5ocx/structure/chothia/5ocx.pdb | false | false | train |
5ocy | H | L | 0 | C | peptide | null | cii-c-48-cit | IMMUNE SYSTEM | 07/04/17 | Crystal structure of ACPA E4 in complex with CII-C-48-CIT | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Dobritzsch, D., Ge, C., Holmdahl, R. | 2.6 | X-RAY DIFFRACTION | 0.245 | 0.187 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/5ocy/abangle/5ocy.abangle | sabdab_dataset/5ocy/annotation/5ocy_H_VH.ann | sabdab_dataset/5ocy/annotation/5ocy_L_VL.ann | sabdab_dataset/5ocy/imgt/5ocy_H_H.ann | sabdab_dataset/5ocy/imgt/5ocy_L_L.ann | sabdab_dataset/5ocy/sequence/5ocy_raw.pdb | sabdab_dataset/5ocy/sequence/5ocy_H_VH.fa | sabdab_dataset/5ocy/sequence/5ocy_L_VL.fa | sabdab_dataset/5ocy/structure/5ocy.pdb | sabdab_dataset/5ocy/structure/chothia/5ocy.pdb | false | false | test |
5od0 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/04/17 | Crystal structure of ACPA E4 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Dobritzsch, D., Ge, C., Holmdahl, R. | 1.8 | X-RAY DIFFRACTION | 0.213 | 0.170 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/5od0/abangle/5od0.abangle | sabdab_dataset/5od0/annotation/5od0_H_VH.ann | sabdab_dataset/5od0/annotation/5od0_L_VL.ann | sabdab_dataset/5od0/imgt/5od0_H_H.ann | sabdab_dataset/5od0/imgt/5od0_L_L.ann | sabdab_dataset/5od0/sequence/5od0_raw.pdb | sabdab_dataset/5od0/sequence/5od0_H_VH.fa | sabdab_dataset/5od0/sequence/5od0_L_VL.fa | sabdab_dataset/5od0/structure/5od0.pdb | sabdab_dataset/5od0/structure/chothia/5od0.pdb | true | false | test |
5od8 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 07/05/17 | Crystal structure of the RA-associated mAb B2 (Fab fragment) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Dobritzsch, D., Ge, C., Holmdahl, R., Amara, K., Malmstrom, V. | 2.2 | X-RAY DIFFRACTION | 0.243 | 0.200 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5od8/abangle/5od8.abangle | sabdab_dataset/5od8/annotation/5od8_A_VH.ann | sabdab_dataset/5od8/annotation/5od8_B_VL.ann | sabdab_dataset/5od8/imgt/5od8_A_H.ann | sabdab_dataset/5od8/imgt/5od8_B_L.ann | sabdab_dataset/5od8/sequence/5od8_raw.pdb | sabdab_dataset/5od8/sequence/5od8_A_VH.fa | sabdab_dataset/5od8/sequence/5od8_B_VL.fa | sabdab_dataset/5od8/structure/5od8.pdb | sabdab_dataset/5od8/structure/chothia/5od8.pdb | true | false | train |
5odb | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 07/05/17 | Crystal structure of the RA-associated mAb D10 (chimeric Fab fragment) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Dobritzsch, D., Ge, C., Holmdahl, R., Amara, K., Malmstrom, V. | 1.53 | X-RAY DIFFRACTION | 0.214 | 0.188 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/5odb/abangle/5odb.abangle | sabdab_dataset/5odb/annotation/5odb_A_VH.ann | sabdab_dataset/5odb/annotation/5odb_B_VL.ann | sabdab_dataset/5odb/imgt/5odb_A_H.ann | sabdab_dataset/5odb/imgt/5odb_B_L.ann | sabdab_dataset/5odb/sequence/5odb_raw.pdb | sabdab_dataset/5odb/sequence/5odb_A_VH.fa | sabdab_dataset/5odb/sequence/5odb_B_VL.fa | sabdab_dataset/5odb/structure/5odb.pdb | sabdab_dataset/5odb/structure/chothia/5odb.pdb | false | false | train |
5ogi | B | b | 0 | A | protein | null | hexon protein | VIRAL PROTEIN | 07/13/17 | Complex of a binding protein and human adenovirus C 5 hexon | MUS MUSCULUS; HUMAN ADENOVIRUS C SEROTYPE 5 | mus musculus | null | human adenovirus c serotype 5 | Schmid, M., Ernst, P., Honegger, A., Suomalainen, M., Zimmermann, M., Braun, L., Stauffer, S., Thom, C., Dreier, B., Eibauer, M., Kipar, A., Vogel, V., Greber, U.F., Medalia, O., Plueckthun, A. | 2.8 | X-RAY DIFFRACTION | 0.235 | 0.198 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/5ogi/abangle/5ogi.abangle | sabdab_dataset/5ogi/annotation/5ogi_B_VH.ann | sabdab_dataset/5ogi/annotation/5ogi_B_VL.ann | sabdab_dataset/5ogi/imgt/5ogi_B_H.ann | sabdab_dataset/5ogi/imgt/5ogi_B_L.ann | sabdab_dataset/5ogi/sequence/5ogi_raw.pdb | sabdab_dataset/5ogi/sequence/5ogi_B_VH.fa | sabdab_dataset/5ogi/sequence/5ogi_B_VL.fa | sabdab_dataset/5ogi/structure/5ogi.pdb | sabdab_dataset/5ogi/structure/chothia/5ogi.pdb | true | true | train |
5ojm | K | null | 0 | A | protein | null | human gabaa receptor chimera beta3-alpha5,gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 07/21/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 | SYNTHETIC CONSTRUCT; HOMO SAPIENS; LAMA GLAMA | lama glama | null | synthetic construct, homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.3 | X-RAY DIFFRACTION | 0.250 | 0.234 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ojm/annotation/5ojm_K_VH.ann | null | sabdab_dataset/5ojm/imgt/5ojm_K_H.ann | null | sabdab_dataset/5ojm/sequence/5ojm_raw.pdb | sabdab_dataset/5ojm/sequence/5ojm_K_VH.fa | null | sabdab_dataset/5ojm/structure/5ojm.pdb | sabdab_dataset/5ojm/structure/chothia/5ojm.pdb | true | true | test |
5ojm | L | null | 0 | B | protein | null | human gabaa receptor chimera beta3-alpha5,gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 07/21/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 | SYNTHETIC CONSTRUCT; HOMO SAPIENS; LAMA GLAMA | lama glama | null | synthetic construct, homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.3 | X-RAY DIFFRACTION | 0.250 | 0.234 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ojm/annotation/5ojm_L_VH.ann | null | sabdab_dataset/5ojm/imgt/5ojm_L_H.ann | null | sabdab_dataset/5ojm/sequence/5ojm_raw.pdb | sabdab_dataset/5ojm/sequence/5ojm_L_VH.fa | null | sabdab_dataset/5ojm/structure/5ojm.pdb | sabdab_dataset/5ojm/structure/chothia/5ojm.pdb | true | false | train |
5ojm | M | null | 0 | C | protein | null | human gabaa receptor chimera beta3-alpha5,gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 07/21/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 | SYNTHETIC CONSTRUCT; HOMO SAPIENS; LAMA GLAMA | lama glama | null | synthetic construct, homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.3 | X-RAY DIFFRACTION | 0.250 | 0.234 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ojm/annotation/5ojm_M_VH.ann | null | sabdab_dataset/5ojm/imgt/5ojm_M_H.ann | null | sabdab_dataset/5ojm/sequence/5ojm_raw.pdb | sabdab_dataset/5ojm/sequence/5ojm_M_VH.fa | null | sabdab_dataset/5ojm/structure/5ojm.pdb | sabdab_dataset/5ojm/structure/chothia/5ojm.pdb | true | false | train |
5ojm | N | null | 0 | D | protein | null | human gabaa receptor chimera beta3-alpha5,gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 07/21/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 | SYNTHETIC CONSTRUCT; HOMO SAPIENS; LAMA GLAMA | lama glama | null | synthetic construct, homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.3 | X-RAY DIFFRACTION | 0.250 | 0.234 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ojm/annotation/5ojm_N_VH.ann | null | sabdab_dataset/5ojm/imgt/5ojm_N_H.ann | null | sabdab_dataset/5ojm/sequence/5ojm_raw.pdb | sabdab_dataset/5ojm/sequence/5ojm_N_VH.fa | null | sabdab_dataset/5ojm/structure/5ojm.pdb | sabdab_dataset/5ojm/structure/chothia/5ojm.pdb | true | false | train |
5ojm | O | null | 0 | E | protein | null | human gabaa receptor chimera beta3-alpha5,gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 07/21/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 | SYNTHETIC CONSTRUCT; HOMO SAPIENS; LAMA GLAMA | lama glama | null | synthetic construct, homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.3 | X-RAY DIFFRACTION | 0.250 | 0.234 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ojm/annotation/5ojm_O_VH.ann | null | sabdab_dataset/5ojm/imgt/5ojm_O_H.ann | null | sabdab_dataset/5ojm/sequence/5ojm_raw.pdb | sabdab_dataset/5ojm/sequence/5ojm_O_VH.fa | null | sabdab_dataset/5ojm/structure/5ojm.pdb | sabdab_dataset/5ojm/structure/chothia/5ojm.pdb | true | false | train |
5omm | C | null | 0 | A | B | protein | protein | NA | NA | capsid protein | capsid protein | VIRAL PROTEIN | 10/04/17 | GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-14 | Norovirus GII.10; Vicugna pacos | vicugna pacos | null | norovirus gii.10 | norovirus gii.10 | Koromyslova, A.D., Hansman, G.S. | 1.7 | X-RAY DIFFRACTION | 0.193 | 0.166 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5omm/annotation/5omm_C_VH.ann | null | sabdab_dataset/5omm/imgt/5omm_C_H.ann | null | sabdab_dataset/5omm/sequence/5omm_raw.pdb | sabdab_dataset/5omm/sequence/5omm_C_VH.fa | null | sabdab_dataset/5omm/structure/5omm.pdb | sabdab_dataset/5omm/structure/chothia/5omm.pdb | true | true | train |
5omn | C | null | 0 | B | protein | null | capsid protein | VIRAL PROTEIN | 08/01/17 | GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-27 | NORWALK VIRUS; VICUGNA PACOS | vicugna pacos | null | norwalk virus | Koromyslova, A.D., Hansman, G.S. | 2.682 | X-RAY DIFFRACTION | 0.263 | 0.235 | false | true | IGHV1 | null | null | 0 | -10.944343 | ITC | null | TBD | null | sabdab_dataset/5omn/annotation/5omn_C_VH.ann | null | sabdab_dataset/5omn/imgt/5omn_C_H.ann | null | sabdab_dataset/5omn/sequence/5omn_raw.pdb | sabdab_dataset/5omn/sequence/5omn_C_VH.fa | null | sabdab_dataset/5omn/structure/5omn.pdb | sabdab_dataset/5omn/structure/chothia/5omn.pdb | true | true | train |
5opy | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/10/17 | Crystal structure of anti-alphaVbeta3 integrin Fab LM609 | MUS MUSCULUS | mus musculus | mus musculus | null | Backovic, M., Veesler, D., Borst, A.J., James, Z.M., Zagotta, W., Ginsberg, M., Rey, F.A., DiMaio, F. | 2.26 | X-RAY DIFFRACTION | 0.255 | 0.213 | false | true | IGHV5 | IGKV5 | Kappa | null | null | null | null | null | sabdab_dataset/5opy/abangle/5opy.abangle | sabdab_dataset/5opy/annotation/5opy_H_VH.ann | sabdab_dataset/5opy/annotation/5opy_L_VL.ann | sabdab_dataset/5opy/imgt/5opy_H_H.ann | sabdab_dataset/5opy/imgt/5opy_L_L.ann | sabdab_dataset/5opy/sequence/5opy_raw.pdb | sabdab_dataset/5opy/sequence/5opy_H_VH.fa | sabdab_dataset/5opy/sequence/5opy_L_VL.fa | sabdab_dataset/5opy/structure/5opy.pdb | sabdab_dataset/5opy/structure/chothia/5opy.pdb | true | false | train |
5otj | B | A | 0 | D | protein | null | polcalcin phl p 7 | IMMUNE SYSTEM | 08/22/17 | Monomeric polcalcin (Phl p 7) in complex with two identical allergen-specific antibodies | HOMO SAPIENS; PHLEUM PRATENSE | homo sapiens | homo sapiens | phleum pratense | Mitropoulou, A.N., Davies, A.M., Beavil, A.J., McDonnell, J.M., Sutton, B.J. | 2.35 | X-RAY DIFFRACTION | 0.235 | 0.199 | false | true | IGHV1 | IGLV1 | Lambda | 0 | -13.328052 | SPR | null | TBD | sabdab_dataset/5otj/abangle/5otj.abangle | sabdab_dataset/5otj/annotation/5otj_B_VH.ann | sabdab_dataset/5otj/annotation/5otj_A_VL.ann | sabdab_dataset/5otj/imgt/5otj_B_H.ann | sabdab_dataset/5otj/imgt/5otj_A_L.ann | sabdab_dataset/5otj/sequence/5otj_raw.pdb | sabdab_dataset/5otj/sequence/5otj_B_VH.fa | sabdab_dataset/5otj/sequence/5otj_A_VL.fa | sabdab_dataset/5otj/structure/5otj.pdb | sabdab_dataset/5otj/structure/chothia/5otj.pdb | true | false | test |
5otj | H | L | 0 | C | protein | null | polcalcin phl p 7 | IMMUNE SYSTEM | 08/22/17 | Monomeric polcalcin (Phl p 7) in complex with two identical allergen-specific antibodies | HOMO SAPIENS; PHLEUM PRATENSE | homo sapiens | homo sapiens | phleum pratense | Mitropoulou, A.N., Davies, A.M., Beavil, A.J., McDonnell, J.M., Sutton, B.J. | 2.35 | X-RAY DIFFRACTION | 0.235 | 0.199 | false | true | IGHV1 | IGLV1 | Lambda | 0 | -13.328052 | SPR | null | TBD | sabdab_dataset/5otj/abangle/5otj.abangle | sabdab_dataset/5otj/annotation/5otj_H_VH.ann | sabdab_dataset/5otj/annotation/5otj_L_VL.ann | sabdab_dataset/5otj/imgt/5otj_H_H.ann | sabdab_dataset/5otj/imgt/5otj_L_L.ann | sabdab_dataset/5otj/sequence/5otj_raw.pdb | sabdab_dataset/5otj/sequence/5otj_H_VH.fa | sabdab_dataset/5otj/sequence/5otj_L_VL.fa | sabdab_dataset/5otj/structure/5otj.pdb | sabdab_dataset/5otj/structure/chothia/5otj.pdb | true | false | validation |
5ovw | G | null | 0 | C | protein | null | vitamin b12-binding protein | TRANSPORT PROTEIN | 08/30/17 | Nanobody-bound BtuF, the vitamin B12 binding protein in Escherichia coli | ESCHERICHIA COLI; LAMA GLAMA | lama glama | null | escherichia coli | Mireku, S.A., Sauer, M.M., Glockshuber, R., Locher, K.P. | 2.653 | X-RAY DIFFRACTION | 0.259 | 0.223 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ovw/annotation/5ovw_G_VH.ann | null | sabdab_dataset/5ovw/imgt/5ovw_G_H.ann | null | sabdab_dataset/5ovw/sequence/5ovw_raw.pdb | sabdab_dataset/5ovw/sequence/5ovw_G_VH.fa | null | sabdab_dataset/5ovw/structure/5ovw.pdb | sabdab_dataset/5ovw/structure/chothia/5ovw.pdb | true | true | train |
5ovw | H | null | 0 | A | protein | null | vitamin b12-binding protein | TRANSPORT PROTEIN | 08/30/17 | Nanobody-bound BtuF, the vitamin B12 binding protein in Escherichia coli | ESCHERICHIA COLI; LAMA GLAMA | lama glama | null | escherichia coli | Mireku, S.A., Sauer, M.M., Glockshuber, R., Locher, K.P. | 2.653 | X-RAY DIFFRACTION | 0.259 | 0.223 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ovw/annotation/5ovw_H_VH.ann | null | sabdab_dataset/5ovw/imgt/5ovw_H_H.ann | null | sabdab_dataset/5ovw/sequence/5ovw_raw.pdb | sabdab_dataset/5ovw/sequence/5ovw_H_VH.fa | null | sabdab_dataset/5ovw/structure/5ovw.pdb | sabdab_dataset/5ovw/structure/chothia/5ovw.pdb | true | false | train |
5ovw | I | null | 0 | B | protein | null | vitamin b12-binding protein | TRANSPORT PROTEIN | 08/30/17 | Nanobody-bound BtuF, the vitamin B12 binding protein in Escherichia coli | ESCHERICHIA COLI; LAMA GLAMA | lama glama | null | escherichia coli | Mireku, S.A., Sauer, M.M., Glockshuber, R., Locher, K.P. | 2.653 | X-RAY DIFFRACTION | 0.259 | 0.223 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ovw/annotation/5ovw_I_VH.ann | null | sabdab_dataset/5ovw/imgt/5ovw_I_H.ann | null | sabdab_dataset/5ovw/sequence/5ovw_raw.pdb | sabdab_dataset/5ovw/sequence/5ovw_I_VH.fa | null | sabdab_dataset/5ovw/structure/5ovw.pdb | sabdab_dataset/5ovw/structure/chothia/5ovw.pdb | true | false | train |
5ovw | J | null | 0 | D | protein | null | vitamin b12-binding protein | TRANSPORT PROTEIN | 08/30/17 | Nanobody-bound BtuF, the vitamin B12 binding protein in Escherichia coli | ESCHERICHIA COLI; LAMA GLAMA | lama glama | null | escherichia coli | Mireku, S.A., Sauer, M.M., Glockshuber, R., Locher, K.P. | 2.653 | X-RAY DIFFRACTION | 0.259 | 0.223 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ovw/annotation/5ovw_J_VH.ann | null | sabdab_dataset/5ovw/imgt/5ovw_J_H.ann | null | sabdab_dataset/5ovw/sequence/5ovw_raw.pdb | sabdab_dataset/5ovw/sequence/5ovw_J_VH.fa | null | sabdab_dataset/5ovw/structure/5ovw.pdb | sabdab_dataset/5ovw/structure/chothia/5ovw.pdb | true | false | train |
5ovw | K | null | 0 | E | protein | null | vitamin b12-binding protein | TRANSPORT PROTEIN | 08/30/17 | Nanobody-bound BtuF, the vitamin B12 binding protein in Escherichia coli | ESCHERICHIA COLI; LAMA GLAMA | lama glama | null | escherichia coli | Mireku, S.A., Sauer, M.M., Glockshuber, R., Locher, K.P. | 2.653 | X-RAY DIFFRACTION | 0.259 | 0.223 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ovw/annotation/5ovw_K_VH.ann | null | sabdab_dataset/5ovw/imgt/5ovw_K_H.ann | null | sabdab_dataset/5ovw/sequence/5ovw_raw.pdb | sabdab_dataset/5ovw/sequence/5ovw_K_VH.fa | null | sabdab_dataset/5ovw/structure/5ovw.pdb | sabdab_dataset/5ovw/structure/chothia/5ovw.pdb | true | false | train |
5ovw | L | null | 0 | F | protein | null | vitamin b12-binding protein | TRANSPORT PROTEIN | 08/30/17 | Nanobody-bound BtuF, the vitamin B12 binding protein in Escherichia coli | ESCHERICHIA COLI; LAMA GLAMA | lama glama | null | escherichia coli | Mireku, S.A., Sauer, M.M., Glockshuber, R., Locher, K.P. | 2.653 | X-RAY DIFFRACTION | 0.259 | 0.223 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5ovw/annotation/5ovw_L_VH.ann | null | sabdab_dataset/5ovw/imgt/5ovw_L_H.ann | null | sabdab_dataset/5ovw/sequence/5ovw_raw.pdb | sabdab_dataset/5ovw/sequence/5ovw_L_VH.fa | null | sabdab_dataset/5ovw/structure/5ovw.pdb | sabdab_dataset/5ovw/structure/chothia/5ovw.pdb | true | false | validation |
5owp | H | h | 0 | D | peptide | null | 5,6-dihydro-benzo[h]cinnolin-3-ylamine | IMMUNE SYSTEM | 09/02/17 | Crystal structure of glycopeptide ""GVTSAfPDT*RPAP"" in complex with scFv-SM3 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | synthetic construct | Bermejo, I.A., Albuquerque, I.S., Somovilla, V.J., Martinez-Saez, N., Castro-Lopez, J., Garcia-Martin, F., Hinou, H., Nishimura, S., Jimenez-Barbero, J., Asensio, J.L., Avenoza, A., Busto, J.H., Hurtado-Guerrero, R., Peregrina, J.M., Bernardes, G.J., Corzana, F. | 1.85 | X-RAY DIFFRACTION | 0.256 | 0.194 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/5owp/abangle/5owp.abangle | sabdab_dataset/5owp/annotation/5owp_H_VH.ann | sabdab_dataset/5owp/annotation/5owp_H_VL.ann | sabdab_dataset/5owp/imgt/5owp_H_H.ann | sabdab_dataset/5owp/imgt/5owp_H_L.ann | sabdab_dataset/5owp/sequence/5owp_raw.pdb | sabdab_dataset/5owp/sequence/5owp_H_VH.fa | sabdab_dataset/5owp/sequence/5owp_H_VL.fa | sabdab_dataset/5owp/structure/5owp.pdb | sabdab_dataset/5owp/structure/chothia/5owp.pdb | false | false | train |
5sv3 | A | null | 0 | B | protein | null | ricin | TOXIN | 08/04/16 | RTA1-33/44-198 (RVEC) bound to Single Domain Antibody A3C8 | LAMA GLAMA; RICINUS COMMUNIS | lama glama | null | ricinus communis | Compton, J.R., Legler, P.M. | 2.73 | X-RAY DIFFRACTION | 0.267 | 0.226 | false | true | IGHV1 | null | null | 0 | -12.554773 | SPR | null | TBD | null | sabdab_dataset/5sv3/annotation/5sv3_A_VH.ann | null | sabdab_dataset/5sv3/imgt/5sv3_A_H.ann | null | sabdab_dataset/5sv3/sequence/5sv3_raw.pdb | sabdab_dataset/5sv3/sequence/5sv3_A_VH.fa | null | sabdab_dataset/5sv3/structure/5sv3.pdb | sabdab_dataset/5sv3/structure/chothia/5sv3.pdb | false | false | train |
5sv3 | C | null | 0 | D | protein | null | ricin | TOXIN | 08/04/16 | RTA1-33/44-198 (RVEC) bound to Single Domain Antibody A3C8 | LAMA GLAMA; RICINUS COMMUNIS | lama glama | null | ricinus communis | Compton, J.R., Legler, P.M. | 2.73 | X-RAY DIFFRACTION | 0.267 | 0.226 | false | true | IGHV1 | null | null | 0 | -12.554773 | SPR | null | TBD | null | sabdab_dataset/5sv3/annotation/5sv3_C_VH.ann | null | sabdab_dataset/5sv3/imgt/5sv3_C_H.ann | null | sabdab_dataset/5sv3/sequence/5sv3_raw.pdb | sabdab_dataset/5sv3/sequence/5sv3_C_VH.fa | null | sabdab_dataset/5sv3/structure/5sv3.pdb | sabdab_dataset/5sv3/structure/chothia/5sv3.pdb | false | false | test |
5sv4 | A | null | 0 | null | null | null | null | TOXIN | 08/04/16 | Anti-Ricin A-chain Single Domain Antibody A3C8 | LAMA GLAMA | lama glama | null | null | Compton, J.R., Legler, P.M. | 2.7 | X-RAY DIFFRACTION | 0.246 | 0.198 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5sv4/annotation/5sv4_A_VH.ann | null | sabdab_dataset/5sv4/imgt/5sv4_A_H.ann | null | sabdab_dataset/5sv4/sequence/5sv4_raw.pdb | sabdab_dataset/5sv4/sequence/5sv4_A_VH.fa | null | sabdab_dataset/5sv4/structure/5sv4.pdb | sabdab_dataset/5sv4/structure/chothia/5sv4.pdb | true | false | train |
5sv4 | B | null | 0 | null | null | null | null | TOXIN | 08/04/16 | Anti-Ricin A-chain Single Domain Antibody A3C8 | LAMA GLAMA | lama glama | null | null | Compton, J.R., Legler, P.M. | 2.7 | X-RAY DIFFRACTION | 0.246 | 0.198 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/5sv4/annotation/5sv4_B_VH.ann | null | sabdab_dataset/5sv4/imgt/5sv4_B_H.ann | null | sabdab_dataset/5sv4/sequence/5sv4_raw.pdb | sabdab_dataset/5sv4/sequence/5sv4_B_VH.fa | null | sabdab_dataset/5sv4/structure/5sv4.pdb | sabdab_dataset/5sv4/structure/chothia/5sv4.pdb | true | false | train |
5sx4 | H | L | 0 | N | protein | null | epidermal growth factor receptor | TRANSFERASE/IMMUNE SYSTEM | 08/09/16 | Crystal Structure of panitumumab in complex with epidermal growth factor receptor domain 3. | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Sickmier, E.A., Kurzeja, R.J.M., Michelsen, K., Mukta, V., Yang, E., Tasker, A.S. | 2.8 | X-RAY DIFFRACTION | 0.266 | 0.223 | false | true | IGHV4 | IGKV1 | Kappa | 0 | -12.917374 | SPR | null | TBD | sabdab_dataset/5sx4/abangle/5sx4.abangle | sabdab_dataset/5sx4/annotation/5sx4_H_VH.ann | sabdab_dataset/5sx4/annotation/5sx4_L_VL.ann | sabdab_dataset/5sx4/imgt/5sx4_H_H.ann | sabdab_dataset/5sx4/imgt/5sx4_L_L.ann | sabdab_dataset/5sx4/sequence/5sx4_raw.pdb | sabdab_dataset/5sx4/sequence/5sx4_H_VH.fa | sabdab_dataset/5sx4/sequence/5sx4_L_VL.fa | sabdab_dataset/5sx4/structure/5sx4.pdb | sabdab_dataset/5sx4/structure/chothia/5sx4.pdb | true | false | train |
5sx4 | J | I | 0 | M | protein | null | epidermal growth factor receptor | TRANSFERASE/IMMUNE SYSTEM | 08/09/16 | Crystal Structure of panitumumab in complex with epidermal growth factor receptor domain 3. | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Sickmier, E.A., Kurzeja, R.J.M., Michelsen, K., Mukta, V., Yang, E., Tasker, A.S. | 2.8 | X-RAY DIFFRACTION | 0.266 | 0.223 | false | true | IGHV4 | IGKV1 | Kappa | 0 | -12.917374 | SPR | null | TBD | sabdab_dataset/5sx4/abangle/5sx4.abangle | sabdab_dataset/5sx4/annotation/5sx4_J_VH.ann | sabdab_dataset/5sx4/annotation/5sx4_I_VL.ann | sabdab_dataset/5sx4/imgt/5sx4_J_H.ann | sabdab_dataset/5sx4/imgt/5sx4_I_L.ann | sabdab_dataset/5sx4/sequence/5sx4_raw.pdb | sabdab_dataset/5sx4/sequence/5sx4_J_VH.fa | sabdab_dataset/5sx4/sequence/5sx4_I_VL.fa | sabdab_dataset/5sx4/structure/5sx4.pdb | sabdab_dataset/5sx4/structure/chothia/5sx4.pdb | true | false | train |
5sx5 | H | L | 0 | N | protein | null | epidermal growth factor receptor | TRANSFERASE/IMMUNE SYSTEM | 08/09/16 | Crystal Structure of panitumumab in complex with epidermal growth factor receptor domain 3 mutant S468R. | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Sickmier, E.A. | 2.5 | X-RAY DIFFRACTION | 0.250 | 0.226 | false | true | IGHV4 | IGKV1 | Kappa | 0 | -12.19539 | SPR | null | TBD | sabdab_dataset/5sx5/abangle/5sx5.abangle | sabdab_dataset/5sx5/annotation/5sx5_H_VH.ann | sabdab_dataset/5sx5/annotation/5sx5_L_VL.ann | sabdab_dataset/5sx5/imgt/5sx5_H_H.ann | sabdab_dataset/5sx5/imgt/5sx5_L_L.ann | sabdab_dataset/5sx5/sequence/5sx5_raw.pdb | sabdab_dataset/5sx5/sequence/5sx5_H_VH.fa | sabdab_dataset/5sx5/sequence/5sx5_L_VL.fa | sabdab_dataset/5sx5/structure/5sx5.pdb | sabdab_dataset/5sx5/structure/chothia/5sx5.pdb | false | false | validation |
5sx5 | J | K | 0 | M | protein | null | epidermal growth factor receptor | TRANSFERASE/IMMUNE SYSTEM | 08/09/16 | Crystal Structure of panitumumab in complex with epidermal growth factor receptor domain 3 mutant S468R. | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Sickmier, E.A. | 2.5 | X-RAY DIFFRACTION | 0.250 | 0.226 | false | true | IGHV4 | IGKV1 | Kappa | 0 | -12.19539 | SPR | null | TBD | sabdab_dataset/5sx5/abangle/5sx5.abangle | sabdab_dataset/5sx5/annotation/5sx5_J_VH.ann | sabdab_dataset/5sx5/annotation/5sx5_K_VL.ann | sabdab_dataset/5sx5/imgt/5sx5_J_H.ann | sabdab_dataset/5sx5/imgt/5sx5_K_L.ann | sabdab_dataset/5sx5/sequence/5sx5_raw.pdb | sabdab_dataset/5sx5/sequence/5sx5_J_VH.fa | sabdab_dataset/5sx5/sequence/5sx5_K_VL.fa | sabdab_dataset/5sx5/structure/5sx5.pdb | sabdab_dataset/5sx5/structure/chothia/5sx5.pdb | false | false | validation |
5sy8 | H | L | 0 | O | protein | null | 10e8 epitope scaffold t117v2 | IMMUNE SYSTEM | 08/10/16 | Crystal structure of the complex of 10E8 Fab light chain mutant1 and T117v2 HIV-1 MPER scaffold | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Irimia, A., Wilson, I.A. | 1.62 | X-RAY DIFFRACTION | 0.214 | 0.172 | false | true | IGHV3 | IGLV3 | Lambda | 0 | -14.93954 | SPR | null | TBD | sabdab_dataset/5sy8/abangle/5sy8.abangle | sabdab_dataset/5sy8/annotation/5sy8_H_VH.ann | sabdab_dataset/5sy8/annotation/5sy8_L_VL.ann | sabdab_dataset/5sy8/imgt/5sy8_H_H.ann | sabdab_dataset/5sy8/imgt/5sy8_L_L.ann | sabdab_dataset/5sy8/sequence/5sy8_raw.pdb | sabdab_dataset/5sy8/sequence/5sy8_H_VH.fa | sabdab_dataset/5sy8/sequence/5sy8_L_VL.fa | sabdab_dataset/5sy8/structure/5sy8.pdb | sabdab_dataset/5sy8/structure/chothia/5sy8.pdb | false | false | train |
5szf | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/16 | 2A10 FAB fragment 2.54 Angstoms | HOMO SAPIENS | homo sapiens | homo sapiens | null | Jackson, C.J., Fisher, C. | 2.52 | X-RAY DIFFRACTION | 0.248 | 0.225 | false | true | IGHV9 | IGKV10 | Kappa | null | null | null | null | null | sabdab_dataset/5szf/abangle/5szf.abangle | sabdab_dataset/5szf/annotation/5szf_H_VH.ann | sabdab_dataset/5szf/annotation/5szf_L_VL.ann | sabdab_dataset/5szf/imgt/5szf_H_H.ann | sabdab_dataset/5szf/imgt/5szf_L_L.ann | sabdab_dataset/5szf/sequence/5szf_raw.pdb | sabdab_dataset/5szf/sequence/5szf_H_VH.fa | sabdab_dataset/5szf/sequence/5szf_L_VL.fa | sabdab_dataset/5szf/structure/5szf.pdb | sabdab_dataset/5szf/structure/chothia/5szf.pdb | false | false | train |
5t0y | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 08/17/16 | 2A10 Antibody FAB fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Jackson, C.J., Fisher, C. | 3.011 | X-RAY DIFFRACTION | 0.247 | 0.225 | false | true | IGHV9 | IGKV10 | Kappa | null | null | null | null | null | sabdab_dataset/5t0y/abangle/5t0y.abangle | sabdab_dataset/5t0y/annotation/5t0y_A_VH.ann | sabdab_dataset/5t0y/annotation/5t0y_B_VL.ann | sabdab_dataset/5t0y/imgt/5t0y_A_H.ann | sabdab_dataset/5t0y/imgt/5t0y_B_L.ann | sabdab_dataset/5t0y/sequence/5t0y_raw.pdb | sabdab_dataset/5t0y/sequence/5t0y_A_VH.fa | sabdab_dataset/5t0y/sequence/5t0y_B_VL.fa | sabdab_dataset/5t0y/structure/5t0y.pdb | sabdab_dataset/5t0y/structure/chothia/5t0y.pdb | true | false | train |
5t0y | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/17/16 | 2A10 Antibody FAB fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Jackson, C.J., Fisher, C. | 3.011 | X-RAY DIFFRACTION | 0.247 | 0.225 | false | true | IGHV9 | IGKV10 | Kappa | null | null | null | null | null | sabdab_dataset/5t0y/abangle/5t0y.abangle | sabdab_dataset/5t0y/annotation/5t0y_H_VH.ann | sabdab_dataset/5t0y/annotation/5t0y_L_VL.ann | sabdab_dataset/5t0y/imgt/5t0y_H_H.ann | sabdab_dataset/5t0y/imgt/5t0y_L_L.ann | sabdab_dataset/5t0y/sequence/5t0y_raw.pdb | sabdab_dataset/5t0y/sequence/5t0y_H_VH.fa | sabdab_dataset/5t0y/sequence/5t0y_L_VL.fa | sabdab_dataset/5t0y/structure/5t0y.pdb | sabdab_dataset/5t0y/structure/chothia/5t0y.pdb | true | false | train |
5t0y | I | G | 0 | null | null | null | null | IMMUNE SYSTEM | 08/17/16 | 2A10 Antibody FAB fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Jackson, C.J., Fisher, C. | 3.011 | X-RAY DIFFRACTION | 0.247 | 0.225 | false | true | IGHV9 | IGKV10 | Kappa | null | null | null | null | null | sabdab_dataset/5t0y/abangle/5t0y.abangle | sabdab_dataset/5t0y/annotation/5t0y_I_VH.ann | sabdab_dataset/5t0y/annotation/5t0y_G_VL.ann | sabdab_dataset/5t0y/imgt/5t0y_I_H.ann | sabdab_dataset/5t0y/imgt/5t0y_G_L.ann | sabdab_dataset/5t0y/sequence/5t0y_raw.pdb | sabdab_dataset/5t0y/sequence/5t0y_I_VH.fa | sabdab_dataset/5t0y/sequence/5t0y_G_VL.fa | sabdab_dataset/5t0y/structure/5t0y.pdb | sabdab_dataset/5t0y/structure/chothia/5t0y.pdb | true | false | train |
5t1d | H | L | 0 | B | protein | null | envelope glycoprotein l | VIRAL PROTEIN | 08/18/16 | Crystal structure of EBV gHgL/gp42/E1D1 complex | EPSTEIN-BARR VIRUS (STRAIN B95-8); EPSTEIN-BARR VIRUS (STRAIN GD1); MUS MUSCULUS | mus musculus | mus musculus | epstein-barr virus (strain b95-8) | Sathiyamoorthy, K., Jardetzky, T.S. | 3.1 | X-RAY DIFFRACTION | 0.265 | 0.212 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/5t1d/abangle/5t1d.abangle | sabdab_dataset/5t1d/annotation/5t1d_H_VH.ann | sabdab_dataset/5t1d/annotation/5t1d_L_VL.ann | sabdab_dataset/5t1d/imgt/5t1d_H_H.ann | sabdab_dataset/5t1d/imgt/5t1d_L_L.ann | sabdab_dataset/5t1d/sequence/5t1d_raw.pdb | sabdab_dataset/5t1d/sequence/5t1d_H_VH.fa | sabdab_dataset/5t1d/sequence/5t1d_L_VL.fa | sabdab_dataset/5t1d/structure/5t1d.pdb | sabdab_dataset/5t1d/structure/chothia/5t1d.pdb | true | false | train |
5t1k | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 08/19/16 | Cetuximab Fab in complex with CQFDA(Ph)2STRRLKC | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.48 | X-RAY DIFFRACTION | 0.213 | 0.160 | false | true | IGHV2 | IGKV5 | Kappa | 0.000001 | -8.56162 | Unknown | null | TBD | sabdab_dataset/5t1k/abangle/5t1k.abangle | sabdab_dataset/5t1k/annotation/5t1k_B_VH.ann | sabdab_dataset/5t1k/annotation/5t1k_A_VL.ann | sabdab_dataset/5t1k/imgt/5t1k_B_H.ann | sabdab_dataset/5t1k/imgt/5t1k_A_L.ann | sabdab_dataset/5t1k/sequence/5t1k_raw.pdb | sabdab_dataset/5t1k/sequence/5t1k_B_VH.fa | sabdab_dataset/5t1k/sequence/5t1k_A_VL.fa | sabdab_dataset/5t1k/structure/5t1k.pdb | sabdab_dataset/5t1k/structure/chothia/5t1k.pdb | false | false | train |
5t1k | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 08/19/16 | Cetuximab Fab in complex with CQFDA(Ph)2STRRLKC | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.48 | X-RAY DIFFRACTION | 0.213 | 0.160 | false | true | IGHV2 | IGKV5 | Kappa | 0.000001 | -8.56162 | Unknown | null | TBD | sabdab_dataset/5t1k/abangle/5t1k.abangle | sabdab_dataset/5t1k/annotation/5t1k_D_VH.ann | sabdab_dataset/5t1k/annotation/5t1k_C_VL.ann | sabdab_dataset/5t1k/imgt/5t1k_D_H.ann | sabdab_dataset/5t1k/imgt/5t1k_C_L.ann | sabdab_dataset/5t1k/sequence/5t1k_raw.pdb | sabdab_dataset/5t1k/sequence/5t1k_D_VH.fa | sabdab_dataset/5t1k/sequence/5t1k_C_VL.fa | sabdab_dataset/5t1k/structure/5t1k.pdb | sabdab_dataset/5t1k/structure/chothia/5t1k.pdb | false | false | train |
5t1l | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 08/19/16 | Cetuximab Fab in complex with CQA(Ph)2DLSTRRLKC peptide | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.48 | X-RAY DIFFRACTION | 0.204 | 0.158 | false | true | IGHV2 | IGKV5 | Kappa | 0 | -9.031008 | Unknown | null | TBD | sabdab_dataset/5t1l/abangle/5t1l.abangle | sabdab_dataset/5t1l/annotation/5t1l_B_VH.ann | sabdab_dataset/5t1l/annotation/5t1l_A_VL.ann | sabdab_dataset/5t1l/imgt/5t1l_B_H.ann | sabdab_dataset/5t1l/imgt/5t1l_A_L.ann | sabdab_dataset/5t1l/sequence/5t1l_raw.pdb | sabdab_dataset/5t1l/sequence/5t1l_B_VH.fa | sabdab_dataset/5t1l/sequence/5t1l_A_VL.fa | sabdab_dataset/5t1l/structure/5t1l.pdb | sabdab_dataset/5t1l/structure/chothia/5t1l.pdb | false | false | train |
5t1l | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 08/19/16 | Cetuximab Fab in complex with CQA(Ph)2DLSTRRLKC peptide | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.48 | X-RAY DIFFRACTION | 0.204 | 0.158 | false | true | IGHV2 | IGKV5 | Kappa | 0 | -9.031008 | Unknown | null | TBD | sabdab_dataset/5t1l/abangle/5t1l.abangle | sabdab_dataset/5t1l/annotation/5t1l_D_VH.ann | sabdab_dataset/5t1l/annotation/5t1l_C_VL.ann | sabdab_dataset/5t1l/imgt/5t1l_D_H.ann | sabdab_dataset/5t1l/imgt/5t1l_C_L.ann | sabdab_dataset/5t1l/sequence/5t1l_raw.pdb | sabdab_dataset/5t1l/sequence/5t1l_D_VH.fa | sabdab_dataset/5t1l/sequence/5t1l_C_VL.fa | sabdab_dataset/5t1l/structure/5t1l.pdb | sabdab_dataset/5t1l/structure/chothia/5t1l.pdb | false | false | train |
5t1m | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 08/19/16 | Cetuximab Fab in complex with CQYDLSTRRLKC | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.53 | X-RAY DIFFRACTION | 0.216 | 0.153 | false | true | IGHV2 | IGKV5 | Kappa | 0.000002 | -7.945233 | Unknown | null | TBD | sabdab_dataset/5t1m/abangle/5t1m.abangle | sabdab_dataset/5t1m/annotation/5t1m_B_VH.ann | sabdab_dataset/5t1m/annotation/5t1m_A_VL.ann | sabdab_dataset/5t1m/imgt/5t1m_B_H.ann | sabdab_dataset/5t1m/imgt/5t1m_A_L.ann | sabdab_dataset/5t1m/sequence/5t1m_raw.pdb | sabdab_dataset/5t1m/sequence/5t1m_B_VH.fa | sabdab_dataset/5t1m/sequence/5t1m_A_VL.fa | sabdab_dataset/5t1m/structure/5t1m.pdb | sabdab_dataset/5t1m/structure/chothia/5t1m.pdb | false | false | test |
5t1m | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 08/19/16 | Cetuximab Fab in complex with CQYDLSTRRLKC | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.53 | X-RAY DIFFRACTION | 0.216 | 0.153 | false | true | IGHV2 | IGKV5 | Kappa | 0.000002 | -7.945233 | Unknown | null | TBD | sabdab_dataset/5t1m/abangle/5t1m.abangle | sabdab_dataset/5t1m/annotation/5t1m_D_VH.ann | sabdab_dataset/5t1m/annotation/5t1m_C_VL.ann | sabdab_dataset/5t1m/imgt/5t1m_D_H.ann | sabdab_dataset/5t1m/imgt/5t1m_C_L.ann | sabdab_dataset/5t1m/sequence/5t1m_raw.pdb | sabdab_dataset/5t1m/sequence/5t1m_D_VH.fa | sabdab_dataset/5t1m/sequence/5t1m_C_VL.fa | sabdab_dataset/5t1m/structure/5t1m.pdb | sabdab_dataset/5t1m/structure/chothia/5t1m.pdb | false | false | train |
5t29 | H | L | 0 | O | protein | null | 10e8 epitope scaffold t117v2 | IMMUNE SYSTEM | 08/23/16 | Crystal structure of 10E8 Fab light chain mutant3, against the MPER region of the HIV-1 Env, in complex with the MPER epitope scaffold T117v2 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Irimia, A., Wilson, I.A. | 2.03 | X-RAY DIFFRACTION | 0.213 | 0.174 | false | true | IGHV3 | IGLV3 | Lambda | 0 | -12.853036 | SPR | null | TBD | sabdab_dataset/5t29/abangle/5t29.abangle | sabdab_dataset/5t29/annotation/5t29_H_VH.ann | sabdab_dataset/5t29/annotation/5t29_L_VL.ann | sabdab_dataset/5t29/imgt/5t29_H_H.ann | sabdab_dataset/5t29/imgt/5t29_L_L.ann | sabdab_dataset/5t29/sequence/5t29_raw.pdb | sabdab_dataset/5t29/sequence/5t29_H_VH.fa | sabdab_dataset/5t29/sequence/5t29_L_VL.fa | sabdab_dataset/5t29/structure/5t29.pdb | sabdab_dataset/5t29/structure/chothia/5t29.pdb | false | false | train |
5t33 | H | L | 0 | G | protein | null | rhpa gp120 core | IMMUNE SYSTEM | 08/24/16 | Crystal structure of strain-specific glycan-dependent CD4 binding site-directed neutralizing antibody CAP257-RH1, in complex with HIV-1 strain RHPA gp120 core with an oligomannose N276 glycan. | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS | homo sapiens | homo sapiens | human immunodeficiency virus | Wibmer, C.K., Gorman, J., Kwong, P.D. | 3.2092 | X-RAY DIFFRACTION | 0.269 | 0.229 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/5t33/abangle/5t33.abangle | sabdab_dataset/5t33/annotation/5t33_H_VH.ann | sabdab_dataset/5t33/annotation/5t33_L_VL.ann | sabdab_dataset/5t33/imgt/5t33_H_H.ann | sabdab_dataset/5t33/imgt/5t33_L_L.ann | sabdab_dataset/5t33/sequence/5t33_raw.pdb | sabdab_dataset/5t33/sequence/5t33_H_VH.fa | sabdab_dataset/5t33/sequence/5t33_L_VL.fa | sabdab_dataset/5t33/structure/5t33.pdb | sabdab_dataset/5t33/structure/chothia/5t33.pdb | true | false | train |
5t3s | D | E | 0 | B | protein | null | envelope glycoprotein gp160 | IMMUNE SYSTEM | 08/26/16 | HIV gp140 trimer MD39-10MUTA in complex with Fabs PGT124 and 35022 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Stanfield, R.L., Wilson, I.A. | 4.5 | X-RAY DIFFRACTION | 0.309 | 0.270 | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/5t3s/abangle/5t3s.abangle | sabdab_dataset/5t3s/annotation/5t3s_D_VH.ann | sabdab_dataset/5t3s/annotation/5t3s_E_VL.ann | sabdab_dataset/5t3s/imgt/5t3s_D_H.ann | sabdab_dataset/5t3s/imgt/5t3s_E_L.ann | sabdab_dataset/5t3s/sequence/5t3s_raw.pdb | sabdab_dataset/5t3s/sequence/5t3s_D_VH.fa | sabdab_dataset/5t3s/sequence/5t3s_E_VL.fa | sabdab_dataset/5t3s/structure/5t3s.pdb | sabdab_dataset/5t3s/structure/chothia/5t3s.pdb | false | false | train |
5t3s | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | IMMUNE SYSTEM | 08/26/16 | HIV gp140 trimer MD39-10MUTA in complex with Fabs PGT124 and 35022 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Stanfield, R.L., Wilson, I.A. | 4.5 | X-RAY DIFFRACTION | 0.309 | 0.270 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/5t3s/abangle/5t3s.abangle | sabdab_dataset/5t3s/annotation/5t3s_H_VH.ann | sabdab_dataset/5t3s/annotation/5t3s_L_VL.ann | sabdab_dataset/5t3s/imgt/5t3s_H_H.ann | sabdab_dataset/5t3s/imgt/5t3s_L_L.ann | sabdab_dataset/5t3s/sequence/5t3s_raw.pdb | sabdab_dataset/5t3s/sequence/5t3s_H_VH.fa | sabdab_dataset/5t3s/sequence/5t3s_L_VL.fa | sabdab_dataset/5t3s/structure/5t3s.pdb | sabdab_dataset/5t3s/structure/chothia/5t3s.pdb | false | false | train |
5t3x | D | E | 0 | G | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/26/16 | 3.9 Angstrom Crystal Structure of a Fully and Natively Glycosylated BG505 SOSIP.664 HIV-1 Env Trimer in Complex with the Broadly Neutralizing Antibodies IOMA and 10-1074. | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gristick, H.B., Bjorkman, P.J. | 3.9 | X-RAY DIFFRACTION | 0.331 | 0.296 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/5t3x/abangle/5t3x.abangle | sabdab_dataset/5t3x/annotation/5t3x_D_VH.ann | sabdab_dataset/5t3x/annotation/5t3x_E_VL.ann | sabdab_dataset/5t3x/imgt/5t3x_D_H.ann | sabdab_dataset/5t3x/imgt/5t3x_E_L.ann | sabdab_dataset/5t3x/sequence/5t3x_raw.pdb | sabdab_dataset/5t3x/sequence/5t3x_D_VH.fa | sabdab_dataset/5t3x/sequence/5t3x_E_VL.fa | sabdab_dataset/5t3x/structure/5t3x.pdb | sabdab_dataset/5t3x/structure/chothia/5t3x.pdb | false | false | train |
5t3x | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/26/16 | 3.9 Angstrom Crystal Structure of a Fully and Natively Glycosylated BG505 SOSIP.664 HIV-1 Env Trimer in Complex with the Broadly Neutralizing Antibodies IOMA and 10-1074. | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gristick, H.B., Bjorkman, P.J. | 3.9 | X-RAY DIFFRACTION | 0.331 | 0.296 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/5t3x/abangle/5t3x.abangle | sabdab_dataset/5t3x/annotation/5t3x_H_VH.ann | sabdab_dataset/5t3x/annotation/5t3x_L_VL.ann | sabdab_dataset/5t3x/imgt/5t3x_H_H.ann | sabdab_dataset/5t3x/imgt/5t3x_L_L.ann | sabdab_dataset/5t3x/sequence/5t3x_raw.pdb | sabdab_dataset/5t3x/sequence/5t3x_H_VH.fa | sabdab_dataset/5t3x/sequence/5t3x_L_VL.fa | sabdab_dataset/5t3x/structure/5t3x.pdb | sabdab_dataset/5t3x/structure/chothia/5t3x.pdb | false | false | train |
5t3z | D | E | 0 | G | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/26/16 | 3.5 Angstrom Crystal Structure of a Fully and Natively Glycosylated BG505 SOSIP.664 HIV-1 Env Trimer in Complex with the Broadly Neutralizing Antibodies IOMA and 10-1074 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gristick, H.B., Bjorkman, P.J. | 3.5 | X-RAY DIFFRACTION | 0.298 | 0.275 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/5t3z/abangle/5t3z.abangle | sabdab_dataset/5t3z/annotation/5t3z_D_VH.ann | sabdab_dataset/5t3z/annotation/5t3z_E_VL.ann | sabdab_dataset/5t3z/imgt/5t3z_D_H.ann | sabdab_dataset/5t3z/imgt/5t3z_E_L.ann | sabdab_dataset/5t3z/sequence/5t3z_raw.pdb | sabdab_dataset/5t3z/sequence/5t3z_D_VH.fa | sabdab_dataset/5t3z/sequence/5t3z_E_VL.fa | sabdab_dataset/5t3z/structure/5t3z.pdb | sabdab_dataset/5t3z/structure/chothia/5t3z.pdb | false | false | train |
5t3z | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/26/16 | 3.5 Angstrom Crystal Structure of a Fully and Natively Glycosylated BG505 SOSIP.664 HIV-1 Env Trimer in Complex with the Broadly Neutralizing Antibodies IOMA and 10-1074 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gristick, H.B., Bjorkman, P.J. | 3.5 | X-RAY DIFFRACTION | 0.298 | 0.275 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/5t3z/abangle/5t3z.abangle | sabdab_dataset/5t3z/annotation/5t3z_H_VH.ann | sabdab_dataset/5t3z/annotation/5t3z_L_VL.ann | sabdab_dataset/5t3z/imgt/5t3z_H_H.ann | sabdab_dataset/5t3z/imgt/5t3z_L_L.ann | sabdab_dataset/5t3z/sequence/5t3z_raw.pdb | sabdab_dataset/5t3z/sequence/5t3z_H_VH.fa | sabdab_dataset/5t3z/sequence/5t3z_L_VL.fa | sabdab_dataset/5t3z/structure/5t3z.pdb | sabdab_dataset/5t3z/structure/chothia/5t3z.pdb | false | false | train |
5t4z | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 08/30/16 | STRUCTURE OF THE ANTI-HIV ANTIBODY DH501 THAT BINDS GP120 V3 GLYCAN AND THE BASE OF V3 WITH FREE MAN9 GLYCAN | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Nicely, N.I., Haynes, B.F. | 1.991 | X-RAY DIFFRACTION | 0.239 | 0.187 | false | true | IGHV2 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/5t4z/abangle/5t4z.abangle | sabdab_dataset/5t4z/annotation/5t4z_A_VH.ann | sabdab_dataset/5t4z/annotation/5t4z_B_VL.ann | sabdab_dataset/5t4z/imgt/5t4z_A_H.ann | sabdab_dataset/5t4z/imgt/5t4z_B_L.ann | sabdab_dataset/5t4z/sequence/5t4z_raw.pdb | sabdab_dataset/5t4z/sequence/5t4z_A_VH.fa | sabdab_dataset/5t4z/sequence/5t4z_B_VL.fa | sabdab_dataset/5t4z/structure/5t4z.pdb | sabdab_dataset/5t4z/structure/chothia/5t4z.pdb | true | false | train |
5t4z | H | L | 0 | H | carbohydrate | MAN | polysaccharide | IMMUNE SYSTEM | 08/30/16 | STRUCTURE OF THE ANTI-HIV ANTIBODY DH501 THAT BINDS GP120 V3 GLYCAN AND THE BASE OF V3 WITH FREE MAN9 GLYCAN | MACACA MULATTA | macaca mulatta | macaca mulatta | macaca mulatta | Nicely, N.I., Haynes, B.F. | 1.991 | X-RAY DIFFRACTION | 0.239 | 0.187 | false | true | IGHV2 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/5t4z/abangle/5t4z.abangle | sabdab_dataset/5t4z/annotation/5t4z_H_VH.ann | sabdab_dataset/5t4z/annotation/5t4z_L_VL.ann | sabdab_dataset/5t4z/imgt/5t4z_H_H.ann | sabdab_dataset/5t4z/imgt/5t4z_L_L.ann | sabdab_dataset/5t4z/sequence/5t4z_raw.pdb | sabdab_dataset/5t4z/sequence/5t4z_H_VH.fa | sabdab_dataset/5t4z/sequence/5t4z_L_VL.fa | sabdab_dataset/5t4z/structure/5t4z.pdb | sabdab_dataset/5t4z/structure/chothia/5t4z.pdb | true | false | validation |
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