pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 365
values | r_factor stringclasses 358
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values | abangle stringlengths 40 40 ⌀ | annotation_H stringlengths 44 44 ⌀ | annotation_L stringlengths 44 44 ⌀ | imgt_H stringlengths 37 37 ⌀ | imgt_L stringlengths 37 37 ⌀ | sequence_raw stringlengths 41 41 | sequence_H stringlengths 41 41 ⌀ | sequence_L stringlengths 41 41 ⌀ | structure stringlengths 38 38 | structure_chothia stringlengths 46 46 | in_nr_set bool 2
classes | curated_quality_dataset bool 2
classes | split stringclasses 3
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6bzw | C | D | 0 | I | peptide | null | e2 as412 peptide | IMMUNE SYSTEM | 12/26/17 | Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the GL precursor of the broadly neutralizing antibody AP33 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | hepatitis c virus | Tzarum, N., Alemn, F., Wilson, I.A., Law, M. | 2.2 | X-RAY DIFFRACTION | 0.231 | 0.192 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6bzw/abangle/6bzw.abangle | sabdab_dataset/6bzw/annotation/6bzw_C_VH.ann | sabdab_dataset/6bzw/annotation/6bzw_D_VL.ann | sabdab_dataset/6bzw/imgt/6bzw_C_H.ann | sabdab_dataset/6bzw/imgt/6bzw_D_L.ann | sabdab_dataset/6bzw/sequence/6bzw_raw.pdb | sabdab_dataset/6bzw/sequence/6bzw_C_VH.fa | sabdab_dataset/6bzw/sequence/6bzw_D_VL.fa | sabdab_dataset/6bzw/structure/6bzw.pdb | sabdab_dataset/6bzw/structure/chothia/6bzw.pdb | false | false | validation |
6bzw | E | F | 0 | K | peptide | null | e2 as412 peptide | IMMUNE SYSTEM | 12/26/17 | Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the GL precursor of the broadly neutralizing antibody AP33 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | hepatitis c virus | Tzarum, N., Alemn, F., Wilson, I.A., Law, M. | 2.2 | X-RAY DIFFRACTION | 0.231 | 0.192 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6bzw/abangle/6bzw.abangle | sabdab_dataset/6bzw/annotation/6bzw_E_VH.ann | sabdab_dataset/6bzw/annotation/6bzw_F_VL.ann | sabdab_dataset/6bzw/imgt/6bzw_E_H.ann | sabdab_dataset/6bzw/imgt/6bzw_F_L.ann | sabdab_dataset/6bzw/sequence/6bzw_raw.pdb | sabdab_dataset/6bzw/sequence/6bzw_E_VH.fa | sabdab_dataset/6bzw/sequence/6bzw_F_VL.fa | sabdab_dataset/6bzw/structure/6bzw.pdb | sabdab_dataset/6bzw/structure/chothia/6bzw.pdb | false | false | train |
6bzw | G | H | 0 | L | peptide | null | e2 as412 peptide | IMMUNE SYSTEM | 12/26/17 | Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the GL precursor of the broadly neutralizing antibody AP33 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | hepatitis c virus | Tzarum, N., Alemn, F., Wilson, I.A., Law, M. | 2.2 | X-RAY DIFFRACTION | 0.231 | 0.192 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6bzw/abangle/6bzw.abangle | sabdab_dataset/6bzw/annotation/6bzw_G_VH.ann | sabdab_dataset/6bzw/annotation/6bzw_H_VL.ann | sabdab_dataset/6bzw/imgt/6bzw_G_H.ann | sabdab_dataset/6bzw/imgt/6bzw_H_L.ann | sabdab_dataset/6bzw/sequence/6bzw_raw.pdb | sabdab_dataset/6bzw/sequence/6bzw_G_VH.fa | sabdab_dataset/6bzw/sequence/6bzw_H_VL.fa | sabdab_dataset/6bzw/structure/6bzw.pdb | sabdab_dataset/6bzw/structure/chothia/6bzw.pdb | false | false | train |
6bzy | H | L | 0 | B | peptide | null | e2 as412 peptide | IMMUNE SYSTEM | 12/26/17 | Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the 22D11 broadly neutralizing antibody | MUS MUSCULUS; HEPACIVIRUS C | mus musculus | mus musculus | hepacivirus c | Tzarum, N., Alemn, F., Wilson, I.A., Law, M. | 1.6 | X-RAY DIFFRACTION | 0.218 | 0.188 | false | true | IGHV2 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6bzy/abangle/6bzy.abangle | sabdab_dataset/6bzy/annotation/6bzy_H_VH.ann | sabdab_dataset/6bzy/annotation/6bzy_L_VL.ann | sabdab_dataset/6bzy/imgt/6bzy_H_H.ann | sabdab_dataset/6bzy/imgt/6bzy_L_L.ann | sabdab_dataset/6bzy/sequence/6bzy_raw.pdb | sabdab_dataset/6bzy/sequence/6bzy_H_VH.fa | sabdab_dataset/6bzy/sequence/6bzy_L_VL.fa | sabdab_dataset/6bzy/structure/6bzy.pdb | sabdab_dataset/6bzy/structure/chothia/6bzy.pdb | true | false | train |
6c08 | A | B | 0 | C | protein | null | sodium-coupled neutral amino acid transporter 9 | MEMBRANE PROTEIN | 12/28/17 | Zebrafish SLC38A9 with arginine bound in the cytosol open state | DANIO RERIO; MUS MUSCULUS | mus musculus | mus musculus | danio rerio | Lei, H.-T., Gonen, T. | 3.17 | X-RAY DIFFRACTION | 0.286 | 0.267 | false | false | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/6c08/abangle/6c08.abangle | sabdab_dataset/6c08/annotation/6c08_A_VH.ann | sabdab_dataset/6c08/annotation/6c08_B_VL.ann | sabdab_dataset/6c08/imgt/6c08_A_H.ann | sabdab_dataset/6c08/imgt/6c08_B_L.ann | sabdab_dataset/6c08/sequence/6c08_raw.pdb | sabdab_dataset/6c08/sequence/6c08_A_VH.fa | sabdab_dataset/6c08/sequence/6c08_B_VL.fa | sabdab_dataset/6c08/structure/6c08.pdb | sabdab_dataset/6c08/structure/chothia/6c08.pdb | true | false | validation |
6c08 | D | E | 0 | F | protein | null | sodium-coupled neutral amino acid transporter 9 | MEMBRANE PROTEIN | 12/28/17 | Zebrafish SLC38A9 with arginine bound in the cytosol open state | DANIO RERIO; MUS MUSCULUS | mus musculus | mus musculus | danio rerio | Lei, H.-T., Gonen, T. | 3.17 | X-RAY DIFFRACTION | 0.286 | 0.267 | false | false | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/6c08/abangle/6c08.abangle | sabdab_dataset/6c08/annotation/6c08_D_VH.ann | sabdab_dataset/6c08/annotation/6c08_E_VL.ann | sabdab_dataset/6c08/imgt/6c08_D_H.ann | sabdab_dataset/6c08/imgt/6c08_E_L.ann | sabdab_dataset/6c08/sequence/6c08_raw.pdb | sabdab_dataset/6c08/sequence/6c08_D_VH.fa | sabdab_dataset/6c08/sequence/6c08_E_VL.fa | sabdab_dataset/6c08/structure/6c08.pdb | sabdab_dataset/6c08/structure/chothia/6c08.pdb | true | false | train |
6c5h | H | L | 0 | H | carbohydrate | GP1 | polysaccharide | IMMUNE SYSTEM, SUGAR BINDING PROTEIN | 01/16/18 | S25-5 Fab in complex with Chlamydiaceae-specific LPS antigen | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Evans, S.V., Haji-Ghassemi, O. | 1.99 | X-RAY DIFFRACTION | 0.226 | 0.187 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6c5h/abangle/6c5h.abangle | sabdab_dataset/6c5h/annotation/6c5h_H_VH.ann | sabdab_dataset/6c5h/annotation/6c5h_L_VL.ann | sabdab_dataset/6c5h/imgt/6c5h_H_H.ann | sabdab_dataset/6c5h/imgt/6c5h_L_L.ann | sabdab_dataset/6c5h/sequence/6c5h_raw.pdb | sabdab_dataset/6c5h/sequence/6c5h_H_VH.fa | sabdab_dataset/6c5h/sequence/6c5h_L_VL.fa | sabdab_dataset/6c5h/structure/6c5h.pdb | sabdab_dataset/6c5h/structure/chothia/6c5h.pdb | false | false | train |
6c5i | H | L | 0 | null | null | null | null | SUGAR BINDING PROTEIN | 01/16/18 | Unliganded S25-5 Fab | MUS MUSCULUS | mus musculus | mus musculus | null | Evans, S.V., Haji-Ghassemi, O. | 1.89 | X-RAY DIFFRACTION | 0.231 | 0.193 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6c5i/abangle/6c5i.abangle | sabdab_dataset/6c5i/annotation/6c5i_H_VH.ann | sabdab_dataset/6c5i/annotation/6c5i_L_VL.ann | sabdab_dataset/6c5i/imgt/6c5i_H_H.ann | sabdab_dataset/6c5i/imgt/6c5i_L_L.ann | sabdab_dataset/6c5i/sequence/6c5i_raw.pdb | sabdab_dataset/6c5i/sequence/6c5i_H_VH.fa | sabdab_dataset/6c5i/sequence/6c5i_L_VL.fa | sabdab_dataset/6c5i/structure/6c5i.pdb | sabdab_dataset/6c5i/structure/chothia/6c5i.pdb | false | false | test |
6c5j | H | L | 0 | H | carbohydrate | GP1 | polysaccharide | IMMUNE SYSTEM, SUGAR BINDING PROTEIN | 01/16/18 | S25-23 Fab in complex with Chlamydiaceae LPS (Crystal form 1) | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Haji-Ghassemi, O., Evans, S.V. | 2.29 | X-RAY DIFFRACTION | 0.239 | 0.193 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6c5j/abangle/6c5j.abangle | sabdab_dataset/6c5j/annotation/6c5j_H_VH.ann | sabdab_dataset/6c5j/annotation/6c5j_L_VL.ann | sabdab_dataset/6c5j/imgt/6c5j_H_H.ann | sabdab_dataset/6c5j/imgt/6c5j_L_L.ann | sabdab_dataset/6c5j/sequence/6c5j_raw.pdb | sabdab_dataset/6c5j/sequence/6c5j_H_VH.fa | sabdab_dataset/6c5j/sequence/6c5j_L_VL.fa | sabdab_dataset/6c5j/structure/6c5j.pdb | sabdab_dataset/6c5j/structure/chothia/6c5j.pdb | false | false | train |
6c5k | A | B | 0 | A | carbohydrate | GP1 | polysaccharide | SUGAR BINDING PROTEIN | 01/16/18 | S25-23 Fab in complex with Chlamydiaceae LPS (Crystal form 2) | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Haji-Ghassemi, O., Evans, S.V. | 1.75 | X-RAY DIFFRACTION | 0.218 | 0.188 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6c5k/abangle/6c5k.abangle | sabdab_dataset/6c5k/annotation/6c5k_A_VH.ann | sabdab_dataset/6c5k/annotation/6c5k_B_VL.ann | sabdab_dataset/6c5k/imgt/6c5k_A_H.ann | sabdab_dataset/6c5k/imgt/6c5k_B_L.ann | sabdab_dataset/6c5k/sequence/6c5k_raw.pdb | sabdab_dataset/6c5k/sequence/6c5k_A_VH.fa | sabdab_dataset/6c5k/sequence/6c5k_B_VL.fa | sabdab_dataset/6c5k/structure/6c5k.pdb | sabdab_dataset/6c5k/structure/chothia/6c5k.pdb | true | false | test |
6c5k | H | L | 0 | H | carbohydrate | GP1 | polysaccharide | SUGAR BINDING PROTEIN | 01/16/18 | S25-23 Fab in complex with Chlamydiaceae LPS (Crystal form 2) | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Haji-Ghassemi, O., Evans, S.V. | 1.75 | X-RAY DIFFRACTION | 0.218 | 0.188 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6c5k/abangle/6c5k.abangle | sabdab_dataset/6c5k/annotation/6c5k_H_VH.ann | sabdab_dataset/6c5k/annotation/6c5k_L_VL.ann | sabdab_dataset/6c5k/imgt/6c5k_H_H.ann | sabdab_dataset/6c5k/imgt/6c5k_L_L.ann | sabdab_dataset/6c5k/sequence/6c5k_raw.pdb | sabdab_dataset/6c5k/sequence/6c5k_H_VH.fa | sabdab_dataset/6c5k/sequence/6c5k_L_VL.fa | sabdab_dataset/6c5k/structure/6c5k.pdb | sabdab_dataset/6c5k/structure/chothia/6c5k.pdb | true | false | train |
6c5v | H | L | 0 | A | C | B | protein | protein | protein | NA | NA | NA | envelope glycoprotein h | glycoprotein 42 | envelope glycoprotein l | VIRAL PROTEIN | 01/16/18 | An anti-gH/gL antibody that neutralizes dual-tropic infection defines a site of vulnerability on Epstein-Barr virus | HUMAN HERPESVIRUS 4; HOMO SAPIENS | homo sapiens | homo sapiens | human herpesvirus 4 | human herpesvirus 4 | human herpesvirus 4 | Snijder, J., Ortego, M.S., Weidle, C., Stuart, A.B., Gray, M.A., McElrath, M.J., Pancera, M., Veesler, D., McGuire, A.T., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 4.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/6c5v/abangle/6c5v.abangle | sabdab_dataset/6c5v/annotation/6c5v_H_VH.ann | sabdab_dataset/6c5v/annotation/6c5v_L_VL.ann | sabdab_dataset/6c5v/imgt/6c5v_H_H.ann | sabdab_dataset/6c5v/imgt/6c5v_L_L.ann | sabdab_dataset/6c5v/sequence/6c5v_raw.pdb | sabdab_dataset/6c5v/sequence/6c5v_H_VH.fa | sabdab_dataset/6c5v/sequence/6c5v_L_VL.fa | sabdab_dataset/6c5v/structure/6c5v.pdb | sabdab_dataset/6c5v/structure/chothia/6c5v.pdb | false | false | train |
6c5w | C | null | 0 | B | protein | null | calcium uniporter | MEMBRANE PROTEIN | 01/17/18 | Crystal structure of the mitochondrial calcium uniporter | METARHIZIUM ACRIDUM (STRAIN CQMA 102); ESCHERICHIA COLI K-12 | escherichia coli k-12 | null | metarhizium acridum (strain cqma 102) | Fan, C., Fan, M., Fastman, N., Zhang, J., Feng, L. | 3.1001 | X-RAY DIFFRACTION | 0.299 | 0.256 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/6c5w/annotation/6c5w_C_VH.ann | null | sabdab_dataset/6c5w/imgt/6c5w_C_H.ann | null | sabdab_dataset/6c5w/sequence/6c5w_raw.pdb | sabdab_dataset/6c5w/sequence/6c5w_C_VH.fa | null | sabdab_dataset/6c5w/structure/6c5w.pdb | sabdab_dataset/6c5w/structure/chothia/6c5w.pdb | true | true | validation |
6c5w | E | null | 0 | A | protein | null | calcium uniporter | MEMBRANE PROTEIN | 01/17/18 | Crystal structure of the mitochondrial calcium uniporter | METARHIZIUM ACRIDUM (STRAIN CQMA 102); ESCHERICHIA COLI K-12 | escherichia coli k-12 | null | metarhizium acridum (strain cqma 102) | Fan, C., Fan, M., Fastman, N., Zhang, J., Feng, L. | 3.1001 | X-RAY DIFFRACTION | 0.299 | 0.256 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/6c5w/annotation/6c5w_E_VH.ann | null | sabdab_dataset/6c5w/imgt/6c5w_E_H.ann | null | sabdab_dataset/6c5w/sequence/6c5w_raw.pdb | sabdab_dataset/6c5w/sequence/6c5w_E_VH.fa | null | sabdab_dataset/6c5w/structure/6c5w.pdb | sabdab_dataset/6c5w/structure/chothia/6c5w.pdb | true | false | validation |
6c6x | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 01/19/18 | Crystal structure of Middle-East Respiratory Syndrome (MERS) coronavirus neutralizing antibody JC57-14 isolated from a vaccinated rhesus macaque. | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D. | 1.99 | X-RAY DIFFRACTION | 0.208 | 0.176 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6c6x/abangle/6c6x.abangle | sabdab_dataset/6c6x/annotation/6c6x_A_VH.ann | sabdab_dataset/6c6x/annotation/6c6x_B_VL.ann | sabdab_dataset/6c6x/imgt/6c6x_A_H.ann | sabdab_dataset/6c6x/imgt/6c6x_B_L.ann | sabdab_dataset/6c6x/sequence/6c6x_raw.pdb | sabdab_dataset/6c6x/sequence/6c6x_A_VH.fa | sabdab_dataset/6c6x/sequence/6c6x_B_VL.fa | sabdab_dataset/6c6x/structure/6c6x.pdb | sabdab_dataset/6c6x/structure/chothia/6c6x.pdb | true | false | train |
6c6x | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 01/19/18 | Crystal structure of Middle-East Respiratory Syndrome (MERS) coronavirus neutralizing antibody JC57-14 isolated from a vaccinated rhesus macaque. | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D. | 1.99 | X-RAY DIFFRACTION | 0.208 | 0.176 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6c6x/abangle/6c6x.abangle | sabdab_dataset/6c6x/annotation/6c6x_C_VH.ann | sabdab_dataset/6c6x/annotation/6c6x_D_VL.ann | sabdab_dataset/6c6x/imgt/6c6x_C_H.ann | sabdab_dataset/6c6x/imgt/6c6x_D_L.ann | sabdab_dataset/6c6x/sequence/6c6x_raw.pdb | sabdab_dataset/6c6x/sequence/6c6x_C_VH.fa | sabdab_dataset/6c6x/sequence/6c6x_D_VL.fa | sabdab_dataset/6c6x/structure/6c6x.pdb | sabdab_dataset/6c6x/structure/chothia/6c6x.pdb | true | false | train |
6c6x | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 01/19/18 | Crystal structure of Middle-East Respiratory Syndrome (MERS) coronavirus neutralizing antibody JC57-14 isolated from a vaccinated rhesus macaque. | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D. | 1.99 | X-RAY DIFFRACTION | 0.208 | 0.176 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6c6x/abangle/6c6x.abangle | sabdab_dataset/6c6x/annotation/6c6x_E_VH.ann | sabdab_dataset/6c6x/annotation/6c6x_F_VL.ann | sabdab_dataset/6c6x/imgt/6c6x_E_H.ann | sabdab_dataset/6c6x/imgt/6c6x_F_L.ann | sabdab_dataset/6c6x/sequence/6c6x_raw.pdb | sabdab_dataset/6c6x/sequence/6c6x_E_VH.fa | sabdab_dataset/6c6x/sequence/6c6x_F_VL.fa | sabdab_dataset/6c6x/structure/6c6x.pdb | sabdab_dataset/6c6x/structure/chothia/6c6x.pdb | true | false | train |
6c6x | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/19/18 | Crystal structure of Middle-East Respiratory Syndrome (MERS) coronavirus neutralizing antibody JC57-14 isolated from a vaccinated rhesus macaque. | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D. | 1.99 | X-RAY DIFFRACTION | 0.208 | 0.176 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6c6x/abangle/6c6x.abangle | sabdab_dataset/6c6x/annotation/6c6x_H_VH.ann | sabdab_dataset/6c6x/annotation/6c6x_L_VL.ann | sabdab_dataset/6c6x/imgt/6c6x_H_H.ann | sabdab_dataset/6c6x/imgt/6c6x_L_L.ann | sabdab_dataset/6c6x/sequence/6c6x_raw.pdb | sabdab_dataset/6c6x/sequence/6c6x_H_VH.fa | sabdab_dataset/6c6x/sequence/6c6x_L_VL.fa | sabdab_dataset/6c6x/structure/6c6x.pdb | sabdab_dataset/6c6x/structure/chothia/6c6x.pdb | true | false | test |
6c6y | A | B | 0 | S | protein | null | spike glycoprotein | IMMUNE SYSTEM | 01/19/18 | Crystal structure of Middle-East Respiratory Syndrome (MERS) coronavirus neutralizing antibody JC57-14 isolated from a vaccinated rhesus macaque in complex with MERS Receptor Binding Domain | MACACA MULATTA; BETACORONAVIRUS ENGLAND 1 | macaca mulatta | macaca mulatta | betacoronavirus england 1 | Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D. | 3.32 | X-RAY DIFFRACTION | 0.267 | 0.232 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6c6y/abangle/6c6y.abangle | sabdab_dataset/6c6y/annotation/6c6y_A_VH.ann | sabdab_dataset/6c6y/annotation/6c6y_B_VL.ann | sabdab_dataset/6c6y/imgt/6c6y_A_H.ann | sabdab_dataset/6c6y/imgt/6c6y_B_L.ann | sabdab_dataset/6c6y/sequence/6c6y_raw.pdb | sabdab_dataset/6c6y/sequence/6c6y_A_VH.fa | sabdab_dataset/6c6y/sequence/6c6y_B_VL.fa | sabdab_dataset/6c6y/structure/6c6y.pdb | sabdab_dataset/6c6y/structure/chothia/6c6y.pdb | false | false | train |
6c6y | H | L | 0 | R | protein | null | spike glycoprotein | IMMUNE SYSTEM | 01/19/18 | Crystal structure of Middle-East Respiratory Syndrome (MERS) coronavirus neutralizing antibody JC57-14 isolated from a vaccinated rhesus macaque in complex with MERS Receptor Binding Domain | MACACA MULATTA; BETACORONAVIRUS ENGLAND 1 | macaca mulatta | macaca mulatta | betacoronavirus england 1 | Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D. | 3.32 | X-RAY DIFFRACTION | 0.267 | 0.232 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6c6y/abangle/6c6y.abangle | sabdab_dataset/6c6y/annotation/6c6y_H_VH.ann | sabdab_dataset/6c6y/annotation/6c6y_L_VL.ann | sabdab_dataset/6c6y/imgt/6c6y_H_H.ann | sabdab_dataset/6c6y/imgt/6c6y_L_L.ann | sabdab_dataset/6c6y/sequence/6c6y_raw.pdb | sabdab_dataset/6c6y/sequence/6c6y_H_VH.fa | sabdab_dataset/6c6y/sequence/6c6y_L_VL.fa | sabdab_dataset/6c6y/structure/6c6y.pdb | sabdab_dataset/6c6y/structure/chothia/6c6y.pdb | false | false | train |
6c6z | C | D | 0 | A | protein | null | spike protein | IMMUNE SYSTEM | 01/19/18 | Crystal structure of potent neutralizing antibody CDC2-C2 in complex with MERS-CoV S1 RBD | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | middle east respiratory syndrome-relatedcoronavirus | Wang, N., McLellan, J.S. | 2.1 | X-RAY DIFFRACTION | 0.228 | 0.191 | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/6c6z/abangle/6c6z.abangle | sabdab_dataset/6c6z/annotation/6c6z_C_VH.ann | sabdab_dataset/6c6z/annotation/6c6z_D_VL.ann | sabdab_dataset/6c6z/imgt/6c6z_C_H.ann | sabdab_dataset/6c6z/imgt/6c6z_D_L.ann | sabdab_dataset/6c6z/sequence/6c6z_raw.pdb | sabdab_dataset/6c6z/sequence/6c6z_C_VH.fa | sabdab_dataset/6c6z/sequence/6c6z_D_VL.fa | sabdab_dataset/6c6z/structure/6c6z.pdb | sabdab_dataset/6c6z/structure/chothia/6c6z.pdb | true | false | train |
6c6z | H | L | 0 | B | protein | null | spike protein | IMMUNE SYSTEM | 01/19/18 | Crystal structure of potent neutralizing antibody CDC2-C2 in complex with MERS-CoV S1 RBD | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | middle east respiratory syndrome-relatedcoronavirus | Wang, N., McLellan, J.S. | 2.1 | X-RAY DIFFRACTION | 0.228 | 0.191 | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/6c6z/abangle/6c6z.abangle | sabdab_dataset/6c6z/annotation/6c6z_H_VH.ann | sabdab_dataset/6c6z/annotation/6c6z_L_VL.ann | sabdab_dataset/6c6z/imgt/6c6z_H_H.ann | sabdab_dataset/6c6z/imgt/6c6z_L_L.ann | sabdab_dataset/6c6z/sequence/6c6z_raw.pdb | sabdab_dataset/6c6z/sequence/6c6z_H_VH.fa | sabdab_dataset/6c6z/sequence/6c6z_L_VL.fa | sabdab_dataset/6c6z/structure/6c6z.pdb | sabdab_dataset/6c6z/structure/chothia/6c6z.pdb | true | false | train |
6c9u | H | L | 0 | A | protein | null | 6-deoxyerythronolide-b synthase erya2, modules 3 and 4 | TRANSFERASE/immune system | 01/28/18 | Crystal structure of [KS3][AT3] didomain from module 3 of 6-deoxyerthronolide B synthase in complex with antibody fragment (Fab) | SACCHAROPOLYSPORA ERYTHRAEA; HOMO SAPIENS | homo sapiens | homo sapiens | saccharopolyspora erythraea | Deis, L.N., Li, X., Mathews, I.I., Khosla, C. | 2.09 | X-RAY DIFFRACTION | 0.210 | 0.166 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/6c9u/abangle/6c9u.abangle | sabdab_dataset/6c9u/annotation/6c9u_H_VH.ann | sabdab_dataset/6c9u/annotation/6c9u_L_VL.ann | sabdab_dataset/6c9u/imgt/6c9u_H_H.ann | sabdab_dataset/6c9u/imgt/6c9u_L_L.ann | sabdab_dataset/6c9u/sequence/6c9u_raw.pdb | sabdab_dataset/6c9u/sequence/6c9u_H_VH.fa | sabdab_dataset/6c9u/sequence/6c9u_L_VL.fa | sabdab_dataset/6c9u/structure/6c9u.pdb | sabdab_dataset/6c9u/structure/chothia/6c9u.pdb | false | false | train |
6c9w | B | null | 0 | A | protein | null | lactose permease | MEMBRANE PROTEIN | 01/29/18 | Crystal Structure of a ligand bound LacY/Nanobody Complex | ESCHERICHIA COLI (STRAIN K12); LAMA GLAMA | lama glama | null | escherichia coli (strain k12) | Kumar, H., Finer-Moore, J.S., Jiang, X., Smirnova, I., Kasho, V., Pardon, E., Steyaert, J., Kaback, H.R., Stroud, R.M. | 3.0 | X-RAY DIFFRACTION | 0.295 | 0.276 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/6c9w/annotation/6c9w_B_VH.ann | null | sabdab_dataset/6c9w/imgt/6c9w_B_H.ann | null | sabdab_dataset/6c9w/sequence/6c9w_raw.pdb | sabdab_dataset/6c9w/sequence/6c9w_B_VH.fa | null | sabdab_dataset/6c9w/structure/6c9w.pdb | sabdab_dataset/6c9w/structure/chothia/6c9w.pdb | true | true | train |
6ca6 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 01/29/18 | Crystal structure of PCT64_35S, a broadly neutralizing anti-HIV antibody. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Murrell, S., Wilson, I.A. | 2.43 | X-RAY DIFFRACTION | 0.245 | 0.201 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6ca6/abangle/6ca6.abangle | sabdab_dataset/6ca6/annotation/6ca6_B_VH.ann | sabdab_dataset/6ca6/annotation/6ca6_A_VL.ann | sabdab_dataset/6ca6/imgt/6ca6_B_H.ann | sabdab_dataset/6ca6/imgt/6ca6_A_L.ann | sabdab_dataset/6ca6/sequence/6ca6_raw.pdb | sabdab_dataset/6ca6/sequence/6ca6_B_VH.fa | sabdab_dataset/6ca6/sequence/6ca6_A_VL.fa | sabdab_dataset/6ca6/structure/6ca6.pdb | sabdab_dataset/6ca6/structure/chothia/6ca6.pdb | false | false | train |
6ca6 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/29/18 | Crystal structure of PCT64_35S, a broadly neutralizing anti-HIV antibody. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Murrell, S., Wilson, I.A. | 2.43 | X-RAY DIFFRACTION | 0.245 | 0.201 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6ca6/abangle/6ca6.abangle | sabdab_dataset/6ca6/annotation/6ca6_H_VH.ann | sabdab_dataset/6ca6/annotation/6ca6_L_VL.ann | sabdab_dataset/6ca6/imgt/6ca6_H_H.ann | sabdab_dataset/6ca6/imgt/6ca6_L_L.ann | sabdab_dataset/6ca6/sequence/6ca6_raw.pdb | sabdab_dataset/6ca6/sequence/6ca6_H_VH.fa | sabdab_dataset/6ca6/sequence/6ca6_L_VL.fa | sabdab_dataset/6ca6/structure/6ca6.pdb | sabdab_dataset/6ca6/structure/chothia/6ca6.pdb | false | false | train |
6ca7 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/29/18 | Crystal structure of PCT64_13C, a strain specific anti-HIV antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Murrell, S., Wilson, I.A. | 1.643 | X-RAY DIFFRACTION | 0.190 | 0.169 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6ca7/abangle/6ca7.abangle | sabdab_dataset/6ca7/annotation/6ca7_H_VH.ann | sabdab_dataset/6ca7/annotation/6ca7_L_VL.ann | sabdab_dataset/6ca7/imgt/6ca7_H_H.ann | sabdab_dataset/6ca7/imgt/6ca7_L_L.ann | sabdab_dataset/6ca7/sequence/6ca7_raw.pdb | sabdab_dataset/6ca7/sequence/6ca7_H_VH.fa | sabdab_dataset/6ca7/sequence/6ca7_L_VL.fa | sabdab_dataset/6ca7/structure/6ca7.pdb | sabdab_dataset/6ca7/structure/chothia/6ca7.pdb | false | false | train |
6ca9 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 01/29/18 | Crystal structure of Fab PCT64_LMCA (SAR), the least mutated common ancestor of the HIV-1 broadly neutralizing antibody lineage PCT64 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Omorodion, O., Wilson, I.A. | 2.702 | X-RAY DIFFRACTION | 0.268 | 0.242 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6ca9/abangle/6ca9.abangle | sabdab_dataset/6ca9/annotation/6ca9_B_VH.ann | sabdab_dataset/6ca9/annotation/6ca9_A_VL.ann | sabdab_dataset/6ca9/imgt/6ca9_B_H.ann | sabdab_dataset/6ca9/imgt/6ca9_A_L.ann | sabdab_dataset/6ca9/sequence/6ca9_raw.pdb | sabdab_dataset/6ca9/sequence/6ca9_B_VH.fa | sabdab_dataset/6ca9/sequence/6ca9_A_VL.fa | sabdab_dataset/6ca9/structure/6ca9.pdb | sabdab_dataset/6ca9/structure/chothia/6ca9.pdb | true | false | train |
6ca9 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 01/29/18 | Crystal structure of Fab PCT64_LMCA (SAR), the least mutated common ancestor of the HIV-1 broadly neutralizing antibody lineage PCT64 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Omorodion, O., Wilson, I.A. | 2.702 | X-RAY DIFFRACTION | 0.268 | 0.242 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6ca9/abangle/6ca9.abangle | sabdab_dataset/6ca9/annotation/6ca9_D_VH.ann | sabdab_dataset/6ca9/annotation/6ca9_C_VL.ann | sabdab_dataset/6ca9/imgt/6ca9_D_H.ann | sabdab_dataset/6ca9/imgt/6ca9_C_L.ann | sabdab_dataset/6ca9/sequence/6ca9_raw.pdb | sabdab_dataset/6ca9/sequence/6ca9_D_VH.fa | sabdab_dataset/6ca9/sequence/6ca9_C_VL.fa | sabdab_dataset/6ca9/structure/6ca9.pdb | sabdab_dataset/6ca9/structure/chothia/6ca9.pdb | true | false | train |
6cbj | H | L | 0 | L | carbohydrate | NAG | polysaccharide | IMMUNE SYSTEM | 02/03/18 | Crystal Structure of DH270.3 Fab in complex with Man9 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Fera, D., Harrison, S.C. | 2.85 | X-RAY DIFFRACTION | 0.231 | 0.204 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/6cbj/abangle/6cbj.abangle | sabdab_dataset/6cbj/annotation/6cbj_H_VH.ann | sabdab_dataset/6cbj/annotation/6cbj_L_VL.ann | sabdab_dataset/6cbj/imgt/6cbj_H_H.ann | sabdab_dataset/6cbj/imgt/6cbj_L_L.ann | sabdab_dataset/6cbj/sequence/6cbj_raw.pdb | sabdab_dataset/6cbj/sequence/6cbj_H_VH.fa | sabdab_dataset/6cbj/sequence/6cbj_L_VL.fa | sabdab_dataset/6cbj/structure/6cbj.pdb | sabdab_dataset/6cbj/structure/chothia/6cbj.pdb | true | false | validation |
6cbp | A | a | 0 | P | peptide | null | man9-v3 glycopeptide | IMMUNE SYSTEM | 02/03/18 | Crystal structure of the single chain variable fragment of the DH270.6 bnAb in complex with the Man9-V3 glycopeptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | null | human immunodeficiency virus 1 | Fera, D., Harrison, S.C. | 2.17 | X-RAY DIFFRACTION | 0.278 | 0.221 | true | true | unknown | unknown | unknown | 0.000007 | -7.032545 | Unknown | null | TBD | sabdab_dataset/6cbp/abangle/6cbp.abangle | sabdab_dataset/6cbp/annotation/6cbp_A_VH.ann | sabdab_dataset/6cbp/annotation/6cbp_A_VL.ann | sabdab_dataset/6cbp/imgt/6cbp_A_H.ann | sabdab_dataset/6cbp/imgt/6cbp_A_L.ann | sabdab_dataset/6cbp/sequence/6cbp_raw.pdb | sabdab_dataset/6cbp/sequence/6cbp_A_VH.fa | sabdab_dataset/6cbp/sequence/6cbp_A_VL.fa | sabdab_dataset/6cbp/structure/6cbp.pdb | sabdab_dataset/6cbp/structure/chothia/6cbp.pdb | false | false | test |
6cbv | H | L | 0 | B | protein | null | bril | STRUCTURAL PROTEIN | 02/05/18 | Crystal strutcure of BRIL bound to an affinity matured synthetic antibody. | HOMO SAPIENS; ESCHERICHIA COLI | homo sapiens | homo sapiens | escherichia coli | Mukherjee, S., Skrobek, B., Kossiakoff, A.A. | 1.872 | X-RAY DIFFRACTION | 0.225 | 0.194 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cbv/abangle/6cbv.abangle | sabdab_dataset/6cbv/annotation/6cbv_H_VH.ann | sabdab_dataset/6cbv/annotation/6cbv_L_VL.ann | sabdab_dataset/6cbv/imgt/6cbv_H_H.ann | sabdab_dataset/6cbv/imgt/6cbv_L_L.ann | sabdab_dataset/6cbv/sequence/6cbv_raw.pdb | sabdab_dataset/6cbv/sequence/6cbv_H_VH.fa | sabdab_dataset/6cbv/sequence/6cbv_L_VL.fa | sabdab_dataset/6cbv/structure/6cbv.pdb | sabdab_dataset/6cbv/structure/chothia/6cbv.pdb | true | false | validation |
6ccb | D | E | 0 | C | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/06/18 | Crystal structure of 253-11 SOSIP trimer in complex with 10-1074 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Moyo, T., Ereno-Orbea, J., Dorfman, J., Julien, J.P. | 6.5 | X-RAY DIFFRACTION | 0.366 | 0.298 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/6ccb/abangle/6ccb.abangle | sabdab_dataset/6ccb/annotation/6ccb_D_VH.ann | sabdab_dataset/6ccb/annotation/6ccb_E_VL.ann | sabdab_dataset/6ccb/imgt/6ccb_D_H.ann | sabdab_dataset/6ccb/imgt/6ccb_E_L.ann | sabdab_dataset/6ccb/sequence/6ccb_raw.pdb | sabdab_dataset/6ccb/sequence/6ccb_D_VH.fa | sabdab_dataset/6ccb/sequence/6ccb_E_VL.fa | sabdab_dataset/6ccb/structure/6ccb.pdb | sabdab_dataset/6ccb/structure/chothia/6ccb.pdb | false | false | train |
6ccb | H | L | 0 | G | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/06/18 | Crystal structure of 253-11 SOSIP trimer in complex with 10-1074 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Moyo, T., Ereno-Orbea, J., Dorfman, J., Julien, J.P. | 6.5 | X-RAY DIFFRACTION | 0.366 | 0.298 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/6ccb/abangle/6ccb.abangle | sabdab_dataset/6ccb/annotation/6ccb_H_VH.ann | sabdab_dataset/6ccb/annotation/6ccb_L_VL.ann | sabdab_dataset/6ccb/imgt/6ccb_H_H.ann | sabdab_dataset/6ccb/imgt/6ccb_L_L.ann | sabdab_dataset/6ccb/sequence/6ccb_raw.pdb | sabdab_dataset/6ccb/sequence/6ccb_H_VH.fa | sabdab_dataset/6ccb/sequence/6ccb_L_VL.fa | sabdab_dataset/6ccb/structure/6ccb.pdb | sabdab_dataset/6ccb/structure/chothia/6ccb.pdb | false | false | train |
6cde | 3 | 4 | 0 | 1 | protein | null | glycoprotein 41 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cde/abangle/6cde.abangle | sabdab_dataset/6cde/annotation/6cde_3_VH.ann | sabdab_dataset/6cde/annotation/6cde_4_VL.ann | sabdab_dataset/6cde/imgt/6cde_3_H.ann | sabdab_dataset/6cde/imgt/6cde_4_L.ann | sabdab_dataset/6cde/sequence/6cde_raw.pdb | sabdab_dataset/6cde/sequence/6cde_3_VH.fa | sabdab_dataset/6cde/sequence/6cde_4_VL.fa | sabdab_dataset/6cde/structure/6cde.pdb | sabdab_dataset/6cde/structure/chothia/6cde.pdb | false | false | train |
6cde | 5 | 6 | 0 | 2 | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6cde/abangle/6cde.abangle | sabdab_dataset/6cde/annotation/6cde_5_VH.ann | sabdab_dataset/6cde/annotation/6cde_6_VL.ann | sabdab_dataset/6cde/imgt/6cde_5_H.ann | sabdab_dataset/6cde/imgt/6cde_6_L.ann | sabdab_dataset/6cde/sequence/6cde_raw.pdb | sabdab_dataset/6cde/sequence/6cde_5_VH.fa | sabdab_dataset/6cde/sequence/6cde_6_VL.fa | sabdab_dataset/6cde/structure/6cde.pdb | sabdab_dataset/6cde/structure/chothia/6cde.pdb | false | false | train |
6cde | 7 | 8 | 0 | 2 | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/6cde/abangle/6cde.abangle | sabdab_dataset/6cde/annotation/6cde_7_VH.ann | sabdab_dataset/6cde/annotation/6cde_8_VL.ann | sabdab_dataset/6cde/imgt/6cde_7_H.ann | sabdab_dataset/6cde/imgt/6cde_8_L.ann | sabdab_dataset/6cde/sequence/6cde_raw.pdb | sabdab_dataset/6cde/sequence/6cde_7_VH.fa | sabdab_dataset/6cde/sequence/6cde_8_VL.fa | sabdab_dataset/6cde/structure/6cde.pdb | sabdab_dataset/6cde/structure/chothia/6cde.pdb | false | false | train |
6cde | H | L | 0 | D | protein | null | glycoprotein 41 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cde/abangle/6cde.abangle | sabdab_dataset/6cde/annotation/6cde_H_VH.ann | sabdab_dataset/6cde/annotation/6cde_L_VL.ann | sabdab_dataset/6cde/imgt/6cde_H_H.ann | sabdab_dataset/6cde/imgt/6cde_L_L.ann | sabdab_dataset/6cde/sequence/6cde_raw.pdb | sabdab_dataset/6cde/sequence/6cde_H_VH.fa | sabdab_dataset/6cde/sequence/6cde_L_VL.fa | sabdab_dataset/6cde/structure/6cde.pdb | sabdab_dataset/6cde/structure/chothia/6cde.pdb | false | false | train |
6cde | M | N | 0 | C | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/6cde/abangle/6cde.abangle | sabdab_dataset/6cde/annotation/6cde_M_VH.ann | sabdab_dataset/6cde/annotation/6cde_N_VL.ann | sabdab_dataset/6cde/imgt/6cde_M_H.ann | sabdab_dataset/6cde/imgt/6cde_N_L.ann | sabdab_dataset/6cde/sequence/6cde_raw.pdb | sabdab_dataset/6cde/sequence/6cde_M_VH.fa | sabdab_dataset/6cde/sequence/6cde_N_VL.fa | sabdab_dataset/6cde/structure/6cde.pdb | sabdab_dataset/6cde/structure/chothia/6cde.pdb | false | false | train |
6cde | Q | R | 0 | C | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6cde/abangle/6cde.abangle | sabdab_dataset/6cde/annotation/6cde_Q_VH.ann | sabdab_dataset/6cde/annotation/6cde_R_VL.ann | sabdab_dataset/6cde/imgt/6cde_Q_H.ann | sabdab_dataset/6cde/imgt/6cde_R_L.ann | sabdab_dataset/6cde/sequence/6cde_raw.pdb | sabdab_dataset/6cde/sequence/6cde_Q_VH.fa | sabdab_dataset/6cde/sequence/6cde_R_VL.fa | sabdab_dataset/6cde/structure/6cde.pdb | sabdab_dataset/6cde/structure/chothia/6cde.pdb | false | false | train |
6cde | h | l | 0 | d | protein | null | unknown | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cde/abangle/6cde.abangle | sabdab_dataset/6cde/annotation/6cde_H_VH.ann | sabdab_dataset/6cde/annotation/6cde_L_VL.ann | sabdab_dataset/6cde/imgt/6cde_H_H.ann | sabdab_dataset/6cde/imgt/6cde_L_L.ann | sabdab_dataset/6cde/sequence/6cde_raw.pdb | sabdab_dataset/6cde/sequence/6cde_H_VH.fa | sabdab_dataset/6cde/sequence/6cde_L_VL.fa | sabdab_dataset/6cde/structure/6cde.pdb | sabdab_dataset/6cde/structure/chothia/6cde.pdb | false | false | train |
6cde | m | n | 0 | c | protein | null | unknown | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | false | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/6cde/abangle/6cde.abangle | sabdab_dataset/6cde/annotation/6cde_M_VH.ann | sabdab_dataset/6cde/annotation/6cde_N_VL.ann | sabdab_dataset/6cde/imgt/6cde_M_H.ann | sabdab_dataset/6cde/imgt/6cde_N_L.ann | sabdab_dataset/6cde/sequence/6cde_raw.pdb | sabdab_dataset/6cde/sequence/6cde_M_VH.fa | sabdab_dataset/6cde/sequence/6cde_N_VL.fa | sabdab_dataset/6cde/structure/6cde.pdb | sabdab_dataset/6cde/structure/chothia/6cde.pdb | false | false | train |
6cde | q | r | 0 | c | protein | null | unknown | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | false | unknown | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6cde/abangle/6cde.abangle | sabdab_dataset/6cde/annotation/6cde_Q_VH.ann | sabdab_dataset/6cde/annotation/6cde_R_VL.ann | sabdab_dataset/6cde/imgt/6cde_Q_H.ann | sabdab_dataset/6cde/imgt/6cde_R_L.ann | sabdab_dataset/6cde/sequence/6cde_raw.pdb | sabdab_dataset/6cde/sequence/6cde_Q_VH.fa | sabdab_dataset/6cde/sequence/6cde_R_VL.fa | sabdab_dataset/6cde/structure/6cde.pdb | sabdab_dataset/6cde/structure/chothia/6cde.pdb | false | false | train |
6cdi | 3 | 4 | 0 | A | protein | null | glycoprotein gp41 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cdi/abangle/6cdi.abangle | sabdab_dataset/6cdi/annotation/6cdi_3_VH.ann | sabdab_dataset/6cdi/annotation/6cdi_4_VL.ann | sabdab_dataset/6cdi/imgt/6cdi_3_H.ann | sabdab_dataset/6cdi/imgt/6cdi_4_L.ann | sabdab_dataset/6cdi/sequence/6cdi_raw.pdb | sabdab_dataset/6cdi/sequence/6cdi_3_VH.fa | sabdab_dataset/6cdi/sequence/6cdi_4_VL.fa | sabdab_dataset/6cdi/structure/6cdi.pdb | sabdab_dataset/6cdi/structure/chothia/6cdi.pdb | false | false | train |
6cdi | 5 | 6 | 0 | 2 | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/6cdi/abangle/6cdi.abangle | sabdab_dataset/6cdi/annotation/6cdi_5_VH.ann | sabdab_dataset/6cdi/annotation/6cdi_6_VL.ann | sabdab_dataset/6cdi/imgt/6cdi_5_H.ann | null | sabdab_dataset/6cdi/sequence/6cdi_raw.pdb | sabdab_dataset/6cdi/sequence/6cdi_5_VH.fa | sabdab_dataset/6cdi/sequence/6cdi_6_VL.fa | sabdab_dataset/6cdi/structure/6cdi.pdb | sabdab_dataset/6cdi/structure/chothia/6cdi.pdb | false | false | train |
6cdi | 8 | 7 | 0 | 2 | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6cdi/abangle/6cdi.abangle | sabdab_dataset/6cdi/annotation/6cdi_8_VH.ann | sabdab_dataset/6cdi/annotation/6cdi_7_VL.ann | null | null | sabdab_dataset/6cdi/sequence/6cdi_raw.pdb | sabdab_dataset/6cdi/sequence/6cdi_8_VH.fa | sabdab_dataset/6cdi/sequence/6cdi_7_VL.fa | sabdab_dataset/6cdi/structure/6cdi.pdb | sabdab_dataset/6cdi/structure/chothia/6cdi.pdb | false | false | train |
6cdi | H | L | 0 | D | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cdi/abangle/6cdi.abangle | sabdab_dataset/6cdi/annotation/6cdi_H_VH.ann | sabdab_dataset/6cdi/annotation/6cdi_L_VL.ann | null | null | sabdab_dataset/6cdi/sequence/6cdi_raw.pdb | sabdab_dataset/6cdi/sequence/6cdi_H_VH.fa | sabdab_dataset/6cdi/sequence/6cdi_L_VL.fa | sabdab_dataset/6cdi/structure/6cdi.pdb | sabdab_dataset/6cdi/structure/chothia/6cdi.pdb | false | false | train |
6cdi | M | N | 0 | C | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/6cdi/abangle/6cdi.abangle | sabdab_dataset/6cdi/annotation/6cdi_M_VH.ann | sabdab_dataset/6cdi/annotation/6cdi_N_VL.ann | null | null | sabdab_dataset/6cdi/sequence/6cdi_raw.pdb | sabdab_dataset/6cdi/sequence/6cdi_M_VH.fa | sabdab_dataset/6cdi/sequence/6cdi_N_VL.fa | sabdab_dataset/6cdi/structure/6cdi.pdb | sabdab_dataset/6cdi/structure/chothia/6cdi.pdb | false | false | train |
6cdi | Q | R | 0 | C | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6cdi/abangle/6cdi.abangle | sabdab_dataset/6cdi/annotation/6cdi_Q_VH.ann | sabdab_dataset/6cdi/annotation/6cdi_R_VL.ann | null | null | sabdab_dataset/6cdi/sequence/6cdi_raw.pdb | sabdab_dataset/6cdi/sequence/6cdi_Q_VH.fa | sabdab_dataset/6cdi/sequence/6cdi_R_VL.fa | sabdab_dataset/6cdi/structure/6cdi.pdb | sabdab_dataset/6cdi/structure/chothia/6cdi.pdb | false | false | train |
6cdi | h | l | 0 | c | protein | null | unknown | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cdi/abangle/6cdi.abangle | sabdab_dataset/6cdi/annotation/6cdi_H_VH.ann | sabdab_dataset/6cdi/annotation/6cdi_L_VL.ann | null | null | sabdab_dataset/6cdi/sequence/6cdi_raw.pdb | sabdab_dataset/6cdi/sequence/6cdi_H_VH.fa | sabdab_dataset/6cdi/sequence/6cdi_L_VL.fa | sabdab_dataset/6cdi/structure/6cdi.pdb | sabdab_dataset/6cdi/structure/chothia/6cdi.pdb | false | false | train |
6cdi | m | n | 0 | d | protein | null | unknown | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.6 | ELECTRON MICROSCOPY | null | null | false | false | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/6cdi/abangle/6cdi.abangle | sabdab_dataset/6cdi/annotation/6cdi_M_VH.ann | sabdab_dataset/6cdi/annotation/6cdi_N_VL.ann | null | null | sabdab_dataset/6cdi/sequence/6cdi_raw.pdb | sabdab_dataset/6cdi/sequence/6cdi_M_VH.fa | sabdab_dataset/6cdi/sequence/6cdi_N_VL.fa | sabdab_dataset/6cdi/structure/6cdi.pdb | sabdab_dataset/6cdi/structure/chothia/6cdi.pdb | false | false | train |
6cdi | q | r | 0 | d | protein | null | unknown | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.6 | ELECTRON MICROSCOPY | null | null | false | false | unknown | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6cdi/abangle/6cdi.abangle | sabdab_dataset/6cdi/annotation/6cdi_Q_VH.ann | sabdab_dataset/6cdi/annotation/6cdi_R_VL.ann | null | null | sabdab_dataset/6cdi/sequence/6cdi_raw.pdb | sabdab_dataset/6cdi/sequence/6cdi_Q_VH.fa | sabdab_dataset/6cdi/sequence/6cdi_R_VL.fa | sabdab_dataset/6cdi/structure/6cdi.pdb | sabdab_dataset/6cdi/structure/chothia/6cdi.pdb | false | false | test |
6cdm | A | B | 0 | C | peptide | null | hiv fusion peptide (512-519) | IMMUNE SYSTEM | 02/08/18 | Structure of vaccine-elicited HIV-1 neutralizing antibody vFP7.04 in complex with HIV-1 fusion peptide residue 512-519 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Xu, K., Liu, K., Kwong, P.D. | 2.408 | X-RAY DIFFRACTION | 0.222 | 0.184 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -12.406714 | Unknown | null | TBD | sabdab_dataset/6cdm/abangle/6cdm.abangle | sabdab_dataset/6cdm/annotation/6cdm_A_VH.ann | sabdab_dataset/6cdm/annotation/6cdm_B_VL.ann | sabdab_dataset/6cdm/imgt/6cdm_A_H.ann | sabdab_dataset/6cdm/imgt/6cdm_B_L.ann | sabdab_dataset/6cdm/sequence/6cdm_raw.pdb | sabdab_dataset/6cdm/sequence/6cdm_A_VH.fa | sabdab_dataset/6cdm/sequence/6cdm_B_VL.fa | sabdab_dataset/6cdm/structure/6cdm.pdb | sabdab_dataset/6cdm/structure/chothia/6cdm.pdb | true | false | train |
6cdm | D | E | 0 | F | peptide | null | hiv fusion peptide (512-519) | IMMUNE SYSTEM | 02/08/18 | Structure of vaccine-elicited HIV-1 neutralizing antibody vFP7.04 in complex with HIV-1 fusion peptide residue 512-519 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Xu, K., Liu, K., Kwong, P.D. | 2.408 | X-RAY DIFFRACTION | 0.222 | 0.184 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -12.406714 | Unknown | null | TBD | sabdab_dataset/6cdm/abangle/6cdm.abangle | sabdab_dataset/6cdm/annotation/6cdm_D_VH.ann | sabdab_dataset/6cdm/annotation/6cdm_E_VL.ann | sabdab_dataset/6cdm/imgt/6cdm_D_H.ann | sabdab_dataset/6cdm/imgt/6cdm_E_L.ann | sabdab_dataset/6cdm/sequence/6cdm_raw.pdb | sabdab_dataset/6cdm/sequence/6cdm_D_VH.fa | sabdab_dataset/6cdm/sequence/6cdm_E_VL.fa | sabdab_dataset/6cdm/structure/6cdm.pdb | sabdab_dataset/6cdm/structure/chothia/6cdm.pdb | true | false | train |
6cdo | A | B | 0 | C | peptide | null | hiv-1 fusion peptide 512-519 | IMMUNE SYSTEM | 02/08/18 | Structure of vaccine-elicited HIV-1 neutralizing antibody vFP16.02 in complex with HIV-1 fusion peptide residue 512-519 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Xu, K., Liu, K., Kwong, P.D. | 2.099 | X-RAY DIFFRACTION | 0.226 | 0.194 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -12.243673 | Unknown | null | TBD | sabdab_dataset/6cdo/abangle/6cdo.abangle | sabdab_dataset/6cdo/annotation/6cdo_A_VH.ann | sabdab_dataset/6cdo/annotation/6cdo_B_VL.ann | sabdab_dataset/6cdo/imgt/6cdo_A_H.ann | sabdab_dataset/6cdo/imgt/6cdo_B_L.ann | sabdab_dataset/6cdo/sequence/6cdo_raw.pdb | sabdab_dataset/6cdo/sequence/6cdo_A_VH.fa | sabdab_dataset/6cdo/sequence/6cdo_B_VL.fa | sabdab_dataset/6cdo/structure/6cdo.pdb | sabdab_dataset/6cdo/structure/chothia/6cdo.pdb | false | false | train |
6cdp | A | B | 0 | C | peptide | null | hiv-1 fusion peptide 512-519 | IMMUNE SYSTEM | 02/08/18 | Vaccine-elicited HIV-1 neutralizing antibody vFP20.01 in complex with HIV-1 fusion peptide residue 512-519 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Xu, K., Liu, K., Kwong, P.D. | 2.456 | X-RAY DIFFRACTION | 0.264 | 0.212 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -11.985097 | Unknown | null | TBD | sabdab_dataset/6cdp/abangle/6cdp.abangle | sabdab_dataset/6cdp/annotation/6cdp_A_VH.ann | sabdab_dataset/6cdp/annotation/6cdp_B_VL.ann | sabdab_dataset/6cdp/imgt/6cdp_A_H.ann | sabdab_dataset/6cdp/imgt/6cdp_B_L.ann | sabdab_dataset/6cdp/sequence/6cdp_raw.pdb | sabdab_dataset/6cdp/sequence/6cdp_A_VH.fa | sabdab_dataset/6cdp/sequence/6cdp_B_VL.fa | sabdab_dataset/6cdp/structure/6cdp.pdb | sabdab_dataset/6cdp/structure/chothia/6cdp.pdb | true | false | train |
6ce0 | D | E | 0 | B | protein | null | envelope glycoprotein gp160 | viral protein/immune system | 02/09/18 | Crystal structure of a HIV-1 clade B tier-3 isolate H078.14 UFO-BG Env trimer in complex with broadly neutralizing Fabs PGT124 and 35O22 at 4.6 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kumar, S., Sarkar, A., Wilson, I.A. | 4.602 | X-RAY DIFFRACTION | 0.341 | 0.313 | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/6ce0/abangle/6ce0.abangle | sabdab_dataset/6ce0/annotation/6ce0_D_VH.ann | sabdab_dataset/6ce0/annotation/6ce0_E_VL.ann | sabdab_dataset/6ce0/imgt/6ce0_D_H.ann | sabdab_dataset/6ce0/imgt/6ce0_E_L.ann | sabdab_dataset/6ce0/sequence/6ce0_raw.pdb | sabdab_dataset/6ce0/sequence/6ce0_D_VH.fa | sabdab_dataset/6ce0/sequence/6ce0_E_VL.fa | sabdab_dataset/6ce0/structure/6ce0.pdb | sabdab_dataset/6ce0/structure/chothia/6ce0.pdb | false | false | train |
6ce0 | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | viral protein/immune system | 02/09/18 | Crystal structure of a HIV-1 clade B tier-3 isolate H078.14 UFO-BG Env trimer in complex with broadly neutralizing Fabs PGT124 and 35O22 at 4.6 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kumar, S., Sarkar, A., Wilson, I.A. | 4.602 | X-RAY DIFFRACTION | 0.341 | 0.313 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/6ce0/abangle/6ce0.abangle | sabdab_dataset/6ce0/annotation/6ce0_H_VH.ann | sabdab_dataset/6ce0/annotation/6ce0_L_VL.ann | sabdab_dataset/6ce0/imgt/6ce0_H_H.ann | sabdab_dataset/6ce0/imgt/6ce0_L_L.ann | sabdab_dataset/6ce0/sequence/6ce0_raw.pdb | sabdab_dataset/6ce0/sequence/6ce0_H_VH.fa | sabdab_dataset/6ce0/sequence/6ce0_L_VL.fa | sabdab_dataset/6ce0/structure/6ce0.pdb | sabdab_dataset/6ce0/structure/chothia/6ce0.pdb | false | false | train |
6cez | H | L | 0 | P | peptide | null | hiv-1 gp120 v2 peptide con b | IMMUNE SYSTEM | 02/13/18 | Crystal Structure of Rabbit Anti-HIV-1 gp120 V2 Fab 16C2 in complex with V2 peptide ConB | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | Kong, X., Pan, R. | 2.399 | X-RAY DIFFRACTION | 0.296 | 0.237 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cez/abangle/6cez.abangle | sabdab_dataset/6cez/annotation/6cez_H_VH.ann | sabdab_dataset/6cez/annotation/6cez_L_VL.ann | sabdab_dataset/6cez/imgt/6cez_H_H.ann | sabdab_dataset/6cez/imgt/6cez_L_L.ann | sabdab_dataset/6cez/sequence/6cez_raw.pdb | sabdab_dataset/6cez/sequence/6cez_H_VH.fa | sabdab_dataset/6cez/sequence/6cez_L_VL.fa | sabdab_dataset/6cez/structure/6cez.pdb | sabdab_dataset/6cez/structure/chothia/6cez.pdb | true | false | test |
6cf2 | A | B | 0 | F | G | protein | nucleic-acid | NA | NA | protein rev | rna (35-mer) | RNA BINDING PROTEIN/RNA | 02/13/18 | Crystal structure of HIV-1 Rev (residues 1-93)-RNA aptamer complex | ORYCTOLAGUS CUNICULUS; HUMAN IMMUNODEFICIENCY VIRUS 1; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | synthetic construct | Eren, E., Dearborn, A.D., Wingfield, P.T. | 3.0 | X-RAY DIFFRACTION | 0.241 | 0.208 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cf2/abangle/6cf2.abangle | sabdab_dataset/6cf2/annotation/6cf2_A_VH.ann | sabdab_dataset/6cf2/annotation/6cf2_B_VL.ann | sabdab_dataset/6cf2/imgt/6cf2_A_H.ann | sabdab_dataset/6cf2/imgt/6cf2_B_L.ann | sabdab_dataset/6cf2/sequence/6cf2_raw.pdb | sabdab_dataset/6cf2/sequence/6cf2_A_VH.fa | sabdab_dataset/6cf2/sequence/6cf2_B_VL.fa | sabdab_dataset/6cf2/structure/6cf2.pdb | sabdab_dataset/6cf2/structure/chothia/6cf2.pdb | true | true | validation |
6ch7 | D | E | 0 | B | protein | null | envelope glycoprotein gp41 | IMMUNE SYSTEM | 02/22/18 | XFEL crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 3.8 | X-RAY DIFFRACTION | 0.262 | 0.232 | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/6ch7/abangle/6ch7.abangle | sabdab_dataset/6ch7/annotation/6ch7_D_VH.ann | sabdab_dataset/6ch7/annotation/6ch7_E_VL.ann | sabdab_dataset/6ch7/imgt/6ch7_D_H.ann | sabdab_dataset/6ch7/imgt/6ch7_E_L.ann | sabdab_dataset/6ch7/sequence/6ch7_raw.pdb | sabdab_dataset/6ch7/sequence/6ch7_D_VH.fa | sabdab_dataset/6ch7/sequence/6ch7_E_VL.fa | sabdab_dataset/6ch7/structure/6ch7.pdb | sabdab_dataset/6ch7/structure/chothia/6ch7.pdb | false | false | train |
6ch7 | Q | R | 0 | G | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 02/22/18 | XFEL crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 3.8 | X-RAY DIFFRACTION | 0.262 | 0.232 | false | true | unknown | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/6ch7/abangle/6ch7.abangle | sabdab_dataset/6ch7/annotation/6ch7_Q_VH.ann | sabdab_dataset/6ch7/annotation/6ch7_R_VL.ann | sabdab_dataset/6ch7/imgt/6ch7_Q_H.ann | sabdab_dataset/6ch7/imgt/6ch7_R_L.ann | sabdab_dataset/6ch7/sequence/6ch7_raw.pdb | sabdab_dataset/6ch7/sequence/6ch7_Q_VH.fa | sabdab_dataset/6ch7/sequence/6ch7_R_VL.fa | sabdab_dataset/6ch7/structure/6ch7.pdb | sabdab_dataset/6ch7/structure/chothia/6ch7.pdb | false | false | train |
6ch8 | D | E | 0 | B | protein | null | envelope glycoprotein gp41 | IMMUNE SYSTEM | 02/22/18 | Crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 4.1 | X-RAY DIFFRACTION | 0.274 | 0.229 | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/6ch8/abangle/6ch8.abangle | sabdab_dataset/6ch8/annotation/6ch8_D_VH.ann | sabdab_dataset/6ch8/annotation/6ch8_E_VL.ann | sabdab_dataset/6ch8/imgt/6ch8_D_H.ann | sabdab_dataset/6ch8/imgt/6ch8_E_L.ann | sabdab_dataset/6ch8/sequence/6ch8_raw.pdb | sabdab_dataset/6ch8/sequence/6ch8_D_VH.fa | sabdab_dataset/6ch8/sequence/6ch8_E_VL.fa | sabdab_dataset/6ch8/structure/6ch8.pdb | sabdab_dataset/6ch8/structure/chothia/6ch8.pdb | false | false | train |
6ch8 | Q | R | 0 | G | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 02/22/18 | Crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 4.1 | X-RAY DIFFRACTION | 0.274 | 0.229 | false | true | unknown | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/6ch8/abangle/6ch8.abangle | sabdab_dataset/6ch8/annotation/6ch8_Q_VH.ann | sabdab_dataset/6ch8/annotation/6ch8_R_VL.ann | sabdab_dataset/6ch8/imgt/6ch8_Q_H.ann | sabdab_dataset/6ch8/imgt/6ch8_R_L.ann | sabdab_dataset/6ch8/sequence/6ch8_raw.pdb | sabdab_dataset/6ch8/sequence/6ch8_Q_VH.fa | sabdab_dataset/6ch8/sequence/6ch8_R_VL.fa | sabdab_dataset/6ch8/structure/6ch8.pdb | sabdab_dataset/6ch8/structure/chothia/6ch8.pdb | false | false | train |
6ch9 | D | E | 0 | B | protein | null | envelope glycoprotein gp41 | IMMUNE SYSTEM | 02/22/18 | Crystal structure of a natively-glycosylated B41 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 4.85 | X-RAY DIFFRACTION | 0.292 | 0.285 | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/6ch9/abangle/6ch9.abangle | sabdab_dataset/6ch9/annotation/6ch9_D_VH.ann | sabdab_dataset/6ch9/annotation/6ch9_E_VL.ann | sabdab_dataset/6ch9/imgt/6ch9_D_H.ann | sabdab_dataset/6ch9/imgt/6ch9_E_L.ann | sabdab_dataset/6ch9/sequence/6ch9_raw.pdb | sabdab_dataset/6ch9/sequence/6ch9_D_VH.fa | sabdab_dataset/6ch9/sequence/6ch9_E_VL.fa | sabdab_dataset/6ch9/structure/6ch9.pdb | sabdab_dataset/6ch9/structure/chothia/6ch9.pdb | true | false | train |
6ch9 | Q | R | 0 | G | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 02/22/18 | Crystal structure of a natively-glycosylated B41 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 4.85 | X-RAY DIFFRACTION | 0.292 | 0.285 | false | true | unknown | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/6ch9/abangle/6ch9.abangle | sabdab_dataset/6ch9/annotation/6ch9_Q_VH.ann | sabdab_dataset/6ch9/annotation/6ch9_R_VL.ann | sabdab_dataset/6ch9/imgt/6ch9_Q_H.ann | sabdab_dataset/6ch9/imgt/6ch9_R_L.ann | sabdab_dataset/6ch9/sequence/6ch9_raw.pdb | sabdab_dataset/6ch9/sequence/6ch9_Q_VH.fa | sabdab_dataset/6ch9/sequence/6ch9_R_VL.fa | sabdab_dataset/6ch9/structure/6ch9.pdb | sabdab_dataset/6ch9/structure/chothia/6ch9.pdb | true | false | train |
6chb | D | E | 0 | G | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 02/22/18 | Crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and IOMA | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 6.801 | X-RAY DIFFRACTION | 0.417 | 0.318 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/6chb/abangle/6chb.abangle | sabdab_dataset/6chb/annotation/6chb_D_VH.ann | sabdab_dataset/6chb/annotation/6chb_E_VL.ann | sabdab_dataset/6chb/imgt/6chb_D_H.ann | sabdab_dataset/6chb/imgt/6chb_E_L.ann | sabdab_dataset/6chb/sequence/6chb_raw.pdb | sabdab_dataset/6chb/sequence/6chb_D_VH.fa | sabdab_dataset/6chb/sequence/6chb_E_VL.fa | sabdab_dataset/6chb/structure/6chb.pdb | sabdab_dataset/6chb/structure/chothia/6chb.pdb | true | false | test |
6chb | I | L | 0 | F | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 02/22/18 | Crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and IOMA | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 6.801 | X-RAY DIFFRACTION | 0.417 | 0.318 | false | true | unknown | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/6chb/abangle/6chb.abangle | sabdab_dataset/6chb/annotation/6chb_I_VH.ann | sabdab_dataset/6chb/annotation/6chb_L_VL.ann | sabdab_dataset/6chb/imgt/6chb_I_H.ann | sabdab_dataset/6chb/imgt/6chb_L_L.ann | sabdab_dataset/6chb/sequence/6chb_raw.pdb | sabdab_dataset/6chb/sequence/6chb_I_VH.fa | sabdab_dataset/6chb/sequence/6chb_L_VL.fa | sabdab_dataset/6chb/structure/6chb.pdb | sabdab_dataset/6chb/structure/chothia/6chb.pdb | true | false | train |
6chb | J | K | 0 | G | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 02/22/18 | Crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and IOMA | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 6.801 | X-RAY DIFFRACTION | 0.417 | 0.318 | false | true | unknown | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/6chb/abangle/6chb.abangle | sabdab_dataset/6chb/annotation/6chb_J_VH.ann | sabdab_dataset/6chb/annotation/6chb_K_VL.ann | sabdab_dataset/6chb/imgt/6chb_J_H.ann | sabdab_dataset/6chb/imgt/6chb_K_L.ann | sabdab_dataset/6chb/sequence/6chb_raw.pdb | sabdab_dataset/6chb/sequence/6chb_J_VH.fa | sabdab_dataset/6chb/sequence/6chb_K_VL.fa | sabdab_dataset/6chb/structure/6chb.pdb | sabdab_dataset/6chb/structure/chothia/6chb.pdb | true | false | train |
6chb | M | N | 0 | F | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 02/22/18 | Crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and IOMA | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 6.801 | X-RAY DIFFRACTION | 0.417 | 0.318 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/6chb/abangle/6chb.abangle | sabdab_dataset/6chb/annotation/6chb_M_VH.ann | sabdab_dataset/6chb/annotation/6chb_N_VL.ann | sabdab_dataset/6chb/imgt/6chb_M_H.ann | sabdab_dataset/6chb/imgt/6chb_N_L.ann | sabdab_dataset/6chb/sequence/6chb_raw.pdb | sabdab_dataset/6chb/sequence/6chb_M_VH.fa | sabdab_dataset/6chb/sequence/6chb_N_VL.fa | sabdab_dataset/6chb/structure/6chb.pdb | sabdab_dataset/6chb/structure/chothia/6chb.pdb | true | false | test |
6chb | O | P | 0 | H | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 02/22/18 | Crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and IOMA | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 6.801 | X-RAY DIFFRACTION | 0.417 | 0.318 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/6chb/abangle/6chb.abangle | sabdab_dataset/6chb/annotation/6chb_O_VH.ann | sabdab_dataset/6chb/annotation/6chb_P_VL.ann | sabdab_dataset/6chb/imgt/6chb_O_H.ann | sabdab_dataset/6chb/imgt/6chb_P_L.ann | sabdab_dataset/6chb/sequence/6chb_raw.pdb | sabdab_dataset/6chb/sequence/6chb_O_VH.fa | sabdab_dataset/6chb/sequence/6chb_P_VL.fa | sabdab_dataset/6chb/structure/6chb.pdb | sabdab_dataset/6chb/structure/chothia/6chb.pdb | true | false | train |
6chb | Q | R | 0 | H | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 02/22/18 | Crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and IOMA | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Barnes, C.O., Bjorkman, P.J. | 6.801 | X-RAY DIFFRACTION | 0.417 | 0.318 | false | true | unknown | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/6chb/abangle/6chb.abangle | sabdab_dataset/6chb/annotation/6chb_Q_VH.ann | sabdab_dataset/6chb/annotation/6chb_R_VL.ann | sabdab_dataset/6chb/imgt/6chb_Q_H.ann | sabdab_dataset/6chb/imgt/6chb_R_L.ann | sabdab_dataset/6chb/sequence/6chb_raw.pdb | sabdab_dataset/6chb/sequence/6chb_Q_VH.fa | sabdab_dataset/6chb/sequence/6chb_R_VL.fa | sabdab_dataset/6chb/structure/6chb.pdb | sabdab_dataset/6chb/structure/chothia/6chb.pdb | true | false | train |
6cjk | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/18 | Anti HIV Fab 10A | ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | null | Hangartner, L., Ward, A.B., Wilson, I.A., Oyen, D. | 1.795 | X-RAY DIFFRACTION | 0.206 | 0.163 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cjk/abangle/6cjk.abangle | sabdab_dataset/6cjk/annotation/6cjk_B_VH.ann | sabdab_dataset/6cjk/annotation/6cjk_A_VL.ann | sabdab_dataset/6cjk/imgt/6cjk_B_H.ann | sabdab_dataset/6cjk/imgt/6cjk_A_L.ann | sabdab_dataset/6cjk/sequence/6cjk_raw.pdb | sabdab_dataset/6cjk/sequence/6cjk_B_VH.fa | sabdab_dataset/6cjk/sequence/6cjk_A_VL.fa | sabdab_dataset/6cjk/structure/6cjk.pdb | sabdab_dataset/6cjk/structure/chothia/6cjk.pdb | true | false | validation |
6cjk | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/18 | Anti HIV Fab 10A | ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | null | Hangartner, L., Ward, A.B., Wilson, I.A., Oyen, D. | 1.795 | X-RAY DIFFRACTION | 0.206 | 0.163 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cjk/abangle/6cjk.abangle | sabdab_dataset/6cjk/annotation/6cjk_D_VH.ann | sabdab_dataset/6cjk/annotation/6cjk_C_VL.ann | sabdab_dataset/6cjk/imgt/6cjk_D_H.ann | sabdab_dataset/6cjk/imgt/6cjk_C_L.ann | sabdab_dataset/6cjk/sequence/6cjk_raw.pdb | sabdab_dataset/6cjk/sequence/6cjk_D_VH.fa | sabdab_dataset/6cjk/sequence/6cjk_C_VL.fa | sabdab_dataset/6cjk/structure/6cjk.pdb | sabdab_dataset/6cjk/structure/chothia/6cjk.pdb | true | false | train |
6ck8 | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 02/27/18 | Crystal structure of anti-influenza single-domain llama antibody SD38 | LAMA GLAMA | lama glama | null | null | Zhu, X., Wilson, I.A. | 2.05 | X-RAY DIFFRACTION | 0.211 | 0.177 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/6ck8/annotation/6ck8_A_VH.ann | null | sabdab_dataset/6ck8/imgt/6ck8_A_H.ann | null | sabdab_dataset/6ck8/sequence/6ck8_raw.pdb | sabdab_dataset/6ck8/sequence/6ck8_A_VH.fa | null | sabdab_dataset/6ck8/structure/6ck8.pdb | sabdab_dataset/6ck8/structure/chothia/6ck8.pdb | false | false | train |
6ck8 | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 02/27/18 | Crystal structure of anti-influenza single-domain llama antibody SD38 | LAMA GLAMA | lama glama | null | null | Zhu, X., Wilson, I.A. | 2.05 | X-RAY DIFFRACTION | 0.211 | 0.177 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/6ck8/annotation/6ck8_B_VH.ann | null | sabdab_dataset/6ck8/imgt/6ck8_B_H.ann | null | sabdab_dataset/6ck8/sequence/6ck8_raw.pdb | sabdab_dataset/6ck8/sequence/6ck8_B_VH.fa | null | sabdab_dataset/6ck8/structure/6ck8.pdb | sabdab_dataset/6ck8/structure/chothia/6ck8.pdb | false | false | train |
6ck8 | C | null | 0 | null | null | null | null | IMMUNE SYSTEM | 02/27/18 | Crystal structure of anti-influenza single-domain llama antibody SD38 | LAMA GLAMA | lama glama | null | null | Zhu, X., Wilson, I.A. | 2.05 | X-RAY DIFFRACTION | 0.211 | 0.177 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/6ck8/annotation/6ck8_C_VH.ann | null | sabdab_dataset/6ck8/imgt/6ck8_C_H.ann | null | sabdab_dataset/6ck8/sequence/6ck8_raw.pdb | sabdab_dataset/6ck8/sequence/6ck8_C_VH.fa | null | sabdab_dataset/6ck8/structure/6ck8.pdb | sabdab_dataset/6ck8/structure/chothia/6ck8.pdb | false | false | train |
6ck9 | D | E | 0 | B | protein | null | gp41 ectodomain of envelope glycoprotein gp160 | VIRAL PROTEIN | 02/27/18 | Crystal Structure of HIV-1 ConC_Base0 Prefusion Env Trimer in Complex with Human Antibody Fragment 3H109L and 35O22 variants at 3.5 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.714 | X-RAY DIFFRACTION | 0.288 | 0.248 | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/6ck9/abangle/6ck9.abangle | sabdab_dataset/6ck9/annotation/6ck9_D_VH.ann | sabdab_dataset/6ck9/annotation/6ck9_E_VL.ann | null | null | sabdab_dataset/6ck9/sequence/6ck9_raw.pdb | sabdab_dataset/6ck9/sequence/6ck9_D_VH.fa | sabdab_dataset/6ck9/sequence/6ck9_E_VL.fa | sabdab_dataset/6ck9/structure/6ck9.pdb | sabdab_dataset/6ck9/structure/chothia/6ck9.pdb | false | false | train |
6ck9 | H | L | 0 | G | protein | null | gp120 of envelope glycoprotein gp160 | VIRAL PROTEIN | 02/27/18 | Crystal Structure of HIV-1 ConC_Base0 Prefusion Env Trimer in Complex with Human Antibody Fragment 3H109L and 35O22 variants at 3.5 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.714 | X-RAY DIFFRACTION | 0.288 | 0.248 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/6ck9/abangle/6ck9.abangle | sabdab_dataset/6ck9/annotation/6ck9_H_VH.ann | sabdab_dataset/6ck9/annotation/6ck9_L_VL.ann | null | null | sabdab_dataset/6ck9/sequence/6ck9_raw.pdb | sabdab_dataset/6ck9/sequence/6ck9_H_VH.fa | sabdab_dataset/6ck9/sequence/6ck9_L_VL.fa | sabdab_dataset/6ck9/structure/6ck9.pdb | sabdab_dataset/6ck9/structure/chothia/6ck9.pdb | false | false | train |
6cm3 | K | J | 0 | D | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN | 03/02/18 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wang, H., Bjorkman, P.J. | 3.54 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6cm3/abangle/6cm3.abangle | sabdab_dataset/6cm3/annotation/6cm3_K_VH.ann | sabdab_dataset/6cm3/annotation/6cm3_J_VL.ann | sabdab_dataset/6cm3/imgt/6cm3_K_H.ann | sabdab_dataset/6cm3/imgt/6cm3_J_L.ann | sabdab_dataset/6cm3/sequence/6cm3_raw.pdb | sabdab_dataset/6cm3/sequence/6cm3_K_VH.fa | sabdab_dataset/6cm3/sequence/6cm3_J_VL.fa | sabdab_dataset/6cm3/structure/6cm3.pdb | sabdab_dataset/6cm3/structure/chothia/6cm3.pdb | false | false | train |
6cm3 | M | L | 0 | F | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN | 03/02/18 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wang, H., Bjorkman, P.J. | 3.54 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6cm3/abangle/6cm3.abangle | sabdab_dataset/6cm3/annotation/6cm3_M_VH.ann | sabdab_dataset/6cm3/annotation/6cm3_L_VL.ann | sabdab_dataset/6cm3/imgt/6cm3_M_H.ann | sabdab_dataset/6cm3/imgt/6cm3_L_L.ann | sabdab_dataset/6cm3/sequence/6cm3_raw.pdb | sabdab_dataset/6cm3/sequence/6cm3_M_VH.fa | sabdab_dataset/6cm3/sequence/6cm3_L_VL.fa | sabdab_dataset/6cm3/structure/6cm3.pdb | sabdab_dataset/6cm3/structure/chothia/6cm3.pdb | false | false | train |
6cm3 | O | N | 0 | E | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN | 03/02/18 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wang, H., Bjorkman, P.J. | 3.54 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6cm3/abangle/6cm3.abangle | sabdab_dataset/6cm3/annotation/6cm3_O_VH.ann | sabdab_dataset/6cm3/annotation/6cm3_N_VL.ann | sabdab_dataset/6cm3/imgt/6cm3_O_H.ann | sabdab_dataset/6cm3/imgt/6cm3_N_L.ann | sabdab_dataset/6cm3/sequence/6cm3_raw.pdb | sabdab_dataset/6cm3/sequence/6cm3_O_VH.fa | sabdab_dataset/6cm3/sequence/6cm3_N_VL.fa | sabdab_dataset/6cm3/structure/6cm3.pdb | sabdab_dataset/6cm3/structure/chothia/6cm3.pdb | false | false | test |
6cm3 | P | Q | 0 | B | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN | 03/02/18 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wang, H., Bjorkman, P.J. | 3.54 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cm3/abangle/6cm3.abangle | sabdab_dataset/6cm3/annotation/6cm3_P_VH.ann | sabdab_dataset/6cm3/annotation/6cm3_Q_VL.ann | sabdab_dataset/6cm3/imgt/6cm3_P_H.ann | sabdab_dataset/6cm3/imgt/6cm3_Q_L.ann | sabdab_dataset/6cm3/sequence/6cm3_raw.pdb | sabdab_dataset/6cm3/sequence/6cm3_P_VH.fa | sabdab_dataset/6cm3/sequence/6cm3_Q_VL.fa | sabdab_dataset/6cm3/structure/6cm3.pdb | sabdab_dataset/6cm3/structure/chothia/6cm3.pdb | false | false | train |
6cm3 | R | S | 0 | A | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN | 03/02/18 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wang, H., Bjorkman, P.J. | 3.54 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cm3/abangle/6cm3.abangle | sabdab_dataset/6cm3/annotation/6cm3_R_VH.ann | sabdab_dataset/6cm3/annotation/6cm3_S_VL.ann | sabdab_dataset/6cm3/imgt/6cm3_R_H.ann | sabdab_dataset/6cm3/imgt/6cm3_S_L.ann | sabdab_dataset/6cm3/sequence/6cm3_raw.pdb | sabdab_dataset/6cm3/sequence/6cm3_R_VH.fa | sabdab_dataset/6cm3/sequence/6cm3_S_VL.fa | sabdab_dataset/6cm3/structure/6cm3.pdb | sabdab_dataset/6cm3/structure/chothia/6cm3.pdb | false | false | train |
6cm3 | T | U | 0 | C | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN | 03/02/18 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wang, H., Bjorkman, P.J. | 3.54 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cm3/abangle/6cm3.abangle | sabdab_dataset/6cm3/annotation/6cm3_T_VH.ann | sabdab_dataset/6cm3/annotation/6cm3_U_VL.ann | sabdab_dataset/6cm3/imgt/6cm3_T_H.ann | sabdab_dataset/6cm3/imgt/6cm3_U_L.ann | sabdab_dataset/6cm3/sequence/6cm3_raw.pdb | sabdab_dataset/6cm3/sequence/6cm3_T_VH.fa | sabdab_dataset/6cm3/sequence/6cm3_U_VL.fa | sabdab_dataset/6cm3/structure/6cm3.pdb | sabdab_dataset/6cm3/structure/chothia/6cm3.pdb | false | false | train |
6cmg | C | B | 0 | A | protein | null | glycoprotein g | VIRAL PROTEIN/IMMUNE SYSTEM | 03/05/18 | Crystal Structure of the Hendra Virus Attachment G Glycoprotein Bound to a Potent Cross-Reactive Neutralizing Human Monoclonal Antibody m102.3 | HENDRA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | hendra virus | Xu, K., Nikolov, D. | 2.7 | X-RAY DIFFRACTION | 0.275 | 0.229 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -10.316754 | SPR | null | TBD | sabdab_dataset/6cmg/abangle/6cmg.abangle | sabdab_dataset/6cmg/annotation/6cmg_C_VH.ann | sabdab_dataset/6cmg/annotation/6cmg_B_VL.ann | sabdab_dataset/6cmg/imgt/6cmg_C_H.ann | sabdab_dataset/6cmg/imgt/6cmg_B_L.ann | sabdab_dataset/6cmg/sequence/6cmg_raw.pdb | sabdab_dataset/6cmg/sequence/6cmg_C_VH.fa | sabdab_dataset/6cmg/sequence/6cmg_B_VL.fa | sabdab_dataset/6cmg/structure/6cmg.pdb | sabdab_dataset/6cmg/structure/chothia/6cmg.pdb | true | false | train |
6cmi | D | C | 0 | B | protein | null | glycoprotein g | VIRAL PROTEIN/IMMUNE SYSTEM | 03/05/18 | Crystal Structure of the Hendra Virus Attachment G Glycoprotein Bound to a Potent Cross-Reactive Neutralizing Human Monoclonal Antibody m102.3 | HENDRA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | hendra virus | Xu, K., Nikolov, D. | 2.72 | X-RAY DIFFRACTION | 0.246 | 0.196 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/6cmi/abangle/6cmi.abangle | sabdab_dataset/6cmi/annotation/6cmi_D_VH.ann | sabdab_dataset/6cmi/annotation/6cmi_C_VL.ann | sabdab_dataset/6cmi/imgt/6cmi_D_H.ann | sabdab_dataset/6cmi/imgt/6cmi_C_L.ann | sabdab_dataset/6cmi/sequence/6cmi_raw.pdb | sabdab_dataset/6cmi/sequence/6cmi_D_VH.fa | sabdab_dataset/6cmi/sequence/6cmi_C_VL.fa | sabdab_dataset/6cmi/structure/6cmi.pdb | sabdab_dataset/6cmi/structure/chothia/6cmi.pdb | false | false | train |
6cmo | H | L | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN | 03/05/18 | Rhodopsin-Gi complex | ESCHERICHIA COLI; HOMO SAPIENS; RATTUS NORVEGICUS; BOS TAURUS; UNIDENTIFIED | unidentified | unidentified | homo sapiens | rattus norvegicus | Kang, Y., Xu, H.E. | 4.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cmo/abangle/6cmo.abangle | sabdab_dataset/6cmo/annotation/6cmo_H_VH.ann | sabdab_dataset/6cmo/annotation/6cmo_L_VL.ann | sabdab_dataset/6cmo/imgt/6cmo_H_H.ann | sabdab_dataset/6cmo/imgt/6cmo_L_L.ann | sabdab_dataset/6cmo/sequence/6cmo_raw.pdb | sabdab_dataset/6cmo/sequence/6cmo_H_VH.fa | sabdab_dataset/6cmo/sequence/6cmo_L_VL.fa | sabdab_dataset/6cmo/structure/6cmo.pdb | sabdab_dataset/6cmo/structure/chothia/6cmo.pdb | false | false | test |
6cnj | G | F | 0 | C | protein | null | neuronal acetylcholine receptor subunit beta-2 | TRANSPORT PROTEIN | 03/08/18 | Structure of the 2alpha3beta stiochiometry of the human Alpha4Beta2 nicotinic receptor | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Walsh Jr, R.M., Roh, S.H., Gharpure, A., Morales-Perez, C.L., Teng, J., Hibbs, R.E. | 3.4 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cnj/abangle/6cnj.abangle | sabdab_dataset/6cnj/annotation/6cnj_G_VH.ann | sabdab_dataset/6cnj/annotation/6cnj_F_VL.ann | sabdab_dataset/6cnj/imgt/6cnj_G_H.ann | sabdab_dataset/6cnj/imgt/6cnj_F_L.ann | sabdab_dataset/6cnj/sequence/6cnj_raw.pdb | sabdab_dataset/6cnj/sequence/6cnj_G_VH.fa | sabdab_dataset/6cnj/sequence/6cnj_F_VL.fa | sabdab_dataset/6cnj/structure/6cnj.pdb | sabdab_dataset/6cnj/structure/chothia/6cnj.pdb | false | false | train |
6cnj | I | H | 0 | B | A | protein | protein | NA | NA | neuronal acetylcholine receptor subunit beta-2 | neuronal acetylcholine receptor subunit alpha-4 | TRANSPORT PROTEIN | 03/08/18 | Structure of the 2alpha3beta stiochiometry of the human Alpha4Beta2 nicotinic receptor | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | homo sapiens | Walsh Jr, R.M., Roh, S.H., Gharpure, A., Morales-Perez, C.L., Teng, J., Hibbs, R.E. | 3.4 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cnj/abangle/6cnj.abangle | sabdab_dataset/6cnj/annotation/6cnj_I_VH.ann | sabdab_dataset/6cnj/annotation/6cnj_H_VL.ann | sabdab_dataset/6cnj/imgt/6cnj_I_H.ann | sabdab_dataset/6cnj/imgt/6cnj_H_L.ann | sabdab_dataset/6cnj/sequence/6cnj_raw.pdb | sabdab_dataset/6cnj/sequence/6cnj_I_VH.fa | sabdab_dataset/6cnj/sequence/6cnj_H_VL.fa | sabdab_dataset/6cnj/structure/6cnj.pdb | sabdab_dataset/6cnj/structure/chothia/6cnj.pdb | false | false | train |
6cnj | K | J | 0 | E | D | protein | protein | NA | NA | neuronal acetylcholine receptor subunit beta-2 | neuronal acetylcholine receptor subunit alpha-4 | TRANSPORT PROTEIN | 03/08/18 | Structure of the 2alpha3beta stiochiometry of the human Alpha4Beta2 nicotinic receptor | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | homo sapiens | Walsh Jr, R.M., Roh, S.H., Gharpure, A., Morales-Perez, C.L., Teng, J., Hibbs, R.E. | 3.4 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cnj/abangle/6cnj.abangle | sabdab_dataset/6cnj/annotation/6cnj_K_VH.ann | sabdab_dataset/6cnj/annotation/6cnj_J_VL.ann | sabdab_dataset/6cnj/imgt/6cnj_K_H.ann | sabdab_dataset/6cnj/imgt/6cnj_J_L.ann | sabdab_dataset/6cnj/sequence/6cnj_raw.pdb | sabdab_dataset/6cnj/sequence/6cnj_K_VH.fa | sabdab_dataset/6cnj/sequence/6cnj_J_VL.fa | sabdab_dataset/6cnj/structure/6cnj.pdb | sabdab_dataset/6cnj/structure/chothia/6cnj.pdb | false | false | test |
6cnk | G | F | 0 | C | B | protein | protein | NA | NA | neuronal acetylcholine receptor subunit beta-2 | neuronal acetylcholine receptor subunit alpha-4 | TRANSPORT PROTEIN | 03/08/18 | Structure of the 3alpha2beta stiochiometry of the human Alpha4Beta2 nicotinic receptor | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | homo sapiens | Walsh Jr, R.M., Roh, S.H., Gharpure, A., Morales-Perez, C.L., Hibbs, R.E. | 3.7 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cnk/abangle/6cnk.abangle | sabdab_dataset/6cnk/annotation/6cnk_G_VH.ann | sabdab_dataset/6cnk/annotation/6cnk_F_VL.ann | sabdab_dataset/6cnk/imgt/6cnk_G_H.ann | sabdab_dataset/6cnk/imgt/6cnk_F_L.ann | sabdab_dataset/6cnk/sequence/6cnk_raw.pdb | sabdab_dataset/6cnk/sequence/6cnk_G_VH.fa | sabdab_dataset/6cnk/sequence/6cnk_F_VL.fa | sabdab_dataset/6cnk/structure/6cnk.pdb | sabdab_dataset/6cnk/structure/chothia/6cnk.pdb | false | false | train |
6cnk | K | J | 0 | E | D | protein | protein | NA | NA | neuronal acetylcholine receptor subunit beta-2 | neuronal acetylcholine receptor subunit alpha-4 | TRANSPORT PROTEIN | 03/08/18 | Structure of the 3alpha2beta stiochiometry of the human Alpha4Beta2 nicotinic receptor | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | homo sapiens | Walsh Jr, R.M., Roh, S.H., Gharpure, A., Morales-Perez, C.L., Hibbs, R.E. | 3.7 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cnk/abangle/6cnk.abangle | sabdab_dataset/6cnk/annotation/6cnk_K_VH.ann | sabdab_dataset/6cnk/annotation/6cnk_J_VL.ann | sabdab_dataset/6cnk/imgt/6cnk_K_H.ann | sabdab_dataset/6cnk/imgt/6cnk_J_L.ann | sabdab_dataset/6cnk/sequence/6cnk_raw.pdb | sabdab_dataset/6cnk/sequence/6cnk_K_VH.fa | sabdab_dataset/6cnk/sequence/6cnk_J_VL.fa | sabdab_dataset/6cnk/structure/6cnk.pdb | sabdab_dataset/6cnk/structure/chothia/6cnk.pdb | false | false | train |
6cnr | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/08/18 | aducanumab apo Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Arndt, J.W. | 2.09 | X-RAY DIFFRACTION | 0.239 | 0.211 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cnr/abangle/6cnr.abangle | sabdab_dataset/6cnr/annotation/6cnr_H_VH.ann | sabdab_dataset/6cnr/annotation/6cnr_L_VL.ann | sabdab_dataset/6cnr/imgt/6cnr_H_H.ann | sabdab_dataset/6cnr/imgt/6cnr_L_L.ann | sabdab_dataset/6cnr/sequence/6cnr_raw.pdb | sabdab_dataset/6cnr/sequence/6cnr_H_VH.fa | sabdab_dataset/6cnr/sequence/6cnr_L_VL.fa | sabdab_dataset/6cnr/structure/6cnr.pdb | sabdab_dataset/6cnr/structure/chothia/6cnr.pdb | false | false | train |
6cnv | C | null | 0 | A | protein | null | hemagglutinin | VIRAL PROTEIN | 03/09/18 | INFLUENZA B/BRISBANE HEMAGGLUTININ FAB CR9115 SD84H COMPLEX | INFLUENZA B VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; SYNTHETIC CONSTRUCT; HOMO SAPIENS | synthetic construct | null | influenza b virus | Luo, J., Obmolova, G. | 4.1 | X-RAY DIFFRACTION | 0.276 | 0.241 | false | true | IGHV3 | null | null | null | null | null | null | null | sabdab_dataset/6cnv/abangle/6cnv.abangle | sabdab_dataset/6cnv/annotation/6cnv_C_VH.ann | null | sabdab_dataset/6cnv/imgt/6cnv_C_H.ann | null | sabdab_dataset/6cnv/sequence/6cnv_raw.pdb | sabdab_dataset/6cnv/sequence/6cnv_C_VH.fa | null | sabdab_dataset/6cnv/structure/6cnv.pdb | sabdab_dataset/6cnv/structure/chothia/6cnv.pdb | false | false | train |
6cnv | H | L | 0 | B | protein | null | envelope glycoprotein | VIRAL PROTEIN | 03/09/18 | INFLUENZA B/BRISBANE HEMAGGLUTININ FAB CR9115 SD84H COMPLEX | INFLUENZA B VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; SYNTHETIC CONSTRUCT; HOMO SAPIENS | homo sapiens | homo sapiens | influenza b virus, human immunodeficiency virus1 | Luo, J., Obmolova, G. | 4.1 | X-RAY DIFFRACTION | 0.276 | 0.241 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/6cnv/abangle/6cnv.abangle | sabdab_dataset/6cnv/annotation/6cnv_H_VH.ann | sabdab_dataset/6cnv/annotation/6cnv_L_VL.ann | sabdab_dataset/6cnv/imgt/6cnv_H_H.ann | sabdab_dataset/6cnv/imgt/6cnv_L_L.ann | sabdab_dataset/6cnv/sequence/6cnv_raw.pdb | sabdab_dataset/6cnv/sequence/6cnv_H_VH.fa | sabdab_dataset/6cnv/sequence/6cnv_L_VL.fa | sabdab_dataset/6cnv/structure/6cnv.pdb | sabdab_dataset/6cnv/structure/chothia/6cnv.pdb | false | false | validation |
6cnw | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 03/09/18 | STRUCTURE OF HUMANIZED SINGLE DOMAIN ANTIBODY SD84 | HYBRID | hybrid | null | null | Luo, J., Obmolova, O. | 0.92 | X-RAY DIFFRACTION | 0.139 | 0.126 | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/6cnw/annotation/6cnw_A_VH.ann | null | sabdab_dataset/6cnw/imgt/6cnw_A_H.ann | null | sabdab_dataset/6cnw/sequence/6cnw_raw.pdb | sabdab_dataset/6cnw/sequence/6cnw_A_VH.fa | null | sabdab_dataset/6cnw/structure/6cnw.pdb | sabdab_dataset/6cnw/structure/chothia/6cnw.pdb | true | false | validation |
6co3 | H | L | 0 | Q | peptide | null | ala-glu-phe-arg-his-asp | IMMUNE SYSTEM | 03/10/18 | aducanumab abeta complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Arndt, J.W. | 2.384 | X-RAY DIFFRACTION | 0.235 | 0.181 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6co3/abangle/6co3.abangle | sabdab_dataset/6co3/annotation/6co3_H_VH.ann | sabdab_dataset/6co3/annotation/6co3_L_VL.ann | sabdab_dataset/6co3/imgt/6co3_H_H.ann | sabdab_dataset/6co3/imgt/6co3_L_L.ann | sabdab_dataset/6co3/sequence/6co3_raw.pdb | sabdab_dataset/6co3/sequence/6co3_H_VH.fa | sabdab_dataset/6co3/sequence/6co3_L_VL.fa | sabdab_dataset/6co3/structure/6co3.pdb | sabdab_dataset/6co3/structure/chothia/6co3.pdb | false | false | train |
6cr1 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/16/18 | adalimumab EFab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Arndt, J.W. | 1.521 | X-RAY DIFFRACTION | 0.179 | 0.153 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/6cr1/abangle/6cr1.abangle | sabdab_dataset/6cr1/annotation/6cr1_H_VH.ann | sabdab_dataset/6cr1/annotation/6cr1_L_VL.ann | sabdab_dataset/6cr1/imgt/6cr1_H_H.ann | sabdab_dataset/6cr1/imgt/6cr1_L_L.ann | sabdab_dataset/6cr1/sequence/6cr1_raw.pdb | sabdab_dataset/6cr1/sequence/6cr1_H_VH.fa | sabdab_dataset/6cr1/sequence/6cr1_L_VL.fa | sabdab_dataset/6cr1/structure/6cr1.pdb | sabdab_dataset/6cr1/structure/chothia/6cr1.pdb | true | false | train |
6crk | H | h | 0 | A | B | G | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | SIGNALING PROTEIN | 03/19/18 | Heterotrimeric G-protein in complex with an antibody fragment | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | homo sapiens | homo sapiens | Maeda, S., Dawson, R., Kobilka, B. | 2.0 | X-RAY DIFFRACTION | 0.210 | 0.175 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/6crk/abangle/6crk.abangle | sabdab_dataset/6crk/annotation/6crk_H_VH.ann | sabdab_dataset/6crk/annotation/6crk_H_VL.ann | sabdab_dataset/6crk/imgt/6crk_H_H.ann | sabdab_dataset/6crk/imgt/6crk_H_L.ann | sabdab_dataset/6crk/sequence/6crk_raw.pdb | sabdab_dataset/6crk/sequence/6crk_H_VH.fa | sabdab_dataset/6crk/sequence/6crk_H_VL.fa | sabdab_dataset/6crk/structure/6crk.pdb | sabdab_dataset/6crk/structure/chothia/6crk.pdb | true | true | validation |
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