pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
365 values
r_factor
stringclasses
358 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
abangle
stringlengths
40
40
annotation_H
stringlengths
44
44
annotation_L
stringlengths
44
44
imgt_H
stringlengths
37
37
imgt_L
stringlengths
37
37
sequence_raw
stringlengths
41
41
sequence_H
stringlengths
41
41
sequence_L
stringlengths
41
41
structure
stringlengths
38
38
structure_chothia
stringlengths
46
46
in_nr_set
bool
2 classes
curated_quality_dataset
bool
2 classes
split
stringclasses
3 values
6hjy
H
null
0
C
protein
null
cys-loop ligand-gated ion channel
MEMBRANE PROTEIN
09/04/18
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) Delta8 truncation mutant in complex with nanobody 72
DICKEYA CHRYSANTHEMI; LAMA GLAMA
lama glama
null
dickeya chrysanthemi
Spurny, R., Govaerts, C., Evans, G.L., Pardon, E., Steyaert, J., Ulens, C.
2.78
X-RAY DIFFRACTION
0.233
0.225
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6hjy/annotation/6hjy_H_VH.ann
null
sabdab_dataset/6hjy/imgt/6hjy_H_H.ann
null
sabdab_dataset/6hjy/sequence/6hjy_raw.pdb
sabdab_dataset/6hjy/sequence/6hjy_H_VH.fa
null
sabdab_dataset/6hjy/structure/6hjy.pdb
sabdab_dataset/6hjy/structure/chothia/6hjy.pdb
true
false
validation
6hjy
I
null
0
D
protein
null
cys-loop ligand-gated ion channel
MEMBRANE PROTEIN
09/04/18
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) Delta8 truncation mutant in complex with nanobody 72
DICKEYA CHRYSANTHEMI; LAMA GLAMA
lama glama
null
dickeya chrysanthemi
Spurny, R., Govaerts, C., Evans, G.L., Pardon, E., Steyaert, J., Ulens, C.
2.78
X-RAY DIFFRACTION
0.233
0.225
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6hjy/annotation/6hjy_I_VH.ann
null
sabdab_dataset/6hjy/imgt/6hjy_I_H.ann
null
sabdab_dataset/6hjy/sequence/6hjy_raw.pdb
sabdab_dataset/6hjy/sequence/6hjy_I_VH.fa
null
sabdab_dataset/6hjy/structure/6hjy.pdb
sabdab_dataset/6hjy/structure/chothia/6hjy.pdb
true
false
train
6hjy
J
null
0
E
protein
null
cys-loop ligand-gated ion channel
MEMBRANE PROTEIN
09/04/18
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) Delta8 truncation mutant in complex with nanobody 72
DICKEYA CHRYSANTHEMI; LAMA GLAMA
lama glama
null
dickeya chrysanthemi
Spurny, R., Govaerts, C., Evans, G.L., Pardon, E., Steyaert, J., Ulens, C.
2.78
X-RAY DIFFRACTION
0.233
0.225
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6hjy/annotation/6hjy_J_VH.ann
null
sabdab_dataset/6hjy/imgt/6hjy_J_H.ann
null
sabdab_dataset/6hjy/sequence/6hjy_raw.pdb
sabdab_dataset/6hjy/sequence/6hjy_J_VH.fa
null
sabdab_dataset/6hjy/structure/6hjy.pdb
sabdab_dataset/6hjy/structure/chothia/6hjy.pdb
true
false
test
6hkg
A
B
0
null
null
null
null
IMMUNE SYSTEM
09/06/18
Structure of FISW84 Fab Fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Benton, D.J., Rosenthal, P.B.
1.87
X-RAY DIFFRACTION
0.200
0.183
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/6hkg/abangle/6hkg.abangle
sabdab_dataset/6hkg/annotation/6hkg_A_VH.ann
sabdab_dataset/6hkg/annotation/6hkg_B_VL.ann
sabdab_dataset/6hkg/imgt/6hkg_A_H.ann
sabdab_dataset/6hkg/imgt/6hkg_B_L.ann
sabdab_dataset/6hkg/sequence/6hkg_raw.pdb
sabdab_dataset/6hkg/sequence/6hkg_A_VH.fa
sabdab_dataset/6hkg/sequence/6hkg_B_VL.fa
sabdab_dataset/6hkg/structure/6hkg.pdb
sabdab_dataset/6hkg/structure/chothia/6hkg.pdb
true
false
test
6hkg
C
D
0
null
null
null
null
IMMUNE SYSTEM
09/06/18
Structure of FISW84 Fab Fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Benton, D.J., Rosenthal, P.B.
1.87
X-RAY DIFFRACTION
0.200
0.183
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/6hkg/abangle/6hkg.abangle
sabdab_dataset/6hkg/annotation/6hkg_C_VH.ann
sabdab_dataset/6hkg/annotation/6hkg_D_VL.ann
sabdab_dataset/6hkg/imgt/6hkg_C_H.ann
sabdab_dataset/6hkg/imgt/6hkg_D_L.ann
sabdab_dataset/6hkg/sequence/6hkg_raw.pdb
sabdab_dataset/6hkg/sequence/6hkg_C_VH.fa
sabdab_dataset/6hkg/sequence/6hkg_D_VL.fa
sabdab_dataset/6hkg/structure/6hkg.pdb
sabdab_dataset/6hkg/structure/chothia/6hkg.pdb
true
false
train
6hug
G
null
0
A | E
protein | protein
NA | NA
gamma-aminobutyric acid receptor subunit alpha-1 | gamma-aminobutyric acid receptor subunit beta-3
MEMBRANE PROTEIN
10/08/18
CryoEM structure of human full-length alpha1beta3gamma2L GABA(A)R in complex with picrotoxin and megabody Mb38.
BOS TAURUS; HOMO SAPIENS; LAMA GLAMA
lama glama
null
bos taurus | homo sapiens
Masiulis, S., Desai, R., Uchanski, T., Serna Martin, I., Laverty, D., Karia, D., Malinauskas, T., Jasenko, Z., Pardon, E., Kotecha, A., Steyaert, J., Miller, K.W., Aricescu, A.R.
3.1
ELECTRON MICROSCOPY
null
null
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/6hug/annotation/6hug_G_VH.ann
null
null
null
sabdab_dataset/6hug/sequence/6hug_raw.pdb
sabdab_dataset/6hug/sequence/6hug_G_VH.fa
null
sabdab_dataset/6hug/structure/6hug.pdb
sabdab_dataset/6hug/structure/chothia/6hug.pdb
false
false
train
6huj
G
null
0
A | E
protein | protein
NA | NA
gamma-aminobutyric acid receptor subunit alpha-1,gamma-aminobutyric acid receptor subunit alpha-1 | gamma-aminobutyric acid receptor subunit beta-3
MEMBRANE PROTEIN
10/08/18
CryoEM structure of human full-length heteromeric alpha1beta3gamma2L GABA(A)R in complex with picrotoxin, GABA and megabody Mb38.
BOS TAURUS; HOMO SAPIENS; LAMA GLAMA
lama glama
null
bos taurus, homo sapiens | homo sapiens
Masiulis, S., Desai, R., Uchanski, T., Serna Martin, I., Laverty, D., Karia, D., Malinauskas, T., Jasenko, Z., Pardon, E., Kotecha, A., Steyaert, J., Miller, K.W., Aricescu, A.R.
3.04
ELECTRON MICROSCOPY
null
null
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/6huj/annotation/6huj_G_VH.ann
null
null
null
sabdab_dataset/6huj/sequence/6huj_raw.pdb
sabdab_dataset/6huj/sequence/6huj_G_VH.fa
null
sabdab_dataset/6huj/structure/6huj.pdb
sabdab_dataset/6huj/structure/chothia/6huj.pdb
false
false
train
6huk
G
null
0
A | E
protein | protein
NA | NA
gamma-aminobutyric acid receptor subunit alpha-1,gamma-aminobutyric acid receptor subunit alpha-1 | gamma-aminobutyric acid receptor subunit beta-3
MEMBRANE PROTEIN
10/08/18
CryoEM structure of human full-length alpha1beta3gamma2L GABA(A)R in complex with bicuculline and megabody Mb38.
BOS TAURUS; HOMO SAPIENS; LAMA GLAMA
lama glama
null
bos taurus, homo sapiens | homo sapiens
Masiulis, S., Desai, R., Uchanski, T., Serna Martin, I., Laverty, D., Karia, D., Malinauskas, T., Jasenko, Z., Pardon, E., Kotecha, A., Steyaert, J., Miller, K.W., Aricescu, A.R.
3.69
ELECTRON MICROSCOPY
null
null
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/6huk/annotation/6huk_G_VH.ann
null
null
null
sabdab_dataset/6huk/sequence/6huk_raw.pdb
sabdab_dataset/6huk/sequence/6huk_G_VH.fa
null
sabdab_dataset/6huk/structure/6huk.pdb
sabdab_dataset/6huk/structure/chothia/6huk.pdb
false
false
validation
6huo
G
null
0
A | E
protein | protein
NA | NA
gamma-aminobutyric acid receptor subunit alpha-1,gamma-aminobutyric acid receptor subunit alpha-1 | gamma-aminobutyric acid receptor subunit beta-3
MEMBRANE PROTEIN
10/09/18
CryoEM structure of human full-length heteromeric alpha1beta3gamma2L GABA(A)R in complex with alprazolam (Xanax), GABA and megabody Mb38.
BOS TAURUS; HOMO SAPIENS; LAMA GLAMA
lama glama
null
bos taurus, homo sapiens | homo sapiens
Masiulis, S., Desai, R., Uchanski, T., Serna Martin, I., Laverty, D., Karia, D., Malinauskas, T., Jasenko, Z., Pardon, E., Kotecha, A., Steyaert, J., Miller, K.W., Aricescu, A.R.
3.26
ELECTRON MICROSCOPY
null
null
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/6huo/annotation/6huo_G_VH.ann
null
null
null
sabdab_dataset/6huo/sequence/6huo_raw.pdb
sabdab_dataset/6huo/sequence/6huo_G_VH.fa
null
sabdab_dataset/6huo/structure/6huo.pdb
sabdab_dataset/6huo/structure/chothia/6huo.pdb
false
false
train
6hup
G
null
0
A | E
protein | protein
NA | NA
gamma-aminobutyric acid receptor subunit alpha-1,gamma-aminobutyric acid receptor subunit alpha-1 | gamma-aminobutyric acid receptor subunit beta-3
MEMBRANE PROTEIN
10/09/18
CryoEM structure of human full-length alpha1beta3gamma2L GABA(A)R in complex with diazepam (Valium), GABA and megabody Mb38.
BOS TAURUS; HOMO SAPIENS; LAMA GLAMA
lama glama
null
bos taurus, homo sapiens | homo sapiens
Masiulis, S., Desai, R., Uchanski, T., Serna Martin, I., Laverty, D., Karia, D., Malinauskas, T., Jasenko, Z., Pardon, E., Kotecha, A., Steyaert, J., Miller, K.W., Aricescu, A.R.
3.58
ELECTRON MICROSCOPY
null
null
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/6hup/annotation/6hup_G_VH.ann
null
null
null
sabdab_dataset/6hup/sequence/6hup_raw.pdb
sabdab_dataset/6hup/sequence/6hup_G_VH.fa
null
sabdab_dataset/6hup/structure/6hup.pdb
sabdab_dataset/6hup/structure/chothia/6hup.pdb
false
false
train
6hx4
H
L
0
B
protein
null
alpha-1-antitrypsin
PROTEIN BINDING
10/15/18
Fab fragment of a native monomer-selective antibody in complex with alpha-1-antitrypsin
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Elliston, E.L.K., Miranda, E., Perez, J., Jagger, A.M., Lomas, D.A., Irving, J.A.
2.95
X-RAY DIFFRACTION
0.277
0.231
false
false
IGHV5
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/6hx4/abangle/6hx4.abangle
sabdab_dataset/6hx4/annotation/6hx4_H_VH.ann
sabdab_dataset/6hx4/annotation/6hx4_L_VL.ann
sabdab_dataset/6hx4/imgt/6hx4_H_H.ann
sabdab_dataset/6hx4/imgt/6hx4_L_L.ann
sabdab_dataset/6hx4/sequence/6hx4_raw.pdb
sabdab_dataset/6hx4/sequence/6hx4_H_VH.fa
sabdab_dataset/6hx4/sequence/6hx4_L_VL.fa
sabdab_dataset/6hx4/structure/6hx4.pdb
sabdab_dataset/6hx4/structure/chothia/6hx4.pdb
true
false
validation
6hx4
I
M
0
A
protein
null
alpha-1-antitrypsin
PROTEIN BINDING
10/15/18
Fab fragment of a native monomer-selective antibody in complex with alpha-1-antitrypsin
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Elliston, E.L.K., Miranda, E., Perez, J., Jagger, A.M., Lomas, D.A., Irving, J.A.
2.95
X-RAY DIFFRACTION
0.277
0.231
false
false
IGHV5
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/6hx4/abangle/6hx4.abangle
sabdab_dataset/6hx4/annotation/6hx4_I_VH.ann
sabdab_dataset/6hx4/annotation/6hx4_M_VL.ann
sabdab_dataset/6hx4/imgt/6hx4_I_H.ann
sabdab_dataset/6hx4/imgt/6hx4_M_L.ann
sabdab_dataset/6hx4/sequence/6hx4_raw.pdb
sabdab_dataset/6hx4/sequence/6hx4_I_VH.fa
sabdab_dataset/6hx4/sequence/6hx4_M_VL.fa
sabdab_dataset/6hx4/structure/6hx4.pdb
sabdab_dataset/6hx4/structure/chothia/6hx4.pdb
true
false
train
6hxw
C
D
0
B
protein
null
5'-nucleotidase
IMMUNE SYSTEM
10/18/18
structure of human CD73 in complex with antibody IPH53
HOMO SAPIENS; SYNTHETIC CONSTRUCT
synthetic construct
synthetic construct
homo sapiens
Roussel, A., Amigues, B.
2.78
X-RAY DIFFRACTION
0.232
0.192
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6hxw/abangle/6hxw.abangle
sabdab_dataset/6hxw/annotation/6hxw_C_VH.ann
sabdab_dataset/6hxw/annotation/6hxw_D_VL.ann
sabdab_dataset/6hxw/imgt/6hxw_C_H.ann
sabdab_dataset/6hxw/imgt/6hxw_D_L.ann
sabdab_dataset/6hxw/sequence/6hxw_raw.pdb
sabdab_dataset/6hxw/sequence/6hxw_C_VH.fa
sabdab_dataset/6hxw/sequence/6hxw_D_VL.fa
sabdab_dataset/6hxw/structure/6hxw.pdb
sabdab_dataset/6hxw/structure/chothia/6hxw.pdb
true
false
train
6hxw
H
L
0
A
protein
null
5'-nucleotidase
IMMUNE SYSTEM
10/18/18
structure of human CD73 in complex with antibody IPH53
HOMO SAPIENS; SYNTHETIC CONSTRUCT
synthetic construct
synthetic construct
homo sapiens
Roussel, A., Amigues, B.
2.78
X-RAY DIFFRACTION
0.232
0.192
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6hxw/abangle/6hxw.abangle
sabdab_dataset/6hxw/annotation/6hxw_H_VH.ann
sabdab_dataset/6hxw/annotation/6hxw_L_VL.ann
sabdab_dataset/6hxw/imgt/6hxw_H_H.ann
sabdab_dataset/6hxw/imgt/6hxw_L_L.ann
sabdab_dataset/6hxw/sequence/6hxw_raw.pdb
sabdab_dataset/6hxw/sequence/6hxw_H_VH.fa
sabdab_dataset/6hxw/sequence/6hxw_L_VL.fa
sabdab_dataset/6hxw/structure/6hxw.pdb
sabdab_dataset/6hxw/structure/chothia/6hxw.pdb
true
false
test
6i04
C
D
0
B
protein
null
hepatocyte growth factor receptor
IMMUNE SYSTEM
10/25/18
Crystal structure of Sema domain of the Met receptor in complex with FAB
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Casaletto, J.B., Geddie, M.L., Abu-Yousif, A.O., Masson, K., Fulgham, A., Boudot, A., Maiwald, T., Kearns, J.D., Kohli, N., Su, S., Razlog, M., Raue, A., Kalra, A., Hakansson, M., Logan, D.T., Welin, M., Chattopadhyay, S., Harms, B.D., Nielsen, U.B., Schoeberl, B., Lugovskoy, A.A., MacBeath, G.
3.1
X-RAY DIFFRACTION
0.261
0.202
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6i04/abangle/6i04.abangle
sabdab_dataset/6i04/annotation/6i04_C_VH.ann
sabdab_dataset/6i04/annotation/6i04_D_VL.ann
sabdab_dataset/6i04/imgt/6i04_C_H.ann
sabdab_dataset/6i04/imgt/6i04_D_L.ann
sabdab_dataset/6i04/sequence/6i04_raw.pdb
sabdab_dataset/6i04/sequence/6i04_C_VH.fa
sabdab_dataset/6i04/sequence/6i04_D_VL.fa
sabdab_dataset/6i04/structure/6i04.pdb
sabdab_dataset/6i04/structure/chothia/6i04.pdb
true
false
train
6i04
H
L
0
A
protein
null
hepatocyte growth factor receptor
IMMUNE SYSTEM
10/25/18
Crystal structure of Sema domain of the Met receptor in complex with FAB
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Casaletto, J.B., Geddie, M.L., Abu-Yousif, A.O., Masson, K., Fulgham, A., Boudot, A., Maiwald, T., Kearns, J.D., Kohli, N., Su, S., Razlog, M., Raue, A., Kalra, A., Hakansson, M., Logan, D.T., Welin, M., Chattopadhyay, S., Harms, B.D., Nielsen, U.B., Schoeberl, B., Lugovskoy, A.A., MacBeath, G.
3.1
X-RAY DIFFRACTION
0.261
0.202
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6i04/abangle/6i04.abangle
sabdab_dataset/6i04/annotation/6i04_H_VH.ann
sabdab_dataset/6i04/annotation/6i04_L_VL.ann
sabdab_dataset/6i04/imgt/6i04_H_H.ann
sabdab_dataset/6i04/imgt/6i04_L_L.ann
sabdab_dataset/6i04/sequence/6i04_raw.pdb
sabdab_dataset/6i04/sequence/6i04_H_VH.fa
sabdab_dataset/6i04/sequence/6i04_L_VL.fa
sabdab_dataset/6i04/structure/6i04.pdb
sabdab_dataset/6i04/structure/chothia/6i04.pdb
true
false
train
6i07
A
a
0
C
protein
null
epithelial cell adhesion molecule
IMMUNE SYSTEM
10/25/18
Crystal structure of EpCAM in complex with scFv
HOMO SAPIENS
homo sapiens
null
homo sapiens
Casaletto, J.B., Geddie, M.L., Abu-Yousif, A.O., Masson, K., Fulgham, A., Boudot, A., Maiwald, T., Kearns, J.D., Kohli, N., Su, S., Razlog, M., Raue, A., Kalra, A., Hakansson, M., Logan, D.T., Welin, M., Chattopadhyay, S., Harms, B.D., Nielsen, U.B., Schoeberl, B., Lugovskoy, A.A., MacBeath, G.
2.35
X-RAY DIFFRACTION
0.279
0.230
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6i07/abangle/6i07.abangle
sabdab_dataset/6i07/annotation/6i07_A_VH.ann
sabdab_dataset/6i07/annotation/6i07_A_VL.ann
sabdab_dataset/6i07/imgt/6i07_A_H.ann
sabdab_dataset/6i07/imgt/6i07_A_L.ann
sabdab_dataset/6i07/sequence/6i07_raw.pdb
sabdab_dataset/6i07/sequence/6i07_A_VH.fa
sabdab_dataset/6i07/sequence/6i07_A_VL.fa
sabdab_dataset/6i07/structure/6i07.pdb
sabdab_dataset/6i07/structure/chothia/6i07.pdb
true
true
train
6i07
B
b
0
D
protein
null
epithelial cell adhesion molecule
IMMUNE SYSTEM
10/25/18
Crystal structure of EpCAM in complex with scFv
HOMO SAPIENS
homo sapiens
null
homo sapiens
Casaletto, J.B., Geddie, M.L., Abu-Yousif, A.O., Masson, K., Fulgham, A., Boudot, A., Maiwald, T., Kearns, J.D., Kohli, N., Su, S., Razlog, M., Raue, A., Kalra, A., Hakansson, M., Logan, D.T., Welin, M., Chattopadhyay, S., Harms, B.D., Nielsen, U.B., Schoeberl, B., Lugovskoy, A.A., MacBeath, G.
2.35
X-RAY DIFFRACTION
0.279
0.230
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6i07/abangle/6i07.abangle
sabdab_dataset/6i07/annotation/6i07_B_VH.ann
sabdab_dataset/6i07/annotation/6i07_B_VL.ann
sabdab_dataset/6i07/imgt/6i07_B_H.ann
sabdab_dataset/6i07/imgt/6i07_B_L.ann
sabdab_dataset/6i07/sequence/6i07_raw.pdb
sabdab_dataset/6i07/sequence/6i07_B_VH.fa
sabdab_dataset/6i07/sequence/6i07_B_VL.fa
sabdab_dataset/6i07/structure/6i07.pdb
sabdab_dataset/6i07/structure/chothia/6i07.pdb
true
false
train
6i1o
H
L
0
null
null
null
null
PROTEIN BINDING
10/29/18
Fab fragment of an antibody selective for wild-type alpha-1-antitrypsin
MUS MUSCULUS
mus musculus
mus musculus
null
Laffranchi, M., Elliston, E.L.K., Miranda, E., Perez, J., Fra, A., Lomas, D.A., Irving, J.A.
1.93
X-RAY DIFFRACTION
0.235
0.199
false
false
IGHV5
IGKV14
Kappa
null
null
null
null
null
sabdab_dataset/6i1o/abangle/6i1o.abangle
sabdab_dataset/6i1o/annotation/6i1o_H_VH.ann
sabdab_dataset/6i1o/annotation/6i1o_L_VL.ann
sabdab_dataset/6i1o/imgt/6i1o_H_H.ann
sabdab_dataset/6i1o/imgt/6i1o_L_L.ann
sabdab_dataset/6i1o/sequence/6i1o_raw.pdb
sabdab_dataset/6i1o/sequence/6i1o_H_VH.fa
sabdab_dataset/6i1o/sequence/6i1o_L_VL.fa
sabdab_dataset/6i1o/structure/6i1o.pdb
sabdab_dataset/6i1o/structure/chothia/6i1o.pdb
false
false
train
6i2g
A
null
0
B
peptide
null
n7p-ser-arg-leu-glu-glu-glu-leu-arg-arg-arg-leu-thr-glu-lpd
PEPTIDE BINDING PROTEIN
11/01/18
ALFA-tag binding nanobody (NbALFA) bound to ALFA-tag peptide.
VICUGNA PACOS; SYNTHETIC CONSTRUCT
vicugna pacos
null
synthetic construct
Martinez-Carranza, M., Stenmark, P.
1.5
X-RAY DIFFRACTION
0.200
0.165
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/6i2g/annotation/6i2g_A_VH.ann
null
null
null
sabdab_dataset/6i2g/sequence/6i2g_raw.pdb
sabdab_dataset/6i2g/sequence/6i2g_A_VH.fa
null
sabdab_dataset/6i2g/structure/6i2g.pdb
sabdab_dataset/6i2g/structure/chothia/6i2g.pdb
true
true
validation
6i3z
H
L
0
A | B
protein | peptide
NA | NA
alpha-1-antitrypsin | alpha-1-antitrypsin
PROTEIN BINDING
11/08/18
Fab fragment of an antibody selective for wild-type alpha-1-antitrypsin in complex with its antigen
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens | homo sapiens
Laffranchi, M., Elliston, E.L.K., Miranda, E., Perez, J., Jagger, A.M., Fra, A., Lomas, D.A., Irving, J.A.
3.1
X-RAY DIFFRACTION
0.307
0.261
false
false
IGHV5
IGKV14
Kappa
null
null
null
null
null
sabdab_dataset/6i3z/abangle/6i3z.abangle
sabdab_dataset/6i3z/annotation/6i3z_H_VH.ann
sabdab_dataset/6i3z/annotation/6i3z_L_VL.ann
sabdab_dataset/6i3z/imgt/6i3z_H_H.ann
sabdab_dataset/6i3z/imgt/6i3z_L_L.ann
sabdab_dataset/6i3z/sequence/6i3z_raw.pdb
sabdab_dataset/6i3z/sequence/6i3z_H_VH.fa
sabdab_dataset/6i3z/sequence/6i3z_L_VL.fa
sabdab_dataset/6i3z/structure/6i3z.pdb
sabdab_dataset/6i3z/structure/chothia/6i3z.pdb
true
false
train
6i53
G
null
0
A | E
protein | protein
NA | NA
gamma-aminobutyric acid receptor subunit alpha-1 | gamma-aminobutyric acid receptor subunit beta-3
TRANSPORT PROTEIN
11/12/18
Cryo-EM structure of the human synaptic alpha1-beta3-gamma2 GABAA receptor in complex with Megabody38 in a lipid nanodisc
HOMO SAPIENS; LAMA GLAMA
lama glama
null
homo sapiens | homo sapiens
Laverty, D., Desai, R., Uchanski, T., Masiulis, S., Wojciech, J.S., Malinauskas, T., Zivanov, J., Pardon, E., Steyaert, J., Miller, K.W., Aricescu, A.R.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6i53/annotation/6i53_G_VH.ann
null
sabdab_dataset/6i53/imgt/6i53_G_H.ann
null
sabdab_dataset/6i53/sequence/6i53_raw.pdb
sabdab_dataset/6i53/sequence/6i53_G_VH.fa
null
sabdab_dataset/6i53/structure/6i53.pdb
sabdab_dataset/6i53/structure/chothia/6i53.pdb
false
false
train
6i6j
C
null
0
A
protein
null
er lumen protein-retaining receptor 2
MEMBRANE PROTEIN
11/15/18
Crystal structure of the KDEL receptor bound to synthetic nanobody.
GALLUS GALLUS; UNIDENTIFIED
unidentified
null
gallus gallus
Braeuer, P., Newstead, S.
2.23
X-RAY DIFFRACTION
0.247
0.211
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6i6j/annotation/6i6j_C_VH.ann
null
sabdab_dataset/6i6j/imgt/6i6j_C_H.ann
null
sabdab_dataset/6i6j/sequence/6i6j_raw.pdb
sabdab_dataset/6i6j/sequence/6i6j_C_VH.fa
null
sabdab_dataset/6i6j/structure/6i6j.pdb
sabdab_dataset/6i6j/structure/chothia/6i6j.pdb
false
false
test
6i8g
B
null
0
A
protein
null
protein eds1l
IMMUNE SYSTEM
11/20/18
Structure of the plant immune signaling node EDS1 (enhanced disease susceptibility 1) in complex with nanobody ENB73
ARABIDOPSIS THALIANA; LAMA GLAMA
lama glama
null
arabidopsis thaliana
Niefind, K., Voss, M., Toelzer, C.
2.344
X-RAY DIFFRACTION
0.222
0.194
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6i8g/annotation/6i8g_B_VH.ann
null
sabdab_dataset/6i8g/imgt/6i8g_B_H.ann
null
sabdab_dataset/6i8g/sequence/6i8g_raw.pdb
sabdab_dataset/6i8g/sequence/6i8g_B_VH.fa
null
sabdab_dataset/6i8g/structure/6i8g.pdb
sabdab_dataset/6i8g/structure/chothia/6i8g.pdb
true
true
train
6i8h
B
null
0
A
protein
null
protein eds1l
IMMUNE SYSTEM
11/20/18
Structure of the plant immune signaling node EDS1 (enhanced disease susceptibility 1) in complex with nanobody ENB15
ARABIDOPSIS THALIANA; LAMA GLAMA
lama glama
null
arabidopsis thaliana
Niefind, K., Voss, M., Toelzer, C.
3.682
X-RAY DIFFRACTION
0.287
0.242
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6i8h/annotation/6i8h_B_VH.ann
null
sabdab_dataset/6i8h/imgt/6i8h_B_H.ann
null
sabdab_dataset/6i8h/sequence/6i8h_raw.pdb
sabdab_dataset/6i8h/sequence/6i8h_B_VH.fa
null
sabdab_dataset/6i8h/structure/6i8h.pdb
sabdab_dataset/6i8h/structure/chothia/6i8h.pdb
true
true
train
6i8s
E
I
0
A
protein
null
plasminogen activator inhibitor 1
BLOOD CLOTTING
11/21/18
Discovery and characterisation of an antibody that selectively modulates the inhibitory activity of plasminogen activator inhibitor-1
HOMO SAPIENS; ESCHERICHIA COLI
null
null
homo sapiens
Vousden, K.A., Lundqvist, T., Popovic, B.
2.9
X-RAY DIFFRACTION
0.243
0.219
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6i8s/abangle/6i8s.abangle
sabdab_dataset/6i8s/annotation/6i8s_E_VH.ann
sabdab_dataset/6i8s/annotation/6i8s_I_VL.ann
sabdab_dataset/6i8s/imgt/6i8s_E_H.ann
sabdab_dataset/6i8s/imgt/6i8s_I_L.ann
sabdab_dataset/6i8s/sequence/6i8s_raw.pdb
sabdab_dataset/6i8s/sequence/6i8s_E_VH.fa
sabdab_dataset/6i8s/sequence/6i8s_I_VL.fa
sabdab_dataset/6i8s/structure/6i8s.pdb
sabdab_dataset/6i8s/structure/chothia/6i8s.pdb
true
false
train
6i8s
F
J
0
B
protein
null
plasminogen activator inhibitor 1
BLOOD CLOTTING
11/21/18
Discovery and characterisation of an antibody that selectively modulates the inhibitory activity of plasminogen activator inhibitor-1
HOMO SAPIENS; ESCHERICHIA COLI
null
null
homo sapiens
Vousden, K.A., Lundqvist, T., Popovic, B.
2.9
X-RAY DIFFRACTION
0.243
0.219
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6i8s/abangle/6i8s.abangle
sabdab_dataset/6i8s/annotation/6i8s_F_VH.ann
sabdab_dataset/6i8s/annotation/6i8s_J_VL.ann
sabdab_dataset/6i8s/imgt/6i8s_F_H.ann
sabdab_dataset/6i8s/imgt/6i8s_J_L.ann
sabdab_dataset/6i8s/sequence/6i8s_raw.pdb
sabdab_dataset/6i8s/sequence/6i8s_F_VH.fa
sabdab_dataset/6i8s/sequence/6i8s_J_VL.fa
sabdab_dataset/6i8s/structure/6i8s.pdb
sabdab_dataset/6i8s/structure/chothia/6i8s.pdb
true
false
train
6i8s
G
K
0
C
protein
null
plasminogen activator inhibitor 1
BLOOD CLOTTING
11/21/18
Discovery and characterisation of an antibody that selectively modulates the inhibitory activity of plasminogen activator inhibitor-1
HOMO SAPIENS; ESCHERICHIA COLI
null
null
homo sapiens
Vousden, K.A., Lundqvist, T., Popovic, B.
2.9
X-RAY DIFFRACTION
0.243
0.219
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6i8s/abangle/6i8s.abangle
sabdab_dataset/6i8s/annotation/6i8s_G_VH.ann
sabdab_dataset/6i8s/annotation/6i8s_K_VL.ann
sabdab_dataset/6i8s/imgt/6i8s_G_H.ann
sabdab_dataset/6i8s/imgt/6i8s_K_L.ann
sabdab_dataset/6i8s/sequence/6i8s_raw.pdb
sabdab_dataset/6i8s/sequence/6i8s_G_VH.fa
sabdab_dataset/6i8s/sequence/6i8s_K_VL.fa
sabdab_dataset/6i8s/structure/6i8s.pdb
sabdab_dataset/6i8s/structure/chothia/6i8s.pdb
true
false
test
6i8s
H
L
0
D
protein
null
plasminogen activator inhibitor 1
BLOOD CLOTTING
11/21/18
Discovery and characterisation of an antibody that selectively modulates the inhibitory activity of plasminogen activator inhibitor-1
HOMO SAPIENS; ESCHERICHIA COLI
null
null
homo sapiens
Vousden, K.A., Lundqvist, T., Popovic, B.
2.9
X-RAY DIFFRACTION
0.243
0.219
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6i8s/abangle/6i8s.abangle
sabdab_dataset/6i8s/annotation/6i8s_H_VH.ann
sabdab_dataset/6i8s/annotation/6i8s_L_VL.ann
sabdab_dataset/6i8s/imgt/6i8s_H_H.ann
sabdab_dataset/6i8s/imgt/6i8s_L_L.ann
sabdab_dataset/6i8s/sequence/6i8s_raw.pdb
sabdab_dataset/6i8s/sequence/6i8s_H_VH.fa
sabdab_dataset/6i8s/sequence/6i8s_L_VL.fa
sabdab_dataset/6i8s/structure/6i8s.pdb
sabdab_dataset/6i8s/structure/chothia/6i8s.pdb
true
false
validation
6i9i
A
B
0
C
protein
null
glycoprotein
VIRAL PROTEIN
11/23/18
Rift valley fever virus Gn in complex with a neutralizing antibody fragment
ORYCTOLAGUS CUNICULUS; RIFT VALLEY FEVER VIRUS
oryctolagus cuniculus
oryctolagus cuniculus
rift valley fever virus
Allen, E.R., Bowden, T.A.
1.98
X-RAY DIFFRACTION
0.243
0.203
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6i9i/abangle/6i9i.abangle
sabdab_dataset/6i9i/annotation/6i9i_A_VH.ann
sabdab_dataset/6i9i/annotation/6i9i_B_VL.ann
sabdab_dataset/6i9i/imgt/6i9i_A_H.ann
sabdab_dataset/6i9i/imgt/6i9i_B_L.ann
sabdab_dataset/6i9i/sequence/6i9i_raw.pdb
sabdab_dataset/6i9i/sequence/6i9i_A_VH.fa
sabdab_dataset/6i9i/sequence/6i9i_B_VL.fa
sabdab_dataset/6i9i/structure/6i9i.pdb
sabdab_dataset/6i9i/structure/chothia/6i9i.pdb
true
false
train
6i9i
H
L
0
D
protein
null
glycoprotein
VIRAL PROTEIN
11/23/18
Rift valley fever virus Gn in complex with a neutralizing antibody fragment
ORYCTOLAGUS CUNICULUS; RIFT VALLEY FEVER VIRUS
oryctolagus cuniculus
oryctolagus cuniculus
rift valley fever virus
Allen, E.R., Bowden, T.A.
1.98
X-RAY DIFFRACTION
0.243
0.203
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6i9i/abangle/6i9i.abangle
sabdab_dataset/6i9i/annotation/6i9i_H_VH.ann
sabdab_dataset/6i9i/annotation/6i9i_L_VL.ann
sabdab_dataset/6i9i/imgt/6i9i_H_H.ann
sabdab_dataset/6i9i/imgt/6i9i_L_L.ann
sabdab_dataset/6i9i/sequence/6i9i_raw.pdb
sabdab_dataset/6i9i/sequence/6i9i_H_VH.fa
sabdab_dataset/6i9i/sequence/6i9i_L_VL.fa
sabdab_dataset/6i9i/structure/6i9i.pdb
sabdab_dataset/6i9i/structure/chothia/6i9i.pdb
true
false
train
6iap
E
D
0
A
protein
null
natural cytotoxicity triggering receptor 1
IMMUNE SYSTEM
11/27/18
structure of human NKp46 in complex with antibody NKp46-1 and NKp46-4
HOMO SAPIENS; SYNTHETIC CONSTRUCT
synthetic construct
synthetic construct
homo sapiens
Roussel, A., Amigues, B.
2.9
X-RAY DIFFRACTION
0.263
0.187
false
true
IGHV1
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/6iap/abangle/6iap.abangle
sabdab_dataset/6iap/annotation/6iap_E_VH.ann
sabdab_dataset/6iap/annotation/6iap_D_VL.ann
sabdab_dataset/6iap/imgt/6iap_E_H.ann
sabdab_dataset/6iap/imgt/6iap_D_L.ann
sabdab_dataset/6iap/sequence/6iap_raw.pdb
sabdab_dataset/6iap/sequence/6iap_E_VH.fa
sabdab_dataset/6iap/sequence/6iap_D_VL.fa
sabdab_dataset/6iap/structure/6iap.pdb
sabdab_dataset/6iap/structure/chothia/6iap.pdb
true
false
test
6iap
H
L
0
A
protein
null
natural cytotoxicity triggering receptor 1
IMMUNE SYSTEM
11/27/18
structure of human NKp46 in complex with antibody NKp46-1 and NKp46-4
HOMO SAPIENS; SYNTHETIC CONSTRUCT
synthetic construct
synthetic construct
homo sapiens
Roussel, A., Amigues, B.
2.9
X-RAY DIFFRACTION
0.263
0.187
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6iap/abangle/6iap.abangle
sabdab_dataset/6iap/annotation/6iap_H_VH.ann
sabdab_dataset/6iap/annotation/6iap_L_VL.ann
sabdab_dataset/6iap/imgt/6iap_H_H.ann
sabdab_dataset/6iap/imgt/6iap_L_L.ann
sabdab_dataset/6iap/sequence/6iap_raw.pdb
sabdab_dataset/6iap/sequence/6iap_H_VH.fa
sabdab_dataset/6iap/sequence/6iap_L_VL.fa
sabdab_dataset/6iap/structure/6iap.pdb
sabdab_dataset/6iap/structure/chothia/6iap.pdb
true
false
train
6ias
H
L
0
null
null
null
null
IMMUNE SYSTEM
11/27/18
structure of human NKp46 in complex with antibody NKp46-1 and NKp46-4
SYNTHETIC CONSTRUCT
synthetic construct
synthetic construct
null
Roussel, A., Amigues, B.
1.75
X-RAY DIFFRACTION
0.228
0.195
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6ias/abangle/6ias.abangle
sabdab_dataset/6ias/annotation/6ias_H_VH.ann
sabdab_dataset/6ias/annotation/6ias_L_VL.ann
sabdab_dataset/6ias/imgt/6ias_H_H.ann
sabdab_dataset/6ias/imgt/6ias_L_L.ann
sabdab_dataset/6ias/sequence/6ias_raw.pdb
sabdab_dataset/6ias/sequence/6ias_H_VH.fa
sabdab_dataset/6ias/sequence/6ias_L_VL.fa
sabdab_dataset/6ias/structure/6ias.pdb
sabdab_dataset/6ias/structure/chothia/6ias.pdb
true
false
validation
6ibb
B
null
0
A
protein
null
succinate receptor 1
MEMBRANE PROTEIN
11/29/18
Crystal structure of the rat isoform of the succinate receptor SUCNR1 (GPR91) in complex with a nanobody
RATTUS NORVEGICUS; VICUGNA PACOS
vicugna pacos
null
rattus norvegicus
Haffke, M., Jaakola, V.-P.
2.12
X-RAY DIFFRACTION
0.216
0.178
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6ibb/annotation/6ibb_B_VH.ann
null
sabdab_dataset/6ibb/imgt/6ibb_B_H.ann
null
sabdab_dataset/6ibb/sequence/6ibb_raw.pdb
sabdab_dataset/6ibb/sequence/6ibb_B_VH.fa
null
sabdab_dataset/6ibb/structure/6ibb.pdb
sabdab_dataset/6ibb/structure/chothia/6ibb.pdb
false
false
validation
6ibb
D
null
0
C
protein
null
succinate receptor 1
MEMBRANE PROTEIN
11/29/18
Crystal structure of the rat isoform of the succinate receptor SUCNR1 (GPR91) in complex with a nanobody
RATTUS NORVEGICUS; VICUGNA PACOS
vicugna pacos
null
rattus norvegicus
Haffke, M., Jaakola, V.-P.
2.12
X-RAY DIFFRACTION
0.216
0.178
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6ibb/annotation/6ibb_D_VH.ann
null
sabdab_dataset/6ibb/imgt/6ibb_D_H.ann
null
sabdab_dataset/6ibb/sequence/6ibb_raw.pdb
sabdab_dataset/6ibb/sequence/6ibb_D_VH.fa
null
sabdab_dataset/6ibb/structure/6ibb.pdb
sabdab_dataset/6ibb/structure/chothia/6ibb.pdb
false
false
train
6ibl
C
null
0
A
protein
null
thioredoxin 1,beta-1 adrenergic receptor
IMMUNE SYSTEM
11/30/18
ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND AGONIST FORMOTEROL AND NANOBODY Nb80
ESCHERICHIA COLI (STRAIN K12); MELEAGRIS GALLOPAVO; LAMA GLAMA
lama glama
null
escherichia coli (strain k12), meleagrisgallopavo
Warne, T., Edwards, P.C., Dore, A.S., Leslie, A.G.W., Tate, C.G.
2.7
X-RAY DIFFRACTION
0.277
0.240
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6ibl/annotation/6ibl_C_VH.ann
null
sabdab_dataset/6ibl/imgt/6ibl_C_H.ann
null
sabdab_dataset/6ibl/sequence/6ibl_raw.pdb
sabdab_dataset/6ibl/sequence/6ibl_C_VH.fa
null
sabdab_dataset/6ibl/structure/6ibl.pdb
sabdab_dataset/6ibl/structure/chothia/6ibl.pdb
false
false
train
6ibl
D
null
0
B
protein
null
thioredoxin 1,beta-1 adrenergic receptor
IMMUNE SYSTEM
11/30/18
ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND AGONIST FORMOTEROL AND NANOBODY Nb80
ESCHERICHIA COLI (STRAIN K12); MELEAGRIS GALLOPAVO; LAMA GLAMA
lama glama
null
escherichia coli (strain k12), meleagrisgallopavo
Warne, T., Edwards, P.C., Dore, A.S., Leslie, A.G.W., Tate, C.G.
2.7
X-RAY DIFFRACTION
0.277
0.240
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6ibl/annotation/6ibl_D_VH.ann
null
sabdab_dataset/6ibl/imgt/6ibl_D_H.ann
null
sabdab_dataset/6ibl/sequence/6ibl_raw.pdb
sabdab_dataset/6ibl/sequence/6ibl_D_VH.fa
null
sabdab_dataset/6ibl/structure/6ibl.pdb
sabdab_dataset/6ibl/structure/chothia/6ibl.pdb
false
false
train
6icc
H
L
0
A
protein
null
pdz tandem fragment with pa tag
SIGNALING PROTEIN
09/05/18
The NZ-1 Fab complexed with the PDZ tandem fragment of A. aeolicus S2P homolog with the PA12 tag inserted between the residues 181 and 186
AQUIFEX AEOLICUS VF5; RATTUS NORVEGICUS
rattus norvegicus
rattus norvegicus
aquifex aeolicus vf5
Tamura, R., Oi, R., Kaneko, M.K., Kato, Y., Nogi, T.
2.0
X-RAY DIFFRACTION
0.260
0.213
false
true
IGHV5
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/6icc/abangle/6icc.abangle
sabdab_dataset/6icc/annotation/6icc_H_VH.ann
sabdab_dataset/6icc/annotation/6icc_L_VL.ann
sabdab_dataset/6icc/imgt/6icc_H_H.ann
sabdab_dataset/6icc/imgt/6icc_L_L.ann
sabdab_dataset/6icc/sequence/6icc_raw.pdb
sabdab_dataset/6icc/sequence/6icc_H_VH.fa
sabdab_dataset/6icc/sequence/6icc_L_VL.fa
sabdab_dataset/6icc/structure/6icc.pdb
sabdab_dataset/6icc/structure/chothia/6icc.pdb
false
false
validation
6icf
H
L
0
A
protein
null
putative zinc metalloprotease aq_1964,putative zincmetalloprotease aq_1964
SIGNALING PROTEIN
09/05/18
The NZ-1 Fab complexed with the PDZ tandem fragment of A. aeolicus S2P homolog with the PA12 tag inserted between the residues 263 and 266
AQUIFEX AEOLICUS; RATTUS NORVEGICUS
rattus norvegicus
rattus norvegicus
aquifex aeolicus
Tamura, R., Oi, R., Kaneko, M.K., Kato, Y., Nogi, T.
4.0
X-RAY DIFFRACTION
0.274
0.213
false
true
IGHV5
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/6icf/abangle/6icf.abangle
sabdab_dataset/6icf/annotation/6icf_H_VH.ann
sabdab_dataset/6icf/annotation/6icf_L_VL.ann
sabdab_dataset/6icf/imgt/6icf_H_H.ann
sabdab_dataset/6icf/imgt/6icf_L_L.ann
sabdab_dataset/6icf/sequence/6icf_raw.pdb
sabdab_dataset/6icf/sequence/6icf_H_VH.fa
sabdab_dataset/6icf/sequence/6icf_L_VL.fa
sabdab_dataset/6icf/structure/6icf.pdb
sabdab_dataset/6icf/structure/chothia/6icf.pdb
false
false
train
6id4
C
D
0
E | F
protein | protein
NA | NA
mhc class i antigen | beta-2-microglobulin
IMMUNE SYSTEM
09/08/18
Defining the structural basis for human alloantibody binding to human leukocyte antigen allele HLA-A*11:01
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Lescar, J., Wong, Y.H., Liew, C.W., Gu, Y., MacAry, P.A.
2.4
X-RAY DIFFRACTION
0.246
0.197
false
true
IGHV1
IGLV5
Lambda
null
null
null
null
null
sabdab_dataset/6id4/abangle/6id4.abangle
sabdab_dataset/6id4/annotation/6id4_C_VH.ann
sabdab_dataset/6id4/annotation/6id4_D_VL.ann
sabdab_dataset/6id4/imgt/6id4_C_H.ann
sabdab_dataset/6id4/imgt/6id4_D_L.ann
sabdab_dataset/6id4/sequence/6id4_raw.pdb
sabdab_dataset/6id4/sequence/6id4_C_VH.fa
sabdab_dataset/6id4/sequence/6id4_D_VL.fa
sabdab_dataset/6id4/structure/6id4.pdb
sabdab_dataset/6id4/structure/chothia/6id4.pdb
true
false
train
6id4
H
L
0
A | B
protein | protein
NA | NA
mhc class i antigen | beta-2-microglobulin
IMMUNE SYSTEM
09/08/18
Defining the structural basis for human alloantibody binding to human leukocyte antigen allele HLA-A*11:01
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Lescar, J., Wong, Y.H., Liew, C.W., Gu, Y., MacAry, P.A.
2.4
X-RAY DIFFRACTION
0.246
0.197
false
true
IGHV1
IGLV5
Lambda
null
null
null
null
null
sabdab_dataset/6id4/abangle/6id4.abangle
sabdab_dataset/6id4/annotation/6id4_H_VH.ann
sabdab_dataset/6id4/annotation/6id4_L_VL.ann
sabdab_dataset/6id4/imgt/6id4_H_H.ann
sabdab_dataset/6id4/imgt/6id4_L_L.ann
sabdab_dataset/6id4/sequence/6id4_raw.pdb
sabdab_dataset/6id4/sequence/6id4_H_VH.fa
sabdab_dataset/6id4/sequence/6id4_L_VL.fa
sabdab_dataset/6id4/structure/6id4.pdb
sabdab_dataset/6id4/structure/chothia/6id4.pdb
true
false
train
6idg
H
L
0
A
nucleic-acid
64T
5-HYDROXY-THYMIDINE-5'-MONOPHOSPHATE
IMMUNE SYSTEM
09/10/18
antibody 64M-5 Fab in complex with dT(6-4)T
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
synthetic construct
Yokoyama, H., Mizutani, R., Noguchi, S., Hayashida, N.
2.0
X-RAY DIFFRACTION
0.240
0.192
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6idg/abangle/6idg.abangle
sabdab_dataset/6idg/annotation/6idg_H_VH.ann
sabdab_dataset/6idg/annotation/6idg_L_VL.ann
sabdab_dataset/6idg/imgt/6idg_H_H.ann
sabdab_dataset/6idg/imgt/6idg_L_L.ann
sabdab_dataset/6idg/sequence/6idg_raw.pdb
sabdab_dataset/6idg/sequence/6idg_H_VH.fa
sabdab_dataset/6idg/sequence/6idg_L_VL.fa
sabdab_dataset/6idg/structure/6idg.pdb
sabdab_dataset/6idg/structure/chothia/6idg.pdb
true
false
validation
6idh
H
L
0
null
null
null
null
IMMUNE SYSTEM
09/10/18
Antibody 64M-5 Fab in ligand-free form
MUS MUSCULUS
mus musculus
mus musculus
null
Yokoyama, H., Mizutani, R., Noguchi, S., Hayashida, N.
2.5
X-RAY DIFFRACTION
0.281
0.229
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6idh/abangle/6idh.abangle
sabdab_dataset/6idh/annotation/6idh_H_VH.ann
sabdab_dataset/6idh/annotation/6idh_L_VL.ann
sabdab_dataset/6idh/imgt/6idh_H_H.ann
sabdab_dataset/6idh/imgt/6idh_L_L.ann
sabdab_dataset/6idh/sequence/6idh_raw.pdb
sabdab_dataset/6idh/sequence/6idh_H_VH.fa
sabdab_dataset/6idh/sequence/6idh_L_VL.fa
sabdab_dataset/6idh/structure/6idh.pdb
sabdab_dataset/6idh/structure/chothia/6idh.pdb
false
false
train
6idi
H
L
0
D
protein
null
premembrane protein
VIRUS
09/10/18
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 8.0.
DENGUE VIRUS 3; HOMO SAPIENS
homo sapiens
homo sapiens
dengue virus 3
Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M.
12
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/6idi/abangle/6idi.abangle
sabdab_dataset/6idi/annotation/6idi_H_VH.ann
sabdab_dataset/6idi/annotation/6idi_L_VL.ann
sabdab_dataset/6idi/imgt/6idi_H_H.ann
sabdab_dataset/6idi/imgt/6idi_L_L.ann
sabdab_dataset/6idi/sequence/6idi_raw.pdb
sabdab_dataset/6idi/sequence/6idi_H_VH.fa
sabdab_dataset/6idi/sequence/6idi_L_VL.fa
sabdab_dataset/6idi/structure/6idi.pdb
sabdab_dataset/6idi/structure/chothia/6idi.pdb
false
false
test
6idi
I
J
0
E
protein
null
premembrane protein
VIRUS
09/10/18
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 8.0.
DENGUE VIRUS 3; HOMO SAPIENS
homo sapiens
homo sapiens
dengue virus 3
Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M.
12
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/6idi/abangle/6idi.abangle
sabdab_dataset/6idi/annotation/6idi_I_VH.ann
sabdab_dataset/6idi/annotation/6idi_J_VL.ann
sabdab_dataset/6idi/imgt/6idi_I_H.ann
sabdab_dataset/6idi/imgt/6idi_J_L.ann
sabdab_dataset/6idi/sequence/6idi_raw.pdb
sabdab_dataset/6idi/sequence/6idi_I_VH.fa
sabdab_dataset/6idi/sequence/6idi_J_VL.fa
sabdab_dataset/6idi/structure/6idi.pdb
sabdab_dataset/6idi/structure/chothia/6idi.pdb
false
false
train
6idi
M
N
0
F
protein
null
premembrane protein
VIRUS
09/10/18
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 8.0.
DENGUE VIRUS 3; HOMO SAPIENS
homo sapiens
homo sapiens
dengue virus 3
Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M.
12
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/6idi/abangle/6idi.abangle
sabdab_dataset/6idi/annotation/6idi_M_VH.ann
sabdab_dataset/6idi/annotation/6idi_N_VL.ann
sabdab_dataset/6idi/imgt/6idi_M_H.ann
sabdab_dataset/6idi/imgt/6idi_N_L.ann
sabdab_dataset/6idi/sequence/6idi_raw.pdb
sabdab_dataset/6idi/sequence/6idi_M_VH.fa
sabdab_dataset/6idi/sequence/6idi_N_VL.fa
sabdab_dataset/6idi/structure/6idi.pdb
sabdab_dataset/6idi/structure/chothia/6idi.pdb
false
false
train
6idk
H
L
0
D
protein
null
premembrane protein
VIRUS
09/10/18
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class I particle)
DENGUE VIRUS 3; HOMO SAPIENS
homo sapiens
homo sapiens
dengue virus 3
Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M.
25
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/6idk/abangle/6idk.abangle
sabdab_dataset/6idk/annotation/6idk_H_VH.ann
sabdab_dataset/6idk/annotation/6idk_L_VL.ann
sabdab_dataset/6idk/imgt/6idk_H_H.ann
sabdab_dataset/6idk/imgt/6idk_L_L.ann
sabdab_dataset/6idk/sequence/6idk_raw.pdb
sabdab_dataset/6idk/sequence/6idk_H_VH.fa
sabdab_dataset/6idk/sequence/6idk_L_VL.fa
sabdab_dataset/6idk/structure/6idk.pdb
sabdab_dataset/6idk/structure/chothia/6idk.pdb
false
false
train
6idk
I
J
0
E
protein
null
premembrane protein
VIRUS
09/10/18
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class I particle)
DENGUE VIRUS 3; HOMO SAPIENS
homo sapiens
homo sapiens
dengue virus 3
Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M.
25
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/6idk/abangle/6idk.abangle
sabdab_dataset/6idk/annotation/6idk_I_VH.ann
sabdab_dataset/6idk/annotation/6idk_J_VL.ann
sabdab_dataset/6idk/imgt/6idk_I_H.ann
sabdab_dataset/6idk/imgt/6idk_J_L.ann
sabdab_dataset/6idk/sequence/6idk_raw.pdb
sabdab_dataset/6idk/sequence/6idk_I_VH.fa
sabdab_dataset/6idk/sequence/6idk_J_VL.fa
sabdab_dataset/6idk/structure/6idk.pdb
sabdab_dataset/6idk/structure/chothia/6idk.pdb
false
false
train
6idk
M
N
0
F
protein
null
premembrane protein
VIRUS
09/10/18
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class I particle)
DENGUE VIRUS 3; HOMO SAPIENS
homo sapiens
homo sapiens
dengue virus 3
Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M.
25
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/6idk/abangle/6idk.abangle
sabdab_dataset/6idk/annotation/6idk_M_VH.ann
sabdab_dataset/6idk/annotation/6idk_N_VL.ann
sabdab_dataset/6idk/imgt/6idk_M_H.ann
sabdab_dataset/6idk/imgt/6idk_N_L.ann
sabdab_dataset/6idk/sequence/6idk_raw.pdb
sabdab_dataset/6idk/sequence/6idk_M_VH.fa
sabdab_dataset/6idk/sequence/6idk_N_VL.fa
sabdab_dataset/6idk/structure/6idk.pdb
sabdab_dataset/6idk/structure/chothia/6idk.pdb
false
false
train
6idl
I
J
0
E
protein
null
premembrane protein
VIRUS
09/10/18
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class II particle)
DENGUE VIRUS 3; HOMO SAPIENS
homo sapiens
homo sapiens
dengue virus 3
Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M.
25
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/6idl/abangle/6idl.abangle
sabdab_dataset/6idl/annotation/6idl_I_VH.ann
sabdab_dataset/6idl/annotation/6idl_J_VL.ann
sabdab_dataset/6idl/imgt/6idl_I_H.ann
sabdab_dataset/6idl/imgt/6idl_J_L.ann
sabdab_dataset/6idl/sequence/6idl_raw.pdb
sabdab_dataset/6idl/sequence/6idl_I_VH.fa
sabdab_dataset/6idl/sequence/6idl_J_VL.fa
sabdab_dataset/6idl/structure/6idl.pdb
sabdab_dataset/6idl/structure/chothia/6idl.pdb
false
false
train
6idl
M
N
0
F
protein
null
premembrane protein
VIRUS
09/10/18
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class II particle)
DENGUE VIRUS 3; HOMO SAPIENS
homo sapiens
homo sapiens
dengue virus 3
Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M.
25
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/6idl/abangle/6idl.abangle
sabdab_dataset/6idl/annotation/6idl_M_VH.ann
sabdab_dataset/6idl/annotation/6idl_N_VL.ann
sabdab_dataset/6idl/imgt/6idl_M_H.ann
sabdab_dataset/6idl/imgt/6idl_N_L.ann
sabdab_dataset/6idl/sequence/6idl_raw.pdb
sabdab_dataset/6idl/sequence/6idl_M_VH.fa
sabdab_dataset/6idl/sequence/6idl_N_VL.fa
sabdab_dataset/6idl/structure/6idl.pdb
sabdab_dataset/6idl/structure/chothia/6idl.pdb
false
false
train
6iea
H
L
0
A
protein
null
nsmgngc
STRUCTURAL PROTEIN/IMMUNE SYSTEM
04/10/19
Structure of RVFV Gn and human monoclonal antibody R13
RIFT VALLEY FEVER VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
rift valley fever virus
Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.
2.0
X-RAY DIFFRACTION
0.225
0.181
false
true
IGHV4
IGLV5
Lambda
null
null
null
null
null
sabdab_dataset/6iea/abangle/6iea.abangle
sabdab_dataset/6iea/annotation/6iea_H_VH.ann
sabdab_dataset/6iea/annotation/6iea_L_VL.ann
sabdab_dataset/6iea/imgt/6iea_H_H.ann
sabdab_dataset/6iea/imgt/6iea_L_L.ann
sabdab_dataset/6iea/sequence/6iea_raw.pdb
sabdab_dataset/6iea/sequence/6iea_H_VH.fa
sabdab_dataset/6iea/sequence/6iea_L_VL.fa
sabdab_dataset/6iea/structure/6iea.pdb
sabdab_dataset/6iea/structure/chothia/6iea.pdb
true
false
train
6ieb
E
F
0
B
protein
null
nsmgngc
STRUCTURAL PROTEIN/IMMUNE SYSTEM
04/10/19
Structure of RVFV Gn and human monoclonal antibody R15
HOMO SAPIENS; RIFT VALLEY FEVER VIRUS
homo sapiens
homo sapiens
rift valley fever virus
Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.
2.409
X-RAY DIFFRACTION
0.246
0.195
false
true
IGHV4
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/6ieb/abangle/6ieb.abangle
sabdab_dataset/6ieb/annotation/6ieb_E_VH.ann
sabdab_dataset/6ieb/annotation/6ieb_F_VL.ann
sabdab_dataset/6ieb/imgt/6ieb_E_H.ann
sabdab_dataset/6ieb/imgt/6ieb_F_L.ann
sabdab_dataset/6ieb/sequence/6ieb_raw.pdb
sabdab_dataset/6ieb/sequence/6ieb_E_VH.fa
sabdab_dataset/6ieb/sequence/6ieb_F_VL.fa
sabdab_dataset/6ieb/structure/6ieb.pdb
sabdab_dataset/6ieb/structure/chothia/6ieb.pdb
false
false
train
6ieb
H
L
0
A
protein
null
nsmgngc
STRUCTURAL PROTEIN/IMMUNE SYSTEM
04/10/19
Structure of RVFV Gn and human monoclonal antibody R15
HOMO SAPIENS; RIFT VALLEY FEVER VIRUS
homo sapiens
homo sapiens
rift valley fever virus
Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.
2.409
X-RAY DIFFRACTION
0.246
0.195
false
true
IGHV4
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/6ieb/abangle/6ieb.abangle
sabdab_dataset/6ieb/annotation/6ieb_H_VH.ann
sabdab_dataset/6ieb/annotation/6ieb_L_VL.ann
sabdab_dataset/6ieb/imgt/6ieb_H_H.ann
sabdab_dataset/6ieb/imgt/6ieb_L_L.ann
sabdab_dataset/6ieb/sequence/6ieb_raw.pdb
sabdab_dataset/6ieb/sequence/6ieb_H_VH.fa
sabdab_dataset/6ieb/sequence/6ieb_L_VL.fa
sabdab_dataset/6ieb/structure/6ieb.pdb
sabdab_dataset/6ieb/structure/chothia/6ieb.pdb
false
false
test
6iec
C
D
0
B
protein
null
nsmgngc
STRUCTURAL PROTEIN/IMMUNE SYSTEM
04/10/19
Structure of RVFV Gn and human monoclonal antibody R17
RIFT VALLEY FEVER VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
rift valley fever virus
Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.
3.2
X-RAY DIFFRACTION
0.281
0.241
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/6iec/abangle/6iec.abangle
sabdab_dataset/6iec/annotation/6iec_C_VH.ann
sabdab_dataset/6iec/annotation/6iec_D_VL.ann
sabdab_dataset/6iec/imgt/6iec_C_H.ann
sabdab_dataset/6iec/imgt/6iec_D_L.ann
sabdab_dataset/6iec/sequence/6iec_raw.pdb
sabdab_dataset/6iec/sequence/6iec_C_VH.fa
sabdab_dataset/6iec/sequence/6iec_D_VL.fa
sabdab_dataset/6iec/structure/6iec.pdb
sabdab_dataset/6iec/structure/chothia/6iec.pdb
true
true
train
6iec
F
G
0
E
protein
null
nsmgngc
STRUCTURAL PROTEIN/IMMUNE SYSTEM
04/10/19
Structure of RVFV Gn and human monoclonal antibody R17
RIFT VALLEY FEVER VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
rift valley fever virus
Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.
3.2
X-RAY DIFFRACTION
0.281
0.241
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/6iec/abangle/6iec.abangle
sabdab_dataset/6iec/annotation/6iec_F_VH.ann
sabdab_dataset/6iec/annotation/6iec_G_VL.ann
sabdab_dataset/6iec/imgt/6iec_F_H.ann
sabdab_dataset/6iec/imgt/6iec_G_L.ann
sabdab_dataset/6iec/sequence/6iec_raw.pdb
sabdab_dataset/6iec/sequence/6iec_F_VH.fa
sabdab_dataset/6iec/sequence/6iec_G_VL.fa
sabdab_dataset/6iec/structure/6iec.pdb
sabdab_dataset/6iec/structure/chothia/6iec.pdb
true
false
train
6iec
H
L
0
A
protein
null
nsmgngc
STRUCTURAL PROTEIN/IMMUNE SYSTEM
04/10/19
Structure of RVFV Gn and human monoclonal antibody R17
RIFT VALLEY FEVER VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
rift valley fever virus
Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.
3.2
X-RAY DIFFRACTION
0.281
0.241
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/6iec/abangle/6iec.abangle
sabdab_dataset/6iec/annotation/6iec_H_VH.ann
sabdab_dataset/6iec/annotation/6iec_L_VL.ann
sabdab_dataset/6iec/imgt/6iec_H_H.ann
sabdab_dataset/6iec/imgt/6iec_L_L.ann
sabdab_dataset/6iec/sequence/6iec_raw.pdb
sabdab_dataset/6iec/sequence/6iec_H_VH.fa
sabdab_dataset/6iec/sequence/6iec_L_VL.fa
sabdab_dataset/6iec/structure/6iec.pdb
sabdab_dataset/6iec/structure/chothia/6iec.pdb
true
false
train
6iec
J
K
0
I
protein
null
nsmgngc
STRUCTURAL PROTEIN/IMMUNE SYSTEM
04/10/19
Structure of RVFV Gn and human monoclonal antibody R17
RIFT VALLEY FEVER VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
rift valley fever virus
Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.
3.2
X-RAY DIFFRACTION
0.281
0.241
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
sabdab_dataset/6iec/abangle/6iec.abangle
sabdab_dataset/6iec/annotation/6iec_J_VH.ann
sabdab_dataset/6iec/annotation/6iec_K_VL.ann
sabdab_dataset/6iec/imgt/6iec_J_H.ann
sabdab_dataset/6iec/imgt/6iec_K_L.ann
sabdab_dataset/6iec/sequence/6iec_raw.pdb
sabdab_dataset/6iec/sequence/6iec_J_VH.fa
sabdab_dataset/6iec/sequence/6iec_K_VL.fa
sabdab_dataset/6iec/structure/6iec.pdb
sabdab_dataset/6iec/structure/chothia/6iec.pdb
true
false
train
6iek
B
C
0
A
protein
null
nsmgngc
STRUCTURAL PROTEIN/IMMUNE SYSTEM
04/10/19
Structure of RVFV Gn and human monoclonal antibody R12
RIFT VALLEY FEVER VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
rift valley fever virus
Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.
2.7
X-RAY DIFFRACTION
0.258
0.225
false
true
IGHV1
IGLV5
Lambda
null
null
null
null
null
sabdab_dataset/6iek/abangle/6iek.abangle
sabdab_dataset/6iek/annotation/6iek_B_VH.ann
sabdab_dataset/6iek/annotation/6iek_C_VL.ann
sabdab_dataset/6iek/imgt/6iek_B_H.ann
sabdab_dataset/6iek/imgt/6iek_C_L.ann
sabdab_dataset/6iek/sequence/6iek_raw.pdb
sabdab_dataset/6iek/sequence/6iek_B_VH.fa
sabdab_dataset/6iek/sequence/6iek_C_VL.fa
sabdab_dataset/6iek/structure/6iek.pdb
sabdab_dataset/6iek/structure/chothia/6iek.pdb
true
false
train
6iek
E
F
0
D
protein
null
nsmgngc
STRUCTURAL PROTEIN/IMMUNE SYSTEM
04/10/19
Structure of RVFV Gn and human monoclonal antibody R12
RIFT VALLEY FEVER VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
rift valley fever virus
Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.
2.7
X-RAY DIFFRACTION
0.258
0.225
false
true
IGHV1
IGLV5
Lambda
null
null
null
null
null
sabdab_dataset/6iek/abangle/6iek.abangle
sabdab_dataset/6iek/annotation/6iek_E_VH.ann
sabdab_dataset/6iek/annotation/6iek_F_VL.ann
sabdab_dataset/6iek/imgt/6iek_E_H.ann
sabdab_dataset/6iek/imgt/6iek_F_L.ann
sabdab_dataset/6iek/sequence/6iek_raw.pdb
sabdab_dataset/6iek/sequence/6iek_E_VH.fa
sabdab_dataset/6iek/sequence/6iek_F_VL.fa
sabdab_dataset/6iek/structure/6iek.pdb
sabdab_dataset/6iek/structure/chothia/6iek.pdb
true
false
test
6ieq
D
E
0
B
protein
null
envelope glycoprotein gp160
VIRAL PROTEIN
09/16/18
Crystal Structure of HIV-1 Env ConM SOSIP.v7 in Complex with bNAb PGT124 and 35O22
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Han, B.W., Wilson, I.A.
3.9
X-RAY DIFFRACTION
0.296
0.247
false
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ieq/abangle/6ieq.abangle
sabdab_dataset/6ieq/annotation/6ieq_D_VH.ann
sabdab_dataset/6ieq/annotation/6ieq_E_VL.ann
sabdab_dataset/6ieq/imgt/6ieq_D_H.ann
sabdab_dataset/6ieq/imgt/6ieq_E_L.ann
sabdab_dataset/6ieq/sequence/6ieq_raw.pdb
sabdab_dataset/6ieq/sequence/6ieq_D_VH.fa
sabdab_dataset/6ieq/sequence/6ieq_E_VL.fa
sabdab_dataset/6ieq/structure/6ieq.pdb
sabdab_dataset/6ieq/structure/chothia/6ieq.pdb
false
false
test
6ieq
H
L
0
G
protein
null
envelope glycoprotein gp160
VIRAL PROTEIN
09/16/18
Crystal Structure of HIV-1 Env ConM SOSIP.v7 in Complex with bNAb PGT124 and 35O22
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Han, B.W., Wilson, I.A.
3.9
X-RAY DIFFRACTION
0.296
0.247
false
true
IGHV4
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ieq/abangle/6ieq.abangle
sabdab_dataset/6ieq/annotation/6ieq_H_VH.ann
sabdab_dataset/6ieq/annotation/6ieq_L_VL.ann
sabdab_dataset/6ieq/imgt/6ieq_H_H.ann
sabdab_dataset/6ieq/imgt/6ieq_L_L.ann
sabdab_dataset/6ieq/sequence/6ieq_raw.pdb
sabdab_dataset/6ieq/sequence/6ieq_H_VH.fa
sabdab_dataset/6ieq/sequence/6ieq_L_VL.fa
sabdab_dataset/6ieq/structure/6ieq.pdb
sabdab_dataset/6ieq/structure/chothia/6ieq.pdb
false
false
train
6igu
H
L
0
null
null
null
null
IMMUNE SYSTEM
09/26/18
Crystal structure of the hydrolytic antibody Fab 9C10
MUS MUSCULUS
mus musculus
mus musculus
null
Yamaguchi, A., Tada, T., Tsuchiya, Y., Tsumuraya, T., Fujii, I.
2.11
X-RAY DIFFRACTION
0.237
0.175
false
false
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/6igu/abangle/6igu.abangle
sabdab_dataset/6igu/annotation/6igu_H_VH.ann
sabdab_dataset/6igu/annotation/6igu_L_VL.ann
sabdab_dataset/6igu/imgt/6igu_H_H.ann
sabdab_dataset/6igu/imgt/6igu_L_L.ann
sabdab_dataset/6igu/sequence/6igu_raw.pdb
sabdab_dataset/6igu/sequence/6igu_H_VH.fa
sabdab_dataset/6igu/sequence/6igu_L_VL.fa
sabdab_dataset/6igu/structure/6igu.pdb
sabdab_dataset/6igu/structure/chothia/6igu.pdb
false
false
train
6ii4
E
F
0
C
protein
null
hemagglutinin
IMMUNE SYSTEM
10/03/18
Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a human neutralizing antibody L4A-14
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Jiang, H.H., Shi, Y., Qi, J., Gao, G.F.
3.3
X-RAY DIFFRACTION
0.276
0.227
false
true
IGHV3
IGLV6
Lambda
0
-10.613672
SPR
null
TBD
sabdab_dataset/6ii4/abangle/6ii4.abangle
sabdab_dataset/6ii4/annotation/6ii4_E_VH.ann
sabdab_dataset/6ii4/annotation/6ii4_F_VL.ann
sabdab_dataset/6ii4/imgt/6ii4_E_H.ann
sabdab_dataset/6ii4/imgt/6ii4_F_L.ann
sabdab_dataset/6ii4/sequence/6ii4_raw.pdb
sabdab_dataset/6ii4/sequence/6ii4_E_VH.fa
sabdab_dataset/6ii4/sequence/6ii4_F_VL.fa
sabdab_dataset/6ii4/structure/6ii4.pdb
sabdab_dataset/6ii4/structure/chothia/6ii4.pdb
true
false
train
6ii4
H
L
0
A
protein
null
hemagglutinin
IMMUNE SYSTEM
10/03/18
Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a human neutralizing antibody L4A-14
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Jiang, H.H., Shi, Y., Qi, J., Gao, G.F.
3.3
X-RAY DIFFRACTION
0.276
0.227
false
true
IGHV3
IGLV6
Lambda
0
-10.613672
SPR
null
TBD
sabdab_dataset/6ii4/abangle/6ii4.abangle
sabdab_dataset/6ii4/annotation/6ii4_H_VH.ann
sabdab_dataset/6ii4/annotation/6ii4_L_VL.ann
sabdab_dataset/6ii4/imgt/6ii4_H_H.ann
sabdab_dataset/6ii4/imgt/6ii4_L_L.ann
sabdab_dataset/6ii4/sequence/6ii4_raw.pdb
sabdab_dataset/6ii4/sequence/6ii4_H_VH.fa
sabdab_dataset/6ii4/sequence/6ii4_L_VL.fa
sabdab_dataset/6ii4/structure/6ii4.pdb
sabdab_dataset/6ii4/structure/chothia/6ii4.pdb
true
false
test
6ii8
G
I
0
A
protein
null
hemagglutinin
IMMUNE SYSTEM
10/03/18
Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a human neutralizing antibody L4B-18
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Jiang, H.H., Shi, Y., Qi, J., Gao, G.F.
3.32
X-RAY DIFFRACTION
0.251
0.203
false
true
IGHV3
IGLV6
Lambda
0
-8.74946
SPR
null
TBD
sabdab_dataset/6ii8/abangle/6ii8.abangle
sabdab_dataset/6ii8/annotation/6ii8_G_VH.ann
sabdab_dataset/6ii8/annotation/6ii8_I_VL.ann
sabdab_dataset/6ii8/imgt/6ii8_G_H.ann
sabdab_dataset/6ii8/imgt/6ii8_I_L.ann
sabdab_dataset/6ii8/sequence/6ii8_raw.pdb
sabdab_dataset/6ii8/sequence/6ii8_G_VH.fa
sabdab_dataset/6ii8/sequence/6ii8_I_VL.fa
sabdab_dataset/6ii8/structure/6ii8.pdb
sabdab_dataset/6ii8/structure/chothia/6ii8.pdb
true
false
train
6ii8
H
L
0
C
protein
null
hemagglutinin
IMMUNE SYSTEM
10/03/18
Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a human neutralizing antibody L4B-18
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Jiang, H.H., Shi, Y., Qi, J., Gao, G.F.
3.32
X-RAY DIFFRACTION
0.251
0.203
false
true
IGHV3
IGLV6
Lambda
0
-8.74946
SPR
null
TBD
sabdab_dataset/6ii8/abangle/6ii8.abangle
sabdab_dataset/6ii8/annotation/6ii8_H_VH.ann
sabdab_dataset/6ii8/annotation/6ii8_L_VL.ann
sabdab_dataset/6ii8/imgt/6ii8_H_H.ann
sabdab_dataset/6ii8/imgt/6ii8_L_L.ann
sabdab_dataset/6ii8/sequence/6ii8_raw.pdb
sabdab_dataset/6ii8/sequence/6ii8_H_VH.fa
sabdab_dataset/6ii8/sequence/6ii8_L_VL.fa
sabdab_dataset/6ii8/structure/6ii8.pdb
sabdab_dataset/6ii8/structure/chothia/6ii8.pdb
true
false
train
6ii8
J
K
0
E
protein
null
hemagglutinin
IMMUNE SYSTEM
10/03/18
Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a human neutralizing antibody L4B-18
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Jiang, H.H., Shi, Y., Qi, J., Gao, G.F.
3.32
X-RAY DIFFRACTION
0.251
0.203
false
true
IGHV3
IGLV6
Lambda
0
-8.74946
SPR
null
TBD
sabdab_dataset/6ii8/abangle/6ii8.abangle
sabdab_dataset/6ii8/annotation/6ii8_J_VH.ann
sabdab_dataset/6ii8/annotation/6ii8_K_VL.ann
sabdab_dataset/6ii8/imgt/6ii8_J_H.ann
sabdab_dataset/6ii8/imgt/6ii8_K_L.ann
sabdab_dataset/6ii8/sequence/6ii8_raw.pdb
sabdab_dataset/6ii8/sequence/6ii8_J_VH.fa
sabdab_dataset/6ii8/sequence/6ii8_K_VL.fa
sabdab_dataset/6ii8/structure/6ii8.pdb
sabdab_dataset/6ii8/structure/chothia/6ii8.pdb
true
false
train
6ii9
H
L
0
A
protein
null
hemagglutinin
IMMUNE SYSTEM
10/03/18
Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a human neutralizing antibody L3A-44
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Jiang, H.H., Shi, Y., Qi, J., Gao, G.F.
3.5
X-RAY DIFFRACTION
0.234
0.201
false
true
IGHV4
IGLV1
Lambda
0
-10.521321
SPR
null
TBD
sabdab_dataset/6ii9/abangle/6ii9.abangle
sabdab_dataset/6ii9/annotation/6ii9_H_VH.ann
sabdab_dataset/6ii9/annotation/6ii9_L_VL.ann
sabdab_dataset/6ii9/imgt/6ii9_H_H.ann
sabdab_dataset/6ii9/imgt/6ii9_L_L.ann
sabdab_dataset/6ii9/sequence/6ii9_raw.pdb
sabdab_dataset/6ii9/sequence/6ii9_H_VH.fa
sabdab_dataset/6ii9/sequence/6ii9_L_VL.fa
sabdab_dataset/6ii9/structure/6ii9.pdb
sabdab_dataset/6ii9/structure/chothia/6ii9.pdb
true
false
train
6ii9
M
N
0
C
protein
null
hemagglutinin
IMMUNE SYSTEM
10/03/18
Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a human neutralizing antibody L3A-44
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Jiang, H.H., Shi, Y., Qi, J., Gao, G.F.
3.5
X-RAY DIFFRACTION
0.234
0.201
false
true
IGHV4
IGLV1
Lambda
0
-10.521321
SPR
null
TBD
sabdab_dataset/6ii9/abangle/6ii9.abangle
sabdab_dataset/6ii9/annotation/6ii9_M_VH.ann
sabdab_dataset/6ii9/annotation/6ii9_N_VL.ann
sabdab_dataset/6ii9/imgt/6ii9_M_H.ann
sabdab_dataset/6ii9/imgt/6ii9_N_L.ann
sabdab_dataset/6ii9/sequence/6ii9_raw.pdb
sabdab_dataset/6ii9/sequence/6ii9_M_VH.fa
sabdab_dataset/6ii9/sequence/6ii9_N_VL.fa
sabdab_dataset/6ii9/structure/6ii9.pdb
sabdab_dataset/6ii9/structure/chothia/6ii9.pdb
true
false
train
6ii9
P
Q
0
E
protein
null
hemagglutinin
IMMUNE SYSTEM
10/03/18
Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a human neutralizing antibody L3A-44
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Jiang, H.H., Shi, Y., Qi, J., Gao, G.F.
3.5
X-RAY DIFFRACTION
0.234
0.201
false
true
IGHV4
IGLV1
Lambda
0
-10.521321
SPR
null
TBD
sabdab_dataset/6ii9/abangle/6ii9.abangle
sabdab_dataset/6ii9/annotation/6ii9_P_VH.ann
sabdab_dataset/6ii9/annotation/6ii9_Q_VL.ann
sabdab_dataset/6ii9/imgt/6ii9_P_H.ann
sabdab_dataset/6ii9/imgt/6ii9_Q_L.ann
sabdab_dataset/6ii9/sequence/6ii9_raw.pdb
sabdab_dataset/6ii9/sequence/6ii9_P_VH.fa
sabdab_dataset/6ii9/sequence/6ii9_Q_VL.fa
sabdab_dataset/6ii9/structure/6ii9.pdb
sabdab_dataset/6ii9/structure/chothia/6ii9.pdb
true
false
train
6ikm
A
a
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_a_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_a_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_a_H.ann
sabdab_dataset/6ikm/imgt/6ikm_a_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_a_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_a_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
test
6ikm
B
b
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_b_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_b_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_b_H.ann
sabdab_dataset/6ikm/imgt/6ikm_b_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_b_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_b_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
validation
6ikm
C
c
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_c_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_c_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_c_H.ann
sabdab_dataset/6ikm/imgt/6ikm_c_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_c_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_c_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
D
d
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_d_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_d_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_d_H.ann
sabdab_dataset/6ikm/imgt/6ikm_d_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_d_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_d_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
E
e
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_e_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_e_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_e_H.ann
sabdab_dataset/6ikm/imgt/6ikm_e_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_e_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_e_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
F
f
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_f_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_f_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_f_H.ann
sabdab_dataset/6ikm/imgt/6ikm_f_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_f_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_f_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
G
g
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_g_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_g_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_g_H.ann
sabdab_dataset/6ikm/imgt/6ikm_g_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_g_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_g_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
H
h
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_h_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_h_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_h_H.ann
sabdab_dataset/6ikm/imgt/6ikm_h_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_h_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_h_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
I
i
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_i_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_i_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_i_H.ann
sabdab_dataset/6ikm/imgt/6ikm_i_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_i_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_i_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
J
j
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_j_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_j_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_j_H.ann
sabdab_dataset/6ikm/imgt/6ikm_j_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_j_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_j_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
test
6ikm
K
k
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_k_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_k_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_k_H.ann
sabdab_dataset/6ikm/imgt/6ikm_k_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_k_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_k_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
L
l
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_l_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_l_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_l_H.ann
sabdab_dataset/6ikm/imgt/6ikm_l_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_l_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_l_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
M
m
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_m_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_m_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_m_H.ann
sabdab_dataset/6ikm/imgt/6ikm_m_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_m_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_m_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
test
6ikm
N
n
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_n_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_n_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_n_H.ann
sabdab_dataset/6ikm/imgt/6ikm_n_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_n_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_n_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
O
o
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_o_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_o_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_o_H.ann
sabdab_dataset/6ikm/imgt/6ikm_o_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_o_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_o_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
P
p
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_p_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_p_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_p_H.ann
sabdab_dataset/6ikm/imgt/6ikm_p_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_p_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_p_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
Q
q
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_q_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_q_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_q_H.ann
sabdab_dataset/6ikm/imgt/6ikm_q_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_q_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_q_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ikm
R
r
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
sabdab_dataset/6ikm/abangle/6ikm.abangle
sabdab_dataset/6ikm/annotation/6ikm_r_VH.ann
sabdab_dataset/6ikm/annotation/6ikm_r_VL.ann
sabdab_dataset/6ikm/imgt/6ikm_r_H.ann
sabdab_dataset/6ikm/imgt/6ikm_r_L.ann
sabdab_dataset/6ikm/sequence/6ikm_raw.pdb
sabdab_dataset/6ikm/sequence/6ikm_r_VH.fa
sabdab_dataset/6ikm/sequence/6ikm_r_VL.fa
sabdab_dataset/6ikm/structure/6ikm.pdb
sabdab_dataset/6ikm/structure/chothia/6ikm.pdb
false
false
train
6ion
H
L
0
A
protein
null
ly6/plaur domain-containing protein 3
IMMUNE SYSTEM
10/30/18
The complex of C4.4A with its antibody 11H10 Fab fragment
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Huang, M.D., Jiang, Y.B., Yuan, C., Lin, L.
2.75
X-RAY DIFFRACTION
0.255
0.197
false
false
IGHV8
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/6ion/abangle/6ion.abangle
sabdab_dataset/6ion/annotation/6ion_H_VH.ann
sabdab_dataset/6ion/annotation/6ion_L_VL.ann
sabdab_dataset/6ion/imgt/6ion_H_H.ann
sabdab_dataset/6ion/imgt/6ion_L_L.ann
sabdab_dataset/6ion/sequence/6ion_raw.pdb
sabdab_dataset/6ion/sequence/6ion_H_VH.fa
sabdab_dataset/6ion/sequence/6ion_L_VL.fa
sabdab_dataset/6ion/structure/6ion.pdb
sabdab_dataset/6ion/structure/chothia/6ion.pdb
true
false
train
6ir1
B
null
0
A
protein
null
mcherry fluorescent protein
FLUORESCENT PROTEIN
11/09/18
Crystal structure of red fluorescent protein mCherry complexed with the nanobody LaM4 at 1.9 Angstron resolution
ANAPLASMA MARGINALE; CAMELUS BACTRIANUS
camelus bactrianus
null
anaplasma marginale
Ding, Y., Wang, Z.Y., Hu, R.T., Chen, X.
1.919
X-RAY DIFFRACTION
0.232
0.180
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6ir1/annotation/6ir1_B_VH.ann
null
sabdab_dataset/6ir1/imgt/6ir1_B_H.ann
null
sabdab_dataset/6ir1/sequence/6ir1_raw.pdb
sabdab_dataset/6ir1/sequence/6ir1_B_VH.fa
null
sabdab_dataset/6ir1/structure/6ir1.pdb
sabdab_dataset/6ir1/structure/chothia/6ir1.pdb
true
true
test
6ir2
B
null
0
A
protein
null
mcherry fluorescent protein
FLUORESCENT PROTEIN
11/09/18
Crystal structure of red fluorescent protein mCherry complexed with the nanobody LaM2 at 1.4 Angstron resolution
ANAPLASMA MARGINALE; CAMELUS BACTRIANUS
camelus bactrianus
null
anaplasma marginale
Ding, Y., Wang, Z.Y., Hu, R.T., Chen, X.
1.393
X-RAY DIFFRACTION
0.216
0.195
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6ir2/annotation/6ir2_B_VH.ann
null
sabdab_dataset/6ir2/imgt/6ir2_B_H.ann
null
sabdab_dataset/6ir2/sequence/6ir2_raw.pdb
sabdab_dataset/6ir2/sequence/6ir2_B_VH.fa
null
sabdab_dataset/6ir2/structure/6ir2.pdb
sabdab_dataset/6ir2/structure/chothia/6ir2.pdb
false
false
train
6itc
C
null
0
G | A
protein | protein
NA | NA
green fluorescent protein | protein translocase subunit seca
PROTEIN TRANSPORT
11/21/18
Structure of a substrate engaged SecA-SecY protein translocation machine
BACILLUS SUBTILIS (STRAIN 168); GEOBACILLUS THERMODENITRIFICANS (STRAIN NG80-2); LAMA GLAMA; ESCHERICHIA COLI; AEQUOREA VICTORIA
lama glama
null
aequorea victoria | bacillus subtilis (strain 168)
Ma, C.Y., Wu, X.F., Sun, D.J., Park, E.Y., Rapoport, T.A., Gao, N., Long, L.
3.45
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6itc/annotation/6itc_C_VH.ann
null
sabdab_dataset/6itc/imgt/6itc_C_H.ann
null
sabdab_dataset/6itc/sequence/6itc_raw.pdb
sabdab_dataset/6itc/sequence/6itc_C_VH.fa
null
sabdab_dataset/6itc/structure/6itc.pdb
sabdab_dataset/6itc/structure/chothia/6itc.pdb
false
false
train
6itc
V
null
0
Y | E
protein | protein
NA | NA
protein translocase subunit secy | protein translocase subunit sece
PROTEIN TRANSPORT
11/21/18
Structure of a substrate engaged SecA-SecY protein translocation machine
BACILLUS SUBTILIS (STRAIN 168); GEOBACILLUS THERMODENITRIFICANS (STRAIN NG80-2); LAMA GLAMA; ESCHERICHIA COLI; AEQUOREA VICTORIA
lama glama
null
geobacillus thermodenitrificans (strain ng80-2) | geobacillus thermodenitrificans (strain ng80-2)
Ma, C.Y., Wu, X.F., Sun, D.J., Park, E.Y., Rapoport, T.A., Gao, N., Long, L.
3.45
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
null
sabdab_dataset/6itc/annotation/6itc_V_VH.ann
null
sabdab_dataset/6itc/imgt/6itc_V_H.ann
null
sabdab_dataset/6itc/sequence/6itc_raw.pdb
sabdab_dataset/6itc/sequence/6itc_V_VH.fa
null
sabdab_dataset/6itc/structure/6itc.pdb
sabdab_dataset/6itc/structure/chothia/6itc.pdb
false
false
train
6itp
A
null
0
A
Hapten
HCY
(11ALPHA,14BETA)-11,17,21-TRIHYDROXYPREGN-4-ENE-3,20-DIONE
IMMUNE SYSTEM
11/24/18
Crystal structure of cortisol complexed with its nanobody at pH 3.5
CAMELUS BACTRIANUS
camelus bactrianus
null
camelus bactrianus
Ding, Y., Ding, L.L., Wang, Z.Y., Zhong, P.Y.
1.572
X-RAY DIFFRACTION
0.223
0.195
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/6itp/annotation/6itp_A_VH.ann
null
null
null
sabdab_dataset/6itp/sequence/6itp_raw.pdb
sabdab_dataset/6itp/sequence/6itp_A_VH.fa
null
sabdab_dataset/6itp/structure/6itp.pdb
sabdab_dataset/6itp/structure/chothia/6itp.pdb
false
false
validation
6itp
B
null
0
B
Hapten
HCY
(11ALPHA,14BETA)-11,17,21-TRIHYDROXYPREGN-4-ENE-3,20-DIONE
IMMUNE SYSTEM
11/24/18
Crystal structure of cortisol complexed with its nanobody at pH 3.5
CAMELUS BACTRIANUS
camelus bactrianus
null
camelus bactrianus
Ding, Y., Ding, L.L., Wang, Z.Y., Zhong, P.Y.
1.572
X-RAY DIFFRACTION
0.223
0.195
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/6itp/annotation/6itp_B_VH.ann
null
null
null
sabdab_dataset/6itp/sequence/6itp_raw.pdb
sabdab_dataset/6itp/sequence/6itp_B_VH.fa
null
sabdab_dataset/6itp/structure/6itp.pdb
sabdab_dataset/6itp/structure/chothia/6itp.pdb
false
false
test
6itq
A
null
0
A
Hapten
HCY
(11ALPHA,14BETA)-11,17,21-TRIHYDROXYPREGN-4-ENE-3,20-DIONE
IMMUNE SYSTEM
11/24/18
Crystal structure of cortisol complexed with its nanobody at pH 10.5
CAMELUS BACTRIANUS
camelus bactrianus
null
camelus bactrianus
Ding, Y., Ding, L.L., Wang, Z.Y., Zhong, P.Y.
1.526
X-RAY DIFFRACTION
0.256
0.223
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/6itq/annotation/6itq_A_VH.ann
null
null
null
sabdab_dataset/6itq/sequence/6itq_raw.pdb
sabdab_dataset/6itq/sequence/6itq_A_VH.fa
null
sabdab_dataset/6itq/structure/6itq.pdb
sabdab_dataset/6itq/structure/chothia/6itq.pdb
true
false
validation
6itq
B
null
0
B
Hapten
HCY
(11ALPHA,14BETA)-11,17,21-TRIHYDROXYPREGN-4-ENE-3,20-DIONE
IMMUNE SYSTEM
11/24/18
Crystal structure of cortisol complexed with its nanobody at pH 10.5
CAMELUS BACTRIANUS
camelus bactrianus
null
camelus bactrianus
Ding, Y., Ding, L.L., Wang, Z.Y., Zhong, P.Y.
1.526
X-RAY DIFFRACTION
0.256
0.223
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/6itq/annotation/6itq_B_VH.ann
null
null
null
sabdab_dataset/6itq/sequence/6itq_raw.pdb
sabdab_dataset/6itq/sequence/6itq_B_VH.fa
null
sabdab_dataset/6itq/structure/6itq.pdb
sabdab_dataset/6itq/structure/chothia/6itq.pdb
true
false
test
6itq
C
null
0
C
Hapten
HCY
(11ALPHA,14BETA)-11,17,21-TRIHYDROXYPREGN-4-ENE-3,20-DIONE
IMMUNE SYSTEM
11/24/18
Crystal structure of cortisol complexed with its nanobody at pH 10.5
CAMELUS BACTRIANUS
camelus bactrianus
null
camelus bactrianus
Ding, Y., Ding, L.L., Wang, Z.Y., Zhong, P.Y.
1.526
X-RAY DIFFRACTION
0.256
0.223
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/6itq/annotation/6itq_C_VH.ann
null
null
null
sabdab_dataset/6itq/sequence/6itq_raw.pdb
sabdab_dataset/6itq/sequence/6itq_C_VH.fa
null
sabdab_dataset/6itq/structure/6itq.pdb
sabdab_dataset/6itq/structure/chothia/6itq.pdb
true
false
train