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  1. sabdab_dataset/1bog/abangle/1bog.abangle +2 -0
  2. sabdab_dataset/1bog/annotation/1bog_A_VL.ann +109 -0
  3. sabdab_dataset/1bog/annotation/1bog_B_VH.ann +112 -0
  4. sabdab_dataset/1bog/imgt/1bog_A_L.ann +4 -0
  5. sabdab_dataset/1bog/imgt/1bog_B_H.ann +4 -0
  6. sabdab_dataset/1bog/sequence/1bog_A_VL.fa +6 -0
  7. sabdab_dataset/1bog/sequence/1bog_B_VH.fa +6 -0
  8. sabdab_dataset/1bog/sequence/1bog_raw.pdb +6 -0
  9. sabdab_dataset/1bog/structure/1bog.pdb +0 -0
  10. sabdab_dataset/1bog/structure/chothia/1bog.pdb +0 -0
  11. sabdab_dataset/1dvf/abangle/1dvf.abangle +3 -0
  12. sabdab_dataset/1dvf/annotation/1dvf_A_VL.ann +108 -0
  13. sabdab_dataset/1dvf/annotation/1dvf_B_VH.ann +116 -0
  14. sabdab_dataset/1dvf/annotation/1dvf_C_VL.ann +107 -0
  15. sabdab_dataset/1dvf/annotation/1dvf_D_VH.ann +121 -0
  16. sabdab_dataset/1dvf/imgt/1dvf_A_L.ann +3 -0
  17. sabdab_dataset/1dvf/imgt/1dvf_B_H.ann +3 -0
  18. sabdab_dataset/1dvf/imgt/1dvf_C_L.ann +3 -0
  19. sabdab_dataset/1dvf/imgt/1dvf_D_H.ann +3 -0
  20. sabdab_dataset/1dvf/sequence/1dvf_A_VL.fa +6 -0
  21. sabdab_dataset/1dvf/sequence/1dvf_B_VH.fa +6 -0
  22. sabdab_dataset/1dvf/sequence/1dvf_C_VL.fa +6 -0
  23. sabdab_dataset/1dvf/sequence/1dvf_D_VH.fa +6 -0
  24. sabdab_dataset/1dvf/sequence/1dvf_raw.pdb +8 -0
  25. sabdab_dataset/1dvf/structure/1dvf.pdb +0 -0
  26. sabdab_dataset/1dvf/structure/chothia/1dvf.pdb +0 -0
  27. sabdab_dataset/1mak/annotation/1mak_A_VL.ann +113 -0
  28. sabdab_dataset/1mak/sequence/1mak_A_VL.fa +6 -0
  29. sabdab_dataset/1mak/sequence/1mak_raw.pdb +2 -0
  30. sabdab_dataset/1mak/structure/1mak.pdb +0 -0
  31. sabdab_dataset/1mak/structure/chothia/1mak.pdb +0 -0
  32. sabdab_dataset/1rfd/abangle/1rfd.abangle +2 -0
  33. sabdab_dataset/1rfd/annotation/1rfd_H_VH.ann +121 -0
  34. sabdab_dataset/1rfd/annotation/1rfd_L_VL.ann +114 -0
  35. sabdab_dataset/1rfd/imgt/1rfd_H_H.ann +4 -0
  36. sabdab_dataset/1rfd/imgt/1rfd_L_L.ann +4 -0
  37. sabdab_dataset/1rfd/sequence/1rfd_H_VH.fa +6 -0
  38. sabdab_dataset/1rfd/sequence/1rfd_L_VL.fa +6 -0
  39. sabdab_dataset/1rfd/sequence/1rfd_raw.pdb +4 -0
  40. sabdab_dataset/1rfd/structure/1rfd.pdb +0 -0
  41. sabdab_dataset/1rfd/structure/chothia/1rfd.pdb +0 -0
  42. sabdab_dataset/1u8k/abangle/1u8k.abangle +2 -0
  43. sabdab_dataset/1u8k/annotation/1u8k_A_VL.ann +110 -0
  44. sabdab_dataset/1u8k/annotation/1u8k_B_VH.ann +132 -0
  45. sabdab_dataset/1u8k/imgt/1u8k_A_L.ann +4 -0
  46. sabdab_dataset/1u8k/imgt/1u8k_B_H.ann +4 -0
  47. sabdab_dataset/1u8k/sequence/1u8k_A_VL.fa +6 -0
  48. sabdab_dataset/1u8k/sequence/1u8k_B_VH.fa +6 -0
  49. sabdab_dataset/1u8k/sequence/1u8k_raw.pdb +6 -0
  50. sabdab_dataset/1u8k/structure/1u8k.pdb +0 -0
sabdab_dataset/1bog/abangle/1bog.abangle ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1bog B A 0 -51.21 66.84 107.87 120.10 85.76 16.36
sabdab_dataset/1bog/annotation/1bog_A_VL.ann ADDED
@@ -0,0 +1,109 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 K
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+ L4 M
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+ L5 T
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+ L6 Q
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+ L7 S
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+ L8 P
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+ L10 S
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+ L11 M
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+ L12 Y
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+ L13 T
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+ L14 S
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+ L16 G
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+ L106 L
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+ L108 R
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+ L109 A
sabdab_dataset/1bog/annotation/1bog_B_VH.ann ADDED
@@ -0,0 +1,112 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 Q
2
+ H2 D
3
+ H3 Q
4
+ H4 L
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+ H5 Q
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+ H6 Q
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+ H7 S
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+ H8 G
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+ H9 A
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+ H10 E
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+ H11 L
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+ H12 V
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+ H13 R
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+ H14 P
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+ H15 G
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+ H16 A
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+ H17 S
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+ H18 V
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+ H19 K
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+ H20 L
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+ H21 S
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+ H22 C
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+ H23 K
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+ H24 A
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+ H25 L
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+ H26 G
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+ H27 Y
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+ H28 I
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+ H29 F
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+ H30 T
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+ H31 D
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+ H32 Y
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+ H34 I
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+ H37 V
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+ H112 S
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+ H113 A
sabdab_dataset/1bog/imgt/1bog_A_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGKC*01 IG IGKC IGKC IGKC NA True
3
+ J Mus_musculus IGKJ5*01 IG IGKJ IGKJ5 IGKJ5 NA True
4
+ V Mus_musculus IGKV14-111*01 IG IGKV IGKV14 IGKV14-111 NA True
sabdab_dataset/1bog/imgt/1bog_B_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGHG2C*01 IG IGHC IGHG2C IGHG2C IGg True
3
+ J Mus_musculus IGHJ3*01 IG IGHJ IGHJ3 IGHJ3 NA True
4
+ V Mus_musculus IGHV1S52*01 IG IGHV IGHV1 IGHV1S52 NA True
sabdab_dataset/1bog/sequence/1bog_A_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1bog_A|seqres|full
2
+ DIKMTQSPSSMYTSLGERVTITCKASQDINSFLTWFLQKPGKSPKTLIYRANRLMIGVPSRFSGSGSGQTYSLTISSLEYEDMGIYYCLQYDDFPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGTASVVCFLNNFYPKEINVKWKIDGSERQNGVLDSWTEQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
3
+ >1bog_A|seqres|region: L
4
+ DIKMTQSPSSMYTSLGERVTITCKASQDINSFLTWFLQKPGKSPKTLIYRANRLMIGVPSRFSGSGSGQTYSLTISSLEYEDMGIYYCLQYDDFPLTFGAGTKLDLKRA---------------------------------------------------------------------------------------------------------
5
+ >1bog_A|structure|full
6
+ DIKMTQSPSSMYTSLGERVTITCKASQDINSFLTWFLQKPGKSPKTLIYRANRLMIGVPSRFSGSGSGQTYSLTISSLEYEDMGIYYCLQYDDFPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGTASVVCFLNNFYPKEINVKWKIDGSERQNGVLDSWTEQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
sabdab_dataset/1bog/sequence/1bog_B_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1bog_B|seqres|full
2
+ QDQLQQSGAELVRPGASVKLSCKALGYIFTDYEIHWVKQTPVHGLEWIGGIHPGSSGTAYNQKFKGKATLTADKSSTTAFMELSSLTSEDSAVYYCTRKDYWGQGTLVTVSAAKTTAPSVYPLVPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRV
3
+ >1bog_B|seqres|region: H
4
+ QDQLQQSGAELVRPGASVKLSCKALGYIFTDYEIHWVKQTPVHGLEWIGGIHPGSSGTAYNQKFKGKATLTADKSSTTAFMELSSLTSEDSAVYYCTRKDYWGQGTLVTVSA-----------------------------------------------------------------------------------------------------
5
+ >1bog_B|structure|full
6
+ QDQLQQSGAELVRPGASVKLSCKALGYIFTDYEIHWVKQTPVHGLEWIGGIHPGSSGTAYNQKFKGKATLTADKSSTTAFMELSSLTSEDSAVYYCTRKDYWGQGTLVTVSAAKTTAPSVYPLVPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRV
sabdab_dataset/1bog/sequence/1bog_raw.pdb ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1bog_A|type: L
2
+ DIKMTQSPSSMYTSLGERVTITCKASQDINSFLTWFLQKPGKSPKTLIYRANRLMIGVPSRFSGSGSGQTYSLTISSLEYEDMGIYYCLQYDDFPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGTASVVCFLNNFYPKEINVKWKIDGSERQNGVLDSWTEQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
3
+ >1bog_C|type: non-ab
4
+ GATPEDLNQKL
5
+ >1bog_B|type: H
6
+ QDQLQQSGAELVRPGASVKLSCKALGYIFTDYEIHWVKQTPVHGLEWIGGIHPGSSGTAYNQKFKGKATLTADKSSTTAFMELSSLTSEDSAVYYCTRKDYWGQGTLVTVSAAKTTAPSVYPLVPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPRV
sabdab_dataset/1bog/structure/1bog.pdb ADDED
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sabdab_dataset/1bog/structure/chothia/1bog.pdb ADDED
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sabdab_dataset/1dvf/abangle/1dvf.abangle ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1dvf B A 0 -55.25 69.56 119.37 121.22 80.94 16.41
3
+ 1dvf D C 0 -63.08 72.16 114.14 122.38 77.80 15.86
sabdab_dataset/1dvf/annotation/1dvf_A_VL.ann ADDED
@@ -0,0 +1,108 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
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+ L2 I
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+ L3 V
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+ L4 L
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+ L5 T
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+ L6 Q
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+ L7 S
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+ L8 P
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sabdab_dataset/1dvf/annotation/1dvf_B_VH.ann ADDED
@@ -0,0 +1,116 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ H1 Q
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+ H113 S
sabdab_dataset/1dvf/annotation/1dvf_C_VL.ann ADDED
@@ -0,0 +1,107 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 Q
4
+ L4 L
5
+ L5 T
6
+ L6 Q
7
+ L7 S
8
+ L8 P
9
+ L9 S
10
+ L10 S
11
+ L11 L
12
+ L12 S
13
+ L13 A
14
+ L14 S
15
+ L15 L
16
+ L16 G
17
+ L17 D
18
+ L18 R
19
+ L19 V
20
+ L20 T
21
+ L21 I
22
+ L22 S
23
+ L23 C
24
+ L24 R
25
+ L25 A
26
+ L26 S
27
+ L27 Q
28
+ L28 D
29
+ L29 I
30
+ L30 S
31
+ L31 N
32
+ L32 Y
33
+ L33 L
34
+ L34 N
35
+ L35 W
36
+ L36 Y
37
+ L37 Q
38
+ L38 Q
39
+ L39 K
40
+ L40 P
41
+ L41 D
42
+ L42 G
43
+ L43 T
44
+ L44 V
45
+ L45 K
46
+ L46 L
47
+ L47 L
48
+ L48 I
49
+ L49 Y
50
+ L50 Y
51
+ L51 T
52
+ L52 S
53
+ L53 R
54
+ L54 L
55
+ L55 H
56
+ L56 S
57
+ L57 G
58
+ L58 V
59
+ L59 P
60
+ L60 S
61
+ L61 R
62
+ L62 F
63
+ L63 S
64
+ L64 G
65
+ L65 S
66
+ L66 G
67
+ L67 S
68
+ L68 G
69
+ L69 T
70
+ L70 D
71
+ L71 Y
72
+ L72 S
73
+ L73 L
74
+ L74 T
75
+ L75 I
76
+ L76 S
77
+ L77 N
78
+ L78 L
79
+ L79 E
80
+ L80 Q
81
+ L81 E
82
+ L82 D
83
+ L83 I
84
+ L84 A
85
+ L85 T
86
+ L86 Y
87
+ L87 F
88
+ L88 C
89
+ L89 Q
90
+ L90 Q
91
+ L91 G
92
+ L92 N
93
+ L93 T
94
+ L94 L
95
+ L95 P
96
+ L96 W
97
+ L97 T
98
+ L98 F
99
+ L99 G
100
+ L100 G
101
+ L101 G
102
+ L102 T
103
+ L103 K
104
+ L104 L
105
+ L105 E
106
+ L106 I
107
+ L107 K
sabdab_dataset/1dvf/annotation/1dvf_D_VH.ann ADDED
@@ -0,0 +1,121 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 Q
2
+ H2 V
3
+ H3 Q
4
+ H4 L
5
+ H5 Q
6
+ H6 Q
7
+ H7 S
8
+ H8 G
9
+ H9 T
10
+ H10 E
11
+ H11 L
12
+ H12 V
13
+ H13 K
14
+ H14 S
15
+ H15 G
16
+ H16 A
17
+ H17 S
18
+ H18 V
19
+ H19 K
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 T
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 F
28
+ H28 N
29
+ H29 I
30
+ H30 K
31
+ H31 D
32
+ H32 T
33
+ H33 H
34
+ H34 M
35
+ H35 N
36
+ H36 W
37
+ H37 V
38
+ H38 K
39
+ H39 Q
40
+ H40 R
41
+ H41 P
42
+ H42 E
43
+ H43 Q
44
+ H44 G
45
+ H45 L
46
+ H46 E
47
+ H47 W
48
+ H48 I
49
+ H49 G
50
+ H50 R
51
+ H51 I
52
+ H52 D
53
+ H52A P
54
+ H53 A
55
+ H54 N
56
+ H55 G
57
+ H56 N
58
+ H57 I
59
+ H58 Q
60
+ H59 Y
61
+ H60 D
62
+ H61 P
63
+ H62 K
64
+ H63 F
65
+ H64 R
66
+ H65 G
67
+ H66 K
68
+ H67 A
69
+ H68 T
70
+ H69 I
71
+ H70 T
72
+ H71 A
73
+ H72 D
74
+ H73 T
75
+ H74 S
76
+ H75 S
77
+ H76 N
78
+ H77 T
79
+ H78 A
80
+ H79 Y
81
+ H80 L
82
+ H81 Q
83
+ H82 L
84
+ H82A S
85
+ H82B S
86
+ H82C L
87
+ H83 T
88
+ H84 S
89
+ H85 E
90
+ H86 D
91
+ H87 T
92
+ H88 A
93
+ H89 V
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 A
98
+ H94 T
99
+ H95 K
100
+ H96 V
101
+ H97 I
102
+ H98 Y
103
+ H99 Y
104
+ H100 Q
105
+ H100A G
106
+ H100B R
107
+ H100C G
108
+ H100D A
109
+ H100E M
110
+ H101 D
111
+ H102 Y
112
+ H103 W
113
+ H104 G
114
+ H105 Q
115
+ H106 G
116
+ H107 T
117
+ H108 T
118
+ H109 L
119
+ H110 T
120
+ H111 V
121
+ H112 S
sabdab_dataset/1dvf/imgt/1dvf_A_L.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGKJ1*01 IG IGKJ IGKJ1 IGKJ1 NA True
3
+ V Mus_musculus IGKV12-41*02 IG IGKV IGKV12 IGKV12-41 NA True
sabdab_dataset/1dvf/imgt/1dvf_B_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGHJ2*01 IG IGHJ IGHJ2 IGHJ2 NA True
3
+ V Mus_musculus IGHV2-6-7*01 IG IGHV IGHV2 IGHV2-6-7 NA True
sabdab_dataset/1dvf/imgt/1dvf_C_L.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGKJ1*01 IG IGKJ IGKJ1 IGKJ1 NA True
3
+ V Mus_musculus IGKV10-96*01 IG IGKV IGKV10 IGKV10-96 NA True
sabdab_dataset/1dvf/imgt/1dvf_D_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGHJ2*01 IG IGHJ IGHJ2 IGHJ2 NA True
3
+ V Mus_musculus IGHV14-3*02 IG IGHV IGHV14 IGHV14-3 NA True
sabdab_dataset/1dvf/sequence/1dvf_A_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1dvf_A|seqres|full
2
+ DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPRTFGGGTKLEIKR
3
+ >1dvf_A|seqres|region: L
4
+ DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPRTFGGGTKLEIKR
5
+ >1dvf_A|structure|full
6
+ DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPRTFGGGTKLEIK-
sabdab_dataset/1dvf/sequence/1dvf_B_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1dvf_B|seqres|full
2
+ QVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERDYRLDYWGQGTTLTVSS
3
+ >1dvf_B|seqres|region: H
4
+ QVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERDYRLDYWGQGTTLTVSS
5
+ >1dvf_B|structure|full
6
+ QVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERDYRLDYWGQGTTLTVSS
sabdab_dataset/1dvf/sequence/1dvf_C_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1dvf_C|seqres|full
2
+ DIQLTQSPSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKLEIK
3
+ >1dvf_C|seqres|region: L
4
+ DIQLTQSPSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKLEIK
5
+ >1dvf_C|structure|full
6
+ DIQLTQSPSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKLEIK
sabdab_dataset/1dvf/sequence/1dvf_D_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1dvf_D|seqres|full
2
+ QVQLQQSGTELVKSGASVKLSCTASGFNIKDTHMNWVKQRPEQGLEWIGRIDPANGNIQYDPKFRGKATITADTSSNTAYLQLSSLTSEDTAVYYCATKVIYYQGRGAMDYWGQGTTLTVS
3
+ >1dvf_D|seqres|region: H
4
+ QVQLQQSGTELVKSGASVKLSCTASGFNIKDTHMNWVKQRPEQGLEWIGRIDPANGNIQYDPKFRGKATITADTSSNTAYLQLSSLTSEDTAVYYCATKVIYYQGRGAMDYWGQGTTLTVS
5
+ >1dvf_D|structure|full
6
+ QVQLQQSGTELVKSGASVKLSCTASGFNIKDTHMNWVKQRPEQGLEWIGRIDPANGNIQYDPKFRGKATITADTSSNTAYLQLSSLTSEDTAVYYCATKVIYYQGRGAMDYWGQGTTLTVS
sabdab_dataset/1dvf/sequence/1dvf_raw.pdb ADDED
@@ -0,0 +1,8 @@
 
 
 
 
 
 
 
 
 
1
+ >1dvf_A|type: L
2
+ DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPRTFGGGTKLEIKR
3
+ >1dvf_C|type: L
4
+ DIQLTQSPSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKLEIK
5
+ >1dvf_B|type: H
6
+ QVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERDYRLDYWGQGTTLTVSS
7
+ >1dvf_D|type: H
8
+ QVQLQQSGTELVKSGASVKLSCTASGFNIKDTHMNWVKQRPEQGLEWIGRIDPANGNIQYDPKFRGKATITADTSSNTAYLQLSSLTSEDTAVYYCATKVIYYQGRGAMDYWGQGTTLTVS
sabdab_dataset/1dvf/structure/1dvf.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1dvf/structure/chothia/1dvf.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1mak/annotation/1mak_A_VL.ann ADDED
@@ -0,0 +1,113 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 V
3
+ L3 V
4
+ L4 M
5
+ L5 T
6
+ L6 Q
7
+ L7 T
8
+ L8 P
9
+ L9 L
10
+ L10 S
11
+ L11 L
12
+ L12 P
13
+ L13 V
14
+ L14 S
15
+ L15 L
16
+ L16 G
17
+ L17 D
18
+ L18 Q
19
+ L19 A
20
+ L20 S
21
+ L21 I
22
+ L22 S
23
+ L23 C
24
+ L24 R
25
+ L25 S
26
+ L26 S
27
+ L27 Q
28
+ L28 S
29
+ L29 L
30
+ L30 V
31
+ L30A H
32
+ L30B S
33
+ L30C N
34
+ L30D G
35
+ L30E N
36
+ L31 T
37
+ L32 Y
38
+ L33 L
39
+ L34 N
40
+ L35 W
41
+ L36 Y
42
+ L37 L
43
+ L38 Q
44
+ L39 K
45
+ L40 A
46
+ L41 G
47
+ L42 Q
48
+ L43 S
49
+ L44 P
50
+ L45 K
51
+ L46 L
52
+ L47 L
53
+ L48 I
54
+ L49 Y
55
+ L50 K
56
+ L51 V
57
+ L52 S
58
+ L53 N
59
+ L54 R
60
+ L55 F
61
+ L56 S
62
+ L57 G
63
+ L58 V
64
+ L59 P
65
+ L60 D
66
+ L61 R
67
+ L62 F
68
+ L63 S
69
+ L64 G
70
+ L65 S
71
+ L66 G
72
+ L67 S
73
+ L68 G
74
+ L69 T
75
+ L70 D
76
+ L71 F
77
+ L72 T
78
+ L73 L
79
+ L74 K
80
+ L75 I
81
+ L76 S
82
+ L77 R
83
+ L78 V
84
+ L79 E
85
+ L80 A
86
+ L81 E
87
+ L82 D
88
+ L83 L
89
+ L84 G
90
+ L85 I
91
+ L86 Y
92
+ L87 F
93
+ L88 C
94
+ L89 S
95
+ L90 Q
96
+ L91 T
97
+ L92 T
98
+ L93 H
99
+ L94 V
100
+ L95 P
101
+ L96 P
102
+ L97 T
103
+ L98 F
104
+ L99 G
105
+ L100 G
106
+ L101 G
107
+ L102 T
108
+ L103 K
109
+ L104 L
110
+ L105 E
111
+ L106 I
112
+ L107 K
113
+ L108 R
sabdab_dataset/1mak/sequence/1mak_A_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1mak_A|seqres|full
2
+ DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLNWYLQKAGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQTTHVPPTFGGGTKLEIKR
3
+ >1mak_A|seqres|region: L
4
+ DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLNWYLQKAGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQTTHVPPTFGGGTKLEIKR
5
+ >1mak_A|structure|full
6
+ DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLNWYLQKAGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQTTHVPPTFGGGTKLEIKR
sabdab_dataset/1mak/sequence/1mak_raw.pdb ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ >1mak_A|type: L
2
+ DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLNWYLQKAGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQTTHVPPTFGGGTKLEIKR
sabdab_dataset/1mak/structure/1mak.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1mak/structure/chothia/1mak.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1rfd/abangle/1rfd.abangle ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1rfd H L 0 -57.89 71.38 115.95 118.55 87.53 16.19
sabdab_dataset/1rfd/annotation/1rfd_H_VH.ann ADDED
@@ -0,0 +1,121 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 E
2
+ H2 V
3
+ H3 T
4
+ H4 L
5
+ H5 Q
6
+ H6 E
7
+ H7 S
8
+ H8 G
9
+ H9 G
10
+ H10 G
11
+ H11 L
12
+ H12 V
13
+ H13 Q
14
+ H14 P
15
+ H15 G
16
+ H16 G
17
+ H17 S
18
+ H18 M
19
+ H19 K
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 A
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 F
28
+ H28 T
29
+ H29 F
30
+ H30 S
31
+ H31 D
32
+ H32 A
33
+ H33 W
34
+ H34 V
35
+ H35 D
36
+ H36 W
37
+ H37 V
38
+ H38 R
39
+ H39 Q
40
+ H40 S
41
+ H41 P
42
+ H42 G
43
+ H43 K
44
+ H44 G
45
+ H45 L
46
+ H46 E
47
+ H47 W
48
+ H48 V
49
+ H49 A
50
+ H50 E
51
+ H51 I
52
+ H52 R
53
+ H52A N
54
+ H52B K
55
+ H52C A
56
+ H53 N
57
+ H54 N
58
+ H55 H
59
+ H56 A
60
+ H57 T
61
+ H58 K
62
+ H59 Y
63
+ H60 T
64
+ H61 E
65
+ H62 S
66
+ H63 V
67
+ H64 K
68
+ H65 G
69
+ H66 R
70
+ H67 F
71
+ H68 T
72
+ H69 I
73
+ H70 S
74
+ H71 R
75
+ H72 D
76
+ H73 D
77
+ H74 S
78
+ H75 K
79
+ H76 S
80
+ H77 S
81
+ H78 V
82
+ H79 Y
83
+ H80 L
84
+ H81 Q
85
+ H82 M
86
+ H82A N
87
+ H82B S
88
+ H82C L
89
+ H83 R
90
+ H84 A
91
+ H85 E
92
+ H86 D
93
+ H87 T
94
+ H88 G
95
+ H89 I
96
+ H90 Y
97
+ H91 Y
98
+ H92 C
99
+ H93 T
100
+ H94 S
101
+ H95 V
102
+ H96 P
103
+ H97 Q
104
+ H98 L
105
+ H99 G
106
+ H100 R
107
+ H100A G
108
+ H100B F
109
+ H101 A
110
+ H102 Y
111
+ H103 W
112
+ H104 G
113
+ H105 Q
114
+ H106 G
115
+ H107 T
116
+ H108 L
117
+ H109 V
118
+ H110 T
119
+ H111 V
120
+ H112 S
121
+ H113 A
sabdab_dataset/1rfd/annotation/1rfd_L_VL.ann ADDED
@@ -0,0 +1,114 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 V
4
+ L4 M
5
+ L5 T
6
+ L6 Q
7
+ L7 A
8
+ L8 A
9
+ L9 P
10
+ L10 S
11
+ L11 V
12
+ L12 P
13
+ L13 V
14
+ L14 T
15
+ L15 P
16
+ L16 G
17
+ L17 E
18
+ L18 S
19
+ L19 V
20
+ L20 S
21
+ L21 I
22
+ L22 S
23
+ L23 C
24
+ L24 R
25
+ L25 S
26
+ L26 S
27
+ L27 K
28
+ L28 S
29
+ L29 L
30
+ L30 L
31
+ L30A H
32
+ L30B S
33
+ L30C N
34
+ L30D G
35
+ L30E Y
36
+ L31 T
37
+ L32 Y
38
+ L33 L
39
+ L34 H
40
+ L35 W
41
+ L36 F
42
+ L37 L
43
+ L38 Q
44
+ L39 R
45
+ L40 P
46
+ L41 G
47
+ L42 Q
48
+ L43 S
49
+ L44 P
50
+ L45 Q
51
+ L46 L
52
+ L47 L
53
+ L48 I
54
+ L49 Y
55
+ L50 R
56
+ L51 V
57
+ L52 S
58
+ L53 N
59
+ L54 L
60
+ L55 A
61
+ L56 S
62
+ L57 G
63
+ L58 V
64
+ L59 P
65
+ L60 D
66
+ L61 R
67
+ L62 F
68
+ L63 S
69
+ L64 G
70
+ L65 S
71
+ L66 G
72
+ L67 S
73
+ L68 G
74
+ L69 T
75
+ L70 A
76
+ L71 F
77
+ L72 T
78
+ L73 L
79
+ L74 R
80
+ L75 F
81
+ L76 S
82
+ L77 R
83
+ L78 V
84
+ L79 E
85
+ L80 A
86
+ L81 E
87
+ L82 D
88
+ L83 V
89
+ L84 G
90
+ L85 V
91
+ L86 Y
92
+ L87 Y
93
+ L88 C
94
+ L89 M
95
+ L90 Q
96
+ L91 H
97
+ L92 L
98
+ L93 E
99
+ L94 Y
100
+ L95 P
101
+ L96 F
102
+ L97 T
103
+ L98 F
104
+ L99 G
105
+ L100 S
106
+ L101 G
107
+ L102 T
108
+ L103 K
109
+ L104 L
110
+ L105 E
111
+ L106 I
112
+ L107 K
113
+ L108 R
114
+ L109 A
sabdab_dataset/1rfd/imgt/1rfd_H_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGHG1*02 IG IGHC IGHG1 IGHG1 IGg True
3
+ J Mus_musculus IGHJ3*01 IG IGHJ IGHJ3 IGHJ3 NA True
4
+ V Mus_musculus IGHV6-6*01 IG IGHV IGHV6 IGHV6-6 NA True
sabdab_dataset/1rfd/imgt/1rfd_L_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGKC*01 IG IGKC IGKC IGKC NA True
3
+ J Mus_musculus IGKJ4*01 IG IGKJ IGKJ4 IGKJ4 NA True
4
+ V Mus_musculus IGKV2-137*01 IG IGKV IGKV2 IGKV2-137 NA True
sabdab_dataset/1rfd/sequence/1rfd_H_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1rfd_H|seqres|full
2
+ EVTLQESGGGLVQPGGSMKLSCAASGFTFSDAWVDWVRQSPGKGLEWVAEIRNKANNHATKYTESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCTSVPQLGRGFAYWGQGTLVTVSAASTTPPSVYPLAPGSGGASTSGSMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTQVDKKIVPK
3
+ >1rfd_H|seqres|region: H
4
+ EVTLQESGGGLVQPGGSMKLSCAASGFTFSDAWVDWVRQSPGKGLEWVAEIRNKANNHATKYTESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCTSVPQLGRGFAYWGQGTLVTVSA------------------------------------------------------------------------------------------------------
5
+ >1rfd_H|structure|full
6
+ EVTLQESGGGLVQPGGSMKLSCAASGFTFSDAWVDWVRQSPGKGLEWVAEIRNKANNHATKYTESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCTSVPQLGRGFAYWGQGTLVTVSAASTTPPSVYPLAPGSGGA---GSMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTQVDKKIVPK
sabdab_dataset/1rfd/sequence/1rfd_L_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1rfd_L|seqres|full
2
+ DIVMTQAAPSVPVTPGESVSISCRSSKSLLHSNGYTYLHWFLQRPGQSPQLLIYRVSNLASGVPDRFSGSGSGTAFTLRFSRVEAEDVGVYYCMQHLEYPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPQDITVSWKIDGAERSSGVLNSWTDQDSSDSTYSMSSTLTLTKDEYERHSSYTCEATHKTSTSPITKSFNRGE
3
+ >1rfd_L|seqres|region: L
4
+ DIVMTQAAPSVPVTPGESVSISCRSSKSLLHSNGYTYLHWFLQRPGQSPQLLIYRVSNLASGVPDRFSGSGSGTAFTLRFSRVEAEDVGVYYCMQHLEYPFTFGSGTKLEIKRA--------------------------------------------------------------------------------------------------------
5
+ >1rfd_L|structure|full
6
+ DIVMTQAAPSVPVTPGESVSISCRSSKSLLHSNGYTYLHWFLQRPGQSPQLLIYRVSNLASGVPDRFSGSGSGTAFTLRFSRVEAEDVGVYYCMQHLEYPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPQDITVSWKIDGAERSSGVLNSWTDQDSSDSTYSMSSTLTLTKDEYERHSSYTCEATHKTSTSPITKSFNRGE
sabdab_dataset/1rfd/sequence/1rfd_raw.pdb ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ >1rfd_H|type: H
2
+ EVTLQESGGGLVQPGGSMKLSCAASGFTFSDAWVDWVRQSPGKGLEWVAEIRNKANNHATKYTESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCTSVPQLGRGFAYWGQGTLVTVSAASTTPPSVYPLAPGSGGASTSGSMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTQVDKKIVPK
3
+ >1rfd_L|type: L
4
+ DIVMTQAAPSVPVTPGESVSISCRSSKSLLHSNGYTYLHWFLQRPGQSPQLLIYRVSNLASGVPDRFSGSGSGTAFTLRFSRVEAEDVGVYYCMQHLEYPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPQDITVSWKIDGAERSSGVLNSWTDQDSSDSTYSMSSTLTLTKDEYERHSSYTCEATHKTSTSPITKSFNRGE
sabdab_dataset/1rfd/structure/1rfd.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1rfd/structure/chothia/1rfd.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1u8k/abangle/1u8k.abangle ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1u8k B A 0 -56.85 68.95 118.33 123.07 83.58 15.89
sabdab_dataset/1u8k/annotation/1u8k_A_VL.ann ADDED
@@ -0,0 +1,110 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 A
2
+ L2 L
3
+ L3 Q
4
+ L4 L
5
+ L5 T
6
+ L6 Q
7
+ L7 S
8
+ L8 P
9
+ L9 S
10
+ L10 S
11
+ L11 L
12
+ L12 S
13
+ L13 A
14
+ L14 S
15
+ L15 V
16
+ L16 G
17
+ L17 D
18
+ L18 R
19
+ L19 I
20
+ L20 T
21
+ L21 I
22
+ L22 T
23
+ L23 C
24
+ L24 R
25
+ L25 A
26
+ L26 S
27
+ L27 Q
28
+ L28 G
29
+ L29 V
30
+ L30 T
31
+ L31 S
32
+ L32 A
33
+ L33 L
34
+ L34 A
35
+ L35 W
36
+ L36 Y
37
+ L37 R
38
+ L38 Q
39
+ L39 K
40
+ L40 P
41
+ L41 G
42
+ L42 S
43
+ L43 P
44
+ L44 P
45
+ L45 Q
46
+ L46 L
47
+ L47 L
48
+ L48 I
49
+ L49 Y
50
+ L50 D
51
+ L51 A
52
+ L52 S
53
+ L53 S
54
+ L54 L
55
+ L55 E
56
+ L56 S
57
+ L57 G
58
+ L58 V
59
+ L59 P
60
+ L60 S
61
+ L61 R
62
+ L62 F
63
+ L63 S
64
+ L64 G
65
+ L65 S
66
+ L66 G
67
+ L67 S
68
+ L68 G
69
+ L69 T
70
+ L70 E
71
+ L71 F
72
+ L72 T
73
+ L73 L
74
+ L74 T
75
+ L75 I
76
+ L76 S
77
+ L77 T
78
+ L78 L
79
+ L79 R
80
+ L80 P
81
+ L81 E
82
+ L82 D
83
+ L83 F
84
+ L84 A
85
+ L85 T
86
+ L86 Y
87
+ L87 Y
88
+ L88 C
89
+ L89 Q
90
+ L90 Q
91
+ L91 L
92
+ L92 H
93
+ L93 F
94
+ L94 Y
95
+ L95 P
96
+ L96 H
97
+ L97 T
98
+ L98 F
99
+ L99 G
100
+ L100 G
101
+ L101 G
102
+ L102 T
103
+ L103 R
104
+ L104 V
105
+ L105 D
106
+ L106 V
107
+ L107 R
108
+ L108 R
109
+ L109 T
110
+ L110 V
sabdab_dataset/1u8k/annotation/1u8k_B_VH.ann ADDED
@@ -0,0 +1,132 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 R
2
+ H2 I
3
+ H3 T
4
+ H4 L
5
+ H5 K
6
+ H6 E
7
+ H7 S
8
+ H8 G
9
+ H9 P
10
+ H10 P
11
+ H11 L
12
+ H12 V
13
+ H13 K
14
+ H14 P
15
+ H15 T
16
+ H16 Q
17
+ H17 T
18
+ H18 L
19
+ H19 T
20
+ H20 L
21
+ H21 T
22
+ H22 C
23
+ H23 S
24
+ H24 F
25
+ H25 S
26
+ H26 G
27
+ H27 F
28
+ H28 S
29
+ H29 L
30
+ H30 S
31
+ H31 D
32
+ H31A F
33
+ H31B G
34
+ H32 V
35
+ H33 G
36
+ H34 V
37
+ H35 G
38
+ H36 W
39
+ H37 I
40
+ H38 R
41
+ H39 Q
42
+ H40 P
43
+ H41 P
44
+ H42 G
45
+ H43 K
46
+ H44 A
47
+ H45 L
48
+ H46 E
49
+ H47 W
50
+ H48 L
51
+ H49 A
52
+ H50 I
53
+ H51 I
54
+ H52 Y
55
+ H53 S
56
+ H54 D
57
+ H55 D
58
+ H56 D
59
+ H57 K
60
+ H58 R
61
+ H59 Y
62
+ H60 S
63
+ H61 P
64
+ H62 S
65
+ H63 L
66
+ H64 N
67
+ H65 T
68
+ H66 R
69
+ H67 L
70
+ H68 T
71
+ H69 I
72
+ H70 T
73
+ H71 K
74
+ H72 D
75
+ H73 T
76
+ H74 S
77
+ H75 K
78
+ H76 N
79
+ H77 Q
80
+ H78 V
81
+ H79 V
82
+ H80 L
83
+ H81 V
84
+ H82 M
85
+ H82A T
86
+ H82B R
87
+ H82C V
88
+ H83 S
89
+ H84 P
90
+ H85 V
91
+ H86 D
92
+ H87 T
93
+ H88 A
94
+ H89 T
95
+ H90 Y
96
+ H91 F
97
+ H92 C
98
+ H93 A
99
+ H94 H
100
+ H95 R
101
+ H96 R
102
+ H97 G
103
+ H98 P
104
+ H99 T
105
+ H100 T
106
+ H100A L
107
+ H100B F
108
+ H100C G
109
+ H100D V
110
+ H100E P
111
+ H100F I
112
+ H100G A
113
+ H100H R
114
+ H100I G
115
+ H100J P
116
+ H100K V
117
+ H100L N
118
+ H100M A
119
+ H100N M
120
+ H101 D
121
+ H102 V
122
+ H103 W
123
+ H104 G
124
+ H105 Q
125
+ H106 G
126
+ H107 I
127
+ H108 T
128
+ H109 V
129
+ H110 T
130
+ H111 I
131
+ H112 S
132
+ H113 S
sabdab_dataset/1u8k/imgt/1u8k_A_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Homo_sapiens IGKC*01 IG IGKC IGKC IGKC NA True
3
+ J Homo_sapiens IGKJ4*01 IG IGKJ IGKJ4 IGKJ4 NA True
4
+ V Homo_sapiens IGKV1-13*02 IG IGKV IGKV1 IGKV1-13 NA True
sabdab_dataset/1u8k/imgt/1u8k_B_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Homo_sapiens IGHG3*01 IG IGHC IGHG3 IGHG3 IGg True
3
+ J Homo_sapiens IGHJ6*01 IG IGHJ IGHJ6 IGHJ6 NA True
4
+ V Homo_sapiens IGHV2-5*05 IG IGHV IGHV2 IGHV2-5 NA True
sabdab_dataset/1u8k/sequence/1u8k_A_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1u8k_A|seqres|full
2
+ ALQLTQSPSSLSASVGDRITITCRASQGVTSALAWYRQKPGSPPQLLIYDASSLESGVPSRFSGSGSGTEFTLTISTLRPEDFATYYCQQLHFYPHTFGGGTRVDVRRTVAAPSVFIFPPSDRQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYECEVTHQGLSSPVTKSFNRGEC
3
+ >1u8k_A|seqres|region: L
4
+ ALQLTQSPSSLSASVGDRITITCRASQGVTSALAWYRQKPGSPPQLLIYDASSLESGVPSRFSGSGSGTEFTLTISTLRPEDFATYYCQQLHFYPHTFGGGTRVDVRRTV--------------------------------------------------------------------------------------------------------
5
+ >1u8k_A|structure|full
6
+ ALQLTQSPSSLSASVGDRITITCRASQGVTSALAWYRQKPGSPPQLLIYDASSLESGVPSRFSGSGSGTEFTLTISTLRPEDFATYYCQQLHFYPHTFGGGTRVDVRRTVAAPSVFIFPPSDRQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYECEVTHQGLSSPVTKSFNRGEC
sabdab_dataset/1u8k/sequence/1u8k_B_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1u8k_B|seqres|full
2
+ RITLKESGPPLVKPTQTLTLTCSFSGFSLSDFGVGVGWIRQPPGKALEWLAIIYSDDDKRYSPSLNTRLTITKDTSKNQVVLVMTRVSPVDTATYFCAHRRGPTTLFGVPIARGPVNAMDVWGQGITVTISSTSTKGPSVFPLAPCSKSTAGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVNHKPSNTKVDKRVEPKS
3
+ >1u8k_B|seqres|region: H
4
+ RITLKESGPPLVKPTQTLTLTCSFSGFSLSDFGVGVGWIRQPPGKALEWLAIIYSDDDKRYSPSLNTRLTITKDTSKNQVVLVMTRVSPVDTATYFCAHRRGPTTLFGVPIARGPVNAMDVWGQGITVTISS------------------------------------------------------------------------------------------------------
5
+ >1u8k_B|structure|full
6
+ RITLKESGPPLVKPTQTLTLTCSFSGFSLSDFGVGVGWIRQPPGKALEWLAIIYSDDDKRYSPSLNTRLTITKDTSKNQVVLVMTRVSPVDTATYFCAHRRGPTTLFGVPIARGPVNAMDVWGQGITVTISSTSTKGPSVFPLAPCS------TAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVNHKPSNTKVDKRVEPKS
sabdab_dataset/1u8k/sequence/1u8k_raw.pdb ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1u8k_A|type: L
2
+ ALQLTQSPSSLSASVGDRITITCRASQGVTSALAWYRQKPGSPPQLLIYDASSLESGVPSRFSGSGSGTEFTLTISTLRPEDFATYYCQQLHFYPHTFGGGTRVDVRRTVAAPSVFIFPPSDRQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYECEVTHQGLSSPVTKSFNRGEC
3
+ >1u8k_C|type: non-ab
4
+ LELDKWASL
5
+ >1u8k_B|type: H
6
+ RITLKESGPPLVKPTQTLTLTCSFSGFSLSDFGVGVGWIRQPPGKALEWLAIIYSDDDKRYSPSLNTRLTITKDTSKNQVVLVMTRVSPVDTATYFCAHRRGPTTLFGVPIARGPVNAMDVWGQGITVTISSTSTKGPSVFPLAPCSKSTAGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVNHKPSNTKVDKRVEPKS
sabdab_dataset/1u8k/structure/1u8k.pdb ADDED
The diff for this file is too large to render. See raw diff