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  1. sabdab_dataset/1cfv/abangle/1cfv.abangle +2 -0
  2. sabdab_dataset/1cfv/annotation/1cfv_H_VH.ann +119 -0
  3. sabdab_dataset/1cfv/annotation/1cfv_L_VL.ann +113 -0
  4. sabdab_dataset/1cfv/imgt/1cfv_H_H.ann +3 -0
  5. sabdab_dataset/1cfv/imgt/1cfv_L_L.ann +3 -0
  6. sabdab_dataset/1cfv/sequence/1cfv_H_VH.fa +6 -0
  7. sabdab_dataset/1cfv/sequence/1cfv_L_VL.fa +6 -0
  8. sabdab_dataset/1cfv/sequence/1cfv_raw.pdb +4 -0
  9. sabdab_dataset/1cfv/structure/1cfv.pdb +0 -0
  10. sabdab_dataset/1cfv/structure/chothia/1cfv.pdb +0 -0
  11. sabdab_dataset/1um5/abangle/1um5.abangle +2 -0
  12. sabdab_dataset/1um5/annotation/1um5_H_VH.ann +117 -0
  13. sabdab_dataset/1um5/annotation/1um5_L_VL.ann +110 -0
  14. sabdab_dataset/1um5/imgt/1um5_H_H.ann +4 -0
  15. sabdab_dataset/1um5/imgt/1um5_L_L.ann +4 -0
  16. sabdab_dataset/1um5/sequence/1um5_H_VH.fa +6 -0
  17. sabdab_dataset/1um5/sequence/1um5_L_VL.fa +6 -0
  18. sabdab_dataset/1um5/sequence/1um5_raw.pdb +4 -0
  19. sabdab_dataset/1um5/structure/1um5.pdb +0 -0
  20. sabdab_dataset/1um5/structure/chothia/1um5.pdb +0 -0
  21. sabdab_dataset/1xiw/abangle/1xiw.abangle +3 -0
  22. sabdab_dataset/1xiw/annotation/1xiw_C_VL.ann +107 -0
  23. sabdab_dataset/1xiw/annotation/1xiw_D_VH.ann +122 -0
  24. sabdab_dataset/1xiw/annotation/1xiw_G_VL.ann +107 -0
  25. sabdab_dataset/1xiw/annotation/1xiw_H_VH.ann +122 -0
  26. sabdab_dataset/1xiw/imgt/1xiw_C_L.ann +3 -0
  27. sabdab_dataset/1xiw/imgt/1xiw_D_H.ann +3 -0
  28. sabdab_dataset/1xiw/imgt/1xiw_G_L.ann +3 -0
  29. sabdab_dataset/1xiw/imgt/1xiw_H_H.ann +3 -0
  30. sabdab_dataset/1xiw/sequence/1xiw_C_VL.fa +6 -0
  31. sabdab_dataset/1xiw/sequence/1xiw_D_VH.fa +6 -0
  32. sabdab_dataset/1xiw/sequence/1xiw_G_VL.fa +6 -0
  33. sabdab_dataset/1xiw/sequence/1xiw_H_VH.fa +6 -0
  34. sabdab_dataset/1xiw/sequence/1xiw_raw.pdb +16 -0
  35. sabdab_dataset/1xiw/structure/1xiw.pdb +0 -0
  36. sabdab_dataset/1xiw/structure/chothia/1xiw.pdb +0 -0
  37. sabdab_dataset/2bdn/abangle/2bdn.abangle +2 -0
  38. sabdab_dataset/2bdn/annotation/2bdn_H_VH.ann +117 -0
  39. sabdab_dataset/2bdn/annotation/2bdn_L_VL.ann +109 -0
  40. sabdab_dataset/2bdn/imgt/2bdn_H_H.ann +4 -0
  41. sabdab_dataset/2bdn/imgt/2bdn_L_L.ann +4 -0
  42. sabdab_dataset/2bdn/sequence/2bdn_H_VH.fa +6 -0
  43. sabdab_dataset/2bdn/sequence/2bdn_L_VL.fa +6 -0
  44. sabdab_dataset/2bdn/sequence/2bdn_raw.pdb +6 -0
  45. sabdab_dataset/2bdn/structure/2bdn.pdb +0 -0
  46. sabdab_dataset/2bdn/structure/chothia/2bdn.pdb +0 -0
  47. sabdab_dataset/2ez0/abangle/2ez0.abangle +3 -0
  48. sabdab_dataset/2ez0/annotation/2ez0_C_VH.ann +121 -0
  49. sabdab_dataset/2ez0/annotation/2ez0_D_VL.ann +109 -0
  50. sabdab_dataset/2ez0/annotation/2ez0_E_VH.ann +121 -0
sabdab_dataset/1cfv/abangle/1cfv.abangle ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1cfv H L 0 -66.58 71.21 115.32 122.02 80.65 16.22
sabdab_dataset/1cfv/annotation/1cfv_H_VH.ann ADDED
@@ -0,0 +1,119 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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sabdab_dataset/1cfv/annotation/1cfv_L_VL.ann ADDED
@@ -0,0 +1,113 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ L1 D
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+ L2 I
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+ L4 L
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+ L5 T
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+ L6 Q
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+ L7 S
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+ L8 P
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sabdab_dataset/1cfv/imgt/1cfv_H_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGHJ4*01 IG IGHJ IGHJ4 IGHJ4 NA True
3
+ V Mus_musculus IGHV5-6-2*01 IG IGHV IGHV5 IGHV5-6-2 NA True
sabdab_dataset/1cfv/imgt/1cfv_L_L.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGKJ4*01 IG IGKJ IGKJ4 IGKJ4 NA True
3
+ V Mus_musculus IGKV1-110*01 IG IGKV IGKV1 IGKV1-110 NA True
sabdab_dataset/1cfv/sequence/1cfv_H_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1cfv_H|seqres|full
2
+ QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYYPDTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLNYAVYGMDYWGQGTTVTVSS
3
+ >1cfv_H|seqres|region: H
4
+ QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYYPDTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLNYAVYGMDYWGQGTTVTVSS
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+ >1cfv_H|structure|full
6
+ QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYYPDTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLNYAVYGMDYWGQGTTVTVSS
sabdab_dataset/1cfv/sequence/1cfv_L_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1cfv_L|seqres|full
2
+ DIELTQSPPSLPVSLGDQVSISCRSSQSLVSNNRRNYLHWYLQKPGQSPKLVIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVAAEDLGLYFCSQSSHVPLTFGSGTKLEIKR
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+ >1cfv_L|seqres|region: L
4
+ DIELTQSPPSLPVSLGDQVSISCRSSQSLVSNNRRNYLHWYLQKPGQSPKLVIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVAAEDLGLYFCSQSSHVPLTFGSGTKLEIKR
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+ >1cfv_L|structure|full
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+ DIELTQSPPSLPVSLGDQVSISCRSSQSLVSNNRRNYLHWYLQKPGQSPKLVIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVAAEDLGLYFCSQSSHVPLTFGSGTKLEIKR
sabdab_dataset/1cfv/sequence/1cfv_raw.pdb ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ >1cfv_H|type: H
2
+ QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYYPDTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLNYAVYGMDYWGQGTTVTVSS
3
+ >1cfv_L|type: L
4
+ DIELTQSPPSLPVSLGDQVSISCRSSQSLVSNNRRNYLHWYLQKPGQSPKLVIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVAAEDLGLYFCSQSSHVPLTFGSGTKLEIKR
sabdab_dataset/1cfv/structure/1cfv.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1cfv/structure/chothia/1cfv.pdb ADDED
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sabdab_dataset/1um5/abangle/1um5.abangle ADDED
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1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1um5 H L 0 -55.64 68.82 113.51 122.23 82.88 16.18
sabdab_dataset/1um5/annotation/1um5_H_VH.ann ADDED
@@ -0,0 +1,117 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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sabdab_dataset/1um5/annotation/1um5_L_VL.ann ADDED
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sabdab_dataset/1um5/imgt/1um5_H_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGHG1*02 IG IGHC IGHG1 IGHG1 IGg True
3
+ J Mus_musculus IGHJ3*01 IG IGHJ IGHJ3 IGHJ3 NA True
4
+ V Mus_musculus IGHV1-14*01 IG IGHV IGHV1 IGHV1-14 NA True
sabdab_dataset/1um5/imgt/1um5_L_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGKC*03 IG IGKC IGKC IGKC NA True
3
+ J Mus_musculus IGKJ1*01 IG IGKJ IGKJ1 IGKJ1 NA True
4
+ V Mus_musculus IGKV9-124*01 IG IGKV IGKV9 IGKV9-124 NA True
sabdab_dataset/1um5/sequence/1um5_H_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1um5_H|seqres|full
2
+ VQLQQSGPVLVKPGGSVKMSCKASEYTLTSYLFQWVKQKSGQGLEWIGYIYPYNGGTRYNEKFRGKATLTSDKSSNTAYLELSSLTSEDSAVYYCARSSMSDPGANWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
3
+ >1um5_H|seqres|region: H
4
+ VQLQQSGPVLVKPGGSVKMSCKASEYTLTSYLFQWVKQKSGQGLEWIGYIYPYNGGTRYNEKFRGKATLTSDKSSNTAYLELSSLTSEDSAVYYCARSSMSDPGANWGPGTLVTVSS----------------------------------------------------------------------------------------------------
5
+ >1um5_H|structure|full
6
+ VQLQQSGPVLVKPGGSVKMSCKASEYTLTSYLFQWVKQKSGQGLEWIGYIYPYNGGTRYNEKFRGKATLTSDKSSNTAYLELSSLTSEDSAVYYCARSSMSDPGANWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
sabdab_dataset/1um5/sequence/1um5_L_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1um5_L|seqres|full
2
+ LDIQMTQSPSSLSASLGERVSLTCRASQEISGYLYWLQQKPDGTIKRLIYAGSTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECGAGA
3
+ >1um5_L|seqres|region: L
4
+ -DIQMTQSPSSLSASLGERVSLTCRASQEISGYLYWLQQKPDGTIKRLIYAGSTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPRTFGGGTKVEIKRTV------------------------------------------------------------------------------------------------------------
5
+ >1um5_L|structure|full
6
+ LDIQMTQSPSSLSASLGERVSLTCRASQEISGYLYWLQQKPDGTIKRLIYAGSTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECG---
sabdab_dataset/1um5/sequence/1um5_raw.pdb ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ >1um5_H|type: H
2
+ VQLQQSGPVLVKPGGSVKMSCKASEYTLTSYLFQWVKQKSGQGLEWIGYIYPYNGGTRYNEKFRGKATLTSDKSSNTAYLELSSLTSEDSAVYYCARSSMSDPGANWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
3
+ >1um5_L|type: L
4
+ LDIQMTQSPSSLSASLGERVSLTCRASQEISGYLYWLQQKPDGTIKRLIYAGSTLDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECGAGA
sabdab_dataset/1um5/structure/1um5.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1um5/structure/chothia/1um5.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1xiw/abangle/1xiw.abangle ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1xiw H G 0 -68.72 71.71 111.47 118.66 77.77 15.53
3
+ 1xiw D C 0 -66.03 71.69 111.91 119.41 79.45 15.75
sabdab_dataset/1xiw/annotation/1xiw_C_VL.ann ADDED
@@ -0,0 +1,107 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 Q
4
+ L4 M
5
+ L5 T
6
+ L6 Q
7
+ L7 T
8
+ L8 T
9
+ L9 S
10
+ L10 S
11
+ L11 L
12
+ L12 S
13
+ L13 A
14
+ L14 S
15
+ L15 L
16
+ L16 G
17
+ L17 D
18
+ L18 R
19
+ L19 V
20
+ L20 T
21
+ L21 I
22
+ L22 S
23
+ L23 C
24
+ L24 R
25
+ L25 A
26
+ L26 S
27
+ L27 Q
28
+ L28 D
29
+ L29 I
30
+ L30 R
31
+ L31 N
32
+ L32 Y
33
+ L33 L
34
+ L34 N
35
+ L35 W
36
+ L36 Y
37
+ L37 Q
38
+ L38 Q
39
+ L39 K
40
+ L40 P
41
+ L41 D
42
+ L42 G
43
+ L43 T
44
+ L44 V
45
+ L45 K
46
+ L46 L
47
+ L47 L
48
+ L48 I
49
+ L49 Y
50
+ L50 Y
51
+ L51 T
52
+ L52 S
53
+ L53 R
54
+ L54 L
55
+ L55 H
56
+ L56 S
57
+ L57 G
58
+ L58 V
59
+ L59 P
60
+ L60 S
61
+ L61 K
62
+ L62 F
63
+ L63 S
64
+ L64 G
65
+ L65 S
66
+ L66 G
67
+ L67 S
68
+ L68 G
69
+ L69 T
70
+ L70 D
71
+ L71 Y
72
+ L72 S
73
+ L73 L
74
+ L74 T
75
+ L75 I
76
+ L76 S
77
+ L77 N
78
+ L78 L
79
+ L79 E
80
+ L80 Q
81
+ L81 E
82
+ L82 D
83
+ L83 I
84
+ L84 A
85
+ L85 T
86
+ L86 Y
87
+ L87 F
88
+ L88 C
89
+ L89 Q
90
+ L90 Q
91
+ L91 G
92
+ L92 N
93
+ L93 T
94
+ L94 L
95
+ L95 P
96
+ L96 W
97
+ L97 T
98
+ L98 F
99
+ L99 A
100
+ L100 G
101
+ L101 G
102
+ L102 T
103
+ L103 K
104
+ L104 L
105
+ L105 E
106
+ L106 I
107
+ L107 K
sabdab_dataset/1xiw/annotation/1xiw_D_VH.ann ADDED
@@ -0,0 +1,122 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 E
2
+ H2 V
3
+ H3 Q
4
+ H4 L
5
+ H5 Q
6
+ H6 Q
7
+ H7 S
8
+ H8 G
9
+ H9 P
10
+ H10 E
11
+ H11 L
12
+ H12 V
13
+ H13 K
14
+ H14 P
15
+ H15 G
16
+ H16 A
17
+ H17 S
18
+ H18 M
19
+ H19 K
20
+ H20 I
21
+ H21 S
22
+ H22 C
23
+ H23 K
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 Y
28
+ H28 S
29
+ H29 F
30
+ H30 T
31
+ H31 G
32
+ H32 Y
33
+ H33 T
34
+ H34 M
35
+ H35 N
36
+ H36 W
37
+ H37 V
38
+ H38 K
39
+ H39 Q
40
+ H40 S
41
+ H41 H
42
+ H42 G
43
+ H43 K
44
+ H44 N
45
+ H45 L
46
+ H46 E
47
+ H47 W
48
+ H48 M
49
+ H49 G
50
+ H50 L
51
+ H51 I
52
+ H52 N
53
+ H52A P
54
+ H53 Y
55
+ H54 K
56
+ H55 G
57
+ H56 V
58
+ H57 S
59
+ H58 T
60
+ H59 Y
61
+ H60 N
62
+ H61 Q
63
+ H62 K
64
+ H63 F
65
+ H64 K
66
+ H65 D
67
+ H66 K
68
+ H67 A
69
+ H68 T
70
+ H69 L
71
+ H70 T
72
+ H71 V
73
+ H72 D
74
+ H73 K
75
+ H74 S
76
+ H75 S
77
+ H76 S
78
+ H77 T
79
+ H78 A
80
+ H79 Y
81
+ H80 M
82
+ H81 E
83
+ H82 L
84
+ H82A L
85
+ H82B S
86
+ H82C L
87
+ H83 T
88
+ H84 S
89
+ H85 E
90
+ H86 D
91
+ H87 S
92
+ H88 A
93
+ H89 V
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 A
98
+ H94 R
99
+ H95 S
100
+ H96 G
101
+ H97 Y
102
+ H98 Y
103
+ H99 G
104
+ H100 D
105
+ H100A S
106
+ H100B D
107
+ H100C W
108
+ H100D Y
109
+ H100E F
110
+ H101 D
111
+ H102 V
112
+ H103 W
113
+ H104 G
114
+ H105 Q
115
+ H106 G
116
+ H107 T
117
+ H108 T
118
+ H109 L
119
+ H110 T
120
+ H111 V
121
+ H112 F
122
+ H113 S
sabdab_dataset/1xiw/annotation/1xiw_G_VL.ann ADDED
@@ -0,0 +1,107 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 Q
4
+ L4 M
5
+ L5 T
6
+ L6 Q
7
+ L7 T
8
+ L8 T
9
+ L9 S
10
+ L10 S
11
+ L11 L
12
+ L12 S
13
+ L13 A
14
+ L14 S
15
+ L15 L
16
+ L16 G
17
+ L17 D
18
+ L18 R
19
+ L19 V
20
+ L20 T
21
+ L21 I
22
+ L22 S
23
+ L23 C
24
+ L24 R
25
+ L25 A
26
+ L26 S
27
+ L27 Q
28
+ L28 D
29
+ L29 I
30
+ L30 R
31
+ L31 N
32
+ L32 Y
33
+ L33 L
34
+ L34 N
35
+ L35 W
36
+ L36 Y
37
+ L37 Q
38
+ L38 Q
39
+ L39 K
40
+ L40 P
41
+ L41 D
42
+ L42 G
43
+ L43 T
44
+ L44 V
45
+ L45 K
46
+ L46 L
47
+ L47 L
48
+ L48 I
49
+ L49 Y
50
+ L50 Y
51
+ L51 T
52
+ L52 S
53
+ L53 R
54
+ L54 L
55
+ L55 H
56
+ L56 S
57
+ L57 G
58
+ L58 V
59
+ L59 P
60
+ L60 S
61
+ L61 K
62
+ L62 F
63
+ L63 S
64
+ L64 G
65
+ L65 S
66
+ L66 G
67
+ L67 S
68
+ L68 G
69
+ L69 T
70
+ L70 D
71
+ L71 Y
72
+ L72 S
73
+ L73 L
74
+ L74 T
75
+ L75 I
76
+ L76 S
77
+ L77 N
78
+ L78 L
79
+ L79 E
80
+ L80 Q
81
+ L81 E
82
+ L82 D
83
+ L83 I
84
+ L84 A
85
+ L85 T
86
+ L86 Y
87
+ L87 F
88
+ L88 C
89
+ L89 Q
90
+ L90 Q
91
+ L91 G
92
+ L92 N
93
+ L93 T
94
+ L94 L
95
+ L95 P
96
+ L96 W
97
+ L97 T
98
+ L98 F
99
+ L99 A
100
+ L100 G
101
+ L101 G
102
+ L102 T
103
+ L103 K
104
+ L104 L
105
+ L105 E
106
+ L106 I
107
+ L107 K
sabdab_dataset/1xiw/annotation/1xiw_H_VH.ann ADDED
@@ -0,0 +1,122 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 E
2
+ H2 V
3
+ H3 Q
4
+ H4 L
5
+ H5 Q
6
+ H6 Q
7
+ H7 S
8
+ H8 G
9
+ H9 P
10
+ H10 E
11
+ H11 L
12
+ H12 V
13
+ H13 K
14
+ H14 P
15
+ H15 G
16
+ H16 A
17
+ H17 S
18
+ H18 M
19
+ H19 K
20
+ H20 I
21
+ H21 S
22
+ H22 C
23
+ H23 K
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 Y
28
+ H28 S
29
+ H29 F
30
+ H30 T
31
+ H31 G
32
+ H32 Y
33
+ H33 T
34
+ H34 M
35
+ H35 N
36
+ H36 W
37
+ H37 V
38
+ H38 K
39
+ H39 Q
40
+ H40 S
41
+ H41 H
42
+ H42 G
43
+ H43 K
44
+ H44 N
45
+ H45 L
46
+ H46 E
47
+ H47 W
48
+ H48 M
49
+ H49 G
50
+ H50 L
51
+ H51 I
52
+ H52 N
53
+ H52A P
54
+ H53 Y
55
+ H54 K
56
+ H55 G
57
+ H56 V
58
+ H57 S
59
+ H58 T
60
+ H59 Y
61
+ H60 N
62
+ H61 Q
63
+ H62 K
64
+ H63 F
65
+ H64 K
66
+ H65 D
67
+ H66 K
68
+ H67 A
69
+ H68 T
70
+ H69 L
71
+ H70 T
72
+ H71 V
73
+ H72 D
74
+ H73 K
75
+ H74 S
76
+ H75 S
77
+ H76 S
78
+ H77 T
79
+ H78 A
80
+ H79 Y
81
+ H80 M
82
+ H81 E
83
+ H82 L
84
+ H82A L
85
+ H82B S
86
+ H82C L
87
+ H83 T
88
+ H84 S
89
+ H85 E
90
+ H86 D
91
+ H87 S
92
+ H88 A
93
+ H89 V
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 A
98
+ H94 R
99
+ H95 S
100
+ H96 G
101
+ H97 Y
102
+ H98 Y
103
+ H99 G
104
+ H100 D
105
+ H100A S
106
+ H100B D
107
+ H100C W
108
+ H100D Y
109
+ H100E F
110
+ H101 D
111
+ H102 V
112
+ H103 W
113
+ H104 G
114
+ H105 Q
115
+ H106 G
116
+ H107 T
117
+ H108 T
118
+ H109 L
119
+ H110 T
120
+ H111 V
121
+ H112 F
122
+ H113 S
sabdab_dataset/1xiw/imgt/1xiw_C_L.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGKJ1*01 IG IGKJ IGKJ1 IGKJ1 NA True
3
+ V Mus_musculus IGKV10-96*01 IG IGKV IGKV10 IGKV10-96 NA True
sabdab_dataset/1xiw/imgt/1xiw_D_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGHJ1*01 IG IGHJ IGHJ1 IGHJ1 NA True
3
+ V Mus_musculus IGHV1-37*01 IG IGHV IGHV1 IGHV1-37 NA True
sabdab_dataset/1xiw/imgt/1xiw_G_L.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGKJ1*01 IG IGKJ IGKJ1 IGKJ1 NA True
3
+ V Mus_musculus IGKV10-96*01 IG IGKV IGKV10 IGKV10-96 NA True
sabdab_dataset/1xiw/imgt/1xiw_H_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGHJ1*01 IG IGHJ IGHJ1 IGHJ1 NA True
3
+ V Mus_musculus IGHV1-37*01 IG IGHV IGHV1 IGHV1-37 NA True
sabdab_dataset/1xiw/sequence/1xiw_C_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1xiw_C|seqres|full
2
+ MDIQMTQTTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSKFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFAGGTKLEIK
3
+ >1xiw_C|seqres|region: L
4
+ -DIQMTQTTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSKFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFAGGTKLEIK
5
+ >1xiw_C|structure|full
6
+ MDIQMTQTTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSKFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFAGGTKLEI-
sabdab_dataset/1xiw/sequence/1xiw_D_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1xiw_D|seqres|full
2
+ EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWMGLINPYKGVSTYNQKFKDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSGYYGDSDWYFDVWGQGTTLTVFS
3
+ >1xiw_D|seqres|region: H
4
+ EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWMGLINPYKGVSTYNQKFKDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSGYYGDSDWYFDVWGQGTTLTVFS
5
+ >1xiw_D|structure|full
6
+ EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWMGLINPYKGVSTYNQKFKDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSGYYGDSDWYFDVWGQGTTLTVFS
sabdab_dataset/1xiw/sequence/1xiw_G_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1xiw_G|seqres|full
2
+ MDIQMTQTTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSKFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFAGGTKLEIK
3
+ >1xiw_G|seqres|region: L
4
+ -DIQMTQTTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSKFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFAGGTKLEIK
5
+ >1xiw_G|structure|full
6
+ MDIQMTQTTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSKFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFAGGTKLEI-
sabdab_dataset/1xiw/sequence/1xiw_H_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1xiw_H|seqres|full
2
+ EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWMGLINPYKGVSTYNQKFKDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSGYYGDSDWYFDVWGQGTTLTVFS
3
+ >1xiw_H|seqres|region: H
4
+ EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWMGLINPYKGVSTYNQKFKDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSGYYGDSDWYFDVWGQGTTLTVFS
5
+ >1xiw_H|structure|full
6
+ EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWMGLINPYKGVSTYNQKFKDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSGYYGDSDWYFDVWGQGTTLTVFS
sabdab_dataset/1xiw/sequence/1xiw_raw.pdb ADDED
@@ -0,0 +1,16 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ >1xiw_A|type: non-ab
2
+ MDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRARVCENCMEMD
3
+ >1xiw_C|type: L
4
+ MDIQMTQTTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSKFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFAGGTKLEIK
5
+ >1xiw_B|type: non-ab
6
+ MKIPIEELEDRVFVNCNTSITWVEGTVGTLLSDITRLDLGKRILDPRGIYRCNGTDIYKDKESTVQVHYRMCQSCVELD
7
+ >1xiw_E|type: non-ab
8
+ MDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRARVCENCMEMD
9
+ >1xiw_D|type: H
10
+ EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWMGLINPYKGVSTYNQKFKDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSGYYGDSDWYFDVWGQGTTLTVFS
11
+ >1xiw_G|type: L
12
+ MDIQMTQTTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSKFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFAGGTKLEIK
13
+ >1xiw_F|type: non-ab
14
+ MKIPIEELEDRVFVNCNTSITWVEGTVGTLLSDITRLDLGKRILDPRGIYRCNGTDIYKDKESTVQVHYRMCQSCVELD
15
+ >1xiw_H|type: H
16
+ EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWMGLINPYKGVSTYNQKFKDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSGYYGDSDWYFDVWGQGTTLTVFS
sabdab_dataset/1xiw/structure/1xiw.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1xiw/structure/chothia/1xiw.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/2bdn/abangle/2bdn.abangle ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 2bdn H L 0 -58.68 71.73 114.50 120.59 83.79 16.30
sabdab_dataset/2bdn/annotation/2bdn_H_VH.ann ADDED
@@ -0,0 +1,117 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 E
2
+ H2 V
3
+ H3 Q
4
+ H4 L
5
+ H5 Q
6
+ H6 Q
7
+ H7 S
8
+ H8 G
9
+ H9 A
10
+ H10 E
11
+ H11 L
12
+ H12 V
13
+ H13 K
14
+ H14 A
15
+ H15 G
16
+ H16 A
17
+ H17 S
18
+ H18 V
19
+ H19 K
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 P
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 L
28
+ H28 N
29
+ H29 I
30
+ H30 K
31
+ H31 D
32
+ H32 T
33
+ H33 Y
34
+ H34 M
35
+ H35 H
36
+ H36 W
37
+ H37 V
38
+ H38 K
39
+ H39 Q
40
+ H40 R
41
+ H41 P
42
+ H42 E
43
+ H43 Q
44
+ H44 G
45
+ H45 L
46
+ H46 E
47
+ H47 W
48
+ H48 I
49
+ H49 G
50
+ H50 R
51
+ H51 I
52
+ H52 D
53
+ H52A P
54
+ H53 A
55
+ H54 N
56
+ H55 G
57
+ H56 N
58
+ H57 T
59
+ H58 K
60
+ H59 F
61
+ H60 D
62
+ H61 P
63
+ H62 K
64
+ H63 F
65
+ H64 Q
66
+ H65 G
67
+ H66 K
68
+ H67 A
69
+ H68 T
70
+ H69 I
71
+ H70 T
72
+ H71 A
73
+ H72 D
74
+ H73 T
75
+ H74 S
76
+ H75 S
77
+ H76 N
78
+ H77 T
79
+ H78 A
80
+ H79 Y
81
+ H80 L
82
+ H81 Q
83
+ H82 L
84
+ H82A S
85
+ H82B S
86
+ H82C L
87
+ H83 T
88
+ H84 S
89
+ H85 E
90
+ H86 D
91
+ H87 T
92
+ H88 A
93
+ H89 V
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 A
98
+ H94 R
99
+ H95 G
100
+ H96 V
101
+ H97 F
102
+ H98 G
103
+ H99 F
104
+ H100 F
105
+ H101 D
106
+ H102 Y
107
+ H103 W
108
+ H104 G
109
+ H105 Q
110
+ H106 G
111
+ H107 T
112
+ H108 T
113
+ H109 L
114
+ H110 T
115
+ H111 V
116
+ H112 S
117
+ H113 S
sabdab_dataset/2bdn/annotation/2bdn_L_VL.ann ADDED
@@ -0,0 +1,109 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 Q
4
+ L4 M
5
+ L5 T
6
+ L6 Q
7
+ L7 S
8
+ L8 S
9
+ L9 S
10
+ L10 S
11
+ L11 F
12
+ L12 S
13
+ L13 V
14
+ L14 S
15
+ L15 L
16
+ L16 G
17
+ L17 D
18
+ L18 R
19
+ L19 V
20
+ L20 T
21
+ L21 I
22
+ L22 T
23
+ L23 C
24
+ L24 K
25
+ L25 A
26
+ L26 T
27
+ L27 E
28
+ L28 D
29
+ L29 I
30
+ L30 Y
31
+ L31 N
32
+ L32 R
33
+ L33 L
34
+ L34 A
35
+ L35 W
36
+ L36 Y
37
+ L37 Q
38
+ L38 Q
39
+ L39 K
40
+ L40 P
41
+ L41 G
42
+ L42 S
43
+ L43 A
44
+ L44 P
45
+ L45 R
46
+ L46 L
47
+ L47 L
48
+ L48 I
49
+ L49 S
50
+ L50 G
51
+ L51 A
52
+ L52 T
53
+ L53 S
54
+ L54 L
55
+ L55 E
56
+ L56 T
57
+ L57 G
58
+ L58 V
59
+ L59 P
60
+ L60 S
61
+ L61 R
62
+ L62 F
63
+ L63 S
64
+ L64 G
65
+ L65 S
66
+ L66 G
67
+ L67 S
68
+ L68 G
69
+ L69 K
70
+ L70 D
71
+ L71 Y
72
+ L72 T
73
+ L73 L
74
+ L74 S
75
+ L75 I
76
+ L76 T
77
+ L77 S
78
+ L78 L
79
+ L79 Q
80
+ L80 T
81
+ L81 E
82
+ L82 D
83
+ L83 V
84
+ L84 A
85
+ L85 T
86
+ L86 Y
87
+ L87 Y
88
+ L88 C
89
+ L89 Q
90
+ L90 Q
91
+ L91 F
92
+ L92 W
93
+ L93 S
94
+ L94 A
95
+ L95 P
96
+ L96 Y
97
+ L97 T
98
+ L98 F
99
+ L99 G
100
+ L100 G
101
+ L101 G
102
+ L102 T
103
+ L103 K
104
+ L104 L
105
+ L105 E
106
+ L106 I
107
+ L107 K
108
+ L108 R
109
+ L109 A
sabdab_dataset/2bdn/imgt/2bdn_H_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGHG2A*01 IG IGHC IGHG2A IGHG2A IGg True
3
+ J Mus_musculus IGHJ2*01 IG IGHJ IGHJ2 IGHJ2 NA True
4
+ V Mus_musculus IGHV14-3*02 IG IGHV IGHV14 IGHV14-3 NA True
sabdab_dataset/2bdn/imgt/2bdn_L_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGKC*01 IG IGKC IGKC IGKC NA True
3
+ J Mus_musculus IGKJ2*01 IG IGKJ IGKJ2 IGKJ2 NA True
4
+ V Mus_musculus IGKV13-84*01 IG IGKV IGKV13 IGKV13-84 NA True
sabdab_dataset/2bdn/sequence/2bdn_H_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >2bdn_H|seqres|full
2
+ EVQLQQSGAELVKAGASVKLSCPASGLNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKFDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARGVFGFFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIVPR
3
+ >2bdn_H|seqres|region: H
4
+ EVQLQQSGAELVKAGASVKLSCPASGLNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKFDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARGVFGFFDYWGQGTTLTVSS----------------------------------------------------------------------------------------------------
5
+ >2bdn_H|structure|full
6
+ EVQLQQSGAELVKAGASVKLSCPASGLNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKFDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARGVFGFFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIVPR
sabdab_dataset/2bdn/sequence/2bdn_L_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >2bdn_L|seqres|full
2
+ DIQMTQSSSSFSVSLGDRVTITCKATEDIYNRLAWYQQKPGSAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQFWSAPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
3
+ >2bdn_L|seqres|region: L
4
+ DIQMTQSSSSFSVSLGDRVTITCKATEDIYNRLAWYQQKPGSAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQFWSAPYTFGGGTKLEIKRA---------------------------------------------------------------------------------------------------------
5
+ >2bdn_L|structure|full
6
+ DIQMTQSSSSFSVSLGDRVTITCKATEDIYNRLAWYQQKPGSAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQFWSAPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
sabdab_dataset/2bdn/sequence/2bdn_raw.pdb ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >2bdn_A|type: non-ab
2
+ QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPKT
3
+ >2bdn_H|type: H
4
+ EVQLQQSGAELVKAGASVKLSCPASGLNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKFDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARGVFGFFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIVPR
5
+ >2bdn_L|type: L
6
+ DIQMTQSSSSFSVSLGDRVTITCKATEDIYNRLAWYQQKPGSAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQFWSAPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
sabdab_dataset/2bdn/structure/2bdn.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/2bdn/structure/chothia/2bdn.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/2ez0/abangle/2ez0.abangle ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 2ez0 C D 0 -61.91 74.29 116.56 117.32 81.48 16.28
3
+ 2ez0 E F 0 -62.21 74.20 116.43 116.75 81.06 16.35
sabdab_dataset/2ez0/annotation/2ez0_C_VH.ann ADDED
@@ -0,0 +1,121 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 E
2
+ H2 V
3
+ H3 R
4
+ H4 L
5
+ H5 L
6
+ H6 E
7
+ H7 S
8
+ H8 G
9
+ H9 G
10
+ H10 G
11
+ H11 L
12
+ H12 V
13
+ H13 Q
14
+ H14 P
15
+ H15 G
16
+ H16 G
17
+ H17 S
18
+ H18 L
19
+ H19 K
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 A
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 F
28
+ H28 D
29
+ H29 Y
30
+ H30 S
31
+ H31 R
32
+ H32 Y
33
+ H33 W
34
+ H34 M
35
+ H35 S
36
+ H36 W
37
+ H37 V
38
+ H38 R
39
+ H39 Q
40
+ H40 A
41
+ H41 P
42
+ H42 G
43
+ H43 K
44
+ H44 G
45
+ H45 L
46
+ H46 K
47
+ H47 W
48
+ H48 I
49
+ H49 G
50
+ H50 E
51
+ H51 I
52
+ H52 N
53
+ H52A P
54
+ H53 V
55
+ H54 S
56
+ H55 S
57
+ H56 T
58
+ H57 I
59
+ H58 N
60
+ H59 Y
61
+ H60 T
62
+ H61 P
63
+ H62 S
64
+ H63 L
65
+ H64 K
66
+ H65 D
67
+ H66 K
68
+ H67 F
69
+ H68 I
70
+ H69 I
71
+ H70 S
72
+ H71 R
73
+ H72 D
74
+ H73 N
75
+ H74 A
76
+ H75 K
77
+ H76 D
78
+ H77 T
79
+ H78 L
80
+ H79 Y
81
+ H80 L
82
+ H81 Q
83
+ H82 I
84
+ H82A S
85
+ H82B K
86
+ H82C V
87
+ H83 R
88
+ H84 S
89
+ H85 E
90
+ H86 D
91
+ H87 T
92
+ H88 A
93
+ H89 L
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 A
98
+ H94 R
99
+ H95 L
100
+ H96 Y
101
+ H97 Y
102
+ H98 G
103
+ H99 Y
104
+ H100 G
105
+ H100A Y
106
+ H100B W
107
+ H100C Y
108
+ H100D F
109
+ H101 D
110
+ H102 V
111
+ H103 W
112
+ H104 G
113
+ H105 A
114
+ H106 G
115
+ H107 T
116
+ H108 T
117
+ H109 V
118
+ H110 T
119
+ H111 V
120
+ H112 S
121
+ H113 S
sabdab_dataset/2ez0/annotation/2ez0_D_VL.ann ADDED
@@ -0,0 +1,109 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 V
4
+ L4 L
5
+ L5 T
6
+ L6 Q
7
+ L7 S
8
+ L8 P
9
+ L9 A
10
+ L10 I
11
+ L11 M
12
+ L12 S
13
+ L13 A
14
+ L14 A
15
+ L15 P
16
+ L16 G
17
+ L17 D
18
+ L18 K
19
+ L19 V
20
+ L20 T
21
+ L21 M
22
+ L22 T
23
+ L23 C
24
+ L24 S
25
+ L25 A
26
+ L26 S
27
+ L27 S
28
+ L28 S
29
+ L29 V
30
+ L30 S
31
+ L32 Y
32
+ L33 I
33
+ L34 H
34
+ L35 W
35
+ L36 Y
36
+ L37 Q
37
+ L38 Q
38
+ L39 K
39
+ L40 S
40
+ L41 G
41
+ L42 T
42
+ L43 S
43
+ L44 P
44
+ L45 K
45
+ L46 R
46
+ L47 W
47
+ L48 I
48
+ L49 Y
49
+ L50 D
50
+ L51 T
51
+ L52 S
52
+ L53 K
53
+ L54 L
54
+ L55 T
55
+ L56 S
56
+ L57 G
57
+ L58 V
58
+ L59 P
59
+ L60 V
60
+ L61 R
61
+ L62 F
62
+ L63 S
63
+ L64 G
64
+ L65 S
65
+ L66 G
66
+ L67 S
67
+ L68 G
68
+ L69 T
69
+ L70 S
70
+ L71 Y
71
+ L72 S
72
+ L73 L
73
+ L74 T
74
+ L75 I
75
+ L76 N
76
+ L77 T
77
+ L78 M
78
+ L79 E
79
+ L80 A
80
+ L81 E
81
+ L82 D
82
+ L83 A
83
+ L84 A
84
+ L85 T
85
+ L86 Y
86
+ L87 Y
87
+ L88 C
88
+ L89 Q
89
+ L90 Q
90
+ L91 W
91
+ L92 S
92
+ L93 S
93
+ L94 H
94
+ L95 P
95
+ L96 Q
96
+ L97 T
97
+ L98 F
98
+ L99 G
99
+ L100 G
100
+ L101 G
101
+ L102 T
102
+ L103 K
103
+ L104 L
104
+ L105 E
105
+ L106 I
106
+ L106A L
107
+ L107 R
108
+ L108 A
109
+ L109 D
sabdab_dataset/2ez0/annotation/2ez0_E_VH.ann ADDED
@@ -0,0 +1,121 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 E
2
+ H2 V
3
+ H3 R
4
+ H4 L
5
+ H5 L
6
+ H6 E
7
+ H7 S
8
+ H8 G
9
+ H9 G
10
+ H10 G
11
+ H11 L
12
+ H12 V
13
+ H13 Q
14
+ H14 P
15
+ H15 G
16
+ H16 G
17
+ H17 S
18
+ H18 L
19
+ H19 K
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 A
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 F
28
+ H28 D
29
+ H29 Y
30
+ H30 S
31
+ H31 R
32
+ H32 Y
33
+ H33 W
34
+ H34 M
35
+ H35 S
36
+ H36 W
37
+ H37 V
38
+ H38 R
39
+ H39 Q
40
+ H40 A
41
+ H41 P
42
+ H42 G
43
+ H43 K
44
+ H44 G
45
+ H45 L
46
+ H46 K
47
+ H47 W
48
+ H48 I
49
+ H49 G
50
+ H50 E
51
+ H51 I
52
+ H52 N
53
+ H52A P
54
+ H53 V
55
+ H54 S
56
+ H55 S
57
+ H56 T
58
+ H57 I
59
+ H58 N
60
+ H59 Y
61
+ H60 T
62
+ H61 P
63
+ H62 S
64
+ H63 L
65
+ H64 K
66
+ H65 D
67
+ H66 K
68
+ H67 F
69
+ H68 I
70
+ H69 I
71
+ H70 S
72
+ H71 R
73
+ H72 D
74
+ H73 N
75
+ H74 A
76
+ H75 K
77
+ H76 D
78
+ H77 T
79
+ H78 L
80
+ H79 Y
81
+ H80 L
82
+ H81 Q
83
+ H82 I
84
+ H82A S
85
+ H82B K
86
+ H82C V
87
+ H83 R
88
+ H84 S
89
+ H85 E
90
+ H86 D
91
+ H87 T
92
+ H88 A
93
+ H89 L
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 A
98
+ H94 R
99
+ H95 L
100
+ H96 Y
101
+ H97 Y
102
+ H98 G
103
+ H99 Y
104
+ H100 G
105
+ H100A Y
106
+ H100B W
107
+ H100C Y
108
+ H100D F
109
+ H101 D
110
+ H102 V
111
+ H103 W
112
+ H104 G
113
+ H105 A
114
+ H106 G
115
+ H107 T
116
+ H108 T
117
+ H109 V
118
+ H110 T
119
+ H111 V
120
+ H112 S
121
+ H113 S