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  1. sabdab_dataset/1ae6/abangle/1ae6.abangle +2 -0
  2. sabdab_dataset/1ae6/annotation/1ae6_H_VH.ann +120 -0
  3. sabdab_dataset/1ae6/annotation/1ae6_L_VL.ann +114 -0
  4. sabdab_dataset/1ae6/imgt/1ae6_H_H.ann +4 -0
  5. sabdab_dataset/1ae6/imgt/1ae6_L_L.ann +4 -0
  6. sabdab_dataset/1ae6/sequence/1ae6_H_VH.fa +6 -0
  7. sabdab_dataset/1ae6/sequence/1ae6_L_VL.fa +6 -0
  8. sabdab_dataset/1ae6/sequence/1ae6_raw.pdb +4 -0
  9. sabdab_dataset/1ae6/structure/1ae6.pdb +0 -0
  10. sabdab_dataset/1ae6/structure/chothia/1ae6.pdb +0 -0
  11. sabdab_dataset/1him/abangle/1him.abangle +3 -0
  12. sabdab_dataset/1him/annotation/1him_H_VL.ann +115 -0
  13. sabdab_dataset/1him/annotation/1him_J_VL.ann +115 -0
  14. sabdab_dataset/1him/annotation/1him_L_VH.ann +120 -0
  15. sabdab_dataset/1him/annotation/1him_M_VH.ann +120 -0
  16. sabdab_dataset/1him/imgt/1him_H_L.ann +4 -0
  17. sabdab_dataset/1him/imgt/1him_J_L.ann +4 -0
  18. sabdab_dataset/1him/imgt/1him_L_H.ann +4 -0
  19. sabdab_dataset/1him/imgt/1him_M_H.ann +4 -0
  20. sabdab_dataset/1him/sequence/1him_H_VL.fa +6 -0
  21. sabdab_dataset/1him/sequence/1him_J_VL.fa +6 -0
  22. sabdab_dataset/1him/sequence/1him_L_VH.fa +6 -0
  23. sabdab_dataset/1him/sequence/1him_M_VH.fa +6 -0
  24. sabdab_dataset/1him/sequence/1him_raw.pdb +12 -0
  25. sabdab_dataset/1him/structure/1him.pdb +0 -0
  26. sabdab_dataset/1him/structure/chothia/1him.pdb +0 -0
  27. sabdab_dataset/1jgv/abangle/1jgv.abangle +2 -0
  28. sabdab_dataset/1jgv/annotation/1jgv_H_VH.ann +118 -0
  29. sabdab_dataset/1jgv/annotation/1jgv_L_VL.ann +115 -0
  30. sabdab_dataset/1jgv/imgt/1jgv_H_H.ann +4 -0
  31. sabdab_dataset/1jgv/imgt/1jgv_L_L.ann +4 -0
  32. sabdab_dataset/1jgv/sequence/1jgv_H_VH.fa +6 -0
  33. sabdab_dataset/1jgv/sequence/1jgv_L_VL.fa +6 -0
  34. sabdab_dataset/1jgv/sequence/1jgv_raw.pdb +4 -0
  35. sabdab_dataset/1jgv/structure/1jgv.pdb +0 -0
  36. sabdab_dataset/1jgv/structure/chothia/1jgv.pdb +0 -0
  37. sabdab_dataset/1nl0/abangle/1nl0.abangle +2 -0
  38. sabdab_dataset/1nl0/annotation/1nl0_H_VH.ann +120 -0
  39. sabdab_dataset/1nl0/annotation/1nl0_L_VL.ann +113 -0
  40. sabdab_dataset/1nl0/imgt/1nl0_H_H.ann +4 -0
  41. sabdab_dataset/1nl0/imgt/1nl0_L_L.ann +4 -0
  42. sabdab_dataset/1nl0/sequence/1nl0_H_VH.fa +6 -0
  43. sabdab_dataset/1nl0/sequence/1nl0_L_VL.fa +6 -0
  44. sabdab_dataset/1nl0/sequence/1nl0_raw.pdb +6 -0
  45. sabdab_dataset/1nl0/structure/1nl0.pdb +0 -0
  46. sabdab_dataset/1nl0/structure/chothia/1nl0.pdb +0 -0
  47. sabdab_dataset/1rjc/annotation/1rjc_A_VH.ann +128 -0
  48. sabdab_dataset/1rjc/imgt/1rjc_A_H.ann +3 -0
  49. sabdab_dataset/1rjc/sequence/1rjc_A_VH.fa +6 -0
  50. sabdab_dataset/1rjc/sequence/1rjc_raw.pdb +4 -0
sabdab_dataset/1ae6/abangle/1ae6.abangle ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1ae6 H L 0 -65.75 70.68 114.19 121.80 81.97 16.30
sabdab_dataset/1ae6/annotation/1ae6_H_VH.ann ADDED
@@ -0,0 +1,120 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 Q
2
+ H2 I
3
+ H3 Q
4
+ H4 L
5
+ H5 Q
6
+ H6 Q
7
+ H7 S
8
+ H8 G
9
+ H9 P
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+ H10 E
11
+ H11 L
12
+ H12 V
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+ H13 K
14
+ H14 P
15
+ H15 G
16
+ H16 A
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+ H17 S
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+ H18 V
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+ H19 K
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+ H20 I
21
+ H21 S
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+ H22 C
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+ H23 K
24
+ H24 A
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+ H25 S
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+ H26 G
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+ H27 Y
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+ H28 T
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+ H29 F
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+ H30 T
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+ H31 D
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+ H32 Y
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+ H33 Y
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+ H34 I
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+ H35 N
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+ H36 W
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+ H37 M
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+ H38 K
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+ H39 Q
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+ H52 D
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+ H52A P
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+ H62 K
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+ H63 F
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+ H64 K
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+ H65 G
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+ H67 A
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+ H68 T
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+ H69 L
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+ H70 T
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+ H71 V
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+ H72 D
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+ H74 S
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+ H75 S
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+ H76 S
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+ H77 T
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+ H78 A
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+ H79 Y
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+ H80 M
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+ H81 Q
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+ H82 L
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+ H82A S
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+ H82B S
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+ H82C L
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+ H86 D
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+ H87 T
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+ H88 A
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+ H91 F
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+ H92 C
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+ H93 A
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+ H94 R
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+ H95 E
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+ H96 K
101
+ H97 T
102
+ H98 T
103
+ H99 Y
104
+ H100 Y
105
+ H100A Y
106
+ H100B A
107
+ H100C M
108
+ H101 D
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+ H102 Y
110
+ H103 W
111
+ H104 G
112
+ H105 Q
113
+ H106 G
114
+ H107 T
115
+ H108 S
116
+ H109 V
117
+ H110 T
118
+ H111 V
119
+ H112 S
120
+ H113 A
sabdab_dataset/1ae6/annotation/1ae6_L_VL.ann ADDED
@@ -0,0 +1,114 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 V
4
+ L4 M
5
+ L5 T
6
+ L6 Q
7
+ L7 A
8
+ L8 A
9
+ L9 P
10
+ L10 S
11
+ L11 V
12
+ L12 P
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+ L13 V
14
+ L14 T
15
+ L15 P
16
+ L16 G
17
+ L17 E
18
+ L18 S
19
+ L19 L
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+ L20 S
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+ L21 I
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+ L22 S
23
+ L23 C
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+ L24 R
25
+ L25 S
26
+ L26 S
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+ L27 K
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+ L28 S
29
+ L29 L
30
+ L30 L
31
+ L30A H
32
+ L30B S
33
+ L30C N
34
+ L30D G
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+ L30E D
36
+ L31 T
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+ L32 F
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+ L33 L
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+ L34 Y
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+ L35 W
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+ L106 L
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+ L109 A
sabdab_dataset/1ae6/imgt/1ae6_H_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGHG1*01 IG IGHC IGHG1 IGHG1 IGg True
3
+ J Mus_musculus IGHJ4*01 IG IGHJ IGHJ4 IGHJ4 NA True
4
+ V Mus_musculus IGHV1-84*02 IG IGHV IGHV1 IGHV1-84 NA True
sabdab_dataset/1ae6/imgt/1ae6_L_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGKC*01 IG IGKC IGKC IGKC NA True
3
+ J Mus_musculus IGKJ4*01 IG IGKJ IGKJ4 IGKJ4 NA True
4
+ V Mus_musculus IGKV2-137*01 IG IGKV IGKV2 IGKV2-137 NA True
sabdab_dataset/1ae6/sequence/1ae6_H_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1ae6_H|seqres|full
2
+ QIQLQQSGPELVKPGASVKISCKASGYTFTDYYINWMKQKPGQGLEWIGWIDPGSGNTKYNEKFKGKATLTVDTSSSTAYMQLSSLTSEDTAVYFCAREKTTYYYAMDYWGQGTSVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIV
3
+ >1ae6_H|seqres|region: H
4
+ QIQLQQSGPELVKPGASVKISCKASGYTFTDYYINWMKQKPGQGLEWIGWIDPGSGNTKYNEKFKGKATLTVDTSSSTAYMQLSSLTSEDTAVYFCAREKTTYYYAMDYWGQGTSVTVSA--------------------------------------------------------------------------------------------------
5
+ >1ae6_H|structure|full
6
+ QIQLQQSGPELVKPGASVKISCKASGYTFTDYYINWMKQKPGQGLEWIGWIDPGSGNTKYNEKFKGKATLTVDTSSSTAYMQLSSLTSEDTAVYFCAREKTTYYYAMDYWGQGTSVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIV
sabdab_dataset/1ae6/sequence/1ae6_L_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1ae6_L|seqres|full
2
+ DIVMTQAAPSVPVTPGESLSISCRSSKSLLHSNGDTFLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLRVSRVEAEDVGVYYCMQHLEYPFTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
3
+ >1ae6_L|seqres|region: L
4
+ DIVMTQAAPSVPVTPGESLSISCRSSKSLLHSNGDTFLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLRVSRVEAEDVGVYYCMQHLEYPFTFGAGTKLELKRA---------------------------------------------------------------------------------------------------------
5
+ >1ae6_L|structure|full
6
+ DIVMTQAAPSVPVTPGESLSISCRSSKSLLHSNGDTFLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLRVSRVEAEDVGVYYCMQHLEYPFTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
sabdab_dataset/1ae6/sequence/1ae6_raw.pdb ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ >1ae6_H|type: H
2
+ QIQLQQSGPELVKPGASVKISCKASGYTFTDYYINWMKQKPGQGLEWIGWIDPGSGNTKYNEKFKGKATLTVDTSSSTAYMQLSSLTSEDTAVYFCAREKTTYYYAMDYWGQGTSVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIV
3
+ >1ae6_L|type: L
4
+ DIVMTQAAPSVPVTPGESLSISCRSSKSLLHSNGDTFLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLRVSRVEAEDVGVYYCMQHLEYPFTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
sabdab_dataset/1ae6/structure/1ae6.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1ae6/structure/chothia/1ae6.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1him/abangle/1him.abangle ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1him L H 0 -58.82 74.06 119.70 118.77 82.83 16.63
3
+ 1him M J 0 -57.88 74.09 119.01 118.57 83.10 16.60
sabdab_dataset/1him/annotation/1him_H_VL.ann ADDED
@@ -0,0 +1,115 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 V
4
+ L4 M
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+ L5 T
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+ L6 Q
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+ L7 S
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+ L8 P
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+ L9 S
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+ L10 S
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+ L11 L
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+ L12 T
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+ L13 V
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+ L14 T
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+ L15 A
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+ L16 G
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+ L17 E
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+ L18 K
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+ L20 T
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+ L22 S
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+ L23 C
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+ L26 S
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+ L29 L
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+ L30 F
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+ L30A N
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+ L30C G
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+ L109 A
sabdab_dataset/1him/annotation/1him_J_VL.ann ADDED
@@ -0,0 +1,115 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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3
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4
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+ L28 S
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+ L29 L
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+ L30 F
31
+ L30A N
32
+ L30B S
33
+ L30C G
34
+ L30D K
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+ L30E Q
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+ L30F K
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113
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114
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115
+ L109 A
sabdab_dataset/1him/annotation/1him_L_VH.ann ADDED
@@ -0,0 +1,120 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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119
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120
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sabdab_dataset/1him/annotation/1him_M_VH.ann ADDED
@@ -0,0 +1,120 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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106
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117
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118
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119
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120
+ H113 A
sabdab_dataset/1him/imgt/1him_H_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGKC*01 IG IGKC IGKC IGKC NA True
3
+ J Mus_musculus IGKJ1*01 IG IGKJ IGKJ1 IGKJ1 NA True
4
+ V Mus_musculus IGKV8-19*01 IG IGKV IGKV8 IGKV8-19 NA True
sabdab_dataset/1him/imgt/1him_J_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGKC*01 IG IGKC IGKC IGKC NA True
3
+ J Mus_musculus IGKJ1*01 IG IGKJ IGKJ1 IGKJ1 NA True
4
+ V Mus_musculus IGKV8-19*01 IG IGKV IGKV8 IGKV8-19 NA True
sabdab_dataset/1him/imgt/1him_L_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGHG2A*01 IG IGHC IGHG2A IGHG2A IGg True
3
+ J Mus_musculus IGHJ3*01 IG IGHJ IGHJ3 IGHJ3 NA True
4
+ V Mus_musculus IGHV5-6*02 IG IGHV IGHV5 IGHV5-6 NA True
sabdab_dataset/1him/imgt/1him_M_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGHG2A*01 IG IGHC IGHG2A IGHG2A IGg True
3
+ J Mus_musculus IGHJ3*01 IG IGHJ IGHJ3 IGHJ3 NA True
4
+ V Mus_musculus IGHV5-6*02 IG IGHV IGHV5 IGHV5-6 NA True
sabdab_dataset/1him/sequence/1him_H_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1him_H|seqres|full
2
+ DIVMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
3
+ >1him_H|seqres|region: L
4
+ DIVMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELKRA------------------------------------------------------------------------------------------------------
5
+ >1him_H|structure|full
6
+ DIVMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
sabdab_dataset/1him/sequence/1him_J_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1him_J|seqres|full
2
+ DIVMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
3
+ >1him_J|seqres|region: L
4
+ DIVMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELKRA------------------------------------------------------------------------------------------------------
5
+ >1him_J|structure|full
6
+ DIVMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
sabdab_dataset/1him/sequence/1him_L_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1him_L|seqres|full
2
+ EVQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRERYDENGFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
3
+ >1him_L|seqres|region: H
4
+ EVQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRERYDENGFAYWGQGTLVTVSA----------------------------------------------------------------------------------------------------
5
+ >1him_L|structure|full
6
+ EVQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRERYDENGFAYWGQGTLVTVSAAKTTAPSVYPLAPV-----GSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
sabdab_dataset/1him/sequence/1him_M_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1him_M|seqres|full
2
+ EVQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRERYDENGFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
3
+ >1him_M|seqres|region: H
4
+ EVQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRERYDENGFAYWGQGTLVTVSA----------------------------------------------------------------------------------------------------
5
+ >1him_M|structure|full
6
+ EVQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRERYDENGFAYWGQGTLVTVSAAKTTAPSVYPLAPV-----GSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
sabdab_dataset/1him/sequence/1him_raw.pdb ADDED
@@ -0,0 +1,12 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ >1him_H|type: L
2
+ DIVMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
3
+ >1him_J|type: L
4
+ DIVMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
5
+ >1him_M|type: H
6
+ EVQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRERYDENGFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
7
+ >1him_L|type: H
8
+ EVQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDSAMYYCARRERYDENGFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
9
+ >1him_P|type: non-ab
10
+ YDVPDYASX
11
+ >1him_R|type: non-ab
12
+ YDVPDYASLX
sabdab_dataset/1him/structure/1him.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1him/structure/chothia/1him.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1jgv/abangle/1jgv.abangle ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1jgv H L 0 -62.20 71.62 119.18 121.83 84.38 16.41
sabdab_dataset/1jgv/annotation/1jgv_H_VH.ann ADDED
@@ -0,0 +1,118 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 E
2
+ H2 V
3
+ H3 K
4
+ H4 L
5
+ H5 V
6
+ H6 E
7
+ H7 S
8
+ H8 R
9
+ H9 G
10
+ H10 G
11
+ H11 L
12
+ H12 V
13
+ H13 K
14
+ H14 P
15
+ H15 G
16
+ H16 G
17
+ H17 S
18
+ H18 L
19
+ H19 Q
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 A
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 F
28
+ H28 T
29
+ H29 F
30
+ H30 S
31
+ H31 G
32
+ H32 Y
33
+ H33 A
34
+ H34 M
35
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36
+ H36 W
37
+ H37 F
38
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39
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40
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41
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42
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43
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44
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45
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46
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47
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48
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49
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50
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51
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52
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53
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54
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55
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56
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57
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58
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59
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60
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61
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62
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63
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64
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65
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66
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67
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68
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69
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71
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74
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75
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77
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78
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79
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80
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81
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82
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83
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84
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85
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86
+ H83 R
87
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88
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89
+ H86 D
90
+ H87 T
91
+ H88 A
92
+ H89 M
93
+ H90 Y
94
+ H91 Y
95
+ H92 C
96
+ H93 S
97
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98
+ H95 G
99
+ H96 D
100
+ H97 A
101
+ H98 Y
102
+ H99 S
103
+ H100 R
104
+ H100A Y
105
+ H100B F
106
+ H101 D
107
+ H102 V
108
+ H103 W
109
+ H104 G
110
+ H105 A
111
+ H106 G
112
+ H107 T
113
+ H108 T
114
+ H109 V
115
+ H110 T
116
+ H111 V
117
+ H112 S
118
+ H113 A
sabdab_dataset/1jgv/annotation/1jgv_L_VL.ann ADDED
@@ -0,0 +1,115 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 E
2
+ L2 V
3
+ L3 V
4
+ L4 M
5
+ L5 T
6
+ L6 Q
7
+ L7 S
8
+ L8 P
9
+ L9 L
10
+ L10 S
11
+ L11 L
12
+ L12 P
13
+ L13 V
14
+ L14 S
15
+ L15 L
16
+ L16 G
17
+ L17 D
18
+ L18 Q
19
+ L19 A
20
+ L20 S
21
+ L21 I
22
+ L22 S
23
+ L23 C
24
+ L24 R
25
+ L25 S
26
+ L26 S
27
+ L27 Q
28
+ L28 S
29
+ L29 L
30
+ L30 V
31
+ L30A H
32
+ L30B S
33
+ L30C N
34
+ L30D G
35
+ L30E N
36
+ L31 T
37
+ L32 Y
38
+ L33 L
39
+ L34 H
40
+ L35 W
41
+ L36 Y
42
+ L37 L
43
+ L38 Q
44
+ L39 K
45
+ L40 P
46
+ L41 G
47
+ L42 Q
48
+ L43 S
49
+ L44 P
50
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51
+ L46 L
52
+ L47 L
53
+ L48 I
54
+ L49 Y
55
+ L50 K
56
+ L51 V
57
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58
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59
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60
+ L55 F
61
+ L56 S
62
+ L57 G
63
+ L58 V
64
+ L59 P
65
+ L60 D
66
+ L61 R
67
+ L62 F
68
+ L63 S
69
+ L64 G
70
+ L65 S
71
+ L66 G
72
+ L67 S
73
+ L68 G
74
+ L69 T
75
+ L70 D
76
+ L71 F
77
+ L72 T
78
+ L73 L
79
+ L74 K
80
+ L75 I
81
+ L76 S
82
+ L77 R
83
+ L78 V
84
+ L79 E
85
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86
+ L81 E
87
+ L82 D
88
+ L83 L
89
+ L84 G
90
+ L85 V
91
+ L86 Y
92
+ L87 F
93
+ L88 C
94
+ L89 S
95
+ L90 Q
96
+ L91 S
97
+ L92 T
98
+ L93 H
99
+ L94 V
100
+ L95 P
101
+ L95A P
102
+ L96 L
103
+ L97 T
104
+ L98 F
105
+ L99 G
106
+ L100 A
107
+ L101 G
108
+ L102 T
109
+ L103 K
110
+ L104 L
111
+ L105 E
112
+ L106 L
113
+ L107 K
114
+ L108 R
115
+ L109 A
sabdab_dataset/1jgv/imgt/1jgv_H_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGHG2A*01 IG IGHC IGHG2A IGHG2A IGg True
3
+ J Mus_musculus IGHJ1*01 IG IGHJ IGHJ1 IGHJ1 NA True
4
+ V Mus_musculus IGHV5-9-3*01 IG IGHV IGHV5 IGHV5-9-3 NA True
sabdab_dataset/1jgv/imgt/1jgv_L_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGKC*01 IG IGKC IGKC IGKC NA True
3
+ J Mus_musculus IGKJ5*01 IG IGKJ IGKJ5 IGKJ5 NA True
4
+ V Mus_musculus IGKV1-110*01 IG IGKV IGKV1 IGKV1-110 NA True
sabdab_dataset/1jgv/sequence/1jgv_H_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1jgv_H|seqres|full
2
+ EVKLVESRGGLVKPGGSLQLSCAASGFTFSGYAMSWFRLTPEKRLEWVASIYNGFRIHYLDSVKGRFTISSDYARNILYLQMSTLRSEDTAMYYCSRGDAYSRYFDVWGAGTTVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
3
+ >1jgv_H|seqres|region: H
4
+ EVKLVESRGGLVKPGGSLQLSCAASGFTFSGYAMSWFRLTPEKRLEWVASIYNGFRIHYLDSVKGRFTISSDYARNILYLQMSTLRSEDTAMYYCSRGDAYSRYFDVWGAGTTVTVSA----------------------------------------------------------------------------------------------------
5
+ >1jgv_H|structure|full
6
+ EVKLVESRGGLVKPGGSLQLSCAASGFTFSGYAMSWFRLTPEKRLEWVASIYNGFRIHYLDSVKGRFTISSDYARNILYLQMSTLRSEDTAMYYCSRGDAYSRYFDVWGAGTTVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
sabdab_dataset/1jgv/sequence/1jgv_L_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1jgv_L|seqres|full
2
+ EVVMTQSPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
3
+ >1jgv_L|seqres|region: L
4
+ EVVMTQSPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGAGTKLELKRA---------------------------------------------------------------------------------------------------------
5
+ >1jgv_L|structure|full
6
+ EVVMTQSPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
sabdab_dataset/1jgv/sequence/1jgv_raw.pdb ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ >1jgv_H|type: H
2
+ EVKLVESRGGLVKPGGSLQLSCAASGFTFSGYAMSWFRLTPEKRLEWVASIYNGFRIHYLDSVKGRFTISSDYARNILYLQMSTLRSEDTAMYYCSRGDAYSRYFDVWGAGTTVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
3
+ >1jgv_L|type: L
4
+ EVVMTQSPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
sabdab_dataset/1jgv/structure/1jgv.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1jgv/structure/chothia/1jgv.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1nl0/abangle/1nl0.abangle ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1nl0 H L 0 -63.03 70.12 118.88 118.70 82.22 15.80
sabdab_dataset/1nl0/annotation/1nl0_H_VH.ann ADDED
@@ -0,0 +1,120 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 G
2
+ H2 V
3
+ H3 Q
4
+ H4 L
5
+ H5 V
6
+ H6 E
7
+ H7 S
8
+ H8 G
9
+ H9 G
10
+ H10 G
11
+ H11 V
12
+ H12 V
13
+ H13 Q
14
+ H14 P
15
+ H15 G
16
+ H16 R
17
+ H17 S
18
+ H18 L
19
+ H19 R
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 A
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 F
28
+ H28 T
29
+ H29 F
30
+ H30 S
31
+ H31 T
32
+ H32 Y
33
+ H33 A
34
+ H34 M
35
+ H35 H
36
+ H36 W
37
+ H37 V
38
+ H38 R
39
+ H39 Q
40
+ H40 A
41
+ H41 P
42
+ H42 G
43
+ H43 K
44
+ H44 G
45
+ H45 L
46
+ H46 E
47
+ H47 W
48
+ H48 V
49
+ H49 A
50
+ H50 I
51
+ H51 I
52
+ H52 S
53
+ H52A Y
54
+ H53 D
55
+ H54 G
56
+ H55 S
57
+ H56 K
58
+ H57 K
59
+ H58 Y
60
+ H59 Y
61
+ H60 A
62
+ H61 D
63
+ H62 S
64
+ H63 V
65
+ H64 K
66
+ H65 G
67
+ H66 R
68
+ H67 F
69
+ H68 T
70
+ H69 I
71
+ H70 S
72
+ H71 R
73
+ H72 D
74
+ H73 N
75
+ H74 S
76
+ H75 K
77
+ H76 N
78
+ H77 T
79
+ H78 L
80
+ H79 Y
81
+ H80 L
82
+ H81 Q
83
+ H82 M
84
+ H82A N
85
+ H82B S
86
+ H82C L
87
+ H83 R
88
+ H84 A
89
+ H85 E
90
+ H86 D
91
+ H87 T
92
+ H88 A
93
+ H89 V
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 A
98
+ H94 R
99
+ H95 A
100
+ H96 S
101
+ H97 I
102
+ H98 A
103
+ H99 A
104
+ H100 A
105
+ H100A R
106
+ H100B V
107
+ H100C L
108
+ H101 D
109
+ H102 Y
110
+ H103 W
111
+ H104 G
112
+ H105 R
113
+ H106 G
114
+ H107 T
115
+ H108 M
116
+ H109 V
117
+ H110 T
118
+ H111 V
119
+ H112 S
120
+ H113 S
sabdab_dataset/1nl0/annotation/1nl0_L_VL.ann ADDED
@@ -0,0 +1,113 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 Q
2
+ L2 S
3
+ L3 V
4
+ L4 L
5
+ L5 T
6
+ L6 Q
7
+ L7 P
8
+ L8 P
9
+ L9 S
10
+ L11 V
11
+ L12 S
12
+ L13 A
13
+ L14 A
14
+ L15 P
15
+ L16 G
16
+ L17 Q
17
+ L18 K
18
+ L19 V
19
+ L20 T
20
+ L21 I
21
+ L22 S
22
+ L23 C
23
+ L24 S
24
+ L25 G
25
+ L26 S
26
+ L27 T
27
+ L28 S
28
+ L29 N
29
+ L30 I
30
+ L30A G
31
+ L30B N
32
+ L31 N
33
+ L32 Y
34
+ L33 V
35
+ L34 S
36
+ L35 W
37
+ L36 Y
38
+ L37 Q
39
+ L38 Q
40
+ L39 H
41
+ L40 P
42
+ L41 G
43
+ L42 K
44
+ L43 A
45
+ L44 P
46
+ L45 K
47
+ L46 L
48
+ L47 M
49
+ L48 I
50
+ L49 Y
51
+ L50 D
52
+ L51 V
53
+ L52 S
54
+ L53 K
55
+ L54 R
56
+ L55 P
57
+ L56 S
58
+ L57 G
59
+ L58 V
60
+ L59 P
61
+ L60 D
62
+ L61 R
63
+ L62 F
64
+ L63 S
65
+ L64 G
66
+ L65 S
67
+ L66 K
68
+ L67 S
69
+ L68 G
70
+ L69 N
71
+ L70 S
72
+ L71 A
73
+ L72 S
74
+ L73 L
75
+ L74 D
76
+ L75 I
77
+ L76 S
78
+ L77 G
79
+ L78 L
80
+ L79 Q
81
+ L80 S
82
+ L81 E
83
+ L82 D
84
+ L83 E
85
+ L84 A
86
+ L85 D
87
+ L86 Y
88
+ L87 Y
89
+ L88 C
90
+ L89 A
91
+ L90 A
92
+ L91 W
93
+ L92 D
94
+ L93 D
95
+ L94 S
96
+ L95 L
97
+ L95A S
98
+ L95B E
99
+ L96 F
100
+ L97 L
101
+ L98 F
102
+ L99 G
103
+ L100 T
104
+ L101 G
105
+ L102 T
106
+ L103 K
107
+ L104 L
108
+ L105 T
109
+ L106 V
110
+ L106A L
111
+ L107 G
112
+ L108 Q
113
+ L109 P
sabdab_dataset/1nl0/imgt/1nl0_H_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Homo_sapiens IGHG1*03 IG IGHC IGHG1 IGHG1 IGg True
3
+ J Homo_sapiens IGHJ4*01 IG IGHJ IGHJ4 IGHJ4 NA True
4
+ V Homo_sapiens IGHV3-30*01 IG IGHV IGHV3 IGHV3-30 NA True
sabdab_dataset/1nl0/imgt/1nl0_L_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Homo_sapiens IGLC3*03 IG IGLC IGLC3 IGLC3 NA True
3
+ J Homo_sapiens IGLJ1*01 IG IGLJ IGLJ1 IGLJ1 NA True
4
+ V Homo_sapiens IGLV1-51*01 IG IGLV IGLV1 IGLV1-51 NA True
sabdab_dataset/1nl0/sequence/1nl0_H_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1nl0_H|seqres|full
2
+ GVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAIISYDGSKKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARASIAAARVLDYWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
3
+ >1nl0_H|seqres|region: H
4
+ GVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAIISYDGSKKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARASIAAARVLDYWGRGTMVTVSS--------------------------------------------------------------------------------------------------------
5
+ >1nl0_H|structure|full
6
+ GVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAIISYDGSKKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARASIAAARVLDYWGRGTMVTVSSASTKGPSVFPLAP--------TAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
sabdab_dataset/1nl0/sequence/1nl0_L_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1nl0_L|seqres|full
2
+ QSVLTQPPSVSAAPGQKVTISCSGSTSNIGNNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNSASLDISGLQSEDEADYYCAAWDDSLSEFLFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT
3
+ >1nl0_L|seqres|region: L
4
+ QSVLTQPPSVSAAPGQKVTISCSGSTSNIGNNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNSASLDISGLQSEDEADYYCAAWDDSLSEFLFGTGTKLTVLGQP----------------------------------------------------------------------------------------------------
5
+ >1nl0_L|structure|full
6
+ QSVLTQPPSVSAAPGQKVTISCSGSTSNIGNNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNSASLDISGLQSEDEADYYCAAWDDSLSEFLFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT
sabdab_dataset/1nl0/sequence/1nl0_raw.pdb ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1nl0_H|type: H
2
+ GVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAIISYDGSKKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARASIAAARVLDYWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
3
+ >1nl0_L|type: L
4
+ QSVLTQPPSVSAAPGQKVTISCSGSTSNIGNNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNSASLDISGLQSEDEADYYCAAWDDSLSEFLFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT
5
+ >1nl0_G|type: non-ab
6
+ YNSGKLEEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYEEEEEE
sabdab_dataset/1nl0/structure/1nl0.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1nl0/structure/chothia/1nl0.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1rjc/annotation/1rjc_A_VH.ann ADDED
@@ -0,0 +1,128 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 E
2
+ H2 V
3
+ H3 Q
4
+ H4 L
5
+ H5 Q
6
+ H6 A
7
+ H7 S
8
+ H8 G
9
+ H9 G
10
+ H10 G
11
+ H11 S
12
+ H12 V
13
+ H13 Q
14
+ H14 A
15
+ H15 G
16
+ H16 Q
17
+ H17 S
18
+ H18 L
19
+ H19 R
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 A
24
+ H24 T
25
+ H25 S
26
+ H26 G
27
+ H27 A
28
+ H28 T
29
+ H29 S
30
+ H30 S
31
+ H31 S
32
+ H32 N
33
+ H33 C
34
+ H34 M
35
+ H35 G
36
+ H36 W
37
+ H37 F
38
+ H38 R
39
+ H39 Q
40
+ H40 A
41
+ H41 P
42
+ H42 G
43
+ H43 K
44
+ H44 E
45
+ H45 R
46
+ H46 E
47
+ H47 G
48
+ H48 V
49
+ H49 A
50
+ H50 V
51
+ H51 I
52
+ H52 D
53
+ H52A T
54
+ H53 G
55
+ H54 R
56
+ H55 G
57
+ H56 N
58
+ H57 T
59
+ H58 A
60
+ H59 Y
61
+ H60 A
62
+ H61 D
63
+ H62 S
64
+ H63 V
65
+ H64 Q
66
+ H65 G
67
+ H66 R
68
+ H67 L
69
+ H68 T
70
+ H69 I
71
+ H70 S
72
+ H71 L
73
+ H72 D
74
+ H73 N
75
+ H74 A
76
+ H75 K
77
+ H76 N
78
+ H77 T
79
+ H78 L
80
+ H79 Y
81
+ H80 L
82
+ H81 Q
83
+ H82 M
84
+ H82A N
85
+ H82B S
86
+ H82C L
87
+ H83 K
88
+ H84 P
89
+ H85 E
90
+ H86 D
91
+ H87 T
92
+ H88 A
93
+ H89 M
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 A
98
+ H94 A
99
+ H95 D
100
+ H96 T
101
+ H97 S
102
+ H98 T
103
+ H99 W
104
+ H100 Y
105
+ H100A R
106
+ H100B G
107
+ H100C Y
108
+ H100D C
109
+ H100E G
110
+ H100F T
111
+ H100G N
112
+ H100H P
113
+ H100I N
114
+ H100J Y
115
+ H100K F
116
+ H101 S
117
+ H102 Y
118
+ H103 W
119
+ H104 G
120
+ H105 Q
121
+ H106 G
122
+ H107 T
123
+ H108 Q
124
+ H109 V
125
+ H110 T
126
+ H111 V
127
+ H112 S
128
+ H113 S
sabdab_dataset/1rjc/imgt/1rjc_A_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Lamgla IGHJ4*01 IG IGHJ ? IGHJ4 NA False
3
+ V Lamgla IGHV1S3*01 IG IGHV IGHV1 IGHV1S3 NA False
sabdab_dataset/1rjc/sequence/1rjc_A_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1rjc_A|seqres|full
2
+ EVQLQASGGGSVQAGQSLRLSCATSGATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDNAKNTLYLQMNSLKPEDTAMYYCAADTSTWYRGYCGTNPNYFSYWGQGTQVTVSSRGRHHHHHH
3
+ >1rjc_A|seqres|region: H
4
+ EVQLQASGGGSVQAGQSLRLSCATSGATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDNAKNTLYLQMNSLKPEDTAMYYCAADTSTWYRGYCGTNPNYFSYWGQGTQVTVSS---------
5
+ >1rjc_A|structure|full
6
+ -VQLQASGGGSVQAGQSLRLSCATS-ATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDN--NTLYLQMNSLKPEDTAMYYCAADTSTWYRGYCGTNPNYFSYWGQGTQVTVS----------
sabdab_dataset/1rjc/sequence/1rjc_raw.pdb ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ >1rjc_A|type: H
2
+ EVQLQASGGGSVQAGQSLRLSCATSGATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDNAKNTLYLQMNSLKPEDTAMYYCAADTSTWYRGYCGTNPNYFSYWGQGTQVTVSSRGRHHHHHH
3
+ >1rjc_B|type: non-ab
4
+ KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL