pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
354 values
r_factor
stringclasses
342 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
8cim
F
G
0
B
protein
null
spike glycoprotein,fibritin
VIRUS
07/05/23
BA.2-07 FAB IN COMPLEX WITH SARS-COV-2 BA.2.12.1 SPIKE GLYCOPROTEIN
Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2, enterobacteria phage t4
Duyvesteyn, H.M.E., Ren, J., Stuart, D.I., Fry, E.E.
3.0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
8cim
H
L
0
C
protein
null
spike glycoprotein,fibritin
VIRUS
07/05/23
BA.2-07 FAB IN COMPLEX WITH SARS-COV-2 BA.2.12.1 SPIKE GLYCOPROTEIN
Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2, enterobacteria phage t4
Duyvesteyn, H.M.E., Ren, J., Stuart, D.I., Fry, E.E.
3.0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
8de3
B
C
0
A
protein
null
transporter
MEMBRANE PROTEIN
07/05/23
Native serotonin transporter in complex with 15B8 Fab antibody in the presence of cocaine
Mus musculus; Sus scrofa
mus musculus
mus musculus
sus scrofa
Yang, D., Gouaux, E.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
8de4
B
C
0
A
protein
null
transporter
MEMBRANE PROTEIN
07/05/23
Native serotonin transporter in complex with 15B8 Fab in the presence of methamphetamine
Mus musculus; Sus scrofa
mus musculus
mus musculus
sus scrofa
Yang, D., Gouaux, E.
2.9
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
8dgr
A
a
0
null
null
null
null
IMMUNE SYSTEM
07/05/23
Crystal Structure of scFv(F8) Antibody Fragment
Artichoke mottled crinkle virus
artichoke mottled crinkle virus
null
null
Mrozek, A., Park, H.W.
1.56
X-RAY DIFFRACTION
0.195
0.175
true
true
unknown
unknown
unknown
null
null
null
null
null
8dul
H
L
0
A | K
protein | protein
NA | NA
spike glycoprotein e1 | spike glycoprotein e2
IMMUNE SYSTEM
07/05/23
Cryo-EM Structure of Antibody SKT05 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles)
Macaca fascicularis; Western equine encephalitis virus
macaca fascicularis
macaca fascicularis
western equine encephalitis virus | western equine encephalitis virus
Cerutti, G., Verardi, R., Roederer, M., Shapiro, L.
4.17
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8dun
H
L
0
G
protein
null
spike glycoprotein e2
IMMUNE SYSTEM
07/05/23
Cryo-EM Structure of Antibody SKW11 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles)
Macaca fascicularis; Western equine encephalitis virus
macaca fascicularis
macaca fascicularis
western equine encephalitis virus
Cerutti, G., Verardi, R., Roederer, M., Shapiro, L.
5.84
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
8dun
I
M
0
K
protein
null
spike glycoprotein e2
IMMUNE SYSTEM
07/05/23
Cryo-EM Structure of Antibody SKW11 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles)
Macaca fascicularis; Western equine encephalitis virus
macaca fascicularis
macaca fascicularis
western equine encephalitis virus
Cerutti, G., Verardi, R., Roederer, M., Shapiro, L.
5.84
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
8dun
N
O
0
B
protein
null
spike glycoprotein e2
IMMUNE SYSTEM
07/05/23
Cryo-EM Structure of Antibody SKW11 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles)
Macaca fascicularis; Western equine encephalitis virus
macaca fascicularis
macaca fascicularis
western equine encephalitis virus
Cerutti, G., Verardi, R., Roederer, M., Shapiro, L.
5.84
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
8duz
A
B
0
F
peptide
null
mimetic peptide
IMMUNE SYSTEM
07/05/23
Protective antibody against gonococcal lipooligosaccharide bound to peptide mimetic
Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
bacteriophage sp.
Beernink, P.T., Beernink, B.P., Rice, P.A., Ram, S.
1.65
X-RAY DIFFRACTION
0.234
0.189
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8duz
C
D
0
E
peptide
null
mimetic peptide
IMMUNE SYSTEM
07/05/23
Protective antibody against gonococcal lipooligosaccharide bound to peptide mimetic
Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
bacteriophage sp.
Beernink, P.T., Beernink, B.P., Rice, P.A., Ram, S.
1.65
X-RAY DIFFRACTION
0.234
0.189
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8elo
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/05/23
Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-225
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, H., Wilson, I.A.
2.72
X-RAY DIFFRACTION
0.261
0.220
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8elo
B
null
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/05/23
Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-225
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
synthetic construct
null
severe acute respiratory syndrome coronavirus2
Liu, H., Wilson, I.A.
2.72
X-RAY DIFFRACTION
0.261
0.220
false
true
IGHV3
null
null
null
null
null
null
null
8elp
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/05/23
Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-240
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, H., Wilson, I.A.
2.83
X-RAY DIFFRACTION
0.284
0.238
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8elp
B
null
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/05/23
Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-240
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
synthetic construct
null
severe acute respiratory syndrome coronavirus2
Liu, H., Wilson, I.A.
2.83
X-RAY DIFFRACTION
0.284
0.238
false
true
IGHV3
null
null
null
null
null
null
null
8elq
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/05/23
Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-255
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, H., Wilson, I.A.
2.21
X-RAY DIFFRACTION
0.285
0.234
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8elq
B
null
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
07/05/23
Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-255
Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
synthetic construct
null
severe acute respiratory syndrome coronavirus2
Liu, H., Wilson, I.A.
2.21
X-RAY DIFFRACTION
0.285
0.234
false
true
IGHV3
null
null
null
null
null
null
null
8pii
A
null
0
B
peptide
null
microtubule-associated protein tau
IMMUNE SYSTEM
07/05/23
VHH Z70 mutant 1 in interaction with PHF6 Tau peptide
Lama glama; SYNTHETIC CONSTRUCT
lama glama
null
homo sapiens
Dupre, E., Mortelecque, J., NGuyen, M., Hanoulle, X., Landrieu, I.
2.35
X-RAY DIFFRACTION
0.263
0.200
false
true
IGHV3
null
null
null
null
null
null
null
8dt8
H
null
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
06/14/23
LM18/Nb136 bispecific tetra-nanobody immunoglobulin in complex with SARS-CoV-2-6P-Mut7 S protein (focused refinement)
Severe acute respiratory syndrome coronavirus 2; synthetic construct
synthetic construct
null
severe acute respiratory syndrome coronavirus2
Ozorowski, G., Turner, H.L., Ward, A.B.
3.34
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
8dt8
D
null
0
A | B
protein | protein
NA | NA
spike glycoprotein | spike glycoprotein
VIRAL PROTEIN
06/14/23
LM18/Nb136 bispecific tetra-nanobody immunoglobulin in complex with SARS-CoV-2-6P-Mut7 S protein (focused refinement)
Severe acute respiratory syndrome coronavirus 2; synthetic construct
synthetic construct
null
severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2
Ozorowski, G., Turner, H.L., Ward, A.B.
3.34
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7u0g
N
n
0
G | E | H
protein | protein | protein
NA | NA | NA
histone h2a type 2-c | histone h3.1 | histone h2b type 2-e
TRANSCRIPTION/DNA
06/28/23
structure of LIN28b nucleosome bound 3 OCT4
Escherichia coli K-12; Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens | homo sapiens
Lian, T., Guan, R., Bai, Y.
2.6
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7u0g
O
o
0
C | D
protein | protein
NA | NA
histone h2a type 2-c | histone h2b type 2-e
TRANSCRIPTION/DNA
06/28/23
structure of LIN28b nucleosome bound 3 OCT4
Escherichia coli K-12; Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens
Lian, T., Guan, R., Bai, Y.
2.6
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7u0i
K
k
0
G | E | H | F
protein | protein | protein | protein
NA | NA | NA | NA
histone h2a type 2-c | histone h3.1 | histone h2b type 2-e | histone h4
TRANSCRIPTION/DNA
06/28/23
Structure of LIN28b nucleosome bound 2 OCT4
Escherichia coli K-12; Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens | homo sapiens | homo sapiens
Tengfei, L., Guan, R., Bai, Y.
2.6
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7u0i
N
n
0
C | D
protein | protein
NA | NA
histone h2a type 2-c | histone h2b type 2-e
TRANSCRIPTION/DNA
06/28/23
Structure of LIN28b nucleosome bound 2 OCT4
Escherichia coli K-12; Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens
Tengfei, L., Guan, R., Bai, Y.
2.6
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7u0j
K
k
0
G | E | H | F
protein | protein | protein | protein
NA | NA | NA | NA
histone h2a type 2-c | histone h3.1 | histone h2b type 2-e | histone h4
TRANSCRIPTION/DNA
06/28/23
Structure of 162bp LIN28b nucleosome
Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens | homo sapiens | homo sapiens
Lian, T., Guan, R., Bai, Y.
2.7
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7u0j
N
n
0
C | B | D
protein | protein | protein
NA | NA | NA
histone h2a type 2-c | histone h4 | histone h2b type 2-e
TRANSCRIPTION/DNA
06/28/23
Structure of 162bp LIN28b nucleosome
Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens | homo sapiens | homo sapiens
Lian, T., Guan, R., Bai, Y.
2.7
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7zor
I
M
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-Siglec-15 Fab
Homo sapiens
homo sapiens
homo sapiens
null
Lenza, M.P., Oyenarte, I., Jimenez-Barbero, J., Ereno-Orbea, J.
3.933
X-RAY DIFFRACTION
0.273
0.229
false
true
IGHV1
IGKV14
Kappa
null
null
null
null
null
7zor
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-Siglec-15 Fab
Homo sapiens
homo sapiens
homo sapiens
null
Lenza, M.P., Oyenarte, I., Jimenez-Barbero, J., Ereno-Orbea, J.
3.933
X-RAY DIFFRACTION
0.273
0.229
false
true
IGHV1
IGKV14
Kappa
null
null
null
null
null
7zoz
H
L
0
A
protein
null
sialic acid-binding ig-like lectin 15
IMMUNE SYSTEM
06/28/23
Crystal structure of Siglec-15 in complex with Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Lenza, M.P., Oyenarte, I., Jimenez-Barbero, J., Ereno-Orbea, J.
2.104
X-RAY DIFFRACTION
0.218
0.176
false
true
IGHV1
IGKV14
Kappa
null
null
null
null
null
8sps
K
k
0
G | E | L | H | F
protein | protein | protein | protein | protein
NA | NA | NA | NA | NA
histone h2a type 2-c | histone h3.1 | maltodextrin-binding protein,pou domain, class 5,transcription factor 1 | histone h2b type 2-e | histone h4
TRANSCRIPTION/DNA
06/28/23
High resolution structure of ESRRB nucleosome bound OCT4 at site a and site b
Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
null
null
homo sapiens | homo sapiens | homo sapiens | homo sapiens | homo sapiens
Lian, T., Guan, R., Bai, Y.
3.0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
8sps
N
n
0
C | B | D
protein | protein | protein
NA | NA | NA
histone h2a type 2-c | histone h4 | histone h2b type 2-e
TRANSCRIPTION/DNA
06/28/23
High resolution structure of ESRRB nucleosome bound OCT4 at site a and site b
Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
null
null
homo sapiens | homo sapiens | homo sapiens
Lian, T., Guan, R., Bai, Y.
3.0
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
8spu
N
n
0
C | B | D | A
protein | protein | protein | protein
NA | NA | NA | NA
histone h2a type 2-c | histone h4 | histone h2b type 2-e | histone h3.1
TRANSCRIPTION/DNA
06/28/23
Structure of ESRRB nucleosome bound OCT4 at site c
Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
null
null
homo sapiens | homo sapiens | homo sapiens | homo sapiens
Lian, T., Guan, R., Bai, Y.
2.8
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
8spu
K
k
0
G | H | F
protein | protein | protein
NA | NA | NA
histone h2a type 2-c | histone h2b type 2-e | histone h4
TRANSCRIPTION/DNA
06/28/23
Structure of ESRRB nucleosome bound OCT4 at site c
Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
null
null
homo sapiens | homo sapiens | homo sapiens
Lian, T., Guan, R., Bai, Y.
2.8
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
8e1g
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN
06/28/23
SARS-CoV-2 RBD in complex with Omicron-neutralizing antibody 2A10
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wasserman, H., Hastie, K.M., Buck, T.K., Saphire, E.O.
2.57
X-RAY DIFFRACTION
0.244
0.196
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8e1g
V
T
0
B
protein
null
spike protein s1
VIRAL PROTEIN
06/28/23
SARS-CoV-2 RBD in complex with Omicron-neutralizing antibody 2A10
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wasserman, H., Hastie, K.M., Buck, T.K., Saphire, E.O.
2.57
X-RAY DIFFRACTION
0.244
0.196
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8gou
I
J
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH003 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
8gou
H
K
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH003 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
8guz
A
B
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-FIXa IgG fab with FAST-Ig mutations
Homo sapiens
homo sapiens
homo sapiens
null
Koga, H., Yamano, T., Fukami, T.A., Sampei, Z., Shiraiwa, H., Torizawa, T.
1.79
X-RAY DIFFRACTION
0.273
0.201
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
8guz
C
D
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-FIXa IgG fab with FAST-Ig mutations
Homo sapiens
homo sapiens
homo sapiens
null
Koga, H., Yamano, T., Fukami, T.A., Sampei, Z., Shiraiwa, H., Torizawa, T.
1.79
X-RAY DIFFRACTION
0.273
0.201
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
8gv1
A
B
0
null
null
null
null
IMMUNE SYSTEM
06/28/23
Crystal structure of anti-FX IgG fab with FAST-Ig mutations
Homo sapiens
homo sapiens
homo sapiens
null
Koga, H., Yamano, T., Fukami, T.A., Sampei, Z., Shiraiwa, H., Torizawa, T.
1.186
X-RAY DIFFRACTION
0.227
0.206
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
8jlz
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
06/28/23
ST1936-5HT6R complex
Camelus bactrianus; Homo sapiens
camelus bactrianus
null
homo sapiens | homo sapiens
Wen, X., Sun, J.
3.09
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
8smt
A
B
0
C
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
06/28/23
Crystal structure of antibody WRAIR-2134 in complex with SARS-CoV-2 receptor binding domain
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Sankhala, R.S., Jensen, J.L., Joyce, M.G.
3.16
X-RAY DIFFRACTION
0.249
0.214
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
8smt
D
F
0
G
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
06/28/23
Crystal structure of antibody WRAIR-2134 in complex with SARS-CoV-2 receptor binding domain
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Sankhala, R.S., Jensen, J.L., Joyce, M.G.
3.16
X-RAY DIFFRACTION
0.249
0.214
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
8smt
H
L
0
E
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
06/28/23
Crystal structure of antibody WRAIR-2134 in complex with SARS-CoV-2 receptor binding domain
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Sankhala, R.S., Jensen, J.L., Joyce, M.G.
3.16
X-RAY DIFFRACTION
0.249
0.214
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
8smt
I
J
0
K
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
06/28/23
Crystal structure of antibody WRAIR-2134 in complex with SARS-CoV-2 receptor binding domain
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Sankhala, R.S., Jensen, J.L., Joyce, M.G.
3.16
X-RAY DIFFRACTION
0.249
0.214
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
7ytn
H
L
0
C
protein
null
spike protein s1
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/28/23
Crystal structure of SARS-CoV-2 Alpha RBD in complex with the D27LEY neutralizing antibody Fab fragment
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Jeong, B.S., Jeon, J.Y., Oh, B.H.
3.51
X-RAY DIFFRACTION
0.274
0.237
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
7yve
I
H
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH027 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV1
Lambda
null
null
null
null
null
7yve
L
K
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH027 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV1
Lambda
null
null
null
null
null
7yve
O
N
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH027 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV1
Lambda
null
null
null
null
null
7yvf
C
A
0
B
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH027 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV1
Lambda
null
null
null
null
null
7yvg
I
H
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH132 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7yvg
K
J
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH132 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7yvg
M
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH132 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7yvh
C
A
0
B
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH132 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7yvi
J
H
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH236 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
7yvi
O
N
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH236 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
7yvi
K
I
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH236 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
7yvj
C
A
0
B
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH236 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
7yvk
H
I
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH272 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV2
Lambda
null
null
null
null
null
7yvk
K
L
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH272 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV2
Lambda
null
null
null
null
null
7yvk
N
O
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH272 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV2
Lambda
null
null
null
null
null
7yvl
A
C
0
B
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH272 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV2
Lambda
null
null
null
null
null
7yvm
C
A
0
B
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH272 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7yvn
L
K
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH281 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7yvn
O
N
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH281 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7yvn
null
H
0
null
null
null
null
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH281 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
null
homo sapiens
null
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.4
ELECTRON MICROSCOPY
null
null
false
true
null
IGKV3
Kappa
null
null
null
null
null
7yvn
I
null
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH281 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7yvo
I
H
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH027/132 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7yvo
K
J
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH027/132 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7yvo
M
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH027/132 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV1
Lambda
null
null
null
null
null
7yvo
O
N
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/ANTIVIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH027/132 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV1
Lambda
null
null
null
null
null
7yvp
L
M
0
C
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH272/281 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGLV2
Lambda
null
null
null
null
null
7yvp
P
O
0
C
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH272/281 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7yvp
K
H
0
A
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH272/281 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7yvp
I
null
0
A
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH272/281 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
null
null
null
null
null
null
null
7yvp
null
J
0
A
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN/VIRAL PROTEIN
06/28/23
Omicron BA.4/5 SARS-CoV-2 S in complex with TH272/281 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
null
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
3.8
ELECTRON MICROSCOPY
null
null
false
true
null
IGLV2
Lambda
null
null
null
null
null
8deq
H
L
0
F | D
protein | protein
NA | NA
spike glycoprotein e1 | spike glycoprotein e1
VIRAL PROTEIN
06/28/23
Cryo-EM local refinement of antibody SKV09 in complex with VEEV alphavirus spike glycoprotein
Macaca; Venezuelan equine encephalitis virus
macaca
macaca
venezuelan equine encephalitis virus | venezuelan equine encephalitis virus
Casner, R.G., Verardi, R., Roederer, M., Shapiro, L.
6.0
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
8der
X
Y
0
B
protein
null
spike glycoprotein e2
VIRAL PROTEIN
06/28/23
Cryo-EM local refinement of antibody SKV16 in complex with VEEV alphavirus spike glycoprotein
Macaca; Venezuelan equine encephalitis virus
macaca
macaca
venezuelan equine encephalitis virus
Casner, R.G., Verardi, R., Roederer, M., Shapiro, L.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
8der
H
L
0
A
protein
null
spike glycoprotein e2
VIRAL PROTEIN
06/28/23
Cryo-EM local refinement of antibody SKV16 in complex with VEEV alphavirus spike glycoprotein
Macaca; Venezuelan equine encephalitis virus
macaca
macaca
venezuelan equine encephalitis virus
Casner, R.G., Verardi, R., Roederer, M., Shapiro, L.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
8der
W
V
0
C
protein
null
spike glycoprotein e2
VIRAL PROTEIN
06/28/23
Cryo-EM local refinement of antibody SKV16 in complex with VEEV alphavirus spike glycoprotein
Macaca; Venezuelan equine encephalitis virus
macaca
macaca
venezuelan equine encephalitis virus
Casner, R.G., Verardi, R., Roederer, M., Shapiro, L.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
8pe9
H
L
0
A
protein
null
epithelial discoidin domain-containing receptor 1
IMMUNE SYSTEM
06/28/23
Complex between DDR1 DS-like domain and PRTH-101 Fab
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Liu, J., Chiang, H., Xiong, W., Laurent, V., Griffiths, S.C., Duelfer, J., Deng, H., Sun, X., Yin, Y.W., Li, W., Audoly, L.P., An, Z., Schuerpf, T., Li, R., Zhang, N.
3.152
X-RAY DIFFRACTION
0.309
0.278
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7y6l
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
06/21/23
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab816
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Uchikubo, T., Shirouzu, M.
3.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
7y6n
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
06/21/23
The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab803
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Uchikubo, T., Shirouzu, M.
4.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8doz
A
B
0
null
null
null
null
IMMUNE SYSTEM
06/21/23
Protective antibody against gonococcal lipooligosaccharide
Mus musculus
mus musculus
mus musculus
null
Beernink, P.T.
1.7
X-RAY DIFFRACTION
0.216
0.177
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8doz
C
D
0
null
null
null
null
IMMUNE SYSTEM
06/21/23
Protective antibody against gonococcal lipooligosaccharide
Mus musculus
mus musculus
mus musculus
null
Beernink, P.T.
1.7
X-RAY DIFFRACTION
0.216
0.177
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8e1m
H
L
0
C
protein
null
mitochondrial import inner membrane translocase subunittim44
TRANSLOCASE/IMMUNE SYSTEM
06/21/23
Cryo-EM structure of the endogenous core TIM23 complex from S. cerevisiae
Mus musculus; Saccharomyces cerevisiae
mus musculus
mus musculus
saccharomyces cerevisiae
Sim, S.I., Park, E.
2.9
ELECTRON MICROSCOPY
null
null
false
true
IGHV2
IGKV3
Kappa
null
null
null
null
null
8e1p
F
I
0
E
protein
null
bg505-sosip.v4.1-gt1.2gp120
VIRAL PROTEIN/IMMUNE SYSTEM
01/08/09
Crystal structure of BG505 SOSIP.v4.1-GT1.2 trimer in complex with gl-PGV20 and PGT124 Fabs
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Sarkar, A., Kumar, S., Wilson, I.A.
3.82
X-RAY DIFFRACTION
0.301
0.271
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
8e1p
H
L
0
G
protein
null
bg505-sosip.v4.1-gt1.2gp120
VIRAL PROTEIN/IMMUNE SYSTEM
01/08/09
Crystal structure of BG505 SOSIP.v4.1-GT1.2 trimer in complex with gl-PGV20 and PGT124 Fabs
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Sarkar, A., Kumar, S., Wilson, I.A.
3.82
X-RAY DIFFRACTION
0.301
0.271
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
8e1p
N
O
0
M
protein
null
bg505-sosip.v4.1-gt1.2gp120
VIRAL PROTEIN/IMMUNE SYSTEM
01/08/09
Crystal structure of BG505 SOSIP.v4.1-GT1.2 trimer in complex with gl-PGV20 and PGT124 Fabs
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Sarkar, A., Kumar, S., Wilson, I.A.
3.82
X-RAY DIFFRACTION
0.301
0.271
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
8e1p
B
A
0
G
protein
null
bg505-sosip.v4.1-gt1.2gp120
VIRAL PROTEIN/IMMUNE SYSTEM
01/08/09
Crystal structure of BG505 SOSIP.v4.1-GT1.2 trimer in complex with gl-PGV20 and PGT124 Fabs
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Sarkar, A., Kumar, S., Wilson, I.A.
3.82
X-RAY DIFFRACTION
0.301
0.271
false
true
IGHV4
unknown
unknown
null
null
null
null
null
8e1p
D
C
0
E
protein
null
bg505-sosip.v4.1-gt1.2gp120
VIRAL PROTEIN/IMMUNE SYSTEM
01/08/09
Crystal structure of BG505 SOSIP.v4.1-GT1.2 trimer in complex with gl-PGV20 and PGT124 Fabs
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Sarkar, A., Kumar, S., Wilson, I.A.
3.82
X-RAY DIFFRACTION
0.301
0.271
false
true
IGHV4
unknown
unknown
null
null
null
null
null
8e1p
K
J
0
M
protein
null
bg505-sosip.v4.1-gt1.2gp120
VIRAL PROTEIN/IMMUNE SYSTEM
01/08/09
Crystal structure of BG505 SOSIP.v4.1-GT1.2 trimer in complex with gl-PGV20 and PGT124 Fabs
Homo sapiens; Human immunodeficiency virus 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Sarkar, A., Kumar, S., Wilson, I.A.
3.82
X-RAY DIFFRACTION
0.301
0.271
false
true
IGHV4
unknown
unknown
null
null
null
null
null
8e8l
H
L
0
1 | 2 | 3
protein | protein | protein
NA | NA | NA
capsid protein vp1 | capsid protein vp2 | capsid protein vp3
VIRUS/IMMUNE SYSTEM
06/21/23
9H2 Fab-poliovirus 1 complex
Homo sapiens; Human poliovirus 1 Mahoney
homo sapiens
homo sapiens
human poliovirus 1 mahoney | human poliovirus 1 mahoney | human poliovirus 1 mahoney
Charnesky, A.J.
3.13
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
8e8r
H
L
0
1 | 2 | 3
protein | protein | protein
NA | NA | NA
capsid protein vp1 | capsid protein vp2 | capsid protein vp3
VIRUS/IMMUNE SYSTEM
06/21/23
9H2 Fab-Sabin poliovirus 3 complex
Homo sapiens; Human poliovirus 3 strain Sabin
homo sapiens
homo sapiens
human poliovirus 3 strain sabin | human poliovirus 3 strain sabin | human poliovirus 3 strain sabin
Charnesky, A.J.
2.66
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
8e8s
H
L
0
1 | 2 | 3
protein | protein | protein
NA | NA | NA
capsid protein vp1 | capsid protein vp2 | capsid protein vp3
VIRUS/IMMUNE SYSTEM
06/21/23
9H2 Fab-poliovirus 2 complex
Homo sapiens; Poliovirus 2
homo sapiens
homo sapiens
poliovirus 2 | poliovirus 2 | poliovirus 2
Charnesky, A.J.
2.73
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
8e8x
H
L
0
1 | 2 | 3
protein | protein | protein
NA | NA | NA
capsid protein vp1 | capsid protein vp2 | capsid protein vp3
VIRUS/IMMUNE SYSTEM
06/21/23
9H2 Fab-Sabin poliovirus 3 complex
Homo sapiens; Human poliovirus 3 strain Sabin
homo sapiens
homo sapiens
human poliovirus 3 strain sabin | human poliovirus 3 strain sabin | human poliovirus 3 strain sabin
Charnesky, A.J.
2.91
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
8e8y
H
L
0
1 | 2 | 3
protein | protein | protein
NA | NA | NA
capsid protein vp1 | capsid protein vp2 | capsid protein vp3
VIRUS/IMMUNE SYSTEM
06/21/23
9H2 Fab-Sabin poliovirus 2 complex
Homo sapiens; Human poliovirus 2 strain Sabin
homo sapiens
homo sapiens
human poliovirus 2 strain sabin | human poliovirus 2 strain sabin | human poliovirus 2 strain sabin
Charnesky, A.J.
2.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
8e8z
H
L
0
1 | 2 | 3
protein | protein | protein
NA | NA | NA
capsid protein vp1 | capsid protein vp2 | capsid protein vp3
VIRUS/IMMUNE SYSTEM
06/21/23
9H2 Fab-Sabin poliovirus 1 complex
Homo sapiens; Human poliovirus 1 strain Sabin
homo sapiens
homo sapiens
human poliovirus 1 strain sabin | human poliovirus 1 strain sabin | human poliovirus 1 strain sabin
Charnesky, A.J.
3.15
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
8fxs
D
null
0
A
protein
null
transforming growth factor beta-2 proprotein
CYTOKINE
06/21/23
Crystal structure of human pro-TGF-beta2 in complex with Nb9
Homo sapiens; synthetic construct
synthetic construct
null
homo sapiens
Le, V.Q., Springer, T.A.
3.15
X-RAY DIFFRACTION
0.301
0.249
false
true
IGHV1
null
null
null
null
null
null
null
8fxs
E
null
0
B
protein
null
transforming growth factor beta-2 proprotein
CYTOKINE
06/21/23
Crystal structure of human pro-TGF-beta2 in complex with Nb9
Homo sapiens; synthetic construct
synthetic construct
null
homo sapiens
Le, V.Q., Springer, T.A.
3.15
X-RAY DIFFRACTION
0.301
0.249
false
true
IGHV1
null
null
null
null
null
null
null