pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
354 values
r_factor
stringclasses
342 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
7tn9
G
H
0
T
protein
null
envelope glycoprotein
IMMUNE SYSTEM/VIRAL PROTEIN
01/25/23
Structure of the Inmazeb cocktail and resistance to escape against Ebola virus
Ebola virus - Mayinga, Zaire, 1976; Mus musculus
mus musculus
mus musculus
ebola virus - mayinga, zaire, 1976
Rayaprolu, V., Fulton, B., Rafique, A., Arturo, E., Williams, D., Hariharan, C., Callaway, H., Parvate, A., Schendel, S.L., Parekh, D., Hui, S., Shaffer, K., Pascal, K.E., Wloga, E., Giordano, S., Copin, R., Franklin, M., Boytz, R.M., Donahue, C., Davey, R., Baum, A., Kyratsous, C.A., Saphire, E.O.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7tn9
O
P
0
V
protein
null
gp2
IMMUNE SYSTEM/VIRAL PROTEIN
01/25/23
Structure of the Inmazeb cocktail and resistance to escape against Ebola virus
Ebola virus - Mayinga, Zaire, 1976; Mus musculus
mus musculus
mus musculus
ebola virus - mayinga, zaire, 1976
Rayaprolu, V., Fulton, B., Rafique, A., Arturo, E., Williams, D., Hariharan, C., Callaway, H., Parvate, A., Schendel, S.L., Parekh, D., Hui, S., Shaffer, K., Pascal, K.E., Wloga, E., Giordano, S., Copin, R., Franklin, M., Boytz, R.M., Donahue, C., Davey, R., Baum, A., Kyratsous, C.A., Saphire, E.O.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7tn9
I
J
0
U
protein
null
envelope glycoprotein
IMMUNE SYSTEM/VIRAL PROTEIN
01/25/23
Structure of the Inmazeb cocktail and resistance to escape against Ebola virus
Ebola virus - Mayinga, Zaire, 1976; Mus musculus
mus musculus
mus musculus
ebola virus - mayinga, zaire, 1976
Rayaprolu, V., Fulton, B., Rafique, A., Arturo, E., Williams, D., Hariharan, C., Callaway, H., Parvate, A., Schendel, S.L., Parekh, D., Hui, S., Shaffer, K., Pascal, K.E., Wloga, E., Giordano, S., Copin, R., Franklin, M., Boytz, R.M., Donahue, C., Davey, R., Baum, A., Kyratsous, C.A., Saphire, E.O.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7tn9
C
D
0
T
protein
null
envelope glycoprotein
IMMUNE SYSTEM/VIRAL PROTEIN
01/25/23
Structure of the Inmazeb cocktail and resistance to escape against Ebola virus
Ebola virus - Mayinga, Zaire, 1976; Mus musculus
mus musculus
mus musculus
ebola virus - mayinga, zaire, 1976
Rayaprolu, V., Fulton, B., Rafique, A., Arturo, E., Williams, D., Hariharan, C., Callaway, H., Parvate, A., Schendel, S.L., Parekh, D., Hui, S., Shaffer, K., Pascal, K.E., Wloga, E., Giordano, S., Copin, R., Franklin, M., Boytz, R.M., Donahue, C., Davey, R., Baum, A., Kyratsous, C.A., Saphire, E.O.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV4
Kappa
null
null
null
null
null
7yxu
H
L
0
A
protein
null
tumor necrosis factor receptor superfamily member 9
IMMUNE SYSTEM
01/25/23
Crystal structure of agonistic antibody 1618 fab domain bound to human 4-1BB.
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Hakansson, M., Rose, N., Petersson, J., Enell Smith, K., Thorolfsson, M., von Schantz, L.
2.31
X-RAY DIFFRACTION
0.252
0.205
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8de6
E
F
0
A | C
protein | protein
NA | NA
complement component c9 | complement component c9
IMMUNE SYSTEM
01/08/09
Oligomeric C9 in complex with aE11 Fab
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens | homo sapiens
Bayly-Jones, C.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV2
IGKV10
Kappa
null
null
null
null
null
8de6
B
I
0
G
protein
null
complement component c9
IMMUNE SYSTEM
01/08/09
Oligomeric C9 in complex with aE11 Fab
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens
Bayly-Jones, C.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV2
IGKV10
Kappa
null
null
null
null
null
7t5o
H
L
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
VFLIP Spike Trimer with GAR03
Homo sapiens; Severe acute respiratory syndrome-related coronavirus
homo sapiens
homo sapiens
severe acute respiratory syndrome-relatedcoronavirus
Sobti, M., Stewart, A.G., Rouet, R., Langley, D.B.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
7t8x
E
e
0
B | C
protein | protein
NA | NA
guanine nucleotide-binding protein g(o) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
01/25/23
Cryo-EM structure of ACh-bound M2R-Go signaling complex in S1 state
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens
Xu, J., Wang, Q., Du, Y., Kobilka, B.K.
3.21
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7t90
E
e
0
B | C
protein | protein
NA | NA
guanine nucleotide-binding protein g(o) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
01/25/23
Cryo-EM structure of ACh-bound M2R-Go signaling complex in S2 state
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens
Xu, J., Wang, Q., Du, Y., Kobilka, B.K.
3.32
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7t94
E
e
0
B | C
protein | protein
NA | NA
guanine nucleotide-binding protein g(o) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
01/25/23
Cryo-EM structure of S1 state ACh-bound M2R-Go signaling complex with a PAM
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens
Xu, J., Wang, Q., Du, Y., Kobilka, B.K.
3.16
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7t96
E
e
0
B | C
protein | protein
NA | NA
guanine nucleotide-binding protein g(o) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
01/25/23
Cryo-EM structure of S2 state ACh-bound M2R-Go signaling complex with a PAM
Homo sapiens; Mus musculus
mus musculus
null
homo sapiens | homo sapiens
Xu, J., Wang, Q., Du, Y., Kobilka, B.K.
3.22
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7wn8
H
L
0
A
protein
null
leukocyte surface antigen cd47
ANTITUMOR PROTEIN
01/25/23
Crystal structure of antibody (BC31M5) binds to CD47
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Li, Y., Wang, W., Sui, J., Zhang, S.
2.8
X-RAY DIFFRACTION
0.276
0.243
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7wn8
P
Q
0
C
protein
null
leukocyte surface antigen cd47
ANTITUMOR PROTEIN
01/25/23
Crystal structure of antibody (BC31M5) binds to CD47
Homo sapiens
homo sapiens
homo sapiens
homo sapiens
Li, Y., Wang, W., Sui, J., Zhang, S.
2.8
X-RAY DIFFRACTION
0.276
0.243
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7wqv
B
b
0
A
protein
null
spike protein s1
VIRAL PROTEIN
01/25/23
Crystal structure of a neutralizing monoclonal antibody (Ab08) in complex with SARS-CoV-2 receptor-binding domain (RBD)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Zha, J., Meng, L., Zhang, X., Li, D.
2.8
X-RAY DIFFRACTION
0.251
0.220
true
true
unknown
unknown
unknown
null
null
null
null
null
7wqv
D
d
0
C
protein
null
spike protein s1
VIRAL PROTEIN
01/25/23
Crystal structure of a neutralizing monoclonal antibody (Ab08) in complex with SARS-CoV-2 receptor-binding domain (RBD)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Zha, J., Meng, L., Zhang, X., Li, D.
2.8
X-RAY DIFFRACTION
0.251
0.220
true
true
unknown
unknown
unknown
null
null
null
null
null
7wqv
F
f
0
E
protein
null
spike protein s1
VIRAL PROTEIN
01/25/23
Crystal structure of a neutralizing monoclonal antibody (Ab08) in complex with SARS-CoV-2 receptor-binding domain (RBD)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Zha, J., Meng, L., Zhang, X., Li, D.
2.8
X-RAY DIFFRACTION
0.251
0.220
true
true
unknown
unknown
unknown
null
null
null
null
null
7wqv
H
h
0
G
protein
null
spike protein s1
VIRAL PROTEIN
01/25/23
Crystal structure of a neutralizing monoclonal antibody (Ab08) in complex with SARS-CoV-2 receptor-binding domain (RBD)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Zha, J., Meng, L., Zhang, X., Li, D.
2.8
X-RAY DIFFRACTION
0.251
0.220
true
true
unknown
unknown
unknown
null
null
null
null
null
7wqv
J
j
0
I
protein
null
spike protein s1
VIRAL PROTEIN
01/25/23
Crystal structure of a neutralizing monoclonal antibody (Ab08) in complex with SARS-CoV-2 receptor-binding domain (RBD)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Zha, J., Meng, L., Zhang, X., Li, D.
2.8
X-RAY DIFFRACTION
0.251
0.220
true
true
unknown
unknown
unknown
null
null
null
null
null
7wqv
L
l
0
K
protein
null
spike protein s1
VIRAL PROTEIN
01/25/23
Crystal structure of a neutralizing monoclonal antibody (Ab08) in complex with SARS-CoV-2 receptor-binding domain (RBD)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Zha, J., Meng, L., Zhang, X., Li, D.
2.8
X-RAY DIFFRACTION
0.251
0.220
true
true
unknown
unknown
unknown
null
null
null
null
null
7wqv
N
n
0
M
protein
null
spike protein s1
VIRAL PROTEIN
01/25/23
Crystal structure of a neutralizing monoclonal antibody (Ab08) in complex with SARS-CoV-2 receptor-binding domain (RBD)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Zha, J., Meng, L., Zhang, X., Li, D.
2.8
X-RAY DIFFRACTION
0.251
0.220
true
true
unknown
unknown
unknown
null
null
null
null
null
7wqv
P
p
0
O
protein
null
spike protein s1
VIRAL PROTEIN
01/25/23
Crystal structure of a neutralizing monoclonal antibody (Ab08) in complex with SARS-CoV-2 receptor-binding domain (RBD)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
null
severe acute respiratory syndrome coronavirus2
Zha, J., Meng, L., Zhang, X., Li, D.
2.8
X-RAY DIFFRACTION
0.251
0.220
true
true
unknown
unknown
unknown
null
null
null
null
null
8be1
A
B
0
C
protein
null
spike protein s1
IMMUNE SYSTEM
01/25/23
SARS-CoV-2 RBD in complex with a Fab fragment of a neutralising antibody mRBD2
Mus musculus; Severe acute respiratory syndrome coronavirus 2
mus musculus
mus musculus
severe acute respiratory syndrome coronavirus2
Lulla, A., Brear, P., Fischer, K., Hollfelder, F., Hyvonen, M.
1.98
X-RAY DIFFRACTION
0.284
0.248
false
true
IGHV1
IGKV9
Kappa
null
null
null
null
null
8be1
D
E
0
F
protein
null
spike protein s1
IMMUNE SYSTEM
01/25/23
SARS-CoV-2 RBD in complex with a Fab fragment of a neutralising antibody mRBD2
Mus musculus; Severe acute respiratory syndrome coronavirus 2
mus musculus
mus musculus
severe acute respiratory syndrome coronavirus2
Lulla, A., Brear, P., Fischer, K., Hollfelder, F., Hyvonen, M.
1.98
X-RAY DIFFRACTION
0.284
0.248
false
true
IGHV1
IGKV9
Kappa
null
null
null
null
null
8d48
H
L
0
A
protein
null
spike glycoprotein
ANTIVIRAL PROTEIN
01/25/23
sd1.040 Fab in complex with SARS-CoV-2 Spike 2P glycoprotein
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Abernathy, M.E., Barnes, C.O.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
8db4
A
B
0
E
protein
null
ara h 2 allergen
ALLERGEN/IMMUNE SYSTEM
01/25/23
Crystal structure of the peanut allergen Ara h 2 bound by two neutralizing antibodies 22S1 and 13T1
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Min, J., Pedersen, L.C.
2.3
X-RAY DIFFRACTION
0.246
0.211
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
8db4
C
D
0
E
protein
null
ara h 2 allergen
ALLERGEN/IMMUNE SYSTEM
01/25/23
Crystal structure of the peanut allergen Ara h 2 bound by two neutralizing antibodies 22S1 and 13T1
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Min, J., Pedersen, L.C.
2.3
X-RAY DIFFRACTION
0.246
0.211
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8db4
G
H
0
F
protein
null
ara h 2 allergen
ALLERGEN/IMMUNE SYSTEM
01/25/23
Crystal structure of the peanut allergen Ara h 2 bound by two neutralizing antibodies 22S1 and 13T1
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Min, J., Pedersen, L.C.
2.3
X-RAY DIFFRACTION
0.246
0.211
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
8db4
I
J
0
F
protein
null
ara h 2 allergen
ALLERGEN/IMMUNE SYSTEM
01/25/23
Crystal structure of the peanut allergen Ara h 2 bound by two neutralizing antibodies 22S1 and 13T1
Arachis hypogaea; Homo sapiens
homo sapiens
homo sapiens
arachis hypogaea
Min, J., Pedersen, L.C.
2.3
X-RAY DIFFRACTION
0.246
0.211
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8dgu
H
L
0
A
peptide
null
spike protein s2'
IMMUNE SYSTEM
01/25/23
Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC25.106 isolated from a vaccinated COVID-19 convalescent
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, H., Wilson, I.A.
1.89
X-RAY DIFFRACTION
0.245
0.214
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8dgv
H
L
0
A
peptide
null
spike protein s2'
IMMUNE SYSTEM
01/25/23
Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC99.103 isolated from a vaccinated COVID-19 convalescent
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
middle east respiratory syndrome-relatedcoronavirus (isolate united kingdom/h123990006/2012)
Liu, H., Wilson, I.A.
2.3
X-RAY DIFFRACTION
0.249
0.203
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
8dgw
H
L
0
G
peptide
null
spike protein s2'
IMMUNE SYSTEM
01/25/23
Crystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC95.108 isolated from a vaccinated COVID-19 convalescent
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human coronavirus hku1 (isolate n1)
Liu, H., Wilson, I.A.
2.81
X-RAY DIFFRACTION
0.248
0.217
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8dgw
A
B
0
I
peptide
null
spike protein s2'
IMMUNE SYSTEM
01/25/23
Crystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC95.108 isolated from a vaccinated COVID-19 convalescent
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human coronavirus hku1 (isolate n1)
Liu, H., Wilson, I.A.
2.81
X-RAY DIFFRACTION
0.248
0.217
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8dgw
C
D
0
J
peptide
null
spike protein s2'
IMMUNE SYSTEM
01/25/23
Crystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC95.108 isolated from a vaccinated COVID-19 convalescent
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human coronavirus hku1 (isolate n1)
Liu, H., Wilson, I.A.
2.81
X-RAY DIFFRACTION
0.248
0.217
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8dgw
E
F
0
K
peptide
null
spike protein s2'
IMMUNE SYSTEM
01/25/23
Crystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC95.108 isolated from a vaccinated COVID-19 convalescent
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human coronavirus hku1 (isolate n1)
Liu, H., Wilson, I.A.
2.81
X-RAY DIFFRACTION
0.248
0.217
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8dgx
H
L
0
C
peptide
null
spike protein s2'
IMMUNE SYSTEM
01/25/23
Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC68.109 isolated from a vaccinated COVID-19 convalescent
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
middle east respiratory syndrome-relatedcoronavirus (isolate united kingdom/h123990006/2012)
Liu, H., Wilson, I.A.
2.89
X-RAY DIFFRACTION
0.280
0.233
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
8dgx
A
B
0
D
peptide
null
spike protein s2'
IMMUNE SYSTEM
01/25/23
Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC68.109 isolated from a vaccinated COVID-19 convalescent
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
middle east respiratory syndrome-relatedcoronavirus (isolate united kingdom/h123990006/2012)
Liu, H., Wilson, I.A.
2.89
X-RAY DIFFRACTION
0.280
0.233
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
8dl6
D
C
0
A
protein
null
solute carrier family 40 member 1
MEMBRANE PROTEIN
01/25/23
Cryo-EM structure of human ferroportin/slc40 bound to Ca2+ in nanodisc
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens
Shen, J., Wilbon, A.S., Pan, Y., Zhou, M.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV14
IGKV6
Kappa
null
null
null
null
null
8dm3
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
Cryo-EM structure of SARS-CoV-2 Omicron BA.2 spike protein in complex with Fab 4A8
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhu, X., Saville, J.W., Mannar, D., Berezuk, A.M., Cholak, S., Tuttle, K.S., Vahdatihassani, F., Subramaniam, S.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV2
Kappa
null
null
null
null
null
8dm3
M
N
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
Cryo-EM structure of SARS-CoV-2 Omicron BA.2 spike protein in complex with Fab 4A8
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhu, X., Saville, J.W., Mannar, D., Berezuk, A.M., Cholak, S., Tuttle, K.S., Vahdatihassani, F., Subramaniam, S.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV2
Kappa
null
null
null
null
null
8dm3
P
Q
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
Cryo-EM structure of SARS-CoV-2 Omicron BA.2 spike protein in complex with Fab 4A8
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhu, X., Saville, J.W., Mannar, D., Berezuk, A.M., Cholak, S., Tuttle, K.S., Vahdatihassani, F., Subramaniam, S.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV2
Kappa
null
null
null
null
null
8dm4
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
Cryo-EM structure of SARS-CoV-2 Omicron BA.2 spike protein in complex with Fab 4A8 (focused refinement of NTD and 4A8)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhu, X., Saville, J.W., Mannar, D., Berezuk, A.M., Cholak, S., Tuttle, K.S., Vahdatihassani, F., Subramaniam, S.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV2
Kappa
null
null
null
null
null
8ek6
H
L
0
null
null
null
null
IMMUNE SYSTEM
01/25/23
UCA Y35N (unbound) Fab from CH65-CH67 lineage
Homo sapiens
homo sapiens
homo sapiens
null
Maurer, D.P., Schmidt, A.G.
1.954
X-RAY DIFFRACTION
0.216
0.185
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
8ekh
H
L
0
null
null
null
null
IMMUNE SYSTEM
01/25/23
I-2 Y35N H35N (unbound) Fab from CH65-CH67 lineage
Homo sapiens
homo sapiens
homo sapiens
null
Maurer, D.P., Schmidt, A.G.
2.7
X-RAY DIFFRACTION
0.283
0.245
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
8epa
H
L
0
I
protein
null
cytokine receptor common subunit gamma
IMMUNE SYSTEM
01/25/23
Structure of interleukin receptor common gamma chain (IL2Rgamma) in complex with two antibodies
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens
Franklin, M.C., Romero Hernandez, A.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8epa
A
B
0
I
protein
null
cytokine receptor common subunit gamma
IMMUNE SYSTEM
01/25/23
Structure of interleukin receptor common gamma chain (IL2Rgamma) in complex with two antibodies
Homo sapiens; Mus musculus
mus musculus
mus musculus
homo sapiens
Franklin, M.C., Romero Hernandez, A.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8hc2
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 1 YB9-258 Fab (1 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8hc3
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 2 YB9-258 Fabs (2 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8hc3
D
E
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 2 YB9-258 Fabs (2 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8hc4
D
E
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 wildtype spike trimer (6P) in complex with 3 YB9-258 Fabs and 3 R1-32 Fabs (3 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8hc4
F
J
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 wildtype spike trimer (6P) in complex with 3 YB9-258 Fabs and 3 R1-32 Fabs (3 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8hc4
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 wildtype spike trimer (6P) in complex with 3 YB9-258 Fabs and 3 R1-32 Fabs (3 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8hc4
K
M
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 wildtype spike trimer (6P) in complex with 3 YB9-258 Fabs and 3 R1-32 Fabs (3 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8hc4
G
I
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 wildtype spike trimer (6P) in complex with 3 YB9-258 Fabs and 3 R1-32 Fabs (3 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8hc4
N
O
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 wildtype spike trimer (6P) in complex with 3 YB9-258 Fabs and 3 R1-32 Fabs (3 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8hc5
H
L
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 wildtype S1 in complex with YB9-258 Fab and R1-32 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8hc5
D
E
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 wildtype S1 in complex with YB9-258 Fab and R1-32 Fab
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
8hc6
H
L
0
C
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with YB9-258 Fab, focused refinement of Fab region
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8hc7
H
L
0
C
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) complex with YB9-258 Fab, focused refinement of RBD-dimer region
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8hc8
H
L
0
C
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with YB13-292 Fab, focused refinement of Fab region
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
8hc9
D
E
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (3 RBD down)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
8hc9
F
G
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (3 RBD down)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
8hc9
H
L
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (3 RBD down)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
8hca
D
E
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (1 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
8hca
F
G
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (1 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
8hca
H
L
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (1 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
8hcb
D
E
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (2 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
8hcb
F
G
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (2 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
8hcb
H
L
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/25/23
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (2 RBD up)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
7wvd
G
H
0
D | C
protein | protein
NA | NA
hemagglutinin | hemagglutinin
VIRUS
01/18/23
Crystal structure of H14 complexed with SIA28
Homo sapiens; Influenza A virus
homo sapiens
homo sapiens
influenza a virus | influenza a virus
Chen, Y., Qi, J., Gao, G.F.
3.39
X-RAY DIFFRACTION
0.261
0.221
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7wvd
I
J
0
F | A | E
protein | protein | protein
NA | NA | NA
hemagglutinin | hemagglutinin | hemagglutinin
VIRUS
01/18/23
Crystal structure of H14 complexed with SIA28
Homo sapiens; Influenza A virus
homo sapiens
homo sapiens
influenza a virus | influenza a virus | influenza a virus
Chen, Y., Qi, J., Gao, G.F.
3.39
X-RAY DIFFRACTION
0.261
0.221
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7ucx
H
L
0
B
peptide
null
cyclized cr1 peptide
TRANSPORT PROTEIN
01/18/23
LRP8 11H1 Fab complexed to a cyclized CR1 peptide
Homo sapiens; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens
Argiriadi, M.A., Deng, K., Egan, D., Gao, L., Gizatullin, F., Harlan, J., Karaoglu, D., Qiu, W., Goodearl, A.
1.72
X-RAY DIFFRACTION
0.240
0.205
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
7wh8
B
A
0
C
protein
null
spike glycoprotein
IMMUNE SYSTEM/VIRAL PROTEIN
01/18/23
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (focused refinement on Fab-RBD)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zeng, J.W.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7whb
D
E
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/18/23
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zeng, J.W., Ge, J.W., Wang, X.Q.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7whb
G
H
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/18/23
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zeng, J.W., Ge, J.W., Wang, X.Q.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7whb
J
K
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/18/23
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zeng, J.W., Ge, J.W., Wang, X.Q.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7whd
D
E
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/18/23
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zeng, J.W., Wang, X.W., Ge, J.W., Wang, Z.Y.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7whd
G
H
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/18/23
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zeng, J.W., Wang, X.W., Ge, J.W., Wang, Z.Y.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7whd
J
K
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/18/23
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zeng, J.W., Wang, X.W., Ge, J.W., Wang, Z.Y.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7wvg
C
D
0
B | A
protein | protein
NA | NA
hemagglutinin | hemagglutinin
VIRUS
01/18/23
Crystal structure of H18 complexed with SIA28
Homo sapiens; Influenza A virus
homo sapiens
homo sapiens
influenza a virus | influenza a virus
Chen, Y., Qi, J., Gao, G.F.
2.6
X-RAY DIFFRACTION
0.224
0.212
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7wvi
A
B
0
null
null
null
null
VIRUS with monoclonal antibody
01/18/23
Crystal structure of SIA28
Homo sapiens
homo sapiens
homo sapiens
null
Chen, Y., Qi, J., Gao, G.F.
2.48
X-RAY DIFFRACTION
0.230
0.195
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7wvi
C
D
0
null
null
null
null
VIRUS with monoclonal antibody
01/18/23
Crystal structure of SIA28
Homo sapiens
homo sapiens
homo sapiens
null
Chen, Y., Qi, J., Gao, G.F.
2.48
X-RAY DIFFRACTION
0.230
0.195
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7x25
A
C
0
G
protein
null
spike glycoprotein
VIRAL PROTEIN
01/18/23
MERS-CoV spike complex with S41 neutralizing antibody Fab Class4 (2u1d RBD with 3Fab)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zeng, J.W., Zhang, S.Y., Zhou, H.X., Wang, X.W.
2.49
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7x25
E
F
0
J
protein
null
spike glycoprotein
VIRAL PROTEIN
01/18/23
MERS-CoV spike complex with S41 neutralizing antibody Fab Class4 (2u1d RBD with 3Fab)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zeng, J.W., Zhang, S.Y., Zhou, H.X., Wang, X.W.
2.49
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7x25
H
K
0
I
protein
null
spike glycoprotein
VIRAL PROTEIN
01/18/23
MERS-CoV spike complex with S41 neutralizing antibody Fab Class4 (2u1d RBD with 3Fab)
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zeng, J.W., Zhang, S.Y., Zhou, H.X., Wang, X.W.
2.49
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7x28
C
D
0
F
protein
null
spike glycoprotein
VIRAL PROTEIN
01/18/23
MERS-CoV spike complex with S41 neutralizing antibody Fab Class3 (2u1d RBD with 2Fab)
Homo sapiens; Middle East respiratory syndrome-related coronavirus
homo sapiens
homo sapiens
middle east respiratory syndrome-relatedcoronavirus
Zeng, J.W., Zhang, S.Y., Zhou, H.X., Wang, X.W.
2.49
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7x28
H
K
0
G
protein
null
spike glycoprotein
VIRAL PROTEIN
01/18/23
MERS-CoV spike complex with S41 neutralizing antibody Fab Class3 (2u1d RBD with 2Fab)
Homo sapiens; Middle East respiratory syndrome-related coronavirus
homo sapiens
homo sapiens
middle east respiratory syndrome-relatedcoronavirus
Zeng, J.W., Zhang, S.Y., Zhou, H.X., Wang, X.W.
2.49
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7x8q
C
B
0
A
protein
null
frizzled-10
SIGNALING PROTEIN
01/18/23
Frizzled-10 CRD in complex with F10_A9 Fab
Homo sapiens; synthetic construct
synthetic construct
synthetic construct
homo sapiens
Ge, Q., Wang, Q.
2.65
X-RAY DIFFRACTION
0.247
0.205
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7x8q
F
E
0
D
protein
null
frizzled-10
SIGNALING PROTEIN
01/18/23
Frizzled-10 CRD in complex with F10_A9 Fab
Homo sapiens; synthetic construct
synthetic construct
synthetic construct
homo sapiens
Ge, Q., Wang, Q.
2.65
X-RAY DIFFRACTION
0.247
0.205
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8dxt
H
L
0
R
protein
null
spike protein s1
ANTIVIRAL PROTEIN
01/18/23
Fab arm of antibody GAR12 bound to the receptor binding domain of SARS-CoV-2.
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Langley, D.B., Christ, D., Henry, J.Y.
2.25
X-RAY DIFFRACTION
0.254
0.211
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8dxu
H
L
0
R
protein
null
spike protein s1
ANTIVIRAL PROTEIN
01/18/23
Fab arms of antibodies GAR03 and 10G4 bound to the receptor binding domain of SARS-CoV-2 in a 1:1:1 complex.
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Langley, D.B., Christ, D.
2.728
X-RAY DIFFRACTION
0.269
0.223
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
8dxu
A
B
0
R
protein
null
spike protein s1
ANTIVIRAL PROTEIN
01/18/23
Fab arms of antibodies GAR03 and 10G4 bound to the receptor binding domain of SARS-CoV-2 in a 1:1:1 complex.
Homo sapiens; Severe acute respiratory syndrome coronavirus 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Langley, D.B., Christ, D.
2.728
X-RAY DIFFRACTION
0.269
0.223
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
8e0e
B
null
0
A
protein
null
voltage-dependent l-type calcium channel subunit beta-2
TRANSPORT PROTEIN/IMMUNE SYSTEM
01/18/23
nbF3:CaV beta subunit 2a complex
Lama glama; Rattus norvegicus
lama glama
null
rattus norvegicus
Nirwan, N., Minor, D.L.
2
X-RAY DIFFRACTION
0.221
0.197
false
true
IGHV1
null
null
null
null
null
null
null
8fbw
C
D
0
E
peptide
null
siv v2 peptide
IMMUNE SYSTEM/VIRAL PROTEIN
01/18/23
Crystal structure of SIV-1 V2 antibody NCI05 in complex with a V2 peptide
Macaca mulatta; SYNTHETIC CONSTRUCT
macaca mulatta
macaca mulatta
simian immunodeficiency virus
Zhou, T., Kwong, P.D., Van Wazer, D.
2.35
X-RAY DIFFRACTION
0.246
0.194
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
8fbw
A
B
0
F
peptide
null
siv v2 peptide
IMMUNE SYSTEM/VIRAL PROTEIN
01/18/23
Crystal structure of SIV-1 V2 antibody NCI05 in complex with a V2 peptide
Macaca mulatta; SYNTHETIC CONSTRUCT
macaca mulatta
macaca mulatta
simian immunodeficiency virus
Zhou, T., Kwong, P.D., Van Wazer, D.
2.35
X-RAY DIFFRACTION
0.246
0.194
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
8gni
C
null
0
A
protein
null
nad(+) hydrolase sarm1
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, Conformation 1
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8gnj
C
null
0
A
protein
null
nad(+) hydrolase sarm1
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, Conformation 2
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
8gq5
a
null
0
A
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
8gq5
b
null
0
B
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null
8gq5
c
null
0
C
protein
null
nanobody c6
HYDROLASE
01/18/23
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Homo sapiens; Vicugna pacos
vicugna pacos
null
homo sapiens
Cai, Y., Zhang, H.
0
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
null
null
null
null
null
null
null