| license: mit | |
| task_categories: | |
| - feature-extraction | |
| - other | |
| tags: | |
| - proteomics | |
| - mass-spectrometry | |
| - peptide-search | |
| - bioinformatics | |
| size_categories: | |
| - n<1K | |
| # MS/MS Search Sample Data | |
| ## Dataset Description | |
| This dataset contains sample mass spectrometry data and peptide database for demonstrating the Specollate/ProteoRift search pipeline. | |
| ## Contents | |
| ### Raw Data | |
| **Spectra Files (MGF format):** | |
| - `1DLC012615QE_RRAG_006B_rep2.mgf` - Sample MS/MS spectra | |
| - `1DLC012615QE_RRAG_014B_rep1.mgf` - Sample MS/MS spectra | |
| **Peptide Database:** | |
| - `human-peptidome-subset.fasta` - Subset of human peptide sequences | |
| ### Preprocessed Data (Optional) | |
| - `specs.pkl` - Preprocessed spectra ready for search | |
| - Metadata files for quick demo runs | |