keyword stringclasses 7
values | repo_name stringlengths 8 98 | file_path stringlengths 4 244 | file_extension stringclasses 29
values | file_size int64 0 84.1M | line_count int64 0 1.6M | content stringlengths 1 84.1M ⌀ | language stringclasses 14
values |
|---|---|---|---|---|---|---|---|
3D | febiosoftware/FEBio | FECore/fecore_type.cpp | .cpp | 1,781 | 49 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FELinearConstraint.h | .h | 3,331 | 115 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FECoreTask.cpp | .cpp | 1,577 | 41 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEDomainParameter.cpp | .cpp | 1,607 | 51 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FaceDataRecord.h | .h | 2,293 | 64 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/ElementDataRecord.h | .h | 1,969 | 62 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FECore.h | .h | 1,751 | 46 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FEDataMathGenerator.cpp | .cpp | 2,838 | 98 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/version.h | .h | 2,005 | 43 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/expint_Ei.h | .h | 1,375 | 30 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2020 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obt... | Unknown |
3D | febiosoftware/FEBio | FECore/FELogNodeData.h | .h | 1,616 | 42 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2025 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FEModelLoad.h | .h | 2,466 | 71 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FENormalProjection.cpp | .cpp | 6,715 | 219 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEPlotDataStore.h | .h | 2,588 | 78 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FEBroydenStrategy.cpp | .cpp | 8,294 | 304 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/MMatrix.cpp | .cpp | 8,815 | 333 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FENewtonStrategy.h | .h | 3,016 | 87 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FESPRProjection.h | .h | 2,093 | 57 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/MathObject.h | .h | 4,067 | 120 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/JFNKStrategy.h | .h | 2,513 | 73 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/units.h | .h | 3,724 | 110 | /*This file is part of the FEBio Studio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio-Studio.txt for details.
Copyright (c) 2020 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any pers... | Unknown |
3D | febiosoftware/FEBio | FECore/DumpMemStream.h | .h | 2,402 | 64 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/Timer.h | .h | 3,755 | 133 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FEFacetSet.cpp | .cpp | 4,242 | 148 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEModelParam.cpp | .cpp | 6,185 | 290 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/BSpline.h | .h | 2,632 | 79 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2020 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obt... | Unknown |
3D | febiosoftware/FEBio | FECore/FEPeriodicLinearConstraint.cpp | .cpp | 7,473 | 284 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/MObj2String.h | .h | 2,193 | 58 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/tens6d.h | .h | 4,144 | 107 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/vector.h | .h | 3,672 | 78 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FESurfaceMap.h | .h | 3,662 | 109 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FEPointFunction.cpp | .cpp | 6,634 | 223 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEModel.h | .h | 12,177 | 475 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FEFullNewtonStrategy.h | .h | 1,974 | 53 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/fecore_api.h | .h | 1,521 | 44 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FEGlobalData.h | .h | 1,713 | 44 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FENodeSet.cpp | .cpp | 3,021 | 98 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/MObj2String.cpp | .cpp | 8,865 | 279 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEElement.cpp | .cpp | 17,465 | 590 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FECoreFactory.cpp | .cpp | 2,517 | 74 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FESurfacePairConstraint.cpp | .cpp | 1,507 | 36 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEElementList.h | .h | 2,229 | 74 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/vector.cpp | .cpp | 5,472 | 209 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEGlobalMatrix.h | .h | 5,999 | 174 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/CompactSymmMatrix.h | .h | 3,110 | 90 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FEElement.h | .h | 11,213 | 361 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/svd.cpp | .cpp | 6,304 | 284 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEMergedConstraint.cpp | .cpp | 3,217 | 110 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEValuator.cpp | .cpp | 1,691 | 43 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/MathObject.cpp | .cpp | 8,627 | 295 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEModelComponent.cpp | .cpp | 3,833 | 124 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEPrescribedDOF.h | .h | 2,050 | 59 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/tens3dls.hpp | .hpp | 5,786 | 202 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | Unknown |
3D | febiosoftware/FEBio | FECore/FEDataArray.cpp | .cpp | 4,211 | 155 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FENodeNodeList.cpp | .cpp | 7,278 | 350 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FEItemList.cpp | .cpp | 2,630 | 105 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | febiosoftware/FEBio | FECore/FELogElementVolume.cpp | .cpp | 1,832 | 49 | /*This file is part of the FEBio source code and is licensed under the MIT license
listed below.
See Copyright-FEBio.txt for details.
Copyright (c) 2021 University of Utah, The Trustees of Columbia University in
the City of New York, and others.
Permission is hereby granted, free of charge, to any person obtaining a... | C++ |
3D | YellProgram/Yell | documentation/reference.md | .md | 58,596 | 1,328 | Yell Reference
=====
Refers to the program version Yell 1.0
Latest manual update: February 6th, 2014
[TOC]
Installation
=========
Yell is distributed as a self-contained executable. Just copy it in a folder where the shell can find it. Instructions for building the binary from the source files will be added later.
... | Markdown |
3D | YellProgram/Yell | src/OutputHandler.cpp | .cpp | 725 | 21 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | C++ |
3D | YellProgram/Yell | src/diffuser_core.h | .h | 15,393 | 549 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | Unknown |
3D | YellProgram/Yell | src/FormulaParser.h | .h | 1,986 | 71 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | Unknown |
3D | YellProgram/Yell | src/exceptions.h | .h | 241 | 17 | //
// Created by Arkadiy on 19/02/2016.
//
#ifndef YELL_EXCEPTIONS_H
#define YELL_EXCEPTIONS_H
class TerminateProgram : std::exception {
public:
TerminateProgram() {}
~TerminateProgram() throw() {}
};
#endif //YELL_EXCEPTIONS_H
| Unknown |
3D | YellProgram/Yell | src/InputFileParser.cpp | .cpp | 7,391 | 225 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | C++ |
3D | YellProgram/Yell | src/InputFileParserI.cpp | .cpp | 4,022 | 102 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | C++ |
3D | YellProgram/Yell | src/basic_classes.h | .h | 52,162 | 1,694 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | Unknown |
3D | YellProgram/Yell | src/basic_classes.cpp | .cpp | 16,084 | 545 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any l... | C++ |
3D | YellProgram/Yell | src/model.cpp | .cpp | 6,029 | 185 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | C++ |
3D | YellProgram/Yell | src/diffuser_core.cpp | .cpp | 6,505 | 212 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | C++ |
3D | YellProgram/Yell | src/InputFileParserII.cpp | .cpp | 1,886 | 53 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | C++ |
3D | YellProgram/Yell | src/basic_io.cpp | .cpp | 1,022 | 39 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | C++ |
3D | YellProgram/Yell | src/main.cpp | .cpp | 12,004 | 332 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | C++ |
3D | YellProgram/Yell | src/precompiled_header.h | .h | 1,413 | 41 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | Unknown |
3D | YellProgram/Yell | src/test_diffuser.h | .h | 95,823 | 2,542 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | Unknown |
3D | YellProgram/Yell | src/basic_io.h | .h | 1,036 | 34 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | Unknown |
3D | YellProgram/Yell | src/InputFileParserIII.cpp | .cpp | 3,797 | 82 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | C++ |
3D | YellProgram/Yell | src/OutputHandler.h | .h | 2,874 | 116 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | Unknown |
3D | YellProgram/Yell | src/InputFileParser.h | .h | 5,667 | 134 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | Unknown |
3D | YellProgram/Yell | src/FormulaParser.cpp | .cpp | 3,594 | 95 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | C++ |
3D | YellProgram/Yell | src/model.h | .h | 12,529 | 413 | /*
Copyright Arkadiy Simonov, Thomas Weber, ETH Zurich 2014
This file is part of Yell.
Yell is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later ... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/omptbx/omp_or_stubs.h | .h | 214 | 13 | #ifndef OMPTBX_WRAPPER_H
#define OMPTBX_WRAPPER_H
#if defined(_OPENMP)
# define OMPTBX_HAVE_OMP_H
# include <omp.h>
#else
# define OMPTBX_HAVE_STUBS_H
# include <omptbx/stubs.h>
#endif
#endif // OMPTBX_WRAPPER_H
| Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/omptbx/stubs.h | .h | 1,124 | 92 | #ifndef OMPTBX_STUBS_H
#define OMPTBX_STUBS_H
#if !defined(_OPENMP)
#ifdef __cplusplus
extern "C"
{
#endif
typedef int omp_lock_t;
typedef struct
{
int owner;
int count;
} omp_nest_lock_t;
void
omp_set_num_threads(int num_threads);
int
omp_get_num_threads(void);
int
omp_get_max_threads(void);
int
omp_get_th... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/omptbx/stubs.cpp | .cpp | 3,693 | 217 | #if !defined(_OPENMP)
#include <stdexcept>
#include <stdio.h>
#include <stdlib.h>
#include <omptbx/stubs.h>
extern "C" {
void
omp_set_num_threads(int num_threads)
{
}
int
omp_get_num_threads(void)
{
return 1;
}
int
omp_get_max_threads(void)
{
return 1;
}
int
omp_get_thread_num(void)
{
return 0;
}
int
omp_g... | C++ |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/vec3.h | .h | 16,941 | 737 | #ifndef SCITBX_VEC3_H
#define SCITBX_VEC3_H
#include <scitbx/array_family/tiny.h>
#include <scitbx/array_family/operator_traits_builtin.h>
#include <boost/optional.hpp>
namespace scitbx {
//! Three-dimensional vector.
/*! This class can be used to represent points, vectors, normals
or even colors. The usua... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/type_holder.h | .h | 197 | 11 | #ifndef SCITBX_TYPE_HOLDER_H
#define SCITBX_TYPE_HOLDER_H
namespace scitbx {
template <class T> struct type_holder { typedef T type; };
} // namespace scitbx
#endif // SCITBX_TYPE_HOLDER_H
| Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/error_utils.h | .h | 4,754 | 170 | #ifndef SCITBX_ERROR_UTILS_H
#define SCITBX_ERROR_UTILS_H
#include <sstream>
#include <string>
#include <exception>
#include <stdexcept>
#ifdef _MSC_VER
# pragma warning(disable:4355)
#endif
namespace scitbx {
//! Exception which can plug into the SCITBX_ERROR_UTILS_ASSERT trickery
/*!
This class is aimed a... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/rational.h | .h | 1,732 | 74 | #ifndef SCITBX_RATIONAL_H
#define SCITBX_RATIONAL_H
#include <boost/rational.hpp>
#include <string>
#include <cstdio>
namespace scitbx {
//! Formatting of rational numbers.
template <typename IntType>
std::string
format(
boost::rational<IntType> const& v,
bool decimal=false)
{
if (v.numerator()... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/constants.h | .h | 1,867 | 60 | /*! \file
General purpose mathematical or physical %constants.
*/
#ifndef SCITBX_CONSTANTS_H
#define SCITBX_CONSTANTS_H
#include <cmath>
namespace scitbx {
//! General purpose mathematical or physical %constants.
namespace constants {
//! mathematical constant pi
static const double pi = 4. * std::... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/mat3.h | .h | 25,139 | 989 | #ifndef SCITBX_MAT3_H
#define SCITBX_MAT3_H
#include <utility>
#include <scitbx/error.h>
#include <scitbx/vec3.h>
#include <scitbx/array_family/tiny_reductions.h>
namespace scitbx {
// forward declaration
template <typename NumType>
class sym_mat3;
//! Matrix class (3x3).
/*! This class represents a 3x3 m... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/auto_array.h | .h | 2,517 | 108 | #ifndef SCITBX_AUTO_ARRAY_H
#define SCITBX_AUTO_ARRAY_H
// Modified (Ralf W. Grosse-Kunstleve) copy of boost/scoped_array.hpp
// Original copyright:
// (C) Copyright Greg Colvin and Beman Dawes 1998, 1999.
// Copyright (c) 2001, 2002 Peter Dimov
//
// Distributed under the Boost Software License, Version 1.0. (See... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/sym_mat3.h | .h | 22,179 | 846 | #ifndef SCITBX_SYM_MAT3_H
#define SCITBX_SYM_MAT3_H
#include <scitbx/mat3.h>
namespace scitbx {
static const std::size_t sym_mat3_storage_mapping[] = {0,3,4,
3,1,5,
4,5,2};
//! Symmetric 3x3 matrix c... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/error.h | .h | 2,350 | 80 | /* *****************************************************
THIS IS AN AUTOMATICALLY GENERATED FILE. DO NOT EDIT.
*****************************************************
Generated by:
scitbx.generate_error_h
*/
/*! \file
Declarations and macros for exception handling.
*/
#ifndef SCITBX_ERROR_H
#define... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/math/utils.h | .h | 3,883 | 162 | #ifndef SCITBX_MATH_UTILS_H
#define SCITBX_MATH_UTILS_H
#include <cmath>
#include <algorithm>
#include <limits>
#include <complex>
namespace scitbx { namespace math {
template <typename NumType1, typename NumType2>
inline
NumType1&
update_min(NumType1& m, NumType2 const& x)
{
if (m > x) m = x;
retu... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/math/traits.h | .h | 292 | 21 | #ifndef SCITBX_MATH_ABS_H
#define SCITBX_MATH_ABS_H
#include <complex>
namespace scitbx { namespace math {
template <class T>
struct abs_traits {
typedef T result_type;
};
template <class T>
struct abs_traits< std::complex<T> > {
typedef T result_type;
};
}}
#endif
| Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/math/gcd.h | .h | 4,361 | 196 | #ifndef SCITBX_MATH_GCD_H
#define SCITBX_MATH_GCD_H
#if defined(__GNUC__) && (defined(__i386__) || defined(__x86_64__)) \
&& (!defined(__clang__)) \
&& (defined(__APPLE_CC__) && __APPLE_CC__ >= 5465) // OS X 10.5
# define SCITBX_MATH_GCD_USING_ASM
#endif
namespace scitbx { namespace math {
inline
int
gcd_int... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/math/modulo.h | .h | 771 | 44 | #ifndef SCITBX_MATH_MOD_H
#define SCITBX_MATH_MOD_H
#include <cmath>
namespace scitbx { namespace math {
template <typename IntType>
inline
IntType
mod_positive(IntType ix, IntType const& iy)
{
if (iy > 0) {
ix %= iy;
if (ix < 0) ix += iy;
}
return ix;
}
template <typename IntT... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/math/erf.h | .h | 1,326 | 61 | #ifndef SCITBX_MATH_ERF_H
#define SCITBX_MATH_ERF_H
#include <scitbx/math/erf/engine.h>
#include <scitbx/array_family/shared.h>
#include <scitbx/array_family/ref.h>
namespace scitbx { namespace math {
//! Approximate values for erf(x).
/*! See also: scitbx::math::erf_engine
*/
template <typename FloatType>
... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/math/approx_equal.h | .h | 2,548 | 79 | #ifndef SCITBX_MATH_APPROX_EQUAL_H
#define SCITBX_MATH_APPROX_EQUAL_H
#include <algorithm>
#include <cmath>
#include <scitbx/math/traits.h>
#include <limits>
namespace scitbx { namespace math {
/** \brief A functor testing whether the relative error
between two floating point values is smaller than some tolera... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/math/compile_time.h | .h | 562 | 27 | #ifndef SCITBX_MATH_COMPILE_TIME_H
#define SCITBX_MATH_COMPILE_TIME_H
#include <cstddef>
namespace scitbx { namespace math { namespace compile_time {
template <std::size_t N>
struct product
{
template <typename IndexType>
static std::size_t
get(IndexType const& i) { return i[N-1] * product<N-1>::ge... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/math/unimodular_generator.h | .h | 3,378 | 123 | #ifndef SCITBX_MATH_UNIMODULAR_GENERATOR_H
#define SCITBX_MATH_UNIMODULAR_GENERATOR_H
#include <scitbx/mat3.h>
namespace scitbx { namespace math {
template <typename IntType>
class unimodular_generator
{
private:
IntType range_;
bool at_end_;
unsigned return_target_id_;
IntType i0, ... | Unknown |
3D | YellProgram/Yell | lib/cctbx_stubs/scitbx/math/gaussian/term.h | .h | 2,657 | 106 | #ifndef SCITBX_MATH_GAUSSIAN_TERM_H
#define SCITBX_MATH_GAUSSIAN_TERM_H
#include <scitbx/math/erf.h>
#include <scitbx/constants.h>
#include <cmath>
namespace scitbx { namespace math { namespace gaussian {
//! Gaussian term: a Exp[-b x^2]
template <typename FloatType=double>
struct term
{
//! Default cons... | Unknown |
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