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7 values
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29 values
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stringclasses
14 values
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/DBoundingBox.cpp
.cpp
490
16
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: $ // ----------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp
.cpp
2,985
130
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/ToolDescription.cpp
.cpp
3,561
104
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow, Mathias Walzer $ // ---------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/DateTime.cpp
.cpp
7,503
320
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Nico Pfeifer $ // ---------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp
.cpp
514
16
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer $ // $Authors: $ // ------------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/MatchedIterator.cpp
.cpp
445
17
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/ParamValue.cpp
.cpp
21,355
822
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Authors: Ruben Grünberg $ // -------------------------------------------------------------------------- #i...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/LPWrapper.cpp
.cpp
24,250
805
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Alexandra Zerck $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/DPosition.cpp
.cpp
578
19
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/MassExplainer.cpp
.cpp
11,168
372
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/Compomer.cpp
.cpp
10,386
358
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/DRange.cpp
.cpp
472
16
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/DataValue.cpp
.cpp
25,599
936
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/ConstRefVector.cpp
.cpp
658
18
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: $ // ----------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/GridFeature.cpp
.cpp
1,763
76
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Steffen Sass, Hendrik Weisser $ // -----------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/Date.cpp
.cpp
1,805
83
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/openms/source/DATASTRUCTURES/OSWData.cpp
.cpp
4,397
129
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/topp/ProteomicsLFQTestScripts/run_fast.sh
.sh
1,047
17
#!/bin/bash ./bin/ProteomicsLFQ -in ../share/OpenMS/examples/FRACTIONS/BSA1_F1.mzML ../share/OpenMS/examples/FRACTIONS/BSA1_F2.mzML ../share/OpenMS/examples/FRACTIONS/BSA2_F1.mzML \ ../share/OpenMS/examples/FRACTIONS/BSA2_F2.mzML ../share/OpenMS/examples/FRACTIONS/BSA3_F1.mzML ../share/OpenMS/examples/FRACTIONS/BSA3_F2...
Shell
3D
OpenMS/OpenMS
src/tests/topp/ProteomicsLFQTestScripts/run_BSA.sh
.sh
1,865
39
#!/bin/bash export PATH="$PATH:/Users/pfeuffer/git/OpenMS-inference-src/cmake-build-debug/bin" export PATH="$PATH:/Users/pfeuffer/git/THIRDPARTY/MacOS/64bit/percolator" export MSGF_PATH="/Users/pfeuffer/git/THIRDPARTY/All/MSGFPlus/MSGFPlus.jar" #input data export DATA_PATH="/Users/pfeuffer/git/OpenMS-inference-src/sha...
Shell
3D
OpenMS/OpenMS
src/tests/topp/ProteomicsLFQTestScripts/run_lfq.sh
.sh
3,175
52
#!bin/bash export PATH="$PATH:/home/sachsenb/OpenMS/openms-build-tmp/bin" export PATH="$PATH:/home/sachsenb/OpenMS/THIRDPARTY/Linux/64bit/Percolator" export MSGF_PATH="/home/sachsenb/OpenMS/THIRDPARTY/All/MSGFPlus/MSGFPlus.jar" #input data export DATA_PATH="/home/sachsenb/OpenMS/openms-build/yasset_iPRG2015" # perfo...
Shell
3D
OpenMS/OpenMS
src/tests/external/ExampleLibraryFile.h
.h
630
28
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/tests/external/ExampleLibraryFile.cpp
.cpp
1,061
38
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/external/TestExternalCode.cpp
.cpp
1,082
37
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms_gui/include/GUI/TSGDialog_test.h
.h
1,352
59
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Tom Waschischeck $ // $Authors: Tom Waschischeck $ // -----------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/tests/class_tests/openms_gui/include/GUI/TOPPView_test.h
.h
2,800
98
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
Unknown
3D
OpenMS/OpenMS
src/tests/class_tests/openms_gui/source/FileWatcher_test.cpp
.cpp
1,247
48
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // ----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms_gui/source/GUIHelpers_test.cpp
.cpp
1,463
52
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms_gui/source/MultiGradient_test.cpp
.cpp
10,179
293
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms_gui/source/AxisTickCalculator_test.cpp
.cpp
1,899
63
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms_gui/source/GUI/TOPPView_test.cpp
.cpp
4,522
130
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms_gui/source/GUI/TSGDialog_test.cpp
.cpp
17,083
436
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Tom Waschischeck $ // $Authors: Tom Waschischeck $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openswathalgo/Scoring_test.cpp
.cpp
16,547
460
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openswathalgo/DiaHelpers_test.cpp
.cpp
1,675
60
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Witold Wolski $ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openswathalgo/SwathMap_test.cpp
.cpp
2,064
61
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Joshua Charkow$ // $Authors: Joshua Charkow$ // ----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openswathalgo/Datastructures_test.cpp
.cpp
3,412
107
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openswathalgo/TestConvert.cpp
.cpp
1,143
38
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Witold Wolski $ // --------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/IsotopeLabelingMDVs_test.cpp
.cpp
32,286
670
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Ahmed Khalil $ // $Authors: Ahmed Khalil $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/SignalToNoiseEstimatorMeanIterative_test.cpp
.cpp
3,084
107
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: $ // -------------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/CVTermListInterface_test.cpp
.cpp
12,958
333
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/Product_test.cpp
.cpp
5,342
195
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // ----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/AccurateMassSearchEngine_test.cpp
.cpp
15,376
417
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Erhan Kenar, Chris Bielow $ // ---------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/CompleteLinkage_test.cpp
.cpp
3,560
130
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer$ // $Authors: $ // ------------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/SVOutStream_test.cpp
.cpp
5,125
179
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Hendrik Weisser $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/FeatureFinderAlgorithmPicked_test.cpp
.cpp
3,234
95
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/MQEvidenceExporter_test.cpp
.cpp
3,643
94
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow$ // $Authors: Valentin Noske, Vincent Musch$ // ----------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/Instrument_test.cpp
.cpp
9,724
336
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // ----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/PeakPickerMobilogram_test.cpp
.cpp
4,328
89
// Copyright (c) 2002-present, The OpenMS Team -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Justin Sing $ // $Authors: Justin Sing $ // ----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/DecoyGenerator_test.cpp
.cpp
4,757
108
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Timo Sachsenberg $ // ----------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/PeakIndex_test.cpp
.cpp
4,289
191
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/ChromatogramExtractorAlgorithm_test.cpp
.cpp
21,953
534
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/MathFunctions_test.cpp
.cpp
7,613
222
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm, Chris Bielow $ // ----------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/DateTime_test.cpp
.cpp
7,822
331
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Nico Pfeifer $ // --------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/TransformationModelInterpolated_test.cpp
.cpp
5,884
177
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: $ // $Authors: Hendrik Weisser, Stephan Aiche $ // --------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/NLargest_test.cpp
.cpp
4,930
170
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer $ // $Authors: Andreas Bertsch $ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/IDMergerAlgorithm_test.cpp
.cpp
7,902
202
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Julianus Pfeuffer $ // $Authors: Julianus Pfeuffer $ // ---------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/ConsensusIDAlgorithmRanks_test.cpp
.cpp
4,138
136
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Marc Sturm, Andreas Bertsch, Sven Nahnsen, Hendrik Weisser $ // ...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/ZlibCompression_test.cpp
.cpp
7,132
167
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/OnDiscMSExperiment_test.cpp
.cpp
18,618
506
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/PepXMLFile_test.cpp
.cpp
21,934
502
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow, Hendrik Weisser $ // $Authors: Chris Bielow, Hendrik Weisser $ // ---------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/ProteaseDigestion_test.cpp
.cpp
43,865
717
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Marc Sturm, Chris Bielow, Jeremi Maciejewski $ // -----------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/ConsensusMapNormalizerAlgorithmThreshold_test.cpp
.cpp
1,618
56
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Lars Nilse$ // $Authors: Hendrik Brauer, Oliver Kohlbacher, Johannes Junker$ // --------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/PeptideMass_test.cpp
.cpp
2,105
71
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/NuXLModificationsGenerator_test.cpp
.cpp
1,415
51
// Copyright (c) 2002-present, The OpenMS Team -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: $ // $Authors: $ // ----------------------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/ModifiedPeptideGenerator_test.cpp
.cpp
14,237
297
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Timo Sachsenberg$ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/FragmentMassError_test.cpp
.cpp
17,009
404
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Swenja Wagner, Patricia Scheil $ // -------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/OPXLHelper_test.cpp
.cpp
24,737
503
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Eugen Netz $ // $Authors: Eugen Netz $ // -----------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/BasicProteinInferenceAlgorithm_test.cpp
.cpp
10,877
219
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Julianus Pfeuffer $ // $Authors: Julianus Pfeuffer $ // ---------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/MRMBatchFeatureSelector_test.cpp
.cpp
994
29
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $ // $Authors: Douglas McCloskey, Pasquale Domen...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/GridFeature_test.cpp
.cpp
3,023
120
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Hendrik Weisser $ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/MRMFeatureQCFile_test.cpp
.cpp
25,337
612
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $ // $Authors: Douglas McCloskey, Pasquale Dome...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/PeptideAndProteinQuant_test.cpp
.cpp
14,731
380
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hendrik Weisser $ // $Authors: Hendrik Weisser $ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/MRMDecoy_test.cpp
.cpp
47,409
1,288
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: George Rosenberger $ // $Authors: George Rosenberger, Hannes Roest, Witold Wolski $ // --------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/Bzip2Ifstream_test.cpp
.cpp
3,414
111
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: David Wojnar $ // ---------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/SequestInfile_test.cpp
.cpp
22,319
575
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Martin Langwisch $ // ----------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/AbsoluteQuantitationMethod_test.cpp
.cpp
6,550
221
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $ // $Authors: Douglas McCloskey, Pasquale Domen...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/OpenSwathSpectrumAccessOpenMS_test.cpp
.cpp
10,080
346
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: George Rosenberger $ // $Authors: George Rosenberger, Hannes Roest, Witold Wolski $ // --------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/ModificationsDB_test.cpp
.cpp
12,305
337
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/Deisotoper_test.cpp
.cpp
12,475
348
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Andreas Bertsch $ // -----------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/FLASHDeconvFeatureFile_test.cpp
.cpp
8,732
256
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Kyowon Jeong $ // $Authors: Kyowon Jeong $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/Peak2D_test.cpp
.cpp
16,689
618
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Marc Sturm $ // -----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/PosteriorErrorProbabilityModel_test.cpp
.cpp
11,569
333
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: David Wojnar$ // ---------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/NASequence_test.cpp
.cpp
26,907
848
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Samuel Wein $ // $Authors: Timo Sachsenberg, Samuel Wein $ // ---------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/MorphologicalFilter_test.cpp
.cpp
22,268
680
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: $ // ----------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/InterpolationModel_test.cpp
.cpp
6,530
270
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: $ // ---------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/FIAMSDataProcessor_test.cpp
.cpp
6,510
190
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Svetlana Kutuzova, Douglas McCloskey $ // ---------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/OpenSwathDataAccessHelper_test.cpp
.cpp
9,805
312
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Witold Wolski, Hannes Roest, $ // ---------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/RealMassDecomposer_test.cpp
.cpp
2,500
102
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Stephan Aiche $ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/SwathFileConsumer_test.cpp
.cpp
19,529
594
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Hannes Roest $ // $Authors: Hannes Roest $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/SpectrumSettings_test.cpp
.cpp
17,189
562
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: Marc Sturm $ // ----------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/ConsensusFeature_test.cpp
.cpp
19,049
676
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg $ // $Authors: $ // ----------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/NuXLParameterParsing_test.cpp
.cpp
18,335
549
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Timo Sachsenberg$ // -------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/Precursor_test.cpp
.cpp
16,735
524
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Mathias Walzer $ // $Authors: Marc Sturm $ // ------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/ExperimentalDesign_test.cpp
.cpp
23,235
569
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Timo Sachsenberg$ // $Authors: Timo Sachsenberg$ // ------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/PeptideEvidence_test.cpp
.cpp
2,235
135
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: $ // $Authors: $ // --------------------------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/INIUpdater_test.cpp
.cpp
2,619
102
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Chris Bielow $ // -------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/PeakPickerIterative_test.cpp
.cpp
1,525
69
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: $ // $Authors: $ // --------------------------------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/SiriusFragmentAnnotation_test.cpp
.cpp
5,222
110
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Oliver Alka $ // $Authors: Oliver Alka $ // ---------------------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/IMDataConverter_test.cpp
.cpp
8,797
268
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Eugen Netz $ // $Authors: Eugen Netz, Chris Bielow $ // ---------------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/Ms2IdentificationRate_test.cpp
.cpp
9,031
269
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: Chris Bielow $ // $Authors: Swenja Wagner, Patricia Scheil $ // -------------------------------...
C++
3D
OpenMS/OpenMS
src/tests/class_tests/openms/source/RANSACModelLinear_test.cpp
.cpp
19,784
429
// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin // SPDX-License-Identifier: BSD-3-Clause // // -------------------------------------------------------------------------- // $Maintainer: George Rosenberger $ // $Authors: George Rosenberger, Hannes Roest, Chris Bielow $ // --------...
C++