keyword stringclasses 7
values | repo_name stringlengths 8 98 | file_path stringlengths 4 244 | file_extension stringclasses 29
values | file_size int64 0 84.1M | line_count int64 0 1.6M | content stringlengths 1 84.1M ⌀ | language stringclasses 14
values |
|---|---|---|---|---|---|---|---|
3D | OpenMS/OpenMS | src/openms/source/QC/TIC.cpp | .cpp | 3,155 | 106 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Tom Waschischeck $
// ---------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/QC/MQEvidenceExporter.cpp | .cpp | 12,696 | 326 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow$
// $Authors: Valentin Noske, Vincent Musch$
// ----------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/QC/IdentificationSummary.cpp | .cpp | 3,812 | 108 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Axel Walter $
// $Authors: Axel Walter $
// ---------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/QC/PeptideMass.cpp | .cpp | 1,061 | 39 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/QC/MQExporterHelper.cpp | .cpp | 10,802 | 269 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow$
// $Authors: Virginia Rossow, Lenny Kovac, Hendrik Beschorner$
// ---------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/InstrumentSettings.cpp | .cpp | 3,590 | 126 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/ProteinHit.cpp | .cpp | 4,849 | 201 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: $
// ----------------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/SourceFile.cpp | .cpp | 3,163 | 139 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/SpectrumLookup.cpp | .cpp | 7,518 | 255 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hendrik Weisser $
// $Authors: Hendrik Weisser $
// -------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/AcquisitionInfo.cpp | .cpp | 1,040 | 40 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/SpectrumNativeIDParser.cpp | .cpp | 7,722 | 201 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Hendrik Weisser, Timo Sachsenberg $
// ------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/Instrument.cpp | .cpp | 3,918 | 169 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/MassAnalyzer.cpp | .cpp | 12,939 | 423 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/CVTerm.cpp | .cpp | 2,067 | 103 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Andreas Bertsch $
// ------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/MetaInfoDescription.cpp | .cpp | 4,040 | 138 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/DocumentIdentifier.cpp | .cpp | 1,918 | 81 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: $
// --------------------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/Software.cpp | .cpp | 1,298 | 63 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/CVTermList.cpp | .cpp | 2,359 | 93 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Mathias Walzer $
// $Authors: Andreas Bertsch, Mathias Walzer $
// ----------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/DataArrays.cpp | .cpp | 417 | 15 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Andreas Bertsch $
// ------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/HPLC.cpp | .cpp | 2,185 | 124 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/Gradient.cpp | .cpp | 5,468 | 205 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/ProteinIdentification.cpp | .cpp | 32,496 | 932 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Nico Pfeifer, Chris Bielow $
// -----------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/Sample.cpp | .cpp | 4,611 | 213 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/AnnotatedMSRun.cpp | .cpp | 1,727 | 65 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg$
// $Authors: David Voigt, Timo Sachsenberg $
// -----------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/Acquisition.cpp | .cpp | 875 | 38 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/Product.cpp | .cpp | 1,223 | 61 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/IonDetector.cpp | .cpp | 5,031 | 166 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/ProteinModificationSummary.cpp | .cpp | 791 | 23 | // Copyright (c) 2002-present, The OpenMS Team -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Timo Sachsenberg $
// -------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/PeptideIdentification.cpp | .cpp | 9,086 | 310 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: $
// ----------------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/ExperimentalSettings.cpp | .cpp | 3,440 | 152 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/SpectrumSettings.cpp | .cpp | 6,834 | 245 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/SpectrumMetaDataLookup.cpp | .cpp | 12,306 | 365 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hendrik Weisser $
// $Authors: Hendrik Weisser $
// -------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/PeptideHit.cpp | .cpp | 12,876 | 459 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: $
// ----------------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/IonSource.cpp | .cpp | 7,184 | 188 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/ChromatogramSettings.cpp | .cpp | 5,490 | 192 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Andreas Bertsch $
// ------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/DataProcessing.cpp | .cpp | 3,990 | 140 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/Precursor.cpp | .cpp | 9,526 | 315 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Mathias Walzer $
// $Authors: Marc Sturm $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/PeptideEvidence.cpp | .cpp | 3,019 | 140 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Timo Sachsenberg $
// -----------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/PeptideIdentificationList.cpp | .cpp | 432 | 14 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Timo Sachsenberg $
// -----------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/MetaInfoInterface.cpp | .cpp | 5,644 | 272 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/ExperimentalDesign.cpp | .cpp | 30,176 | 853 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Timo Sachsenberg $
// -----------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/CVTermListInterface.cpp | .cpp | 4,208 | 177 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hannes Roest $
// $Authors: Hannes Roest $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/AnnotatedMSRun.h | .h | 8,489 | 285 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg$
// $Authors: David Voigt $
// -----------------------------------------------... | Unknown |
3D | OpenMS/OpenMS | src/openms/source/METADATA/ScanWindow.cpp | .cpp | 731 | 30 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp | .cpp | 4,656 | 119 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $
// $Authors: Douglas McCloskey, Pasquale Domen... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/MetaInfoRegistry.cpp | .cpp | 8,629 | 305 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hendrik Weisser $
// $Authors: Marc Sturm, Hendrik Weisser $
// -------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/ContactPerson.cpp | .cpp | 2,554 | 127 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/MetaInfo.cpp | .cpp | 5,079 | 194 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/ID/IdentifiedMolecule.cpp | .cpp | 3,620 | 122 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hendrik Weisser $
// $Authors: Hendrik Weisser $
// -------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/ID/IdentificationDataConverter.cpp | .cpp | 52,824 | 1,369 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hendrik Weisser $
// $Authors: Hendrik Weisser $
// -------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/METADATA/ID/IdentificationData.cpp | .cpp | 51,728 | 1,427 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hendrik Weisser $
// $Authors: Hendrik Weisser $
// -------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/SYSTEM/File.cpp | .cpp | 28,183 | 970 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Andreas Bertsch, Chris Bielow, Marc Sturm $
// --------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/SYSTEM/BuildInfo.cpp | .cpp | 1,214 | 55 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/SYSTEM/UpdateCheck.cpp | .cpp | 5,600 | 168 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Timo Sachsenberg $
// -----------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/SYSTEM/RWrapper.cpp | .cpp | 4,400 | 144 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/SYSTEM/ExternalProcess.cpp | .cpp | 4,732 | 158 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/SYSTEM/StopWatch.cpp | .cpp | 10,588 | 357 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Marc Sturm, Chris Bielow $
// -------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/SYSTEM/SysInfo.cpp | .cpp | 6,518 | 232 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/SYSTEM/PythonInfo.cpp | .cpp | 3,792 | 104 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/SYSTEM/JavaInfo.cpp | .cpp | 2,806 | 71 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Timo Sachsenberg, Chris Bielow $
// ---------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/SYSTEM/NetworkGetRequest.cpp | .cpp | 2,348 | 95 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Timo Sachsenberg $
// -----------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/FileHandler.cpp | .cpp | 43,025 | 1,448 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/IdXMLFile.cpp | .cpp | 37,384 | 1,077 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/CompressedInputSource.cpp | .cpp | 4,583 | 142 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: David Wojnar $
// ---------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/FASTAFile.cpp | .cpp | 7,736 | 314 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow, Nora Wild $
// --------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/MSNumpressCoder.cpp | .cpp | 11,144 | 373 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hannes Roest $
// $Authors: Hannes Roest $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/ProtXMLFile.cpp | .cpp | 10,006 | 274 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/SqliteConnector.cpp | .cpp | 10,931 | 325 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hannes Roest $
// $Authors: Hannes Roest $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp | .cpp | 2,345 | 61 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $
// $Authors: Douglas McCloskey, Pasquale Domen... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/PepXMLFileMascot.cpp | .cpp | 6,349 | 209 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Nico Pfeifer $
// ---------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/MzTab.cpp | .cpp | 116,938 | 3,175 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Timo Sachsenberg $
// -----------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/ParamCWLFile.cpp | .cpp | 11,362 | 330 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Authors: Simon Gene Gottlieb $
// -------------------------------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/OMSSACSVFile.cpp | .cpp | 3,020 | 102 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: $
// ----------------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/ExperimentalDesignFile.cpp | .cpp | 16,827 | 466 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Timo Sachsenberg, Lukas Zimmermann $
// -----------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/UnimodXMLFile.cpp | .cpp | 921 | 36 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Andreas Bertsch $
// ------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/FLASHDeconvSpectrumFile.cpp | .cpp | 22,729 | 614 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Kyowon Jeong$
// $Authors: Kyowon Jeong $
// --------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/ToolDescriptionFile.cpp | .cpp | 1,235 | 38 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// ------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/EDTAFile.cpp | .cpp | 10,442 | 334 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/MzQCFile.cpp | .cpp | 9,982 | 279 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Axel Walter $
// $Authors: Axel Walter $
// ---------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/OMSSAXMLFile.cpp | .cpp | 11,732 | 401 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Andreas Bertsch $
// ------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/MRMFeaturePickerFile.cpp | .cpp | 5,112 | 137 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Douglas McCloskey, Pasquale Domenico Colaianni $
// $Authors: Douglas McCloskey, Pasquale Domen... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/IndentedStream.cpp | .cpp | 2,523 | 74 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/GNPSQuantificationFile.cpp | .cpp | 3,668 | 83 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Axel Walter $
// $Authors: Axel Walter $
// ---------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/InspectInfile.cpp | .cpp | 15,494 | 501 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: $
// ----------------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/OMSFile.cpp | .cpp | 2,008 | 72 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hendrik Weisser $
// $Authors: Hendrik Weisser $
// -------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/CachedMzML.cpp | .cpp | 3,875 | 118 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hannes Roest $
// $Authors: Hannes Roest $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/OMSFileLoad.cpp | .cpp | 44,940 | 1,175 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hendrik Weisser $
// $Authors: Hendrik Weisser, Chris Bielow $
// -----------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/TransformationXMLFile.cpp | .cpp | 5,858 | 184 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: $
// ----------------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/PTMXMLFile.cpp | .cpp | 986 | 34 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: $
// ----------------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/TriqlerFile.cpp | .cpp | 15,560 | 398 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Timo Sachsenberg, Lukas Heumos $
// ---------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/SqMassFile.cpp | .cpp | 3,398 | 95 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hannes Roest $
// $Authors: Hannes Roest $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/XMassFile.cpp | .cpp | 508 | 19 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Guillaume Belz $
// -------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/PeakTypeEstimator.cpp | .cpp | 458 | 18 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// -------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/MzTabMFile.cpp | .cpp | 24,327 | 633 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Oliver Alka $
// $Authors: Oliver Alka $
// ---------------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/MzIdentMLFile.cpp | .cpp | 2,252 | 61 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Mathias Walzer $
// $Authors: Andreas Bertsch, Mathias Walzer$
// -----------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/XTandemInfile.cpp | .cpp | 30,374 | 717 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Andreas Bertsch, Chris Bielow $
// --------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/OMSFileStore.cpp | .cpp | 69,137 | 1,599 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hendrik Weisser $
// $Authors: Hendrik Weisser, Chris Bielow $
// -----------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/CsvFile.cpp | .cpp | 2,170 | 91 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: David Wojnar $
// ---------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/MzXMLFile.cpp | .cpp | 3,459 | 113 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// -----------------------------------------------... | C++ |
3D | OpenMS/OpenMS | src/openms/source/FORMAT/GNPSMGFFile.cpp | .cpp | 13,513 | 377 | // Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Dorrestein Lab - University of California San Diego - https://dorresteinlab.ucsd.edu/$
// $Auth... | C++ |
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